Multiple sequence alignment - TraesCS7B01G090600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G090600 chr7B 100.000 9976 0 0 1 9976 104771520 104761545 0.000000e+00 18423.0
1 TraesCS7B01G090600 chr7B 97.143 35 1 0 9023 9057 104762464 104762430 1.080000e-04 60.2
2 TraesCS7B01G090600 chr7B 97.143 35 1 0 9057 9091 104762498 104762464 1.080000e-04 60.2
3 TraesCS7B01G090600 chr7D 95.945 6733 173 34 2300 8974 139838885 139832195 0.000000e+00 10829.0
4 TraesCS7B01G090600 chr7D 87.279 1525 95 48 104 1599 139841126 139839672 0.000000e+00 1650.0
5 TraesCS7B01G090600 chr7D 91.117 698 35 7 1609 2304 139839593 139838921 0.000000e+00 920.0
6 TraesCS7B01G090600 chr7D 88.889 387 22 8 9057 9430 139831884 139831506 3.280000e-124 457.0
7 TraesCS7B01G090600 chr7D 84.118 340 20 15 9415 9723 139831474 139831138 2.110000e-76 298.0
8 TraesCS7B01G090600 chr7D 88.571 245 23 3 9736 9975 139830882 139830638 9.800000e-75 292.0
9 TraesCS7B01G090600 chr7D 92.593 108 8 0 1 108 139847291 139847184 1.340000e-33 156.0
10 TraesCS7B01G090600 chr7A 94.364 4631 198 28 4479 9057 139521093 139516474 0.000000e+00 7047.0
11 TraesCS7B01G090600 chr7A 94.645 2913 99 21 1605 4480 139524089 139521197 0.000000e+00 4462.0
12 TraesCS7B01G090600 chr7A 88.758 765 38 20 860 1603 139524903 139524166 0.000000e+00 893.0
13 TraesCS7B01G090600 chr7A 90.171 234 16 3 9746 9975 139470438 139470208 2.110000e-76 298.0
14 TraesCS7B01G090600 chr7A 80.087 462 43 17 17 447 139544977 139544534 2.110000e-76 298.0
15 TraesCS7B01G090600 chr5A 89.333 75 7 1 212 286 304459348 304459421 1.070000e-14 93.5
16 TraesCS7B01G090600 chr2B 93.478 46 1 1 644 687 26716011 26715966 6.470000e-07 67.6
17 TraesCS7B01G090600 chr2B 93.478 46 1 1 644 687 26749519 26749474 6.470000e-07 67.6
18 TraesCS7B01G090600 chr2B 93.182 44 2 1 652 694 18162767 18162724 8.370000e-06 63.9
19 TraesCS7B01G090600 chr6B 97.222 36 1 0 651 686 42749445 42749480 3.010000e-05 62.1
20 TraesCS7B01G090600 chr4A 97.059 34 1 0 653 686 740880626 740880659 3.890000e-04 58.4
21 TraesCS7B01G090600 chr3D 97.059 34 1 0 653 686 506698344 506698377 3.890000e-04 58.4
22 TraesCS7B01G090600 chr1D 90.909 44 2 2 644 686 355095211 355095169 3.890000e-04 58.4
23 TraesCS7B01G090600 chr1A 92.500 40 2 1 650 689 494429832 494429794 1.000000e-03 56.5
24 TraesCS7B01G090600 chr3A 100.000 29 0 0 257 285 688973608 688973636 5.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G090600 chr7B 104761545 104771520 9975 True 18423.000000 18423 100.000000 1 9976 1 chr7B.!!$R1 9975
1 TraesCS7B01G090600 chr7D 139830638 139841126 10488 True 2407.666667 10829 89.319833 104 9975 6 chr7D.!!$R2 9871
2 TraesCS7B01G090600 chr7A 139516474 139524903 8429 True 4134.000000 7047 92.589000 860 9057 3 chr7A.!!$R3 8197

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
814 838 0.032952 TACCACCAGTGAAGCACGAC 59.967 55.000 0.00 0.0 39.64 4.34 F
994 1019 0.035458 CAGAGTTCGTTTGCCCTCCT 59.965 55.000 0.00 0.0 0.00 3.69 F
995 1020 0.321996 AGAGTTCGTTTGCCCTCCTC 59.678 55.000 0.00 0.0 0.00 3.71 F
996 1021 0.673956 GAGTTCGTTTGCCCTCCTCC 60.674 60.000 0.00 0.0 0.00 4.30 F
1186 1214 0.846015 AATCCAGCCATGATTCGGGA 59.154 50.000 0.00 0.0 0.00 5.14 F
1277 1305 0.889186 ATTCGTGCTGGAGCGGTTTT 60.889 50.000 0.00 0.0 45.83 2.43 F
1688 1824 1.065126 GCTCCCACTTTACCTCAGCAT 60.065 52.381 0.00 0.0 0.00 3.79 F
3295 3481 1.410517 ACCATGCTCATCTGGTACTCG 59.589 52.381 0.00 0.0 43.91 4.18 F
3366 3552 0.737219 GGACAGCGTACGGTATGTCT 59.263 55.000 26.70 10.5 41.40 3.41 F
5010 5335 0.755686 CAGATGGGGGAGTAGCTGTC 59.244 60.000 0.00 0.0 0.00 3.51 F
6002 6330 0.461870 CCGACGATTGATGGGAAGCA 60.462 55.000 0.00 0.0 0.00 3.91 F
7994 8364 0.321564 CCGCCACTGGTGATCTGAAA 60.322 55.000 10.43 0.0 34.74 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2479 2662 0.598065 CCTGTAAACCACCTGCTTGC 59.402 55.000 0.00 0.00 0.00 4.01 R
2838 3022 1.070914 GAATTTTGGTTTTCCCCGCCA 59.929 47.619 0.00 0.00 39.73 5.69 R
2911 3096 5.376854 ACAACAAAATAGGCTAGCACTTG 57.623 39.130 18.24 13.26 0.00 3.16 R
3003 3188 7.655328 CAGGAAAATGCTAAACACAATGGTTAA 59.345 33.333 0.00 0.00 27.82 2.01 R
3188 3373 8.684386 TCTTTGACATAAAACATTAGGACACA 57.316 30.769 0.00 0.00 0.00 3.72 R
3277 3463 1.269988 CCCGAGTACCAGATGAGCATG 60.270 57.143 0.00 0.00 0.00 4.06 R
3343 3529 0.682209 ATACCGTACGCTGTCCAGGT 60.682 55.000 10.49 2.10 35.91 4.00 R
4219 4436 0.535780 TGAACAGAGCTGGCAAGTGG 60.536 55.000 0.00 0.00 34.19 4.00 R
5316 5644 1.294041 TGGTATCAACTCCATGCCCA 58.706 50.000 0.00 0.00 0.00 5.36 R
6063 6391 1.400846 GTCAGCAGAGCAACATGATGG 59.599 52.381 0.00 0.00 33.72 3.51 R
8000 8370 0.676782 GCAACAGGGTTGGCGACTAT 60.677 55.000 10.73 0.00 0.00 2.12 R
9937 10919 0.036388 CCCTGTCTTTTAGCCGAGCA 60.036 55.000 0.00 0.00 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.950877 CAAAGCGCGTAGAGAGAGG 58.049 57.895 8.43 0.00 0.00 3.69
21 22 1.658686 AAGCGCGTAGAGAGAGGTGG 61.659 60.000 8.43 0.00 0.00 4.61
22 23 2.408241 GCGCGTAGAGAGAGGTGGT 61.408 63.158 8.43 0.00 0.00 4.16
23 24 1.935327 GCGCGTAGAGAGAGGTGGTT 61.935 60.000 8.43 0.00 0.00 3.67
24 25 1.376543 CGCGTAGAGAGAGGTGGTTA 58.623 55.000 0.00 0.00 0.00 2.85
25 26 1.331138 CGCGTAGAGAGAGGTGGTTAG 59.669 57.143 0.00 0.00 0.00 2.34
26 27 2.641305 GCGTAGAGAGAGGTGGTTAGA 58.359 52.381 0.00 0.00 0.00 2.10
27 28 3.015327 GCGTAGAGAGAGGTGGTTAGAA 58.985 50.000 0.00 0.00 0.00 2.10
28 29 3.442977 GCGTAGAGAGAGGTGGTTAGAAA 59.557 47.826 0.00 0.00 0.00 2.52
30 31 5.566230 GCGTAGAGAGAGGTGGTTAGAAAAA 60.566 44.000 0.00 0.00 0.00 1.94
54 55 9.936759 AAAAGGAAACTGATGTTTTAAACTTCA 57.063 25.926 20.15 20.15 45.36 3.02
73 74 7.900782 ACTTCAGCGTTTATTATAACACTGT 57.099 32.000 0.00 0.00 38.61 3.55
74 75 7.960793 ACTTCAGCGTTTATTATAACACTGTC 58.039 34.615 0.00 0.00 38.61 3.51
75 76 7.601130 ACTTCAGCGTTTATTATAACACTGTCA 59.399 33.333 0.00 0.00 38.61 3.58
76 77 7.520119 TCAGCGTTTATTATAACACTGTCAG 57.480 36.000 0.00 0.00 38.61 3.51
77 78 7.317390 TCAGCGTTTATTATAACACTGTCAGA 58.683 34.615 6.91 0.00 38.61 3.27
78 79 7.979537 TCAGCGTTTATTATAACACTGTCAGAT 59.020 33.333 6.91 0.00 38.61 2.90
79 80 8.604035 CAGCGTTTATTATAACACTGTCAGATT 58.396 33.333 6.91 3.22 34.86 2.40
80 81 8.604035 AGCGTTTATTATAACACTGTCAGATTG 58.396 33.333 6.91 0.00 0.00 2.67
81 82 8.600625 GCGTTTATTATAACACTGTCAGATTGA 58.399 33.333 6.91 0.00 0.00 2.57
83 84 9.922305 GTTTATTATAACACTGTCAGATTGAGC 57.078 33.333 6.91 0.00 0.00 4.26
84 85 9.890629 TTTATTATAACACTGTCAGATTGAGCT 57.109 29.630 6.91 0.00 0.00 4.09
85 86 7.783090 ATTATAACACTGTCAGATTGAGCTG 57.217 36.000 6.91 0.00 37.24 4.24
86 87 3.758755 AACACTGTCAGATTGAGCTGA 57.241 42.857 6.91 0.00 42.31 4.26
87 88 3.977134 ACACTGTCAGATTGAGCTGAT 57.023 42.857 6.91 0.00 45.75 2.90
88 89 4.283363 ACACTGTCAGATTGAGCTGATT 57.717 40.909 6.91 0.00 45.75 2.57
89 90 4.649692 ACACTGTCAGATTGAGCTGATTT 58.350 39.130 6.91 0.00 45.75 2.17
90 91 5.068636 ACACTGTCAGATTGAGCTGATTTT 58.931 37.500 6.91 0.00 45.75 1.82
91 92 6.233434 ACACTGTCAGATTGAGCTGATTTTA 58.767 36.000 6.91 0.00 45.75 1.52
92 93 6.370994 ACACTGTCAGATTGAGCTGATTTTAG 59.629 38.462 6.91 2.71 45.75 1.85
93 94 5.879223 ACTGTCAGATTGAGCTGATTTTAGG 59.121 40.000 6.91 0.00 45.75 2.69
94 95 6.053632 TGTCAGATTGAGCTGATTTTAGGA 57.946 37.500 1.96 0.00 45.75 2.94
95 96 6.475504 TGTCAGATTGAGCTGATTTTAGGAA 58.524 36.000 1.96 0.00 45.75 3.36
96 97 6.942005 TGTCAGATTGAGCTGATTTTAGGAAA 59.058 34.615 1.96 0.00 45.75 3.13
97 98 7.613022 TGTCAGATTGAGCTGATTTTAGGAAAT 59.387 33.333 1.96 0.00 45.75 2.17
98 99 7.914346 GTCAGATTGAGCTGATTTTAGGAAATG 59.086 37.037 1.96 0.00 45.75 2.32
99 100 7.613022 TCAGATTGAGCTGATTTTAGGAAATGT 59.387 33.333 0.00 0.00 39.84 2.71
100 101 7.701078 CAGATTGAGCTGATTTTAGGAAATGTG 59.299 37.037 0.00 0.00 38.14 3.21
101 102 6.899393 TTGAGCTGATTTTAGGAAATGTGT 57.101 33.333 0.00 0.00 35.65 3.72
102 103 6.500684 TGAGCTGATTTTAGGAAATGTGTC 57.499 37.500 0.00 0.00 35.65 3.67
179 180 7.054751 AGTTGAGGTTTATATTCCTAAGCACC 58.945 38.462 0.00 0.00 33.83 5.01
208 209 0.111061 TGTGGTTTGCTCTGCCTCAT 59.889 50.000 0.00 0.00 0.00 2.90
209 210 1.251251 GTGGTTTGCTCTGCCTCATT 58.749 50.000 0.00 0.00 0.00 2.57
212 213 4.199310 GTGGTTTGCTCTGCCTCATTATA 58.801 43.478 0.00 0.00 0.00 0.98
214 215 5.997746 GTGGTTTGCTCTGCCTCATTATATA 59.002 40.000 0.00 0.00 0.00 0.86
217 218 7.725397 TGGTTTGCTCTGCCTCATTATATATTT 59.275 33.333 0.00 0.00 0.00 1.40
219 220 9.971922 GTTTGCTCTGCCTCATTATATATTTTT 57.028 29.630 0.00 0.00 0.00 1.94
241 242 0.929244 AAATGGAGGATGACCCCTGG 59.071 55.000 0.00 0.00 36.49 4.45
252 253 2.479562 ACCCCTGGTCTTTGCATCT 58.520 52.632 0.00 0.00 0.00 2.90
253 254 0.038744 ACCCCTGGTCTTTGCATCTG 59.961 55.000 0.00 0.00 0.00 2.90
254 255 0.682209 CCCCTGGTCTTTGCATCTGG 60.682 60.000 0.00 0.00 0.00 3.86
255 256 1.318158 CCCTGGTCTTTGCATCTGGC 61.318 60.000 0.00 0.00 45.13 4.85
307 308 4.651045 TCTCTGCCTCAAATCTATAGTGCA 59.349 41.667 0.00 0.00 0.00 4.57
331 332 7.647318 GCAATTAAACAAATTTTGGTGGGAAAG 59.353 33.333 13.42 0.00 35.54 2.62
337 338 6.899089 ACAAATTTTGGTGGGAAAGAATCTT 58.101 32.000 13.42 0.00 34.12 2.40
399 417 6.723298 TCTTTTGGAACCTGCAAGAAATTA 57.277 33.333 0.00 0.00 34.07 1.40
429 447 9.987272 AAAATAAATAAATAATCAGCCTGCCTC 57.013 29.630 0.00 0.00 0.00 4.70
432 450 6.645790 AATAAATAATCAGCCTGCCTCTTG 57.354 37.500 0.00 0.00 0.00 3.02
444 462 2.430332 CTGCCTCTTGGAAACCAAACAA 59.570 45.455 4.78 0.00 43.44 2.83
445 463 3.037549 TGCCTCTTGGAAACCAAACAAT 58.962 40.909 4.78 0.00 43.44 2.71
465 483 5.410439 ACAATTCCAGCTTTGATCAAAATGC 59.590 36.000 20.82 20.11 0.00 3.56
483 501 1.078214 CCGTGGTCCTGCACATCAT 60.078 57.895 0.00 0.00 0.00 2.45
496 514 7.859377 GTCCTGCACATCATATTACAGAATTTG 59.141 37.037 0.00 0.00 0.00 2.32
535 553 6.633856 ACAGTAATTTTCTTGGAATGATGCC 58.366 36.000 0.00 0.00 0.00 4.40
539 557 3.530265 TTTCTTGGAATGATGCCATGC 57.470 42.857 0.00 0.00 34.90 4.06
555 573 2.607526 CCATGCGAATGACAAAACTGCA 60.608 45.455 4.44 0.00 35.10 4.41
556 574 3.247442 CATGCGAATGACAAAACTGCAT 58.753 40.909 0.00 0.00 41.83 3.96
568 586 6.017400 ACAAAACTGCATCTGATTTACTGG 57.983 37.500 0.00 0.00 0.00 4.00
610 628 3.282920 GGCCAGCGCTTCTATGCC 61.283 66.667 7.50 11.65 35.56 4.40
618 636 1.287730 CGCTTCTATGCCGCTGGATC 61.288 60.000 0.00 0.00 0.00 3.36
624 642 2.087462 TATGCCGCTGGATCCGAGTG 62.087 60.000 7.39 11.79 0.00 3.51
632 650 1.176619 TGGATCCGAGTGTCGTGTGT 61.177 55.000 7.39 0.00 38.40 3.72
640 658 3.562973 CCGAGTGTCGTGTGTATATAGGT 59.437 47.826 0.00 0.00 38.40 3.08
643 661 5.220719 CGAGTGTCGTGTGTATATAGGTCAA 60.221 44.000 0.00 0.00 34.72 3.18
644 662 6.132791 AGTGTCGTGTGTATATAGGTCAAG 57.867 41.667 0.00 0.00 0.00 3.02
647 665 7.031372 GTGTCGTGTGTATATAGGTCAAGAAA 58.969 38.462 0.00 0.00 0.00 2.52
648 666 7.008992 GTGTCGTGTGTATATAGGTCAAGAAAC 59.991 40.741 0.00 0.00 0.00 2.78
649 667 7.031372 GTCGTGTGTATATAGGTCAAGAAACA 58.969 38.462 0.00 0.00 0.00 2.83
650 668 7.705325 GTCGTGTGTATATAGGTCAAGAAACAT 59.295 37.037 0.00 0.00 0.00 2.71
652 670 8.328146 CGTGTGTATATAGGTCAAGAAACATTG 58.672 37.037 0.00 0.00 0.00 2.82
666 684 3.955771 AACATTGTTACCACGTGACAC 57.044 42.857 19.30 10.78 31.98 3.67
669 687 3.249799 ACATTGTTACCACGTGACACATG 59.750 43.478 19.30 18.68 31.98 3.21
681 699 3.667695 CGTGACACATGTGGTAAGCAATG 60.668 47.826 28.64 10.88 34.19 2.82
685 703 3.069300 ACACATGTGGTAAGCAATGCAAA 59.931 39.130 28.64 0.00 34.19 3.68
686 704 4.056740 CACATGTGGTAAGCAATGCAAAA 58.943 39.130 18.51 0.00 0.00 2.44
706 727 2.509052 AAAGAAAGGCCAAGAAACGC 57.491 45.000 5.01 0.00 0.00 4.84
709 730 0.110192 GAAAGGCCAAGAAACGCTCG 60.110 55.000 5.01 0.00 0.00 5.03
714 735 1.082756 CCAAGAAACGCTCGTGTGC 60.083 57.895 0.00 0.00 32.14 4.57
719 740 3.168237 AAACGCTCGTGTGCACAGC 62.168 57.895 22.40 19.29 34.45 4.40
727 748 1.713937 CGTGTGCACAGCAGTTTCCA 61.714 55.000 22.40 0.00 40.08 3.53
728 749 0.670162 GTGTGCACAGCAGTTTCCAT 59.330 50.000 22.40 0.00 40.08 3.41
729 750 1.067516 GTGTGCACAGCAGTTTCCATT 59.932 47.619 22.40 0.00 40.08 3.16
730 751 1.755959 TGTGCACAGCAGTTTCCATTT 59.244 42.857 17.42 0.00 40.08 2.32
732 753 2.796593 GTGCACAGCAGTTTCCATTTTC 59.203 45.455 13.17 0.00 40.08 2.29
735 756 3.492011 GCACAGCAGTTTCCATTTTCTTG 59.508 43.478 0.00 0.00 0.00 3.02
736 757 4.737352 GCACAGCAGTTTCCATTTTCTTGA 60.737 41.667 0.00 0.00 0.00 3.02
737 758 4.741676 CACAGCAGTTTCCATTTTCTTGAC 59.258 41.667 0.00 0.00 0.00 3.18
738 759 4.402155 ACAGCAGTTTCCATTTTCTTGACA 59.598 37.500 0.00 0.00 0.00 3.58
739 760 4.980434 CAGCAGTTTCCATTTTCTTGACAG 59.020 41.667 0.00 0.00 0.00 3.51
740 761 4.646492 AGCAGTTTCCATTTTCTTGACAGT 59.354 37.500 0.00 0.00 0.00 3.55
741 762 5.127682 AGCAGTTTCCATTTTCTTGACAGTT 59.872 36.000 0.00 0.00 0.00 3.16
743 764 7.014615 AGCAGTTTCCATTTTCTTGACAGTTAT 59.985 33.333 0.00 0.00 0.00 1.89
744 765 7.327032 GCAGTTTCCATTTTCTTGACAGTTATC 59.673 37.037 0.00 0.00 0.00 1.75
798 822 1.373121 GCGCGCTAATCCTCCTACC 60.373 63.158 26.67 0.00 0.00 3.18
800 824 0.318784 CGCGCTAATCCTCCTACCAC 60.319 60.000 5.56 0.00 0.00 4.16
801 825 0.033642 GCGCTAATCCTCCTACCACC 59.966 60.000 0.00 0.00 0.00 4.61
802 826 1.410004 CGCTAATCCTCCTACCACCA 58.590 55.000 0.00 0.00 0.00 4.17
803 827 1.341531 CGCTAATCCTCCTACCACCAG 59.658 57.143 0.00 0.00 0.00 4.00
804 828 2.399580 GCTAATCCTCCTACCACCAGT 58.600 52.381 0.00 0.00 0.00 4.00
805 829 2.103263 GCTAATCCTCCTACCACCAGTG 59.897 54.545 0.00 0.00 0.00 3.66
806 830 2.642171 AATCCTCCTACCACCAGTGA 57.358 50.000 0.00 0.00 0.00 3.41
808 832 1.938585 TCCTCCTACCACCAGTGAAG 58.061 55.000 0.00 0.00 0.00 3.02
809 833 0.250513 CCTCCTACCACCAGTGAAGC 59.749 60.000 0.00 0.00 0.00 3.86
810 834 0.976641 CTCCTACCACCAGTGAAGCA 59.023 55.000 0.00 0.00 0.00 3.91
811 835 0.685097 TCCTACCACCAGTGAAGCAC 59.315 55.000 0.00 0.00 34.10 4.40
812 836 0.670546 CCTACCACCAGTGAAGCACG 60.671 60.000 0.00 0.00 39.64 5.34
813 837 0.317160 CTACCACCAGTGAAGCACGA 59.683 55.000 0.00 0.00 39.64 4.35
814 838 0.032952 TACCACCAGTGAAGCACGAC 59.967 55.000 0.00 0.00 39.64 4.34
815 839 2.310233 CCACCAGTGAAGCACGACG 61.310 63.158 0.00 0.00 39.64 5.12
816 840 2.661866 ACCAGTGAAGCACGACGC 60.662 61.111 0.00 0.00 39.64 5.19
817 841 2.661537 CCAGTGAAGCACGACGCA 60.662 61.111 0.00 0.00 46.13 5.24
818 842 2.546321 CAGTGAAGCACGACGCAC 59.454 61.111 0.00 0.00 46.13 5.34
819 843 2.661866 AGTGAAGCACGACGCACC 60.662 61.111 0.00 0.00 46.13 5.01
820 844 4.059459 GTGAAGCACGACGCACCG 62.059 66.667 0.00 0.00 46.13 4.94
821 845 4.578898 TGAAGCACGACGCACCGT 62.579 61.111 0.00 0.00 46.13 4.83
822 846 3.335534 GAAGCACGACGCACCGTT 61.336 61.111 0.00 0.00 46.13 4.44
823 847 2.877974 GAAGCACGACGCACCGTTT 61.878 57.895 0.00 0.00 46.13 3.60
824 848 2.743871 GAAGCACGACGCACCGTTTC 62.744 60.000 0.00 0.00 46.13 2.78
825 849 4.364409 GCACGACGCACCGTTTCC 62.364 66.667 0.00 0.00 41.37 3.13
826 850 2.962786 CACGACGCACCGTTTCCA 60.963 61.111 0.00 0.00 41.37 3.53
827 851 2.963320 ACGACGCACCGTTTCCAC 60.963 61.111 0.00 0.00 41.37 4.02
828 852 4.054455 CGACGCACCGTTTCCACG 62.054 66.667 0.00 0.00 46.71 4.94
837 861 3.362262 GTTTCCACGAAAGCCCCC 58.638 61.111 0.00 0.00 31.87 5.40
838 862 2.281900 TTTCCACGAAAGCCCCCG 60.282 61.111 0.00 0.00 0.00 5.73
856 880 2.038269 GCAAAACGCTCGATCCCCA 61.038 57.895 0.00 0.00 37.77 4.96
869 893 1.921869 ATCCCCACCGTCCATTCACC 61.922 60.000 0.00 0.00 0.00 4.02
875 899 1.377202 CCGTCCATTCACCCCACAG 60.377 63.158 0.00 0.00 0.00 3.66
876 900 1.377202 CGTCCATTCACCCCACAGG 60.377 63.158 0.00 0.00 43.78 4.00
879 903 2.440147 CATTCACCCCACAGGCCA 59.560 61.111 5.01 0.00 40.58 5.36
884 908 2.532715 ACCCCACAGGCCACATCT 60.533 61.111 5.01 0.00 40.58 2.90
886 910 2.273449 CCCACAGGCCACATCTCC 59.727 66.667 5.01 0.00 0.00 3.71
893 917 2.125106 GCCACATCTCCACGGTCC 60.125 66.667 0.00 0.00 0.00 4.46
937 961 4.394712 CACGGCCACCTCCCTGAC 62.395 72.222 2.24 0.00 0.00 3.51
938 962 4.640690 ACGGCCACCTCCCTGACT 62.641 66.667 2.24 0.00 0.00 3.41
982 1007 3.470567 CGCGACGCCACAGAGTTC 61.471 66.667 15.34 0.00 0.00 3.01
983 1008 3.470567 GCGACGCCACAGAGTTCG 61.471 66.667 9.14 0.00 0.00 3.95
985 1010 1.660575 CGACGCCACAGAGTTCGTT 60.661 57.895 0.00 0.00 35.12 3.85
986 1011 1.213094 CGACGCCACAGAGTTCGTTT 61.213 55.000 0.00 0.00 35.12 3.60
987 1012 0.232303 GACGCCACAGAGTTCGTTTG 59.768 55.000 0.00 0.00 35.12 2.93
988 1013 1.082756 CGCCACAGAGTTCGTTTGC 60.083 57.895 0.00 0.00 0.00 3.68
989 1014 1.282875 GCCACAGAGTTCGTTTGCC 59.717 57.895 0.00 0.00 0.00 4.52
990 1015 1.949257 CCACAGAGTTCGTTTGCCC 59.051 57.895 0.00 0.00 0.00 5.36
991 1016 0.535102 CCACAGAGTTCGTTTGCCCT 60.535 55.000 0.00 0.00 0.00 5.19
992 1017 0.868406 CACAGAGTTCGTTTGCCCTC 59.132 55.000 0.00 0.00 0.00 4.30
993 1018 0.250338 ACAGAGTTCGTTTGCCCTCC 60.250 55.000 0.00 0.00 0.00 4.30
994 1019 0.035458 CAGAGTTCGTTTGCCCTCCT 59.965 55.000 0.00 0.00 0.00 3.69
995 1020 0.321996 AGAGTTCGTTTGCCCTCCTC 59.678 55.000 0.00 0.00 0.00 3.71
996 1021 0.673956 GAGTTCGTTTGCCCTCCTCC 60.674 60.000 0.00 0.00 0.00 4.30
1160 1188 4.162690 ACAAGGATCGCCTCGGCC 62.163 66.667 1.72 0.00 46.28 6.13
1161 1189 4.161295 CAAGGATCGCCTCGGCCA 62.161 66.667 2.24 0.00 46.28 5.36
1186 1214 0.846015 AATCCAGCCATGATTCGGGA 59.154 50.000 0.00 0.00 0.00 5.14
1187 1215 1.070604 ATCCAGCCATGATTCGGGAT 58.929 50.000 0.00 1.47 33.45 3.85
1215 1243 5.639082 GCTTTGAGGTAATCCCATGTTTTTG 59.361 40.000 0.00 0.00 34.66 2.44
1277 1305 0.889186 ATTCGTGCTGGAGCGGTTTT 60.889 50.000 0.00 0.00 45.83 2.43
1311 1340 8.872845 CATTTTAGTCATTGGGCTGTATTTTTC 58.127 33.333 0.00 0.00 0.00 2.29
1338 1367 2.030958 GAATCCCGCGTCCACGTTT 61.031 57.895 4.92 0.00 42.22 3.60
1340 1369 1.847890 AATCCCGCGTCCACGTTTTG 61.848 55.000 4.92 0.00 42.22 2.44
1381 1410 9.932699 CATTATTTTGCTCACATTTTTGTGAAA 57.067 25.926 9.80 2.65 46.60 2.69
1394 1438 2.969628 TGTGAAATTTTGGGCGTTGT 57.030 40.000 0.00 0.00 0.00 3.32
1397 1441 3.130516 TGTGAAATTTTGGGCGTTGTACA 59.869 39.130 0.00 0.00 0.00 2.90
1453 1497 3.122948 CGTTAGTTCAGGGAACATTCGTG 59.877 47.826 11.28 0.00 44.11 4.35
1511 1555 2.024414 GGGTGCCACATTCATCCTTAC 58.976 52.381 0.00 0.00 32.04 2.34
1512 1556 2.620367 GGGTGCCACATTCATCCTTACA 60.620 50.000 0.00 0.00 32.04 2.41
1513 1557 3.290710 GGTGCCACATTCATCCTTACAT 58.709 45.455 0.00 0.00 0.00 2.29
1514 1558 3.067180 GGTGCCACATTCATCCTTACATG 59.933 47.826 0.00 0.00 0.00 3.21
1551 1595 2.309613 GTGCAATGCTGATAATGGGGA 58.690 47.619 6.82 0.00 0.00 4.81
1599 1643 2.812658 TCTCCTGCTGAGAGTGATTGA 58.187 47.619 2.84 0.00 45.29 2.57
1603 1647 3.326006 TCCTGCTGAGAGTGATTGACTTT 59.674 43.478 0.00 0.00 33.83 2.66
1604 1648 4.528206 TCCTGCTGAGAGTGATTGACTTTA 59.472 41.667 0.00 0.00 33.83 1.85
1605 1649 4.869297 CCTGCTGAGAGTGATTGACTTTAG 59.131 45.833 0.00 0.00 33.83 1.85
1607 1651 4.284490 TGCTGAGAGTGATTGACTTTAGGT 59.716 41.667 0.00 0.00 33.83 3.08
1617 1752 7.034397 GTGATTGACTTTAGGTCTACCACTAC 58.966 42.308 1.26 0.00 44.74 2.73
1684 1820 1.429930 TGTGCTCCCACTTTACCTCA 58.570 50.000 0.00 0.00 42.54 3.86
1688 1824 1.065126 GCTCCCACTTTACCTCAGCAT 60.065 52.381 0.00 0.00 0.00 3.79
1712 1848 2.905415 TTCTTCCCAGATGCCATGTT 57.095 45.000 0.00 0.00 0.00 2.71
1731 1867 5.492855 TGTTGGTAGGCATAGTGTTTACT 57.507 39.130 0.00 0.00 40.99 2.24
1733 1869 3.869065 TGGTAGGCATAGTGTTTACTGC 58.131 45.455 0.00 0.00 37.78 4.40
1734 1870 3.203716 GGTAGGCATAGTGTTTACTGCC 58.796 50.000 4.27 4.27 43.08 4.85
1738 1874 2.943033 GGCATAGTGTTTACTGCCGATT 59.057 45.455 0.00 0.00 36.59 3.34
1854 1991 9.401058 AGAAATGAATAATTAGCTGTAGTGCTT 57.599 29.630 0.00 0.00 43.74 3.91
1971 2108 1.873591 GACAGACATGTGGTGTTGGAC 59.126 52.381 1.15 0.00 42.36 4.02
1974 2111 1.490490 AGACATGTGGTGTTGGACTGT 59.510 47.619 1.15 0.00 42.36 3.55
2105 2242 5.794894 AGTGGGTAAACTGATGTGTAAGAG 58.205 41.667 0.00 0.00 0.00 2.85
2307 2445 7.767250 TGCTGTATAGTATGAGCACTTCTAT 57.233 36.000 12.41 0.00 36.54 1.98
2366 2541 6.756299 TTTGAAAGGCTTTCTTTTTGCAAT 57.244 29.167 33.01 0.39 45.00 3.56
2478 2661 5.721000 TCCTATGGCATGGAAAACAGAAAAT 59.279 36.000 12.93 0.00 0.00 1.82
2479 2662 5.813672 CCTATGGCATGGAAAACAGAAAATG 59.186 40.000 12.93 0.00 0.00 2.32
2562 2745 1.650242 TTTGGTGGTGGGAAGCTGGA 61.650 55.000 0.00 0.00 0.00 3.86
2732 2915 9.821662 AATTGTACTTTTATTTTGCTCTCGTAC 57.178 29.630 0.00 0.00 0.00 3.67
2747 2930 5.678871 GCTCTCGTACTGTGTAATGGAATGA 60.679 44.000 0.00 0.00 0.00 2.57
2838 3022 5.010617 GGAACACACTTGTTGAAATATGGGT 59.989 40.000 0.00 0.00 46.43 4.51
2917 3102 6.545504 TCTTCTTCTGTGAATAACAAGTGC 57.454 37.500 0.00 0.00 38.67 4.40
2939 3124 9.057089 AGTGCTAGCCTATTTTGTTGTATTATC 57.943 33.333 13.29 0.00 0.00 1.75
3188 3373 6.934056 TGCATATGCCAAAAGAATAAACACT 58.066 32.000 24.54 0.00 41.18 3.55
3208 3393 7.435068 ACACTGTGTCCTAATGTTTTATGTC 57.565 36.000 7.80 0.00 0.00 3.06
3211 3396 8.349245 CACTGTGTCCTAATGTTTTATGTCAAA 58.651 33.333 0.00 0.00 0.00 2.69
3212 3397 8.567948 ACTGTGTCCTAATGTTTTATGTCAAAG 58.432 33.333 0.00 0.00 0.00 2.77
3277 3463 5.934402 TTTACTGTTCCTAGGATGAGACC 57.066 43.478 13.57 0.00 0.00 3.85
3295 3481 1.410517 ACCATGCTCATCTGGTACTCG 59.589 52.381 0.00 0.00 43.91 4.18
3366 3552 0.737219 GGACAGCGTACGGTATGTCT 59.263 55.000 26.70 10.50 41.40 3.41
3440 3635 5.270893 TGGAAGGGTTTTCTGTTTTAAGC 57.729 39.130 0.00 0.00 0.00 3.09
3441 3636 4.712337 TGGAAGGGTTTTCTGTTTTAAGCA 59.288 37.500 0.00 0.00 0.00 3.91
3442 3637 5.365314 TGGAAGGGTTTTCTGTTTTAAGCAT 59.635 36.000 0.00 0.00 0.00 3.79
3456 3651 7.935520 TGTTTTAAGCATGATCAACTGTAACA 58.064 30.769 0.00 9.04 0.00 2.41
3457 3652 8.075574 TGTTTTAAGCATGATCAACTGTAACAG 58.924 33.333 0.00 0.00 37.52 3.16
3464 3659 6.017605 GCATGATCAACTGTAACAGGGATTAG 60.018 42.308 0.00 0.00 35.51 1.73
3490 3685 4.450082 AGTGCTCATGAACACGTATACA 57.550 40.909 20.49 0.00 41.72 2.29
3526 3721 5.531122 TTCATTAAGATAGACCGGGTCAG 57.469 43.478 27.87 7.01 34.60 3.51
3632 3827 9.350357 CATCTGTTGAACTGAAATAGGAAAATG 57.650 33.333 8.95 0.00 29.93 2.32
3758 3953 9.823647 TTTTTGTCAAATCATTGGCTTACTTAA 57.176 25.926 0.00 0.00 41.79 1.85
3778 3973 2.741145 ACCTACTGCCAAACCACAAAA 58.259 42.857 0.00 0.00 0.00 2.44
3792 3987 7.923344 CCAAACCACAAAATTACAATAGTGTGA 59.077 33.333 5.98 0.00 38.82 3.58
3824 4019 4.039366 GCTGATCTTCGGTAACCTATTCCT 59.961 45.833 0.00 0.00 0.00 3.36
3829 4024 4.957954 TCTTCGGTAACCTATTCCTGCTTA 59.042 41.667 0.00 0.00 0.00 3.09
3897 4092 7.814264 ATTTGATTCAATGCTACTCCTTAGG 57.186 36.000 0.00 0.00 0.00 2.69
3924 4119 2.031495 ACAAGACTTCCCTAGTGGCT 57.969 50.000 0.00 0.00 37.17 4.75
3971 4166 3.057946 GCTGTCTCCATTTGTTGAAGACC 60.058 47.826 0.00 0.00 0.00 3.85
3996 4191 6.592607 CGTATGAACAGTTACCATGTTTAGGT 59.407 38.462 0.00 0.00 40.86 3.08
3997 4192 7.118680 CGTATGAACAGTTACCATGTTTAGGTT 59.881 37.037 0.00 0.00 40.86 3.50
4013 4208 1.557443 GGTTGTCTGCACCGTTCTCG 61.557 60.000 0.00 0.00 0.00 4.04
4059 4254 2.479566 TCTAAAGCTGCTTCCCACAG 57.520 50.000 16.28 8.19 38.22 3.66
4219 4436 8.459635 ACTCCTCTTTTTATTTCGAAATTAGGC 58.540 33.333 27.10 0.00 0.00 3.93
4413 4630 6.016860 TCTGGTGTGTGAAATTCATCTCTTTG 60.017 38.462 0.00 0.00 0.00 2.77
4415 4632 6.096705 TGGTGTGTGAAATTCATCTCTTTGTT 59.903 34.615 0.00 0.00 0.00 2.83
4572 4894 4.744137 CAGATCTGCAAAGATAAGGACGAG 59.256 45.833 10.38 0.00 0.00 4.18
5010 5335 0.755686 CAGATGGGGGAGTAGCTGTC 59.244 60.000 0.00 0.00 0.00 3.51
5064 5392 3.003068 CAGTAAGTTCATGCAGCTATGGC 59.997 47.826 0.00 0.00 39.06 4.40
5316 5644 1.903183 GAAGAGTCAGGTGGTAGGCTT 59.097 52.381 0.00 0.00 0.00 4.35
5388 5716 9.927081 ACCTTGAGTGGAATTAATATTGAATCT 57.073 29.630 0.00 0.00 0.00 2.40
5574 5902 2.017049 GTATCATGTGGACCTTGGCAC 58.983 52.381 0.00 0.00 0.00 5.01
5699 6027 3.697045 GTGAGCTCTCTAAGAGGCTTACA 59.303 47.826 16.19 6.29 42.54 2.41
5708 6036 6.482641 TCTCTAAGAGGCTTACATACTGTACG 59.517 42.308 0.00 0.00 31.69 3.67
5739 6067 0.597568 GTGCTTGGCATACAGTTGCA 59.402 50.000 9.14 0.00 44.59 4.08
5919 6247 0.928229 GTGGCTATGACTTTACGGCG 59.072 55.000 4.80 4.80 0.00 6.46
6002 6330 0.461870 CCGACGATTGATGGGAAGCA 60.462 55.000 0.00 0.00 0.00 3.91
6029 6357 4.520492 CACTGTTGTTAAAGGGAGCATCTT 59.480 41.667 0.00 0.00 33.73 2.40
6063 6391 2.501723 TGAAGAGATAGCCTGTGGTTCC 59.498 50.000 0.00 0.00 0.00 3.62
6607 6935 6.097412 GGAATCATTCAAGCCTGAAGGTAAAT 59.903 38.462 9.36 0.00 44.68 1.40
6612 6940 4.755411 TCAAGCCTGAAGGTAAATACTCG 58.245 43.478 0.00 0.00 37.57 4.18
6666 6994 3.440522 CAGGAAACTTAAGCCTTGGTAGC 59.559 47.826 1.29 0.00 40.21 3.58
6730 7058 2.192175 CGGCATTACCCCTGTCCC 59.808 66.667 0.00 0.00 33.26 4.46
6804 7132 2.433838 CCAGACTCTGCCTGTGCG 60.434 66.667 0.00 0.00 41.78 5.34
6842 7170 9.334693 CAAAAATATGACTGAAGAAGTTGCTAC 57.665 33.333 0.00 0.00 40.07 3.58
6843 7171 8.621532 AAAATATGACTGAAGAAGTTGCTACA 57.378 30.769 0.13 0.00 40.07 2.74
6846 7174 9.890629 AATATGACTGAAGAAGTTGCTACATTA 57.109 29.630 0.13 0.00 40.07 1.90
6931 7259 1.404181 CCTGCGATCCTCGTTTCTTCA 60.404 52.381 0.00 0.00 42.81 3.02
7122 7458 2.826128 TCGTAGGTGAAAGAGCTGACAT 59.174 45.455 0.00 0.00 33.31 3.06
7251 7587 9.765295 AAGAAGTTATCAGTTCCCTTACTACTA 57.235 33.333 0.00 0.00 33.25 1.82
7356 7692 4.133796 GTTCCGCATTGGGCCAGC 62.134 66.667 6.23 7.06 40.31 4.85
7357 7693 4.675161 TTCCGCATTGGGCCAGCA 62.675 61.111 16.87 0.00 40.31 4.41
7435 7771 2.034939 CCTGCAAGTTGAAATGCTGACA 59.965 45.455 7.16 0.00 42.12 3.58
7547 7883 0.902531 TAGGTCCCAGCTAGTGCAAC 59.097 55.000 0.00 0.00 42.74 4.17
7665 8017 4.811969 TTCAGCTAATTTCGTGTCCCTA 57.188 40.909 0.00 0.00 0.00 3.53
7887 8239 2.917933 TCAACAGGTCTCAACAACTGG 58.082 47.619 0.00 0.00 35.34 4.00
7889 8241 0.839946 ACAGGTCTCAACAACTGGCT 59.160 50.000 0.00 0.00 35.34 4.75
7897 8249 3.388024 TCTCAACAACTGGCTAACTGACT 59.612 43.478 0.00 0.00 0.00 3.41
7900 8252 5.676552 TCAACAACTGGCTAACTGACTAAA 58.323 37.500 0.00 0.00 0.00 1.85
7927 8279 6.918022 CGAAATAAGAGAAAACAGCAAAAGGT 59.082 34.615 0.00 0.00 0.00 3.50
7946 8316 1.004277 GTACCAAGGCATCCAGGAACA 59.996 52.381 0.00 0.00 0.00 3.18
7964 8334 3.951775 ACAAACAGCAACAAGGTTTCA 57.048 38.095 0.00 0.00 32.79 2.69
7994 8364 0.321564 CCGCCACTGGTGATCTGAAA 60.322 55.000 10.43 0.00 34.74 2.69
8000 8370 4.136796 CCACTGGTGATCTGAAAAACTCA 58.863 43.478 1.93 0.00 0.00 3.41
8002 8372 5.939883 CCACTGGTGATCTGAAAAACTCATA 59.060 40.000 1.93 0.00 32.14 2.15
8038 8408 7.438160 CCTGTTGCAATCGATGTAATAGACTTA 59.562 37.037 0.59 0.00 42.68 2.24
8060 8430 4.891277 ATGGTTACTTCGTCGTTTAACG 57.109 40.909 11.60 11.60 44.19 3.18
8109 8480 5.350640 CAGAAGTATAACCGAAAGAACACCC 59.649 44.000 0.00 0.00 0.00 4.61
8181 8552 4.213564 AGGAAGTCATTTCTGCGAGAAT 57.786 40.909 0.00 0.00 33.67 2.40
8203 8574 5.766150 TCATTTGAACGATGTTTCAAGGT 57.234 34.783 0.00 0.00 44.33 3.50
8269 8640 2.426522 GGAACAGCATTGTAGCAGACA 58.573 47.619 0.00 0.00 36.23 3.41
8294 8665 1.948104 TGGACTGAACAGGTTGAACG 58.052 50.000 6.76 0.00 0.00 3.95
8358 8729 1.597027 CCTCAGGCGTGTCCGTTTT 60.597 57.895 6.26 0.00 40.77 2.43
8377 8750 6.649557 CCGTTTTAGGTATGGACATCTTATCC 59.350 42.308 0.00 0.00 36.70 2.59
8412 8786 6.712179 ACTCTACTTATACTCCTTTTCCCG 57.288 41.667 0.00 0.00 0.00 5.14
8423 8797 2.302445 TCCTTTTCCCGTCGTGGATTTA 59.698 45.455 3.68 0.00 42.00 1.40
8433 8807 5.054477 CCGTCGTGGATTTACCTATTGATT 58.946 41.667 0.00 0.00 42.00 2.57
8642 9016 7.064134 CGTAACTTCTTCTGGCAAATGTACATA 59.936 37.037 9.21 0.00 0.00 2.29
8894 9275 4.633175 TCATGTACGTAGTTGGCTGAAAA 58.367 39.130 0.00 0.00 37.78 2.29
8921 9302 6.356556 TCCATGTGAAATACTCGAATGGATT 58.643 36.000 5.73 0.00 40.87 3.01
8948 9329 7.040686 GGACTTGCTGGACTTGAAAGTAAATTA 60.041 37.037 0.00 0.00 39.88 1.40
8977 9358 1.691434 TCAGGTTGAAAAATGGTGGGC 59.309 47.619 0.00 0.00 0.00 5.36
8981 9362 2.813172 GGTTGAAAAATGGTGGGCAATG 59.187 45.455 0.00 0.00 0.00 2.82
8982 9363 2.813172 GTTGAAAAATGGTGGGCAATGG 59.187 45.455 0.00 0.00 0.00 3.16
8983 9364 2.053244 TGAAAAATGGTGGGCAATGGT 58.947 42.857 0.00 0.00 0.00 3.55
8986 9630 1.433121 AAATGGTGGGCAATGGTGTT 58.567 45.000 0.00 0.00 0.00 3.32
8999 9643 2.638480 TGGTGTTTTACTGCTCTGCT 57.362 45.000 0.00 0.00 0.00 4.24
9003 9647 4.202010 TGGTGTTTTACTGCTCTGCTTTTC 60.202 41.667 0.00 0.00 0.00 2.29
9005 9649 3.003275 TGTTTTACTGCTCTGCTTTTCGG 59.997 43.478 0.00 0.00 0.00 4.30
9022 9667 2.156098 TCGGCCGAAATGCTTAGTTTT 58.844 42.857 28.99 0.00 0.00 2.43
9023 9668 2.160813 TCGGCCGAAATGCTTAGTTTTC 59.839 45.455 28.99 1.51 0.00 2.29
9024 9669 2.095466 CGGCCGAAATGCTTAGTTTTCA 60.095 45.455 24.07 0.00 32.57 2.69
9025 9670 3.501950 GGCCGAAATGCTTAGTTTTCAG 58.498 45.455 0.00 1.69 32.57 3.02
9026 9671 3.501950 GCCGAAATGCTTAGTTTTCAGG 58.498 45.455 9.29 10.66 32.57 3.86
9027 9672 3.057526 GCCGAAATGCTTAGTTTTCAGGT 60.058 43.478 9.29 0.00 32.57 4.00
9028 9673 4.558697 GCCGAAATGCTTAGTTTTCAGGTT 60.559 41.667 9.29 0.00 32.57 3.50
9029 9674 5.154222 CCGAAATGCTTAGTTTTCAGGTTC 58.846 41.667 9.29 0.00 32.57 3.62
9030 9675 5.048713 CCGAAATGCTTAGTTTTCAGGTTCT 60.049 40.000 9.29 0.00 32.57 3.01
9031 9676 6.080406 CGAAATGCTTAGTTTTCAGGTTCTC 58.920 40.000 9.29 0.00 32.57 2.87
9032 9677 6.073003 CGAAATGCTTAGTTTTCAGGTTCTCT 60.073 38.462 9.29 0.00 32.57 3.10
9033 9678 6.566197 AATGCTTAGTTTTCAGGTTCTCTG 57.434 37.500 0.00 0.00 44.68 3.35
9043 9688 4.356405 TCAGGTTCTCTGAGCAATTCAA 57.644 40.909 0.00 0.00 46.71 2.69
9044 9689 4.321718 TCAGGTTCTCTGAGCAATTCAAG 58.678 43.478 0.00 0.00 46.71 3.02
9045 9690 4.040829 TCAGGTTCTCTGAGCAATTCAAGA 59.959 41.667 0.00 0.00 46.71 3.02
9046 9691 4.942483 CAGGTTCTCTGAGCAATTCAAGAT 59.058 41.667 0.00 0.00 46.18 2.40
9047 9692 5.415077 CAGGTTCTCTGAGCAATTCAAGATT 59.585 40.000 0.00 0.00 46.18 2.40
9048 9693 5.415077 AGGTTCTCTGAGCAATTCAAGATTG 59.585 40.000 0.00 0.00 34.81 2.67
9049 9694 9.893637 CAGGTTCTCTGAGCAATTCAAGATTGC 62.894 44.444 14.14 14.14 46.18 3.56
9055 9700 3.581024 GCAATTCAAGATTGCCTGTCA 57.419 42.857 11.59 0.00 46.21 3.58
9056 9701 4.119442 GCAATTCAAGATTGCCTGTCAT 57.881 40.909 11.59 0.00 46.21 3.06
9078 9723 4.321718 TCAGGTTCTCTGAGCAATTCAAG 58.678 43.478 0.00 0.00 46.71 3.02
9099 9744 5.125100 AGATTGCGTGTCATGATTTGTTT 57.875 34.783 0.00 0.00 0.00 2.83
9103 9748 3.171277 GCGTGTCATGATTTGTTTAGGC 58.829 45.455 0.00 0.00 0.00 3.93
9118 9763 6.757897 TGTTTAGGCAATGGTGAGATTTAG 57.242 37.500 0.00 0.00 0.00 1.85
9121 9766 2.243221 AGGCAATGGTGAGATTTAGGCT 59.757 45.455 0.00 0.00 0.00 4.58
9125 9770 4.521146 CAATGGTGAGATTTAGGCTGAGT 58.479 43.478 0.00 0.00 0.00 3.41
9126 9771 5.674525 CAATGGTGAGATTTAGGCTGAGTA 58.325 41.667 0.00 0.00 0.00 2.59
9138 9783 2.035193 AGGCTGAGTATATGCGTGACTG 59.965 50.000 0.37 0.00 0.00 3.51
9139 9784 2.398498 GCTGAGTATATGCGTGACTGG 58.602 52.381 0.37 0.00 0.00 4.00
9152 9797 2.675844 CGTGACTGGACTGTTTTTGTGA 59.324 45.455 0.00 0.00 0.00 3.58
9165 9812 6.258068 ACTGTTTTTGTGACTAGTGAGCTAAC 59.742 38.462 0.00 0.00 0.00 2.34
9172 9819 7.704578 TGTGACTAGTGAGCTAACTAAAGAT 57.295 36.000 12.23 0.00 32.35 2.40
9185 9832 8.404765 AGCTAACTAAAGATAAACTCGGTAGTC 58.595 37.037 0.00 0.00 33.75 2.59
9206 9853 5.028375 GTCGTTTGTCTTTTGTTCCTCTTG 58.972 41.667 0.00 0.00 0.00 3.02
9322 9969 2.614057 CCGTTGCATCATACTTCCTTCC 59.386 50.000 0.00 0.00 0.00 3.46
9326 9973 5.189180 GTTGCATCATACTTCCTTCCTTCT 58.811 41.667 0.00 0.00 0.00 2.85
9381 10038 8.396272 AGTCTAACATGTGCAAGTTTTTAGAT 57.604 30.769 0.00 0.00 0.00 1.98
9509 10215 6.791887 AGATGCATCTTATATTGTGGAACG 57.208 37.500 23.75 0.00 33.95 3.95
9510 10216 5.702670 AGATGCATCTTATATTGTGGAACGG 59.297 40.000 23.75 0.00 33.95 4.44
9511 10217 5.029807 TGCATCTTATATTGTGGAACGGA 57.970 39.130 0.00 0.00 42.39 4.69
9512 10218 5.432645 TGCATCTTATATTGTGGAACGGAA 58.567 37.500 0.00 0.00 42.39 4.30
9513 10219 5.527214 TGCATCTTATATTGTGGAACGGAAG 59.473 40.000 0.00 0.00 42.39 3.46
9514 10220 5.758296 GCATCTTATATTGTGGAACGGAAGA 59.242 40.000 0.00 0.00 42.39 2.87
9520 10226 1.133363 TGTGGAACGGAAGAAGGGAA 58.867 50.000 0.00 0.00 42.39 3.97
9525 10231 5.368523 TGTGGAACGGAAGAAGGGAATATAT 59.631 40.000 0.00 0.00 42.39 0.86
9562 10268 1.133513 TGCCAGTTTTCAGTGACCCAT 60.134 47.619 0.00 0.00 0.00 4.00
9585 10291 9.043079 CCATTGTATATGTATCTGCATCTCATC 57.957 37.037 0.00 0.00 0.00 2.92
9593 10299 5.543020 TGTATCTGCATCTCATCCTCTTCAT 59.457 40.000 0.00 0.00 0.00 2.57
9611 10317 5.934625 TCTTCATTCTAGCCTTTGAAGTGAC 59.065 40.000 16.43 0.00 43.45 3.67
9620 10326 2.146342 CTTTGAAGTGACGCCACATCT 58.854 47.619 8.51 0.00 45.54 2.90
9621 10327 2.254546 TTGAAGTGACGCCACATCTT 57.745 45.000 8.51 0.00 45.54 2.40
9624 10359 2.290367 TGAAGTGACGCCACATCTTTTG 59.710 45.455 8.51 0.00 45.54 2.44
9691 10426 3.012560 GCAGTGGCTTTCTCACAGT 57.987 52.632 0.00 0.00 37.58 3.55
9700 10435 2.421619 CTTTCTCACAGTGCTCCTTCC 58.578 52.381 0.00 0.00 0.00 3.46
9701 10436 0.687354 TTCTCACAGTGCTCCTTCCC 59.313 55.000 0.00 0.00 0.00 3.97
9723 10458 4.442706 CAGCCGTATGAAGAGTTTGGTAT 58.557 43.478 0.00 0.00 0.00 2.73
9725 10460 5.354234 CAGCCGTATGAAGAGTTTGGTATTT 59.646 40.000 0.00 0.00 0.00 1.40
9727 10462 5.585047 GCCGTATGAAGAGTTTGGTATTTCT 59.415 40.000 0.00 0.00 0.00 2.52
9728 10463 6.759827 GCCGTATGAAGAGTTTGGTATTTCTA 59.240 38.462 0.00 0.00 0.00 2.10
9729 10464 7.279313 GCCGTATGAAGAGTTTGGTATTTCTAA 59.721 37.037 0.00 0.00 0.00 2.10
9734 10469 8.458573 TGAAGAGTTTGGTATTTCTAAAAGCA 57.541 30.769 0.00 0.00 0.00 3.91
9768 10746 2.348591 CGTGGCTCGAGAAGAAACAAAC 60.349 50.000 18.75 0.00 42.86 2.93
9776 10754 6.420008 GCTCGAGAAGAAACAAACAAGTAGTA 59.580 38.462 18.75 0.00 0.00 1.82
9777 10755 7.567229 GCTCGAGAAGAAACAAACAAGTAGTAC 60.567 40.741 18.75 0.00 0.00 2.73
9780 10758 8.903723 CGAGAAGAAACAAACAAGTAGTACTAG 58.096 37.037 1.87 0.00 0.00 2.57
9783 10761 7.063934 AGAAACAAACAAGTAGTACTAGGCT 57.936 36.000 1.87 0.00 0.00 4.58
9787 10765 8.641498 AACAAACAAGTAGTACTAGGCTACTA 57.359 34.615 21.68 11.27 45.78 1.82
9795 10773 8.049655 AGTAGTACTAGGCTACTACACAAAAC 57.950 38.462 22.86 9.22 46.39 2.43
9800 10778 2.631545 AGGCTACTACACAAAACCGACT 59.368 45.455 0.00 0.00 0.00 4.18
9815 10793 1.332686 CCGACTGATCCATCGTACGAA 59.667 52.381 23.56 6.29 36.60 3.85
9820 10798 1.135527 TGATCCATCGTACGAACCCAC 59.864 52.381 23.56 13.94 0.00 4.61
9845 10823 2.417936 GGGCCTACGCAGCTCTAC 59.582 66.667 0.84 0.00 36.38 2.59
9847 10825 2.423898 GGCCTACGCAGCTCTACCA 61.424 63.158 0.00 0.00 36.38 3.25
9852 10830 1.954382 CTACGCAGCTCTACCACCATA 59.046 52.381 0.00 0.00 0.00 2.74
9854 10832 0.747255 CGCAGCTCTACCACCATACT 59.253 55.000 0.00 0.00 0.00 2.12
9857 10835 2.366916 GCAGCTCTACCACCATACTGAT 59.633 50.000 0.00 0.00 0.00 2.90
9862 10840 4.500545 GCTCTACCACCATACTGATCACTG 60.501 50.000 0.00 0.00 0.00 3.66
9896 10878 1.023502 TACGTATGATCACCGGCGAA 58.976 50.000 9.30 0.00 0.00 4.70
9937 10919 2.261671 CGCACTACAGTCGCCCTT 59.738 61.111 0.00 0.00 0.00 3.95
9954 10936 1.734465 CCTTGCTCGGCTAAAAGACAG 59.266 52.381 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.171455 ACCTCTCTCTACGCGCTTTG 59.829 55.000 5.73 0.00 0.00 2.77
1 2 0.171455 CACCTCTCTCTACGCGCTTT 59.829 55.000 5.73 0.00 0.00 3.51
2 3 1.658686 CCACCTCTCTCTACGCGCTT 61.659 60.000 5.73 0.00 0.00 4.68
3 4 2.115911 CCACCTCTCTCTACGCGCT 61.116 63.158 5.73 0.00 0.00 5.92
4 5 1.935327 AACCACCTCTCTCTACGCGC 61.935 60.000 5.73 0.00 0.00 6.86
5 6 1.331138 CTAACCACCTCTCTCTACGCG 59.669 57.143 3.53 3.53 0.00 6.01
28 29 9.936759 TGAAGTTTAAAACATCAGTTTCCTTTT 57.063 25.926 0.00 0.00 46.79 2.27
55 56 8.600625 TCAATCTGACAGTGTTATAATAAACGC 58.399 33.333 0.00 0.00 39.60 4.84
57 58 9.922305 GCTCAATCTGACAGTGTTATAATAAAC 57.078 33.333 0.00 0.00 0.00 2.01
58 59 9.890629 AGCTCAATCTGACAGTGTTATAATAAA 57.109 29.630 0.00 0.00 0.00 1.40
59 60 9.317936 CAGCTCAATCTGACAGTGTTATAATAA 57.682 33.333 0.00 0.00 36.19 1.40
60 61 8.695456 TCAGCTCAATCTGACAGTGTTATAATA 58.305 33.333 0.00 0.00 38.11 0.98
61 62 7.559486 TCAGCTCAATCTGACAGTGTTATAAT 58.441 34.615 0.00 0.00 38.11 1.28
62 63 6.935167 TCAGCTCAATCTGACAGTGTTATAA 58.065 36.000 0.00 0.00 38.11 0.98
63 64 6.530019 TCAGCTCAATCTGACAGTGTTATA 57.470 37.500 0.00 0.00 38.11 0.98
64 65 5.411831 TCAGCTCAATCTGACAGTGTTAT 57.588 39.130 0.00 0.00 38.11 1.89
65 66 4.871933 TCAGCTCAATCTGACAGTGTTA 57.128 40.909 0.00 0.00 38.11 2.41
66 67 3.758755 TCAGCTCAATCTGACAGTGTT 57.241 42.857 0.00 0.00 38.11 3.32
67 68 3.977134 ATCAGCTCAATCTGACAGTGT 57.023 42.857 0.00 0.00 44.88 3.55
68 69 5.624344 AAAATCAGCTCAATCTGACAGTG 57.376 39.130 1.59 0.00 44.88 3.66
69 70 5.879223 CCTAAAATCAGCTCAATCTGACAGT 59.121 40.000 1.59 0.00 44.88 3.55
70 71 6.111382 TCCTAAAATCAGCTCAATCTGACAG 58.889 40.000 0.00 0.00 44.88 3.51
71 72 6.053632 TCCTAAAATCAGCTCAATCTGACA 57.946 37.500 0.00 0.00 44.88 3.58
72 73 6.992063 TTCCTAAAATCAGCTCAATCTGAC 57.008 37.500 0.00 0.00 44.88 3.51
73 74 7.613022 ACATTTCCTAAAATCAGCTCAATCTGA 59.387 33.333 0.00 0.00 45.97 3.27
74 75 7.701078 CACATTTCCTAAAATCAGCTCAATCTG 59.299 37.037 0.00 0.00 32.69 2.90
75 76 7.395489 ACACATTTCCTAAAATCAGCTCAATCT 59.605 33.333 0.00 0.00 32.69 2.40
76 77 7.542025 ACACATTTCCTAAAATCAGCTCAATC 58.458 34.615 0.00 0.00 32.69 2.67
77 78 7.177216 TGACACATTTCCTAAAATCAGCTCAAT 59.823 33.333 0.00 0.00 32.69 2.57
78 79 6.489700 TGACACATTTCCTAAAATCAGCTCAA 59.510 34.615 0.00 0.00 32.69 3.02
79 80 6.003326 TGACACATTTCCTAAAATCAGCTCA 58.997 36.000 0.00 0.00 32.69 4.26
80 81 6.500684 TGACACATTTCCTAAAATCAGCTC 57.499 37.500 0.00 0.00 32.69 4.09
81 82 6.899393 TTGACACATTTCCTAAAATCAGCT 57.101 33.333 0.00 0.00 32.69 4.24
82 83 8.538409 AATTTGACACATTTCCTAAAATCAGC 57.462 30.769 0.00 0.00 32.69 4.26
118 119 7.119116 CAGCGGCTAAACACATATTTGGATATA 59.881 37.037 0.26 0.00 0.00 0.86
120 121 5.238432 CAGCGGCTAAACACATATTTGGATA 59.762 40.000 0.26 0.00 0.00 2.59
121 122 4.036734 CAGCGGCTAAACACATATTTGGAT 59.963 41.667 0.26 0.00 0.00 3.41
155 156 7.054751 AGGTGCTTAGGAATATAAACCTCAAC 58.945 38.462 4.66 1.61 37.68 3.18
179 180 3.129287 AGAGCAAACCACAACAGTGAAAG 59.871 43.478 0.00 0.00 35.24 2.62
217 218 3.077391 AGGGGTCATCCTCCATTTCAAAA 59.923 43.478 0.00 0.00 33.94 2.44
219 220 2.025037 CAGGGGTCATCCTCCATTTCAA 60.025 50.000 0.00 0.00 33.94 2.69
225 226 2.877384 ACCAGGGGTCATCCTCCA 59.123 61.111 0.00 0.00 33.94 3.86
241 242 3.911989 CATCGCCAGATGCAAAGAC 57.088 52.632 0.00 0.00 46.46 3.01
250 251 2.618442 TGATTGTATGCATCGCCAGA 57.382 45.000 0.19 0.00 0.00 3.86
251 252 3.909776 AATGATTGTATGCATCGCCAG 57.090 42.857 0.19 0.00 0.00 4.85
252 253 4.652421 AAAATGATTGTATGCATCGCCA 57.348 36.364 0.19 0.00 0.00 5.69
253 254 8.915871 ATAATAAAATGATTGTATGCATCGCC 57.084 30.769 0.19 0.00 0.00 5.54
307 308 9.467796 TTCTTTCCCACCAAAATTTGTTTAATT 57.532 25.926 4.92 0.00 38.08 1.40
318 319 4.100808 CCACAAGATTCTTTCCCACCAAAA 59.899 41.667 0.00 0.00 0.00 2.44
331 332 5.253330 TGATTACAAGGTCCCACAAGATTC 58.747 41.667 0.00 0.00 0.00 2.52
337 338 4.380843 AACATGATTACAAGGTCCCACA 57.619 40.909 0.00 0.00 0.00 4.17
383 401 6.843069 TTTTTGCTAATTTCTTGCAGGTTC 57.157 33.333 0.00 0.00 38.01 3.62
429 447 3.809279 GCTGGAATTGTTTGGTTTCCAAG 59.191 43.478 5.26 1.98 46.07 3.61
432 450 3.751479 AGCTGGAATTGTTTGGTTTCC 57.249 42.857 0.00 0.00 39.50 3.13
444 462 4.510571 GGCATTTTGATCAAAGCTGGAAT 58.489 39.130 23.74 11.93 0.00 3.01
445 463 3.614630 CGGCATTTTGATCAAAGCTGGAA 60.615 43.478 23.84 10.70 0.00 3.53
465 483 0.177836 TATGATGTGCAGGACCACGG 59.822 55.000 0.00 0.00 38.55 4.94
535 553 2.663808 TGCAGTTTTGTCATTCGCATG 58.336 42.857 0.00 0.00 0.00 4.06
539 557 4.408993 TCAGATGCAGTTTTGTCATTCG 57.591 40.909 0.00 0.00 0.00 3.34
555 573 2.540515 CGTGTCGCCAGTAAATCAGAT 58.459 47.619 0.00 0.00 0.00 2.90
556 574 1.990799 CGTGTCGCCAGTAAATCAGA 58.009 50.000 0.00 0.00 0.00 3.27
578 596 0.395448 TGGCCAAATGCATCCGATGA 60.395 50.000 12.79 0.00 43.89 2.92
584 602 2.567564 AAGCGCTGGCCAAATGCATC 62.568 55.000 12.58 10.36 43.89 3.91
610 628 2.278206 CGACACTCGGATCCAGCG 60.278 66.667 13.41 5.22 36.00 5.18
618 636 3.562973 ACCTATATACACACGACACTCGG 59.437 47.826 0.00 0.00 45.59 4.63
624 642 7.031372 TGTTTCTTGACCTATATACACACGAC 58.969 38.462 0.00 0.00 0.00 4.34
652 670 1.529438 CCACATGTGTCACGTGGTAAC 59.471 52.381 25.31 11.98 44.27 2.50
685 703 3.118775 AGCGTTTCTTGGCCTTTCTTTTT 60.119 39.130 3.32 0.00 0.00 1.94
686 704 2.430694 AGCGTTTCTTGGCCTTTCTTTT 59.569 40.909 3.32 0.00 0.00 2.27
690 711 0.110192 CGAGCGTTTCTTGGCCTTTC 60.110 55.000 3.32 0.00 0.00 2.62
694 715 2.251642 ACACGAGCGTTTCTTGGCC 61.252 57.895 0.00 0.00 29.71 5.36
706 727 0.041839 GAAACTGCTGTGCACACGAG 60.042 55.000 17.42 16.39 33.79 4.18
709 730 0.670162 ATGGAAACTGCTGTGCACAC 59.330 50.000 17.42 13.56 33.79 3.82
714 735 4.741676 GTCAAGAAAATGGAAACTGCTGTG 59.258 41.667 0.00 0.00 0.00 3.66
719 740 7.535258 CGATAACTGTCAAGAAAATGGAAACTG 59.465 37.037 0.00 0.00 0.00 3.16
735 756 7.987268 TTGTAATCTGATGACGATAACTGTC 57.013 36.000 0.80 0.00 36.88 3.51
736 757 7.009265 CGTTTGTAATCTGATGACGATAACTGT 59.991 37.037 0.80 0.00 0.00 3.55
737 758 7.009265 ACGTTTGTAATCTGATGACGATAACTG 59.991 37.037 13.65 10.11 33.67 3.16
738 759 7.033791 ACGTTTGTAATCTGATGACGATAACT 58.966 34.615 13.65 3.06 33.67 2.24
739 760 7.218145 ACGTTTGTAATCTGATGACGATAAC 57.782 36.000 13.65 10.42 33.67 1.89
740 761 7.821595 AACGTTTGTAATCTGATGACGATAA 57.178 32.000 0.00 2.21 33.67 1.75
741 762 7.821595 AAACGTTTGTAATCTGATGACGATA 57.178 32.000 13.81 0.00 33.67 2.92
743 764 6.018588 ACAAAACGTTTGTAATCTGATGACGA 60.019 34.615 15.46 4.82 33.67 4.20
744 765 6.133392 ACAAAACGTTTGTAATCTGATGACG 58.867 36.000 15.46 5.31 35.39 4.35
775 799 2.353145 AGGATTAGCGCGCGTACG 60.353 61.111 32.35 11.84 44.07 3.67
776 800 2.015090 GGAGGATTAGCGCGCGTAC 61.015 63.158 32.35 16.74 0.00 3.67
777 801 0.886043 TAGGAGGATTAGCGCGCGTA 60.886 55.000 32.35 18.32 0.00 4.42
798 822 2.943345 GCGTCGTGCTTCACTGGTG 61.943 63.158 0.00 0.00 41.73 4.17
800 824 2.661537 TGCGTCGTGCTTCACTGG 60.662 61.111 0.00 0.00 46.63 4.00
801 825 2.546321 GTGCGTCGTGCTTCACTG 59.454 61.111 0.00 0.00 46.63 3.66
802 826 2.661866 GGTGCGTCGTGCTTCACT 60.662 61.111 0.00 0.00 46.63 3.41
803 827 4.059459 CGGTGCGTCGTGCTTCAC 62.059 66.667 0.00 0.00 46.63 3.18
804 828 4.578898 ACGGTGCGTCGTGCTTCA 62.579 61.111 3.36 0.00 46.63 3.02
805 829 2.743871 GAAACGGTGCGTCGTGCTTC 62.744 60.000 4.95 3.29 46.63 3.86
806 830 2.877974 GAAACGGTGCGTCGTGCTT 61.878 57.895 4.95 0.00 46.63 3.91
808 832 4.364409 GGAAACGGTGCGTCGTGC 62.364 66.667 4.95 1.55 43.07 5.34
809 833 2.962786 TGGAAACGGTGCGTCGTG 60.963 61.111 4.95 0.00 43.07 4.35
810 834 2.963320 GTGGAAACGGTGCGTCGT 60.963 61.111 0.00 0.00 46.08 4.34
811 835 4.054455 CGTGGAAACGGTGCGTCG 62.054 66.667 0.00 0.00 39.99 5.12
812 836 1.764180 TTTCGTGGAAACGGTGCGTC 61.764 55.000 0.00 0.00 39.99 5.19
813 837 1.768112 CTTTCGTGGAAACGGTGCGT 61.768 55.000 0.00 0.00 43.97 5.24
814 838 1.083015 CTTTCGTGGAAACGGTGCG 60.083 57.895 0.00 0.00 0.00 5.34
815 839 1.370051 GCTTTCGTGGAAACGGTGC 60.370 57.895 0.00 0.00 0.00 5.01
816 840 1.281656 GGCTTTCGTGGAAACGGTG 59.718 57.895 0.00 0.00 0.00 4.94
817 841 1.895231 GGGCTTTCGTGGAAACGGT 60.895 57.895 0.00 0.00 0.00 4.83
818 842 2.622962 GGGGCTTTCGTGGAAACGG 61.623 63.158 0.00 0.00 0.00 4.44
819 843 2.622962 GGGGGCTTTCGTGGAAACG 61.623 63.158 0.00 0.00 0.00 3.60
820 844 2.622962 CGGGGGCTTTCGTGGAAAC 61.623 63.158 0.00 0.00 0.00 2.78
821 845 2.281900 CGGGGGCTTTCGTGGAAA 60.282 61.111 0.00 0.00 0.00 3.13
825 849 2.851071 TTTTGCGGGGGCTTTCGTG 61.851 57.895 0.00 0.00 0.00 4.35
826 850 2.519780 TTTTGCGGGGGCTTTCGT 60.520 55.556 0.00 0.00 0.00 3.85
827 851 2.049526 GTTTTGCGGGGGCTTTCG 60.050 61.111 0.00 0.00 0.00 3.46
828 852 2.049526 CGTTTTGCGGGGGCTTTC 60.050 61.111 0.00 0.00 36.85 2.62
829 853 4.293648 GCGTTTTGCGGGGGCTTT 62.294 61.111 0.00 0.00 41.69 3.51
838 862 2.038269 TGGGGATCGAGCGTTTTGC 61.038 57.895 0.00 0.00 46.98 3.68
839 863 1.644786 GGTGGGGATCGAGCGTTTTG 61.645 60.000 0.00 0.00 0.00 2.44
840 864 1.376812 GGTGGGGATCGAGCGTTTT 60.377 57.895 0.00 0.00 0.00 2.43
841 865 2.267961 GGTGGGGATCGAGCGTTT 59.732 61.111 0.00 0.00 0.00 3.60
849 873 0.463833 GTGAATGGACGGTGGGGATC 60.464 60.000 0.00 0.00 0.00 3.36
856 880 2.124507 CTGTGGGGTGAATGGACGGT 62.125 60.000 0.00 0.00 0.00 4.83
869 893 2.273449 GGAGATGTGGCCTGTGGG 59.727 66.667 3.32 0.00 0.00 4.61
875 899 2.125106 GACCGTGGAGATGTGGCC 60.125 66.667 0.00 0.00 0.00 5.36
876 900 2.125106 GGACCGTGGAGATGTGGC 60.125 66.667 0.00 0.00 0.00 5.01
879 903 2.291043 GGGTGGACCGTGGAGATGT 61.291 63.158 0.00 0.00 36.71 3.06
886 910 3.706373 CAGGGAGGGTGGACCGTG 61.706 72.222 0.00 0.00 46.96 4.94
893 917 4.133373 CATGGGCCAGGGAGGGTG 62.133 72.222 13.78 0.00 38.09 4.61
975 1000 0.035458 AGGAGGGCAAACGAACTCTG 59.965 55.000 0.00 0.00 0.00 3.35
978 1003 1.375326 GGAGGAGGGCAAACGAACT 59.625 57.895 0.00 0.00 0.00 3.01
979 1004 1.674651 GGGAGGAGGGCAAACGAAC 60.675 63.158 0.00 0.00 0.00 3.95
980 1005 2.754375 GGGAGGAGGGCAAACGAA 59.246 61.111 0.00 0.00 0.00 3.85
981 1006 3.327404 GGGGAGGAGGGCAAACGA 61.327 66.667 0.00 0.00 0.00 3.85
982 1007 4.426313 GGGGGAGGAGGGCAAACG 62.426 72.222 0.00 0.00 0.00 3.60
1160 1188 0.392863 TCATGGCTGGATTGGACGTG 60.393 55.000 0.00 0.00 0.00 4.49
1161 1189 0.548031 ATCATGGCTGGATTGGACGT 59.452 50.000 0.00 0.00 0.00 4.34
1186 1214 2.771943 TGGGATTACCTCAAAGCTCGAT 59.228 45.455 0.00 0.00 41.11 3.59
1187 1215 2.184533 TGGGATTACCTCAAAGCTCGA 58.815 47.619 0.00 0.00 41.11 4.04
1277 1305 5.889289 GCCCAATGACTAAAATGTAACCCTA 59.111 40.000 0.00 0.00 0.00 3.53
1311 1340 1.669115 CGCGGGATTCAGGGCATAG 60.669 63.158 0.00 0.00 0.00 2.23
1381 1410 4.023536 CACTAGTTGTACAACGCCCAAAAT 60.024 41.667 28.21 13.96 45.50 1.82
1397 1441 1.806542 CGCATCAAGGCAACACTAGTT 59.193 47.619 0.00 0.00 38.88 2.24
1453 1497 6.036191 GCACAAGTAGATACAAAGAGGTAAGC 59.964 42.308 0.00 0.00 0.00 3.09
1599 1643 5.648247 TCAAGGTAGTGGTAGACCTAAAGT 58.352 41.667 0.00 0.00 45.64 2.66
1603 1647 5.834460 TCAATCAAGGTAGTGGTAGACCTA 58.166 41.667 0.00 0.00 45.64 3.08
1605 1649 5.416271 TTCAATCAAGGTAGTGGTAGACC 57.584 43.478 0.00 0.00 35.83 3.85
1607 1651 8.768397 ACATAATTCAATCAAGGTAGTGGTAGA 58.232 33.333 0.00 0.00 0.00 2.59
1640 1775 5.990120 AGCTTAGACATTTTGCCTTCAAT 57.010 34.783 0.00 0.00 31.33 2.57
1641 1776 7.039784 ACAATAGCTTAGACATTTTGCCTTCAA 60.040 33.333 0.00 0.00 0.00 2.69
1642 1777 6.434028 ACAATAGCTTAGACATTTTGCCTTCA 59.566 34.615 0.00 0.00 0.00 3.02
1643 1778 6.749118 CACAATAGCTTAGACATTTTGCCTTC 59.251 38.462 0.00 0.00 0.00 3.46
1712 1848 3.869065 GCAGTAAACACTATGCCTACCA 58.131 45.455 0.00 0.00 32.49 3.25
1731 1867 3.342719 TGACATTAGCTTCAAATCGGCA 58.657 40.909 0.00 0.00 0.00 5.69
1733 1869 3.242870 GCCTGACATTAGCTTCAAATCGG 60.243 47.826 0.00 0.00 0.00 4.18
1734 1870 3.374988 TGCCTGACATTAGCTTCAAATCG 59.625 43.478 0.00 0.00 0.00 3.34
1738 1874 6.183360 CCAAATATGCCTGACATTAGCTTCAA 60.183 38.462 0.00 0.00 40.38 2.69
1796 1932 3.808728 ACACTACGCAAGCATATGGAAT 58.191 40.909 4.56 0.00 45.62 3.01
1837 1973 7.737972 TCAAACAAAGCACTACAGCTAATTA 57.262 32.000 0.00 0.00 45.89 1.40
1974 2111 3.118775 AGTCATATGCCGCAAACTGAGTA 60.119 43.478 0.00 0.00 0.00 2.59
2278 2416 4.359706 TGCTCATACTATACAGCACAACG 58.640 43.478 0.00 0.00 36.96 4.10
2478 2661 1.317613 CTGTAAACCACCTGCTTGCA 58.682 50.000 0.00 0.00 0.00 4.08
2479 2662 0.598065 CCTGTAAACCACCTGCTTGC 59.402 55.000 0.00 0.00 0.00 4.01
2635 2818 8.512138 ACATACACTGCCTTCATAAGTTTTAAC 58.488 33.333 0.00 0.00 0.00 2.01
2732 2915 5.491070 TGAGAAGGTCATTCCATTACACAG 58.509 41.667 0.00 0.00 38.84 3.66
2747 2930 6.405286 CGTTGAGTGATAGAAGATGAGAAGGT 60.405 42.308 0.00 0.00 0.00 3.50
2838 3022 1.070914 GAATTTTGGTTTTCCCCGCCA 59.929 47.619 0.00 0.00 39.73 5.69
2911 3096 5.376854 ACAACAAAATAGGCTAGCACTTG 57.623 39.130 18.24 13.26 0.00 3.16
2997 3182 8.956533 ATGCTAAACACAATGGTTAAAAACTT 57.043 26.923 0.00 0.00 27.82 2.66
2998 3183 8.956533 AATGCTAAACACAATGGTTAAAAACT 57.043 26.923 0.00 0.00 27.82 2.66
2999 3184 9.995957 AAAATGCTAAACACAATGGTTAAAAAC 57.004 25.926 0.00 0.00 27.82 2.43
3001 3186 8.831550 GGAAAATGCTAAACACAATGGTTAAAA 58.168 29.630 0.00 0.00 27.82 1.52
3002 3187 8.207545 AGGAAAATGCTAAACACAATGGTTAAA 58.792 29.630 0.00 0.00 27.82 1.52
3003 3188 7.655328 CAGGAAAATGCTAAACACAATGGTTAA 59.345 33.333 0.00 0.00 27.82 2.01
3188 3373 8.684386 TCTTTGACATAAAACATTAGGACACA 57.316 30.769 0.00 0.00 0.00 3.72
3211 3396 7.599998 GCACAAGATTTACCAATGAAATGTTCT 59.400 33.333 0.00 0.00 29.91 3.01
3212 3397 7.148590 GGCACAAGATTTACCAATGAAATGTTC 60.149 37.037 0.00 0.00 29.91 3.18
3277 3463 1.269988 CCCGAGTACCAGATGAGCATG 60.270 57.143 0.00 0.00 0.00 4.06
3290 3476 0.685131 TTCTCCATTCGCCCCGAGTA 60.685 55.000 0.00 0.00 37.14 2.59
3295 3481 1.098129 GCTTCTTCTCCATTCGCCCC 61.098 60.000 0.00 0.00 0.00 5.80
3343 3529 0.682209 ATACCGTACGCTGTCCAGGT 60.682 55.000 10.49 2.10 35.91 4.00
3366 3552 9.853555 CATAAAACAGCAAAATATCCAAGTACA 57.146 29.630 0.00 0.00 0.00 2.90
3434 3629 6.150976 CCCTGTTACAGTTGATCATGCTTAAA 59.849 38.462 11.68 0.00 0.00 1.52
3435 3630 5.647658 CCCTGTTACAGTTGATCATGCTTAA 59.352 40.000 11.68 0.00 0.00 1.85
3436 3631 5.045942 TCCCTGTTACAGTTGATCATGCTTA 60.046 40.000 11.68 0.00 0.00 3.09
3437 3632 4.012374 CCCTGTTACAGTTGATCATGCTT 58.988 43.478 11.68 0.00 0.00 3.91
3438 3633 3.264193 TCCCTGTTACAGTTGATCATGCT 59.736 43.478 11.68 0.00 0.00 3.79
3439 3634 3.609853 TCCCTGTTACAGTTGATCATGC 58.390 45.455 11.68 0.00 0.00 4.06
3440 3635 7.011763 CACTAATCCCTGTTACAGTTGATCATG 59.988 40.741 11.68 8.13 0.00 3.07
3441 3636 7.050377 CACTAATCCCTGTTACAGTTGATCAT 58.950 38.462 11.68 2.50 0.00 2.45
3442 3637 6.013725 ACACTAATCCCTGTTACAGTTGATCA 60.014 38.462 11.68 0.00 0.00 2.92
3456 3651 4.716784 TCATGAGCACTAACACTAATCCCT 59.283 41.667 0.00 0.00 0.00 4.20
3457 3652 5.023533 TCATGAGCACTAACACTAATCCC 57.976 43.478 0.00 0.00 0.00 3.85
3464 3659 2.800544 ACGTGTTCATGAGCACTAACAC 59.199 45.455 31.59 22.79 45.15 3.32
3516 3711 1.917336 TATTTGGCCCTGACCCGGTC 61.917 60.000 10.96 10.96 0.00 4.79
3521 3716 4.164843 TGTCTTATATTTGGCCCTGACC 57.835 45.455 0.00 0.00 0.00 4.02
3526 3721 5.244626 AGCATCATTGTCTTATATTTGGCCC 59.755 40.000 0.00 0.00 0.00 5.80
3564 3759 1.102978 CCAACCCTTTAGGCGAATGG 58.897 55.000 5.45 5.45 40.58 3.16
3569 3764 2.686405 GTTTATCCCAACCCTTTAGGCG 59.314 50.000 0.00 0.00 40.58 5.52
3619 3814 9.003658 TGACTGTTCTCTTCATTTTCCTATTTC 57.996 33.333 0.00 0.00 0.00 2.17
3632 3827 6.851222 TGATTGACTTTGACTGTTCTCTTC 57.149 37.500 0.00 0.00 0.00 2.87
3758 3953 2.445682 TTTGTGGTTTGGCAGTAGGT 57.554 45.000 0.00 0.00 0.00 3.08
3778 3973 8.292448 CAGCAGAAAGTTTCACACTATTGTAAT 58.708 33.333 17.65 0.00 32.94 1.89
3792 3987 3.744660 ACCGAAGATCAGCAGAAAGTTT 58.255 40.909 0.00 0.00 0.00 2.66
3829 4024 1.207791 CTGGAGACCTGGTGGCTAAT 58.792 55.000 2.82 0.00 36.63 1.73
3852 4047 3.552604 TTAGCACGACTGCAATTTTCC 57.447 42.857 0.52 0.00 46.97 3.13
3897 4092 5.872070 CACTAGGGAAGTCTTGTTCAGAATC 59.128 44.000 0.00 0.00 35.76 2.52
3971 4166 6.592607 ACCTAAACATGGTAACTGTTCATACG 59.407 38.462 0.00 0.00 35.84 3.06
3996 4191 0.179094 AACGAGAACGGTGCAGACAA 60.179 50.000 0.00 0.00 44.46 3.18
3997 4192 1.440060 AACGAGAACGGTGCAGACA 59.560 52.632 0.00 0.00 44.46 3.41
4013 4208 5.682943 TTGGCTGTAGTACAATCAACAAC 57.317 39.130 4.21 0.00 0.00 3.32
4059 4254 6.480763 ACATGGGGATTTAATTTTTGTTCCC 58.519 36.000 0.00 0.00 41.77 3.97
4068 4284 8.336235 TCTGTCTTAGAACATGGGGATTTAATT 58.664 33.333 0.00 0.00 30.84 1.40
4176 4393 3.008813 AGGAGTTGACAAGTGAGCATGAT 59.991 43.478 0.00 0.00 0.00 2.45
4179 4396 2.636893 AGAGGAGTTGACAAGTGAGCAT 59.363 45.455 0.00 0.00 0.00 3.79
4219 4436 0.535780 TGAACAGAGCTGGCAAGTGG 60.536 55.000 0.00 0.00 34.19 4.00
5010 5335 9.562583 GAATAGCTAACTCTGAGGTTATTATCG 57.437 37.037 9.85 0.00 32.25 2.92
5064 5392 4.976224 TGCATCAAAATCATCACCTGAG 57.024 40.909 0.00 0.00 37.28 3.35
5232 5560 4.510167 ATGCTTACTCCCACAAGCTATT 57.490 40.909 7.71 0.00 45.89 1.73
5316 5644 1.294041 TGGTATCAACTCCATGCCCA 58.706 50.000 0.00 0.00 0.00 5.36
5388 5716 0.246086 GAAATTCCCCGCATGCAACA 59.754 50.000 19.57 0.00 0.00 3.33
5574 5902 1.792949 GTTGAAGTCACTACGGCTGTG 59.207 52.381 8.92 0.70 36.82 3.66
5699 6027 2.337583 CACAAGCTGCACGTACAGTAT 58.662 47.619 16.91 3.93 39.96 2.12
5708 6036 1.299620 CAAGCACCACAAGCTGCAC 60.300 57.895 1.02 0.00 42.53 4.57
5919 6247 1.527433 GCCCAGAAGTTGACAAGGCC 61.527 60.000 0.00 0.00 32.68 5.19
6002 6330 1.854280 TCCCTTTAACAACAGTGGGGT 59.146 47.619 0.00 0.00 35.56 4.95
6029 6357 3.541996 TCTCTTCAACACAACTGCTGA 57.458 42.857 0.00 0.00 0.00 4.26
6063 6391 1.400846 GTCAGCAGAGCAACATGATGG 59.599 52.381 0.00 0.00 33.72 3.51
6607 6935 1.679680 CCGGCTGTTATTCCTCGAGTA 59.320 52.381 12.31 0.00 0.00 2.59
6612 6940 2.014857 GGAAACCGGCTGTTATTCCTC 58.985 52.381 0.00 0.00 35.67 3.71
6666 6994 2.954318 CAACTCCTTGGAATGGCCTATG 59.046 50.000 3.32 0.00 37.63 2.23
6688 7016 3.084786 AGGTAGGAATGCACAAAGAAGC 58.915 45.455 0.00 0.00 0.00 3.86
6730 7058 4.685447 TGGTGAAATCGGACCACG 57.315 55.556 0.00 0.00 46.11 4.94
6804 7132 8.447833 TCAGTCATATTTTTGTTTGACGGATAC 58.552 33.333 0.00 0.00 42.51 2.24
6842 7170 7.282901 TGATGATGGTTACCTGTGATTGTAATG 59.717 37.037 2.07 0.00 30.35 1.90
6843 7171 7.345691 TGATGATGGTTACCTGTGATTGTAAT 58.654 34.615 2.07 0.00 30.35 1.89
6846 7174 5.178096 TGATGATGGTTACCTGTGATTGT 57.822 39.130 2.07 0.00 0.00 2.71
6931 7259 6.231211 AGAACTGTCATCCTACGAAAACATT 58.769 36.000 0.00 0.00 0.00 2.71
7066 7402 5.049405 GGTTAGGTCACTGTGTGAGAAATTG 60.049 44.000 7.79 0.00 43.57 2.32
7122 7458 7.441836 TCTGCTTCAAGTAATTCAGACTTACA 58.558 34.615 12.01 0.00 35.36 2.41
7435 7771 6.040504 GTCTCCCCAGTTTTTGTTTTCAGTAT 59.959 38.462 0.00 0.00 0.00 2.12
7547 7883 1.728971 GTGCTTCCACTTCTCATCACG 59.271 52.381 0.00 0.00 38.93 4.35
7615 7958 5.046735 AGGTTATCAGCATCGATTCATAGCT 60.047 40.000 0.00 0.00 35.63 3.32
7689 8041 2.309755 AGGGTGGCATCTCTTTCATTCA 59.690 45.455 0.00 0.00 0.00 2.57
7887 8239 7.488471 TCTCTTATTTCGCTTTAGTCAGTTAGC 59.512 37.037 0.00 0.00 0.00 3.09
7889 8241 9.701098 TTTCTCTTATTTCGCTTTAGTCAGTTA 57.299 29.630 0.00 0.00 0.00 2.24
7897 8249 7.197071 TGCTGTTTTCTCTTATTTCGCTTTA 57.803 32.000 0.00 0.00 0.00 1.85
7900 8252 5.689383 TTGCTGTTTTCTCTTATTTCGCT 57.311 34.783 0.00 0.00 0.00 4.93
7927 8279 1.367346 TGTTCCTGGATGCCTTGGTA 58.633 50.000 0.00 0.00 0.00 3.25
7946 8316 3.509575 TCTGTGAAACCTTGTTGCTGTTT 59.490 39.130 0.00 0.00 34.36 2.83
7964 8334 1.534235 AGTGGCGGAACTCCTCTGT 60.534 57.895 0.00 0.00 35.58 3.41
7994 8364 1.628846 AGGGTTGGCGACTATGAGTTT 59.371 47.619 4.59 0.00 0.00 2.66
8000 8370 0.676782 GCAACAGGGTTGGCGACTAT 60.677 55.000 10.73 0.00 0.00 2.12
8002 8372 2.594592 GCAACAGGGTTGGCGACT 60.595 61.111 10.73 0.00 0.00 4.18
8109 8480 1.001706 TCGTTGACAGGACACTCTTCG 60.002 52.381 0.00 0.00 0.00 3.79
8181 8552 5.298026 TGACCTTGAAACATCGTTCAAATGA 59.702 36.000 2.36 0.00 44.66 2.57
8203 8574 2.268920 GGCGCTGGAATCAGGTGA 59.731 61.111 7.64 0.00 41.19 4.02
8249 8620 2.426522 TGTCTGCTACAATGCTGTTCC 58.573 47.619 0.00 0.00 36.96 3.62
8269 8640 3.074390 TCAACCTGTTCAGTCCATTCCAT 59.926 43.478 0.00 0.00 0.00 3.41
8294 8665 5.107989 CGAAATAGCGTGATGTATACACCAC 60.108 44.000 19.03 19.03 35.17 4.16
8358 8729 7.306013 AGAACAGGATAAGATGTCCATACCTA 58.694 38.462 0.00 0.00 38.25 3.08
8401 8774 0.249398 ATCCACGACGGGAAAAGGAG 59.751 55.000 0.00 0.00 41.12 3.69
8402 8775 0.688487 AATCCACGACGGGAAAAGGA 59.312 50.000 0.00 0.00 41.12 3.36
8411 8785 5.558273 GCAATCAATAGGTAAATCCACGACG 60.558 44.000 0.00 0.00 39.02 5.12
8412 8786 5.527582 AGCAATCAATAGGTAAATCCACGAC 59.472 40.000 0.00 0.00 39.02 4.34
8423 8797 5.477984 TGAGCAAAAGAAGCAATCAATAGGT 59.522 36.000 0.00 0.00 0.00 3.08
8433 8807 0.179032 TCGGGTGAGCAAAAGAAGCA 60.179 50.000 0.00 0.00 0.00 3.91
8642 9016 6.174720 TGAACAGAGACCAGACAAGTAAAT 57.825 37.500 0.00 0.00 0.00 1.40
8679 9054 1.915489 ACAGAATCCACCAGGCATGTA 59.085 47.619 0.00 0.00 33.74 2.29
8802 9179 1.135344 GTCGTACAGAGAGAAGCCACC 60.135 57.143 0.00 0.00 0.00 4.61
8853 9230 3.211045 TGAGTGCCACTAAACCAAAGAC 58.789 45.455 0.00 0.00 0.00 3.01
8894 9275 7.679783 TCCATTCGAGTATTTCACATGGATAT 58.320 34.615 5.73 0.00 31.50 1.63
8921 9302 2.092429 ACTTTCAAGTCCAGCAAGTCCA 60.092 45.455 0.00 0.00 32.86 4.02
8977 9358 3.254166 AGCAGAGCAGTAAAACACCATTG 59.746 43.478 0.00 0.00 0.00 2.82
8981 9362 3.990318 AAAGCAGAGCAGTAAAACACC 57.010 42.857 0.00 0.00 0.00 4.16
8982 9363 3.968724 CGAAAAGCAGAGCAGTAAAACAC 59.031 43.478 0.00 0.00 0.00 3.32
8983 9364 3.003275 CCGAAAAGCAGAGCAGTAAAACA 59.997 43.478 0.00 0.00 0.00 2.83
8986 9630 1.535462 GCCGAAAAGCAGAGCAGTAAA 59.465 47.619 0.00 0.00 0.00 2.01
8999 9643 2.156098 ACTAAGCATTTCGGCCGAAAA 58.844 42.857 45.97 32.02 45.60 2.29
9003 9647 2.095466 TGAAAACTAAGCATTTCGGCCG 60.095 45.455 22.12 22.12 38.16 6.13
9005 9649 3.057526 ACCTGAAAACTAAGCATTTCGGC 60.058 43.478 0.00 0.00 39.50 5.54
9023 9668 4.321718 TCTTGAATTGCTCAGAGAACCTG 58.678 43.478 0.00 0.00 44.27 4.00
9024 9669 4.630644 TCTTGAATTGCTCAGAGAACCT 57.369 40.909 0.00 0.00 34.81 3.50
9025 9670 5.638783 CAATCTTGAATTGCTCAGAGAACC 58.361 41.667 0.00 0.00 34.81 3.62
9036 9681 5.319140 TGATGACAGGCAATCTTGAATTG 57.681 39.130 0.00 0.00 0.00 2.32
9037 9682 5.578005 CTGATGACAGGCAATCTTGAATT 57.422 39.130 0.00 0.00 40.14 2.17
9078 9723 5.512788 CCTAAACAAATCATGACACGCAATC 59.487 40.000 0.00 0.00 0.00 2.67
9099 9744 3.459598 AGCCTAAATCTCACCATTGCCTA 59.540 43.478 0.00 0.00 0.00 3.93
9103 9748 4.521146 ACTCAGCCTAAATCTCACCATTG 58.479 43.478 0.00 0.00 0.00 2.82
9118 9763 2.398498 CAGTCACGCATATACTCAGCC 58.602 52.381 0.00 0.00 0.00 4.85
9121 9766 3.066760 CAGTCCAGTCACGCATATACTCA 59.933 47.826 0.00 0.00 0.00 3.41
9125 9770 4.465632 AAACAGTCCAGTCACGCATATA 57.534 40.909 0.00 0.00 0.00 0.86
9126 9771 3.334583 AAACAGTCCAGTCACGCATAT 57.665 42.857 0.00 0.00 0.00 1.78
9138 9783 4.024809 GCTCACTAGTCACAAAAACAGTCC 60.025 45.833 0.00 0.00 0.00 3.85
9139 9784 4.811557 AGCTCACTAGTCACAAAAACAGTC 59.188 41.667 0.00 0.00 0.00 3.51
9165 9812 7.540055 ACAAACGACTACCGAGTTTATCTTTAG 59.460 37.037 0.00 0.00 41.76 1.85
9172 9819 4.836125 AGACAAACGACTACCGAGTTTA 57.164 40.909 0.00 0.00 41.76 2.01
9185 9832 4.981794 ACAAGAGGAACAAAAGACAAACG 58.018 39.130 0.00 0.00 0.00 3.60
9206 9853 2.173382 GACCGTGCATGTGCGAAC 59.827 61.111 4.96 0.00 45.83 3.95
9236 9883 5.680619 TGAGTTATTTGTGCCCTAGGTATG 58.319 41.667 8.29 0.00 0.00 2.39
9237 9884 5.968676 TGAGTTATTTGTGCCCTAGGTAT 57.031 39.130 8.29 0.00 0.00 2.73
9250 9897 5.047660 TGGCGCCAAAGTTATTGAGTTATTT 60.048 36.000 30.74 0.00 0.00 1.40
9251 9898 4.461081 TGGCGCCAAAGTTATTGAGTTATT 59.539 37.500 30.74 0.00 0.00 1.40
9279 9926 0.737715 GCTGAGTTGGTAGCCACTCG 60.738 60.000 18.14 14.30 35.77 4.18
9343 9990 8.915654 GCACATGTTAGACTTTTAAAAAGGATG 58.084 33.333 0.00 1.89 0.00 3.51
9344 9991 8.637986 TGCACATGTTAGACTTTTAAAAAGGAT 58.362 29.630 0.00 0.00 0.00 3.24
9345 9992 8.001881 TGCACATGTTAGACTTTTAAAAAGGA 57.998 30.769 0.00 0.00 0.00 3.36
9346 9993 8.641499 TTGCACATGTTAGACTTTTAAAAAGG 57.359 30.769 0.00 2.32 0.00 3.11
9347 9994 9.301153 ACTTGCACATGTTAGACTTTTAAAAAG 57.699 29.630 0.00 0.00 0.00 2.27
9493 10199 6.346096 CCTTCTTCCGTTCCACAATATAAGA 58.654 40.000 0.00 0.00 0.00 2.10
9508 10214 6.037610 GCATTGCTATATATTCCCTTCTTCCG 59.962 42.308 0.16 0.00 0.00 4.30
9509 10215 6.319911 GGCATTGCTATATATTCCCTTCTTCC 59.680 42.308 8.82 0.00 0.00 3.46
9510 10216 6.886459 TGGCATTGCTATATATTCCCTTCTTC 59.114 38.462 8.82 0.00 0.00 2.87
9511 10217 6.793478 TGGCATTGCTATATATTCCCTTCTT 58.207 36.000 8.82 0.00 0.00 2.52
9512 10218 6.392911 TGGCATTGCTATATATTCCCTTCT 57.607 37.500 8.82 0.00 0.00 2.85
9513 10219 7.417116 CCAATGGCATTGCTATATATTCCCTTC 60.417 40.741 30.21 0.00 38.92 3.46
9514 10220 6.381994 CCAATGGCATTGCTATATATTCCCTT 59.618 38.462 30.21 0.00 38.92 3.95
9520 10226 6.812998 GCATTCCAATGGCATTGCTATATAT 58.187 36.000 30.21 14.90 38.92 0.86
9525 10231 2.894763 GCATTCCAATGGCATTGCTA 57.105 45.000 30.21 20.91 38.92 3.49
9562 10268 8.371571 AGGATGAGATGCAGATACATATACAA 57.628 34.615 0.00 0.00 0.00 2.41
9593 10299 2.413837 GCGTCACTTCAAAGGCTAGAA 58.586 47.619 0.00 0.00 0.00 2.10
9639 10374 0.172578 GGATAAAAACCCGGCAGCAC 59.827 55.000 0.00 0.00 0.00 4.40
9691 10426 1.689233 ATACGGCTGGGAAGGAGCA 60.689 57.895 0.00 0.00 38.27 4.26
9700 10435 2.009774 CCAAACTCTTCATACGGCTGG 58.990 52.381 0.00 0.00 0.00 4.85
9701 10436 2.699954 ACCAAACTCTTCATACGGCTG 58.300 47.619 0.00 0.00 0.00 4.85
9723 10458 3.964031 TGCTCCCCTTTTGCTTTTAGAAA 59.036 39.130 0.00 0.00 0.00 2.52
9725 10460 2.890945 GTGCTCCCCTTTTGCTTTTAGA 59.109 45.455 0.00 0.00 0.00 2.10
9727 10462 1.967779 GGTGCTCCCCTTTTGCTTTTA 59.032 47.619 0.00 0.00 0.00 1.52
9728 10463 0.758734 GGTGCTCCCCTTTTGCTTTT 59.241 50.000 0.00 0.00 0.00 2.27
9729 10464 1.463553 CGGTGCTCCCCTTTTGCTTT 61.464 55.000 0.00 0.00 0.00 3.51
9732 10467 2.597510 ACGGTGCTCCCCTTTTGC 60.598 61.111 0.00 0.00 0.00 3.68
9733 10468 2.268076 CCACGGTGCTCCCCTTTTG 61.268 63.158 1.68 0.00 0.00 2.44
9734 10469 2.115266 CCACGGTGCTCCCCTTTT 59.885 61.111 1.68 0.00 0.00 2.27
9776 10754 3.828451 TCGGTTTTGTGTAGTAGCCTAGT 59.172 43.478 0.00 0.00 0.00 2.57
9777 10755 4.082354 AGTCGGTTTTGTGTAGTAGCCTAG 60.082 45.833 0.00 0.00 0.00 3.02
9780 10758 2.735134 CAGTCGGTTTTGTGTAGTAGCC 59.265 50.000 0.00 0.00 0.00 3.93
9783 10761 4.281435 TGGATCAGTCGGTTTTGTGTAGTA 59.719 41.667 0.00 0.00 0.00 1.82
9787 10765 2.631160 TGGATCAGTCGGTTTTGTGT 57.369 45.000 0.00 0.00 0.00 3.72
9795 10773 0.942252 TCGTACGATGGATCAGTCGG 59.058 55.000 15.28 5.91 41.87 4.79
9800 10778 1.135527 GTGGGTTCGTACGATGGATCA 59.864 52.381 20.27 10.48 0.00 2.92
9829 10807 2.417936 GGTAGAGCTGCGTAGGCC 59.582 66.667 4.72 0.00 38.85 5.19
9836 10814 1.757118 TCAGTATGGTGGTAGAGCTGC 59.243 52.381 0.00 0.00 36.16 5.25
9845 10823 2.996249 AGCAGTGATCAGTATGGTGG 57.004 50.000 1.86 0.00 36.16 4.61
9847 10825 4.680708 CGGTTTAGCAGTGATCAGTATGGT 60.681 45.833 1.86 7.50 36.16 3.55
9852 10830 3.510360 ACTACGGTTTAGCAGTGATCAGT 59.490 43.478 0.00 0.00 0.00 3.41
9854 10832 4.703575 ACTACTACGGTTTAGCAGTGATCA 59.296 41.667 0.00 0.00 0.00 2.92
9857 10835 4.093408 CGTACTACTACGGTTTAGCAGTGA 59.907 45.833 0.00 0.00 41.84 3.41
9882 10864 1.942657 CTTTCATTCGCCGGTGATCAT 59.057 47.619 20.33 7.53 0.00 2.45
9896 10878 3.134127 GCTTCGGCGGCCTTTCAT 61.134 61.111 18.34 0.00 0.00 2.57
9937 10919 0.036388 CCCTGTCTTTTAGCCGAGCA 60.036 55.000 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.