Multiple sequence alignment - TraesCS7B01G089200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G089200 chr7B 100.000 3621 0 0 1 3621 104007418 104003798 0.000000e+00 6687.0
1 TraesCS7B01G089200 chr7B 93.725 494 24 5 7 499 649256456 649255969 0.000000e+00 734.0
2 TraesCS7B01G089200 chr7B 79.147 633 109 18 2001 2620 106128611 106129233 2.010000e-112 416.0
3 TraesCS7B01G089200 chr7B 89.247 279 25 4 1 275 292806967 292806690 9.630000e-91 344.0
4 TraesCS7B01G089200 chr7D 96.322 1604 55 2 1509 3112 138509316 138507717 0.000000e+00 2632.0
5 TraesCS7B01G089200 chr7D 91.732 508 32 7 3116 3621 138506690 138506191 0.000000e+00 697.0
6 TraesCS7B01G089200 chr7D 83.908 522 35 17 657 1162 138509988 138509500 1.530000e-123 453.0
7 TraesCS7B01G089200 chr7D 80.203 591 94 18 2005 2582 140846406 140846986 4.320000e-114 422.0
8 TraesCS7B01G089200 chr7D 93.443 61 4 0 597 657 138510096 138510036 1.380000e-14 91.6
9 TraesCS7B01G089200 chr7A 95.716 957 38 3 1679 2634 138742377 138741423 0.000000e+00 1537.0
10 TraesCS7B01G089200 chr7A 86.962 859 63 18 657 1499 138752598 138751773 0.000000e+00 920.0
11 TraesCS7B01G089200 chr7A 93.617 517 23 8 3109 3621 138735756 138735246 0.000000e+00 763.0
12 TraesCS7B01G089200 chr7A 92.717 357 26 0 2629 2985 138736410 138736054 1.930000e-142 516.0
13 TraesCS7B01G089200 chr7A 79.270 685 121 16 1948 2620 143079809 143080484 3.290000e-125 459.0
14 TraesCS7B01G089200 chr7A 93.182 220 13 2 278 497 23159126 23159343 4.510000e-84 322.0
15 TraesCS7B01G089200 chr7A 93.897 213 11 2 1 212 660529757 660529546 1.620000e-83 320.0
16 TraesCS7B01G089200 chr7A 92.308 78 4 1 3034 3111 138736053 138735978 3.820000e-20 110.0
17 TraesCS7B01G089200 chr6B 94.223 502 22 6 2 499 1618348 1618846 0.000000e+00 760.0
18 TraesCS7B01G089200 chr2B 94.320 493 21 5 1 492 63266296 63266782 0.000000e+00 749.0
19 TraesCS7B01G089200 chr3B 93.439 503 16 6 1 499 395842992 395842503 0.000000e+00 730.0
20 TraesCS7B01G089200 chr6A 92.958 497 23 6 1 497 600535573 600536057 0.000000e+00 713.0
21 TraesCS7B01G089200 chrUn 91.498 494 31 6 4 497 349743113 349742631 0.000000e+00 669.0
22 TraesCS7B01G089200 chr1A 92.220 437 22 7 1 436 581421224 581421649 3.090000e-170 608.0
23 TraesCS7B01G089200 chr5B 94.606 241 10 3 259 499 577855946 577855709 1.590000e-98 370.0
24 TraesCS7B01G089200 chr5B 94.191 241 9 4 259 497 568183298 568183535 2.660000e-96 363.0
25 TraesCS7B01G089200 chr1B 94.907 216 9 2 283 497 7646285 7646499 1.610000e-88 337.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G089200 chr7B 104003798 104007418 3620 True 6687.0 6687 100.000000 1 3621 1 chr7B.!!$R1 3620
1 TraesCS7B01G089200 chr7B 106128611 106129233 622 False 416.0 416 79.147000 2001 2620 1 chr7B.!!$F1 619
2 TraesCS7B01G089200 chr7D 138506191 138510096 3905 True 968.4 2632 91.351250 597 3621 4 chr7D.!!$R1 3024
3 TraesCS7B01G089200 chr7D 140846406 140846986 580 False 422.0 422 80.203000 2005 2582 1 chr7D.!!$F1 577
4 TraesCS7B01G089200 chr7A 138741423 138742377 954 True 1537.0 1537 95.716000 1679 2634 1 chr7A.!!$R1 955
5 TraesCS7B01G089200 chr7A 138751773 138752598 825 True 920.0 920 86.962000 657 1499 1 chr7A.!!$R2 842
6 TraesCS7B01G089200 chr7A 138735246 138736410 1164 True 463.0 763 92.880667 2629 3621 3 chr7A.!!$R4 992
7 TraesCS7B01G089200 chr7A 143079809 143080484 675 False 459.0 459 79.270000 1948 2620 1 chr7A.!!$F2 672

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
48 49 0.028902 GCTTGTTTTTCTGGTCGCGT 59.971 50.0 5.77 0.00 0.00 6.01 F
257 258 0.036732 AGAAAGAAGGATGTGCGCCA 59.963 50.0 4.18 2.31 0.00 5.69 F
397 398 0.327259 GGTAGTGGGTTTGAGTCCCC 59.673 60.0 0.00 0.00 44.00 4.81 F
2132 2383 0.112412 TTCCCTGAAAGTCAAGGGCC 59.888 55.0 0.00 0.00 35.87 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1274 1358 0.955919 CGTTTCCTTGTCCTCCAGCC 60.956 60.000 0.00 0.00 0.00 4.85 R
1700 1947 0.998669 TATCACGTGCAGCAACGATG 59.001 50.000 19.83 14.59 46.49 3.84 R
2181 2432 2.747446 CCAGTTAGGCAATACGCACTTT 59.253 45.455 0.00 0.00 45.17 2.66 R
3018 3272 0.462047 CCCCTTTAGCTACAGGCACG 60.462 60.000 18.98 7.00 44.79 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 8.607441 AAAAGAAAGAAAGAAAAACAGCTTGT 57.393 26.923 0.00 0.00 0.00 3.16
35 36 8.607441 AAAGAAAGAAAGAAAAACAGCTTGTT 57.393 26.923 0.00 0.00 43.41 2.83
45 46 3.420839 AACAGCTTGTTTTTCTGGTCG 57.579 42.857 0.00 0.00 37.26 4.79
46 47 1.065551 ACAGCTTGTTTTTCTGGTCGC 59.934 47.619 0.00 0.00 32.42 5.19
47 48 0.307760 AGCTTGTTTTTCTGGTCGCG 59.692 50.000 0.00 0.00 0.00 5.87
48 49 0.028902 GCTTGTTTTTCTGGTCGCGT 59.971 50.000 5.77 0.00 0.00 6.01
49 50 1.262151 GCTTGTTTTTCTGGTCGCGTA 59.738 47.619 5.77 0.00 0.00 4.42
50 51 2.095919 GCTTGTTTTTCTGGTCGCGTAT 60.096 45.455 5.77 0.00 0.00 3.06
51 52 3.479006 CTTGTTTTTCTGGTCGCGTATG 58.521 45.455 5.77 0.00 0.00 2.39
52 53 2.485903 TGTTTTTCTGGTCGCGTATGT 58.514 42.857 5.77 0.00 0.00 2.29
53 54 3.651206 TGTTTTTCTGGTCGCGTATGTA 58.349 40.909 5.77 0.00 0.00 2.29
54 55 3.676172 TGTTTTTCTGGTCGCGTATGTAG 59.324 43.478 5.77 0.00 0.00 2.74
55 56 3.853831 TTTTCTGGTCGCGTATGTAGA 57.146 42.857 5.77 1.57 0.00 2.59
56 57 3.853831 TTTCTGGTCGCGTATGTAGAA 57.146 42.857 5.77 7.86 0.00 2.10
57 58 3.416119 TTCTGGTCGCGTATGTAGAAG 57.584 47.619 5.77 0.00 0.00 2.85
58 59 2.362736 TCTGGTCGCGTATGTAGAAGT 58.637 47.619 5.77 0.00 0.00 3.01
59 60 3.534554 TCTGGTCGCGTATGTAGAAGTA 58.465 45.455 5.77 0.00 0.00 2.24
60 61 3.310774 TCTGGTCGCGTATGTAGAAGTAC 59.689 47.826 5.77 0.00 0.00 2.73
61 62 3.009026 TGGTCGCGTATGTAGAAGTACA 58.991 45.455 5.77 0.00 43.43 2.90
62 63 3.439825 TGGTCGCGTATGTAGAAGTACAA 59.560 43.478 5.77 0.00 42.54 2.41
63 64 4.082841 TGGTCGCGTATGTAGAAGTACAAA 60.083 41.667 5.77 0.00 42.54 2.83
64 65 5.039333 GGTCGCGTATGTAGAAGTACAAAT 58.961 41.667 5.77 0.00 42.54 2.32
65 66 6.183360 TGGTCGCGTATGTAGAAGTACAAATA 60.183 38.462 5.77 0.00 42.54 1.40
66 67 6.860023 GGTCGCGTATGTAGAAGTACAAATAT 59.140 38.462 5.77 0.00 42.54 1.28
67 68 7.380602 GGTCGCGTATGTAGAAGTACAAATATT 59.619 37.037 5.77 0.00 42.54 1.28
68 69 8.749499 GTCGCGTATGTAGAAGTACAAATATTT 58.251 33.333 5.77 0.00 42.54 1.40
69 70 9.949174 TCGCGTATGTAGAAGTACAAATATTTA 57.051 29.630 5.77 0.00 42.54 1.40
106 107 4.150897 AGCACAACTTGAAACTAGACCA 57.849 40.909 0.00 0.00 0.00 4.02
107 108 4.130118 AGCACAACTTGAAACTAGACCAG 58.870 43.478 0.00 0.00 0.00 4.00
108 109 4.127171 GCACAACTTGAAACTAGACCAGA 58.873 43.478 0.00 0.00 0.00 3.86
109 110 4.757149 GCACAACTTGAAACTAGACCAGAT 59.243 41.667 0.00 0.00 0.00 2.90
110 111 5.334414 GCACAACTTGAAACTAGACCAGATG 60.334 44.000 0.00 0.00 0.00 2.90
111 112 5.180117 CACAACTTGAAACTAGACCAGATGG 59.820 44.000 0.00 0.00 42.17 3.51
112 113 5.071788 ACAACTTGAAACTAGACCAGATGGA 59.928 40.000 5.72 0.00 38.94 3.41
113 114 6.176183 CAACTTGAAACTAGACCAGATGGAT 58.824 40.000 5.72 0.00 38.94 3.41
114 115 7.038302 ACAACTTGAAACTAGACCAGATGGATA 60.038 37.037 5.72 0.00 38.94 2.59
115 116 7.682787 ACTTGAAACTAGACCAGATGGATAT 57.317 36.000 5.72 0.00 38.94 1.63
116 117 7.504403 ACTTGAAACTAGACCAGATGGATATG 58.496 38.462 5.72 0.00 38.94 1.78
117 118 7.345653 ACTTGAAACTAGACCAGATGGATATGA 59.654 37.037 5.72 0.00 38.94 2.15
118 119 7.055667 TGAAACTAGACCAGATGGATATGAC 57.944 40.000 5.72 0.00 38.94 3.06
119 120 6.611236 TGAAACTAGACCAGATGGATATGACA 59.389 38.462 5.72 0.00 38.94 3.58
120 121 7.290948 TGAAACTAGACCAGATGGATATGACAT 59.709 37.037 5.72 0.00 38.94 3.06
121 122 6.602410 ACTAGACCAGATGGATATGACATG 57.398 41.667 5.72 0.00 38.94 3.21
122 123 4.283363 AGACCAGATGGATATGACATGC 57.717 45.455 5.72 0.00 38.94 4.06
123 124 3.908733 AGACCAGATGGATATGACATGCT 59.091 43.478 5.72 0.00 38.94 3.79
124 125 4.350225 AGACCAGATGGATATGACATGCTT 59.650 41.667 5.72 0.00 38.94 3.91
125 126 5.057843 ACCAGATGGATATGACATGCTTT 57.942 39.130 5.72 0.00 38.94 3.51
126 127 5.068636 ACCAGATGGATATGACATGCTTTC 58.931 41.667 5.72 0.00 38.94 2.62
127 128 5.163120 ACCAGATGGATATGACATGCTTTCT 60.163 40.000 5.72 0.00 38.94 2.52
128 129 5.768662 CCAGATGGATATGACATGCTTTCTT 59.231 40.000 0.00 0.00 37.39 2.52
129 130 6.294010 CCAGATGGATATGACATGCTTTCTTG 60.294 42.308 0.00 0.00 37.39 3.02
130 131 6.485648 CAGATGGATATGACATGCTTTCTTGA 59.514 38.462 0.00 0.00 0.00 3.02
131 132 7.012989 CAGATGGATATGACATGCTTTCTTGAA 59.987 37.037 0.00 0.00 0.00 2.69
132 133 7.724506 AGATGGATATGACATGCTTTCTTGAAT 59.275 33.333 0.00 0.00 0.00 2.57
133 134 7.268199 TGGATATGACATGCTTTCTTGAATC 57.732 36.000 0.00 0.00 0.00 2.52
134 135 6.829811 TGGATATGACATGCTTTCTTGAATCA 59.170 34.615 0.00 0.00 0.00 2.57
135 136 7.339976 TGGATATGACATGCTTTCTTGAATCAA 59.660 33.333 0.00 0.00 0.00 2.57
136 137 7.861372 GGATATGACATGCTTTCTTGAATCAAG 59.139 37.037 16.39 16.39 42.25 3.02
137 138 6.829229 ATGACATGCTTTCTTGAATCAAGA 57.171 33.333 20.61 20.61 46.93 3.02
148 149 6.672266 TCTTGAATCAAGAGGTAGTGAGTT 57.328 37.500 20.61 0.00 44.27 3.01
149 150 6.692486 TCTTGAATCAAGAGGTAGTGAGTTC 58.308 40.000 20.61 0.00 44.27 3.01
150 151 6.267699 TCTTGAATCAAGAGGTAGTGAGTTCA 59.732 38.462 20.61 0.00 44.27 3.18
151 152 6.419484 TGAATCAAGAGGTAGTGAGTTCAA 57.581 37.500 0.00 0.00 0.00 2.69
152 153 6.223852 TGAATCAAGAGGTAGTGAGTTCAAC 58.776 40.000 0.00 0.00 0.00 3.18
153 154 6.042093 TGAATCAAGAGGTAGTGAGTTCAACT 59.958 38.462 0.00 0.00 0.00 3.16
154 155 5.455056 TCAAGAGGTAGTGAGTTCAACTC 57.545 43.478 10.92 10.92 45.26 3.01
155 156 4.281182 TCAAGAGGTAGTGAGTTCAACTCC 59.719 45.833 15.20 6.51 44.44 3.85
156 157 3.166679 AGAGGTAGTGAGTTCAACTCCC 58.833 50.000 15.20 8.62 44.44 4.30
157 158 2.897969 GAGGTAGTGAGTTCAACTCCCA 59.102 50.000 15.20 0.00 44.44 4.37
158 159 2.633481 AGGTAGTGAGTTCAACTCCCAC 59.367 50.000 15.20 8.10 44.44 4.61
159 160 2.289506 GGTAGTGAGTTCAACTCCCACC 60.290 54.545 15.20 14.27 44.44 4.61
160 161 1.807814 AGTGAGTTCAACTCCCACCT 58.192 50.000 15.20 3.04 44.44 4.00
161 162 1.694696 AGTGAGTTCAACTCCCACCTC 59.305 52.381 15.20 0.00 44.44 3.85
162 163 1.416401 GTGAGTTCAACTCCCACCTCA 59.584 52.381 15.20 0.00 44.44 3.86
163 164 2.039084 GTGAGTTCAACTCCCACCTCAT 59.961 50.000 15.20 0.00 44.44 2.90
164 165 3.260884 GTGAGTTCAACTCCCACCTCATA 59.739 47.826 15.20 0.00 44.44 2.15
165 166 3.260884 TGAGTTCAACTCCCACCTCATAC 59.739 47.826 15.20 0.00 44.44 2.39
166 167 2.572104 AGTTCAACTCCCACCTCATACC 59.428 50.000 0.00 0.00 0.00 2.73
167 168 2.304761 GTTCAACTCCCACCTCATACCA 59.695 50.000 0.00 0.00 0.00 3.25
168 169 1.906574 TCAACTCCCACCTCATACCAC 59.093 52.381 0.00 0.00 0.00 4.16
169 170 1.909302 CAACTCCCACCTCATACCACT 59.091 52.381 0.00 0.00 0.00 4.00
170 171 2.305927 CAACTCCCACCTCATACCACTT 59.694 50.000 0.00 0.00 0.00 3.16
171 172 2.632537 ACTCCCACCTCATACCACTTT 58.367 47.619 0.00 0.00 0.00 2.66
172 173 2.986728 ACTCCCACCTCATACCACTTTT 59.013 45.455 0.00 0.00 0.00 2.27
173 174 3.397955 ACTCCCACCTCATACCACTTTTT 59.602 43.478 0.00 0.00 0.00 1.94
174 175 4.600111 ACTCCCACCTCATACCACTTTTTA 59.400 41.667 0.00 0.00 0.00 1.52
175 176 4.913784 TCCCACCTCATACCACTTTTTAC 58.086 43.478 0.00 0.00 0.00 2.01
176 177 4.014406 CCCACCTCATACCACTTTTTACC 58.986 47.826 0.00 0.00 0.00 2.85
177 178 4.507691 CCCACCTCATACCACTTTTTACCA 60.508 45.833 0.00 0.00 0.00 3.25
178 179 5.261216 CCACCTCATACCACTTTTTACCAT 58.739 41.667 0.00 0.00 0.00 3.55
179 180 5.125417 CCACCTCATACCACTTTTTACCATG 59.875 44.000 0.00 0.00 0.00 3.66
180 181 5.710099 CACCTCATACCACTTTTTACCATGT 59.290 40.000 0.00 0.00 0.00 3.21
181 182 6.208599 CACCTCATACCACTTTTTACCATGTT 59.791 38.462 0.00 0.00 0.00 2.71
182 183 6.780522 ACCTCATACCACTTTTTACCATGTTT 59.219 34.615 0.00 0.00 0.00 2.83
183 184 7.289084 ACCTCATACCACTTTTTACCATGTTTT 59.711 33.333 0.00 0.00 0.00 2.43
184 185 8.147704 CCTCATACCACTTTTTACCATGTTTTT 58.852 33.333 0.00 0.00 0.00 1.94
206 207 7.982761 TTTTTCTACCACGCTAGGAAATAAA 57.017 32.000 0.00 0.00 0.00 1.40
207 208 7.982761 TTTTCTACCACGCTAGGAAATAAAA 57.017 32.000 0.00 0.00 0.00 1.52
208 209 8.570068 TTTTCTACCACGCTAGGAAATAAAAT 57.430 30.769 0.00 0.00 0.00 1.82
209 210 7.548196 TTCTACCACGCTAGGAAATAAAATG 57.452 36.000 0.00 0.00 0.00 2.32
210 211 6.880484 TCTACCACGCTAGGAAATAAAATGA 58.120 36.000 0.00 0.00 0.00 2.57
211 212 7.332557 TCTACCACGCTAGGAAATAAAATGAA 58.667 34.615 0.00 0.00 0.00 2.57
212 213 6.436843 ACCACGCTAGGAAATAAAATGAAG 57.563 37.500 0.00 0.00 0.00 3.02
213 214 5.163652 ACCACGCTAGGAAATAAAATGAAGC 60.164 40.000 0.00 0.00 0.00 3.86
215 216 4.527564 CGCTAGGAAATAAAATGAAGCGG 58.472 43.478 5.55 0.00 45.64 5.52
216 217 4.554723 CGCTAGGAAATAAAATGAAGCGGG 60.555 45.833 5.55 0.00 45.64 6.13
217 218 4.578928 GCTAGGAAATAAAATGAAGCGGGA 59.421 41.667 0.00 0.00 0.00 5.14
218 219 5.067283 GCTAGGAAATAAAATGAAGCGGGAA 59.933 40.000 0.00 0.00 0.00 3.97
219 220 5.993748 AGGAAATAAAATGAAGCGGGAAA 57.006 34.783 0.00 0.00 0.00 3.13
220 221 6.353404 AGGAAATAAAATGAAGCGGGAAAA 57.647 33.333 0.00 0.00 0.00 2.29
221 222 6.398095 AGGAAATAAAATGAAGCGGGAAAAG 58.602 36.000 0.00 0.00 0.00 2.27
222 223 5.063438 GGAAATAAAATGAAGCGGGAAAAGC 59.937 40.000 0.00 0.00 0.00 3.51
223 224 2.064573 AAAATGAAGCGGGAAAAGCG 57.935 45.000 0.00 0.00 40.04 4.68
224 225 1.243902 AAATGAAGCGGGAAAAGCGA 58.756 45.000 0.00 0.00 40.04 4.93
225 226 1.463674 AATGAAGCGGGAAAAGCGAT 58.536 45.000 0.00 0.00 40.04 4.58
226 227 0.734889 ATGAAGCGGGAAAAGCGATG 59.265 50.000 0.00 0.00 40.04 3.84
227 228 1.305219 TGAAGCGGGAAAAGCGATGG 61.305 55.000 0.00 0.00 40.04 3.51
228 229 1.993369 GAAGCGGGAAAAGCGATGGG 61.993 60.000 0.00 0.00 40.04 4.00
229 230 2.437716 GCGGGAAAAGCGATGGGA 60.438 61.111 0.00 0.00 0.00 4.37
230 231 1.823899 GCGGGAAAAGCGATGGGAT 60.824 57.895 0.00 0.00 0.00 3.85
231 232 2.024918 CGGGAAAAGCGATGGGATG 58.975 57.895 0.00 0.00 0.00 3.51
232 233 1.447317 CGGGAAAAGCGATGGGATGG 61.447 60.000 0.00 0.00 0.00 3.51
233 234 1.109323 GGGAAAAGCGATGGGATGGG 61.109 60.000 0.00 0.00 0.00 4.00
234 235 0.106719 GGAAAAGCGATGGGATGGGA 60.107 55.000 0.00 0.00 0.00 4.37
235 236 1.479389 GGAAAAGCGATGGGATGGGAT 60.479 52.381 0.00 0.00 0.00 3.85
236 237 1.882623 GAAAAGCGATGGGATGGGATC 59.117 52.381 0.00 0.00 0.00 3.36
237 238 0.250467 AAAGCGATGGGATGGGATCG 60.250 55.000 0.00 0.00 43.49 3.69
238 239 1.121407 AAGCGATGGGATGGGATCGA 61.121 55.000 0.00 0.00 43.36 3.59
239 240 1.079543 GCGATGGGATGGGATCGAG 60.080 63.158 0.00 0.00 43.36 4.04
240 241 1.536073 GCGATGGGATGGGATCGAGA 61.536 60.000 0.00 0.00 43.36 4.04
241 242 0.969149 CGATGGGATGGGATCGAGAA 59.031 55.000 0.00 0.00 43.36 2.87
242 243 1.344438 CGATGGGATGGGATCGAGAAA 59.656 52.381 0.00 0.00 43.36 2.52
243 244 2.611473 CGATGGGATGGGATCGAGAAAG 60.611 54.545 0.00 0.00 43.36 2.62
244 245 2.174685 TGGGATGGGATCGAGAAAGA 57.825 50.000 0.00 0.00 0.00 2.52
245 246 2.477245 TGGGATGGGATCGAGAAAGAA 58.523 47.619 0.00 0.00 0.00 2.52
246 247 2.435805 TGGGATGGGATCGAGAAAGAAG 59.564 50.000 0.00 0.00 0.00 2.85
247 248 2.224402 GGGATGGGATCGAGAAAGAAGG 60.224 54.545 0.00 0.00 0.00 3.46
248 249 2.700897 GGATGGGATCGAGAAAGAAGGA 59.299 50.000 0.00 0.00 0.00 3.36
249 250 3.326297 GGATGGGATCGAGAAAGAAGGAT 59.674 47.826 0.00 0.00 0.00 3.24
250 251 3.827008 TGGGATCGAGAAAGAAGGATG 57.173 47.619 0.00 0.00 0.00 3.51
251 252 3.107601 TGGGATCGAGAAAGAAGGATGT 58.892 45.455 0.00 0.00 0.00 3.06
252 253 3.118629 TGGGATCGAGAAAGAAGGATGTG 60.119 47.826 0.00 0.00 0.00 3.21
253 254 2.869192 GGATCGAGAAAGAAGGATGTGC 59.131 50.000 0.00 0.00 0.00 4.57
254 255 1.996292 TCGAGAAAGAAGGATGTGCG 58.004 50.000 0.00 0.00 0.00 5.34
255 256 0.371645 CGAGAAAGAAGGATGTGCGC 59.628 55.000 0.00 0.00 0.00 6.09
256 257 0.729690 GAGAAAGAAGGATGTGCGCC 59.270 55.000 4.18 0.00 0.00 6.53
257 258 0.036732 AGAAAGAAGGATGTGCGCCA 59.963 50.000 4.18 2.31 0.00 5.69
258 259 0.449388 GAAAGAAGGATGTGCGCCAG 59.551 55.000 4.18 0.00 0.00 4.85
259 260 0.962356 AAAGAAGGATGTGCGCCAGG 60.962 55.000 4.18 0.00 0.00 4.45
260 261 1.841302 AAGAAGGATGTGCGCCAGGA 61.841 55.000 4.18 0.00 0.00 3.86
261 262 1.377202 GAAGGATGTGCGCCAGGAA 60.377 57.895 4.18 0.00 0.00 3.36
262 263 0.960364 GAAGGATGTGCGCCAGGAAA 60.960 55.000 4.18 0.00 0.00 3.13
263 264 0.539438 AAGGATGTGCGCCAGGAAAA 60.539 50.000 4.18 0.00 0.00 2.29
264 265 1.212751 GGATGTGCGCCAGGAAAAC 59.787 57.895 4.18 0.00 0.00 2.43
265 266 1.212751 GATGTGCGCCAGGAAAACC 59.787 57.895 4.18 0.00 0.00 3.27
266 267 2.527547 GATGTGCGCCAGGAAAACCG 62.528 60.000 4.18 0.00 0.00 4.44
267 268 4.700365 GTGCGCCAGGAAAACCGC 62.700 66.667 4.18 1.70 45.99 5.68
269 270 4.700365 GCGCCAGGAAAACCGCAC 62.700 66.667 0.00 0.00 45.21 5.34
270 271 4.383602 CGCCAGGAAAACCGCACG 62.384 66.667 0.00 0.00 0.00 5.34
271 272 4.038080 GCCAGGAAAACCGCACGG 62.038 66.667 7.71 7.71 42.03 4.94
272 273 3.361977 CCAGGAAAACCGCACGGG 61.362 66.667 14.51 0.00 43.62 5.28
273 274 2.281208 CAGGAAAACCGCACGGGA 60.281 61.111 14.51 0.00 39.97 5.14
274 275 1.674322 CAGGAAAACCGCACGGGAT 60.674 57.895 14.51 0.00 39.97 3.85
275 276 1.074248 AGGAAAACCGCACGGGATT 59.926 52.632 14.51 7.65 39.97 3.01
276 277 0.538746 AGGAAAACCGCACGGGATTT 60.539 50.000 14.51 13.57 42.86 2.17
277 278 3.394800 GAAAACCGCACGGGATTTC 57.605 52.632 19.72 19.72 46.26 2.17
278 279 0.453782 GAAAACCGCACGGGATTTCG 60.454 55.000 19.72 0.00 44.46 3.46
279 280 1.858372 AAAACCGCACGGGATTTCGG 61.858 55.000 14.51 0.00 46.61 4.30
280 281 2.734948 AAACCGCACGGGATTTCGGA 62.735 55.000 14.51 0.00 44.23 4.55
281 282 2.203015 CCGCACGGGATTTCGGAT 60.203 61.111 0.00 0.00 44.23 4.18
282 283 2.244651 CCGCACGGGATTTCGGATC 61.245 63.158 0.00 0.00 44.23 3.36
283 284 1.227263 CGCACGGGATTTCGGATCT 60.227 57.895 0.00 0.00 0.00 2.75
284 285 1.490693 CGCACGGGATTTCGGATCTG 61.491 60.000 0.00 0.00 0.00 2.90
285 286 0.462047 GCACGGGATTTCGGATCTGT 60.462 55.000 0.42 0.00 0.00 3.41
286 287 2.012051 GCACGGGATTTCGGATCTGTT 61.012 52.381 0.42 0.00 0.00 3.16
287 288 2.356135 CACGGGATTTCGGATCTGTTT 58.644 47.619 0.42 0.00 0.00 2.83
288 289 3.527533 CACGGGATTTCGGATCTGTTTA 58.472 45.455 0.42 0.00 0.00 2.01
289 290 3.555956 CACGGGATTTCGGATCTGTTTAG 59.444 47.826 0.42 0.00 0.00 1.85
290 291 2.544267 CGGGATTTCGGATCTGTTTAGC 59.456 50.000 0.42 0.00 0.00 3.09
291 292 3.541632 GGGATTTCGGATCTGTTTAGCA 58.458 45.455 0.42 0.00 0.00 3.49
292 293 3.312697 GGGATTTCGGATCTGTTTAGCAC 59.687 47.826 0.42 0.00 0.00 4.40
293 294 3.938963 GGATTTCGGATCTGTTTAGCACA 59.061 43.478 0.42 0.00 0.00 4.57
304 305 4.804868 TGTTTAGCACAGTCCGGTATAA 57.195 40.909 0.00 0.00 0.00 0.98
305 306 5.149973 TGTTTAGCACAGTCCGGTATAAA 57.850 39.130 0.00 0.00 0.00 1.40
306 307 5.736813 TGTTTAGCACAGTCCGGTATAAAT 58.263 37.500 0.00 0.00 0.00 1.40
307 308 6.876155 TGTTTAGCACAGTCCGGTATAAATA 58.124 36.000 0.00 0.00 0.00 1.40
308 309 7.502696 TGTTTAGCACAGTCCGGTATAAATAT 58.497 34.615 0.00 0.00 0.00 1.28
309 310 7.988599 TGTTTAGCACAGTCCGGTATAAATATT 59.011 33.333 0.00 0.00 0.00 1.28
310 311 9.480053 GTTTAGCACAGTCCGGTATAAATATTA 57.520 33.333 0.00 0.00 0.00 0.98
311 312 9.480053 TTTAGCACAGTCCGGTATAAATATTAC 57.520 33.333 0.00 0.00 0.00 1.89
312 313 6.461640 AGCACAGTCCGGTATAAATATTACC 58.538 40.000 0.00 0.00 0.00 2.85
313 314 5.640783 GCACAGTCCGGTATAAATATTACCC 59.359 44.000 0.00 0.00 0.00 3.69
314 315 6.742082 GCACAGTCCGGTATAAATATTACCCA 60.742 42.308 0.00 0.00 0.00 4.51
315 316 7.218614 CACAGTCCGGTATAAATATTACCCAA 58.781 38.462 0.00 0.00 0.00 4.12
316 317 7.172019 CACAGTCCGGTATAAATATTACCCAAC 59.828 40.741 0.00 0.61 0.00 3.77
317 318 6.652062 CAGTCCGGTATAAATATTACCCAACC 59.348 42.308 0.00 0.00 0.00 3.77
318 319 6.559921 AGTCCGGTATAAATATTACCCAACCT 59.440 38.462 0.00 0.00 0.00 3.50
319 320 7.734410 AGTCCGGTATAAATATTACCCAACCTA 59.266 37.037 0.00 0.00 0.00 3.08
320 321 8.374743 GTCCGGTATAAATATTACCCAACCTAA 58.625 37.037 0.00 0.00 0.00 2.69
321 322 8.943085 TCCGGTATAAATATTACCCAACCTAAA 58.057 33.333 0.00 0.00 0.00 1.85
322 323 9.743581 CCGGTATAAATATTACCCAACCTAAAT 57.256 33.333 0.00 0.00 0.00 1.40
352 353 7.689299 GCTAGAATTTAAGCTAGTTCAGTTGG 58.311 38.462 0.00 0.00 37.13 3.77
353 354 7.334671 GCTAGAATTTAAGCTAGTTCAGTTGGT 59.665 37.037 0.00 0.00 37.13 3.67
354 355 9.220767 CTAGAATTTAAGCTAGTTCAGTTGGTT 57.779 33.333 0.00 0.00 31.62 3.67
355 356 7.875971 AGAATTTAAGCTAGTTCAGTTGGTTG 58.124 34.615 0.00 0.00 0.00 3.77
356 357 7.502561 AGAATTTAAGCTAGTTCAGTTGGTTGT 59.497 33.333 0.00 0.00 0.00 3.32
357 358 6.371809 TTTAAGCTAGTTCAGTTGGTTGTG 57.628 37.500 0.00 0.00 0.00 3.33
358 359 3.838244 AGCTAGTTCAGTTGGTTGTGA 57.162 42.857 0.00 0.00 0.00 3.58
359 360 4.150897 AGCTAGTTCAGTTGGTTGTGAA 57.849 40.909 0.00 0.00 0.00 3.18
364 365 2.418368 TCAGTTGGTTGTGAACAGCT 57.582 45.000 0.00 0.00 0.00 4.24
365 366 3.552132 TCAGTTGGTTGTGAACAGCTA 57.448 42.857 0.00 0.00 0.00 3.32
366 367 4.085357 TCAGTTGGTTGTGAACAGCTAT 57.915 40.909 0.00 0.00 0.00 2.97
367 368 3.814842 TCAGTTGGTTGTGAACAGCTATG 59.185 43.478 0.00 0.00 0.00 2.23
368 369 3.058016 CAGTTGGTTGTGAACAGCTATGG 60.058 47.826 0.00 0.00 0.00 2.74
369 370 2.884639 GTTGGTTGTGAACAGCTATGGT 59.115 45.455 0.00 0.00 0.00 3.55
370 371 2.503331 TGGTTGTGAACAGCTATGGTG 58.497 47.619 0.00 0.00 37.06 4.17
371 372 2.105649 TGGTTGTGAACAGCTATGGTGA 59.894 45.455 3.70 0.00 34.87 4.02
372 373 3.146066 GGTTGTGAACAGCTATGGTGAA 58.854 45.455 3.70 0.00 34.87 3.18
373 374 3.058224 GGTTGTGAACAGCTATGGTGAAC 60.058 47.826 3.70 0.00 34.87 3.18
374 375 2.778299 TGTGAACAGCTATGGTGAACC 58.222 47.619 3.70 0.00 34.87 3.62
375 376 1.732259 GTGAACAGCTATGGTGAACCG 59.268 52.381 3.70 0.00 39.43 4.44
376 377 1.346395 TGAACAGCTATGGTGAACCGT 59.654 47.619 3.70 0.00 39.43 4.83
377 378 2.563620 TGAACAGCTATGGTGAACCGTA 59.436 45.455 3.70 1.55 39.43 4.02
394 395 3.227810 CGTAGGTAGTGGGTTTGAGTC 57.772 52.381 0.00 0.00 0.00 3.36
395 396 2.094338 CGTAGGTAGTGGGTTTGAGTCC 60.094 54.545 0.00 0.00 0.00 3.85
396 397 1.359168 AGGTAGTGGGTTTGAGTCCC 58.641 55.000 0.00 0.00 44.81 4.46
397 398 0.327259 GGTAGTGGGTTTGAGTCCCC 59.673 60.000 0.00 0.00 44.00 4.81
400 401 4.430388 TGGGTTTGAGTCCCCACT 57.570 55.556 1.71 0.00 46.06 4.00
401 402 2.640473 TGGGTTTGAGTCCCCACTT 58.360 52.632 1.71 0.00 46.06 3.16
402 403 0.930726 TGGGTTTGAGTCCCCACTTT 59.069 50.000 1.71 0.00 46.06 2.66
403 404 1.328279 GGGTTTGAGTCCCCACTTTG 58.672 55.000 0.00 0.00 40.88 2.77
404 405 1.411074 GGGTTTGAGTCCCCACTTTGT 60.411 52.381 0.00 0.00 40.88 2.83
405 406 2.158579 GGGTTTGAGTCCCCACTTTGTA 60.159 50.000 0.00 0.00 40.88 2.41
406 407 2.882761 GGTTTGAGTCCCCACTTTGTAC 59.117 50.000 0.00 0.00 30.63 2.90
407 408 3.547746 GTTTGAGTCCCCACTTTGTACA 58.452 45.455 0.00 0.00 30.63 2.90
408 409 2.922740 TGAGTCCCCACTTTGTACAC 57.077 50.000 0.00 0.00 30.63 2.90
409 410 2.404559 TGAGTCCCCACTTTGTACACT 58.595 47.619 0.00 0.00 30.63 3.55
410 411 2.775384 TGAGTCCCCACTTTGTACACTT 59.225 45.455 0.00 0.00 30.63 3.16
411 412 3.201266 TGAGTCCCCACTTTGTACACTTT 59.799 43.478 0.00 0.00 30.63 2.66
412 413 4.204799 GAGTCCCCACTTTGTACACTTTT 58.795 43.478 0.00 0.00 30.63 2.27
413 414 4.606210 AGTCCCCACTTTGTACACTTTTT 58.394 39.130 0.00 0.00 0.00 1.94
447 448 1.463375 AAAAACGGGGGAAGGGAGG 59.537 57.895 0.00 0.00 0.00 4.30
448 449 2.089116 AAAAACGGGGGAAGGGAGGG 62.089 60.000 0.00 0.00 0.00 4.30
451 452 4.752594 CGGGGGAAGGGAGGGGAA 62.753 72.222 0.00 0.00 0.00 3.97
452 453 3.021880 GGGGGAAGGGAGGGGAAC 61.022 72.222 0.00 0.00 0.00 3.62
453 454 3.408853 GGGGAAGGGAGGGGAACG 61.409 72.222 0.00 0.00 0.00 3.95
454 455 2.285144 GGGAAGGGAGGGGAACGA 60.285 66.667 0.00 0.00 0.00 3.85
455 456 1.921857 GGGAAGGGAGGGGAACGAA 60.922 63.158 0.00 0.00 0.00 3.85
456 457 1.602771 GGAAGGGAGGGGAACGAAG 59.397 63.158 0.00 0.00 0.00 3.79
457 458 1.078356 GAAGGGAGGGGAACGAAGC 60.078 63.158 0.00 0.00 0.00 3.86
458 459 2.854187 GAAGGGAGGGGAACGAAGCG 62.854 65.000 0.00 0.00 0.00 4.68
459 460 4.468689 GGGAGGGGAACGAAGCGG 62.469 72.222 0.00 0.00 0.00 5.52
460 461 4.468689 GGAGGGGAACGAAGCGGG 62.469 72.222 0.00 0.00 0.00 6.13
461 462 4.468689 GAGGGGAACGAAGCGGGG 62.469 72.222 0.00 0.00 0.00 5.73
463 464 4.468689 GGGGAACGAAGCGGGGAG 62.469 72.222 0.00 0.00 0.00 4.30
476 477 3.541713 GGGAGCGGGAGAAGCGAT 61.542 66.667 0.00 0.00 40.04 4.58
477 478 2.028337 GGAGCGGGAGAAGCGATC 59.972 66.667 0.00 0.00 40.04 3.69
478 479 2.354072 GAGCGGGAGAAGCGATCG 60.354 66.667 11.69 11.69 40.04 3.69
479 480 3.127352 GAGCGGGAGAAGCGATCGT 62.127 63.158 17.81 0.00 40.04 3.73
480 481 2.956964 GCGGGAGAAGCGATCGTG 60.957 66.667 17.81 0.00 0.00 4.35
481 482 2.956964 CGGGAGAAGCGATCGTGC 60.957 66.667 17.81 6.44 0.00 5.34
482 483 2.956964 GGGAGAAGCGATCGTGCG 60.957 66.667 17.81 0.00 40.67 5.34
483 484 2.956964 GGAGAAGCGATCGTGCGG 60.957 66.667 17.81 0.00 40.67 5.69
484 485 2.102357 GAGAAGCGATCGTGCGGA 59.898 61.111 17.81 0.00 40.67 5.54
485 486 1.299468 GAGAAGCGATCGTGCGGAT 60.299 57.895 17.81 0.00 40.67 4.18
486 487 1.272114 GAGAAGCGATCGTGCGGATC 61.272 60.000 17.81 7.35 46.70 3.36
491 492 3.909312 GATCGTGCGGATCTGTCG 58.091 61.111 2.89 8.89 46.66 4.35
499 500 3.967886 CGGATCTGTCGCTAACCAT 57.032 52.632 0.00 0.00 0.00 3.55
500 501 2.225068 CGGATCTGTCGCTAACCATT 57.775 50.000 0.00 0.00 0.00 3.16
501 502 1.860950 CGGATCTGTCGCTAACCATTG 59.139 52.381 0.00 0.00 0.00 2.82
502 503 2.738643 CGGATCTGTCGCTAACCATTGT 60.739 50.000 0.00 0.00 0.00 2.71
503 504 3.270877 GGATCTGTCGCTAACCATTGTT 58.729 45.455 0.00 0.00 38.52 2.83
504 505 3.689649 GGATCTGTCGCTAACCATTGTTT 59.310 43.478 0.00 0.00 35.87 2.83
505 506 4.156008 GGATCTGTCGCTAACCATTGTTTT 59.844 41.667 0.00 0.00 35.87 2.43
506 507 5.335661 GGATCTGTCGCTAACCATTGTTTTT 60.336 40.000 0.00 0.00 35.87 1.94
507 508 6.128117 GGATCTGTCGCTAACCATTGTTTTTA 60.128 38.462 0.00 0.00 35.87 1.52
508 509 6.811253 TCTGTCGCTAACCATTGTTTTTAT 57.189 33.333 0.00 0.00 35.87 1.40
509 510 7.908827 TCTGTCGCTAACCATTGTTTTTATA 57.091 32.000 0.00 0.00 35.87 0.98
510 511 8.500753 TCTGTCGCTAACCATTGTTTTTATAT 57.499 30.769 0.00 0.00 35.87 0.86
511 512 9.602568 TCTGTCGCTAACCATTGTTTTTATATA 57.397 29.630 0.00 0.00 35.87 0.86
535 536 7.986085 ATGAACAGTTTGTTAGAGTAGCATT 57.014 32.000 0.00 0.00 41.28 3.56
536 537 7.801716 TGAACAGTTTGTTAGAGTAGCATTT 57.198 32.000 0.00 0.00 41.28 2.32
537 538 8.220755 TGAACAGTTTGTTAGAGTAGCATTTT 57.779 30.769 0.00 0.00 41.28 1.82
538 539 8.682710 TGAACAGTTTGTTAGAGTAGCATTTTT 58.317 29.630 0.00 0.00 41.28 1.94
563 564 9.816787 TTTACCCAGATAATTCAAAAGTTAGGT 57.183 29.630 0.00 0.00 0.00 3.08
566 567 9.990868 ACCCAGATAATTCAAAAGTTAGGTATT 57.009 29.630 0.00 0.00 0.00 1.89
576 577 9.733219 TTCAAAAGTTAGGTATTTTTACGGTTG 57.267 29.630 0.00 0.00 0.00 3.77
577 578 8.351461 TCAAAAGTTAGGTATTTTTACGGTTGG 58.649 33.333 0.00 0.00 0.00 3.77
578 579 8.351461 CAAAAGTTAGGTATTTTTACGGTTGGA 58.649 33.333 0.00 0.00 0.00 3.53
579 580 7.439157 AAGTTAGGTATTTTTACGGTTGGAC 57.561 36.000 0.00 0.00 0.00 4.02
580 581 6.772605 AGTTAGGTATTTTTACGGTTGGACT 58.227 36.000 0.00 0.00 0.00 3.85
581 582 7.906327 AGTTAGGTATTTTTACGGTTGGACTA 58.094 34.615 0.00 0.00 0.00 2.59
582 583 8.542926 AGTTAGGTATTTTTACGGTTGGACTAT 58.457 33.333 0.00 0.00 0.00 2.12
583 584 8.820933 GTTAGGTATTTTTACGGTTGGACTATC 58.179 37.037 0.00 0.00 0.00 2.08
584 585 7.191593 AGGTATTTTTACGGTTGGACTATCT 57.808 36.000 0.00 0.00 0.00 1.98
585 586 8.310122 AGGTATTTTTACGGTTGGACTATCTA 57.690 34.615 0.00 0.00 0.00 1.98
586 587 8.931568 AGGTATTTTTACGGTTGGACTATCTAT 58.068 33.333 0.00 0.00 0.00 1.98
587 588 9.551734 GGTATTTTTACGGTTGGACTATCTATT 57.448 33.333 0.00 0.00 0.00 1.73
590 591 9.675464 ATTTTTACGGTTGGACTATCTATTGAA 57.325 29.630 0.00 0.00 0.00 2.69
591 592 8.712285 TTTTACGGTTGGACTATCTATTGAAG 57.288 34.615 0.00 0.00 0.00 3.02
592 593 7.649533 TTACGGTTGGACTATCTATTGAAGA 57.350 36.000 0.00 0.00 39.02 2.87
593 594 6.732896 ACGGTTGGACTATCTATTGAAGAT 57.267 37.500 0.00 0.00 46.95 2.40
594 595 6.516718 ACGGTTGGACTATCTATTGAAGATG 58.483 40.000 0.00 0.00 44.95 2.90
595 596 5.406780 CGGTTGGACTATCTATTGAAGATGC 59.593 44.000 0.00 0.00 44.95 3.91
600 601 8.712228 TGGACTATCTATTGAAGATGCTCTAA 57.288 34.615 0.00 0.00 44.95 2.10
642 643 1.227823 CACCTCTGTTTCCCGCACA 60.228 57.895 0.00 0.00 0.00 4.57
654 655 1.004161 TCCCGCACAAAATCATCTCCA 59.996 47.619 0.00 0.00 0.00 3.86
685 735 2.330231 TGATGTTGCTAAAGCGTTGC 57.670 45.000 0.00 0.00 45.83 4.17
686 736 1.068610 TGATGTTGCTAAAGCGTTGCC 60.069 47.619 0.00 0.00 45.83 4.52
716 766 0.524862 GACTCCGACTTCCTAACGCA 59.475 55.000 0.00 0.00 0.00 5.24
750 801 7.094205 GGCTCCTGAGTCAGATTTAAATTGAAA 60.094 37.037 22.09 0.00 32.44 2.69
752 803 8.690203 TCCTGAGTCAGATTTAAATTGAAACA 57.310 30.769 22.09 9.80 32.44 2.83
753 804 8.567948 TCCTGAGTCAGATTTAAATTGAAACAC 58.432 33.333 22.09 0.00 32.44 3.32
754 805 7.809806 CCTGAGTCAGATTTAAATTGAAACACC 59.190 37.037 22.09 0.00 32.44 4.16
755 806 8.231692 TGAGTCAGATTTAAATTGAAACACCA 57.768 30.769 1.43 0.47 0.00 4.17
756 807 8.134895 TGAGTCAGATTTAAATTGAAACACCAC 58.865 33.333 1.43 0.00 0.00 4.16
757 808 8.006298 AGTCAGATTTAAATTGAAACACCACA 57.994 30.769 1.43 0.00 0.00 4.17
758 809 8.474025 AGTCAGATTTAAATTGAAACACCACAA 58.526 29.630 1.43 0.00 0.00 3.33
759 810 8.755018 GTCAGATTTAAATTGAAACACCACAAG 58.245 33.333 1.43 0.00 0.00 3.16
850 901 3.844577 AATCACGCTAGTACGAGTGTT 57.155 42.857 18.11 4.00 38.10 3.32
851 902 4.952262 AATCACGCTAGTACGAGTGTTA 57.048 40.909 18.11 11.98 38.10 2.41
852 903 5.496133 AATCACGCTAGTACGAGTGTTAT 57.504 39.130 18.11 13.61 38.10 1.89
853 904 4.526970 TCACGCTAGTACGAGTGTTATC 57.473 45.455 18.11 0.00 38.10 1.75
861 920 0.524862 ACGAGTGTTATCTTCGCCGT 59.475 50.000 0.00 0.00 0.00 5.68
933 1017 4.571243 CCACGAAACAAGGGTGGT 57.429 55.556 1.37 0.00 44.82 4.16
934 1018 2.029743 CCACGAAACAAGGGTGGTG 58.970 57.895 1.37 0.00 44.82 4.17
940 1024 1.609072 GAAACAAGGGTGGTGCTCTTC 59.391 52.381 0.00 0.00 35.26 2.87
945 1029 0.616111 AGGGTGGTGCTCTTCGATCT 60.616 55.000 0.00 0.00 0.00 2.75
1211 1295 3.130160 GGCAGAAGAAGCCGCCAG 61.130 66.667 0.00 0.00 44.25 4.85
1222 1306 2.361610 CCGCCAGGACAGCCAAAT 60.362 61.111 0.00 0.00 41.02 2.32
1263 1347 4.103103 GCAAAGGAAGCCGCGGAC 62.103 66.667 33.48 20.78 0.00 4.79
1290 1374 3.068881 CGGCTGGAGGACAAGGAA 58.931 61.111 0.00 0.00 0.00 3.36
1293 1377 0.955919 GGCTGGAGGACAAGGAAACG 60.956 60.000 0.00 0.00 0.00 3.60
1329 1413 1.807573 GGAAGAGCTGTTCGCCTCG 60.808 63.158 16.61 0.00 40.39 4.63
1331 1415 0.800300 GAAGAGCTGTTCGCCTCGAG 60.800 60.000 7.97 5.13 40.39 4.04
1366 1450 1.132453 GGAACAAATTCTACGCCTGCC 59.868 52.381 0.00 0.00 34.98 4.85
1409 1493 4.581824 CCATCAAACCAGTAATCATCCCAG 59.418 45.833 0.00 0.00 0.00 4.45
1426 1514 2.580589 CCAGTTTATTTGTGTTCCGCG 58.419 47.619 0.00 0.00 0.00 6.46
1430 1518 2.973419 TTATTTGTGTTCCGCGGTTC 57.027 45.000 27.15 19.14 0.00 3.62
1434 1522 0.658897 TTGTGTTCCGCGGTTCTTTC 59.341 50.000 27.15 12.31 0.00 2.62
1472 1560 9.929722 GCAAGTTTAATATGATGACGTAAATGA 57.070 29.630 0.00 0.00 0.00 2.57
1604 1851 1.407979 CGTTATACGTCCCCTGCTTCT 59.592 52.381 0.00 0.00 36.74 2.85
1611 1858 1.228894 TCCCCTGCTTCTCGTGACT 60.229 57.895 0.00 0.00 0.00 3.41
1620 1867 2.266376 TTCTCGTGACTCGCCCGATG 62.266 60.000 0.00 0.00 39.67 3.84
1627 1874 4.240103 CTCGCCCGATGCCATGGA 62.240 66.667 18.40 0.31 36.24 3.41
1656 1903 5.409643 ACAGTTCAAGTCAGTCAAAATCG 57.590 39.130 0.00 0.00 0.00 3.34
1700 1947 2.355009 CCGCTGCAAGTGTTTGGC 60.355 61.111 0.00 0.00 44.74 4.52
1781 2028 0.471617 ATAGCTGCCAGACCATCACC 59.528 55.000 0.00 0.00 0.00 4.02
1807 2054 9.021863 CGAAGAGGTTTGTATATTCTTACTCAC 57.978 37.037 0.00 0.00 0.00 3.51
1994 2245 8.318412 TCCACTTTGATGCAGTCTTATTACTAA 58.682 33.333 0.00 0.00 0.00 2.24
1995 2246 8.607459 CCACTTTGATGCAGTCTTATTACTAAG 58.393 37.037 0.00 0.00 36.46 2.18
1996 2247 9.155975 CACTTTGATGCAGTCTTATTACTAAGT 57.844 33.333 0.00 0.00 36.51 2.24
2132 2383 0.112412 TTCCCTGAAAGTCAAGGGCC 59.888 55.000 0.00 0.00 35.87 5.80
2181 2432 6.345298 TGAGTGATCTTGTTGTGACTTACAA 58.655 36.000 0.00 4.36 46.62 2.41
2338 2589 1.813513 GTGTATTCACTGCTGGCACT 58.186 50.000 0.00 0.00 40.98 4.40
2356 2607 4.383552 GGCACTTCTACTGATGATGTCCTT 60.384 45.833 0.00 0.00 0.00 3.36
2446 2700 0.307760 GCGTGGTTTCTGTTGGACTG 59.692 55.000 0.00 0.00 0.00 3.51
2466 2720 4.884164 ACTGGAGAAGTTTCTGAAGGTTTG 59.116 41.667 0.00 0.00 37.73 2.93
2587 2841 4.737855 TGGCTTCTGTAGTATGGAAGTC 57.262 45.455 10.69 10.69 40.70 3.01
2641 2895 8.918961 AGTGACTTGTTCTTATAATTCTCTCG 57.081 34.615 0.00 0.00 0.00 4.04
2642 2896 8.740906 AGTGACTTGTTCTTATAATTCTCTCGA 58.259 33.333 0.00 0.00 0.00 4.04
2661 2915 2.157668 CGAGAGACACCATTTGAAACCG 59.842 50.000 0.00 0.00 0.00 4.44
2673 2927 5.925969 CCATTTGAAACCGCTTACATTTTCT 59.074 36.000 0.00 0.00 0.00 2.52
2736 2990 1.298157 GCTACGCACTGATGTGGCAA 61.298 55.000 0.00 0.00 43.97 4.52
2739 2993 0.030638 ACGCACTGATGTGGCAAAAC 59.969 50.000 0.00 0.00 43.97 2.43
2744 2998 2.485426 CACTGATGTGGCAAAACGAGAT 59.515 45.455 0.00 0.00 40.33 2.75
2749 3003 0.373716 GTGGCAAAACGAGATAGCGG 59.626 55.000 0.00 0.00 35.12 5.52
2836 3090 0.327924 ATGATTTCCGTGGCAGTCCA 59.672 50.000 0.00 0.00 40.85 4.02
2999 3253 3.921677 ACACGTGTAATTCTGGGTACAG 58.078 45.455 21.98 0.00 46.30 2.74
3002 3256 2.498481 CGTGTAATTCTGGGTACAGGGA 59.502 50.000 0.00 0.00 44.99 4.20
3018 3272 1.153229 GGACAGGTACCATTCCCGC 60.153 63.158 15.94 0.00 0.00 6.13
3098 3352 3.536075 ATTTTCTCCCTTTTCCCCGAA 57.464 42.857 0.00 0.00 0.00 4.30
3140 4421 2.482839 GCTTCTAGCGCTTCCTCATCTT 60.483 50.000 18.68 0.00 0.00 2.40
3162 4443 1.480789 GGGTGGGCATAAAAACCGAT 58.519 50.000 0.00 0.00 33.24 4.18
3194 4475 1.153597 AAACCGAAACCGACACCGAC 61.154 55.000 0.00 0.00 38.22 4.79
3195 4476 2.019897 AACCGAAACCGACACCGACT 62.020 55.000 0.00 0.00 38.22 4.18
3230 4513 9.959749 GAATTTTGGTTGTTTATTGAGTACAGA 57.040 29.630 0.00 0.00 0.00 3.41
3310 4593 1.989165 GCAGCTAATCGATAAGCCGAG 59.011 52.381 0.00 0.00 42.21 4.63
3516 4802 9.587772 CTCAAATCCGGTACTTTATATCCATAG 57.412 37.037 0.00 0.00 0.00 2.23
3527 4813 8.256611 ACTTTATATCCATAGTAAAGCATGCG 57.743 34.615 13.01 0.00 38.41 4.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 9.056005 ACAAGCTGTTTTTCTTTCTTTCTTTTT 57.944 25.926 0.00 0.00 0.00 1.94
9 10 8.607441 ACAAGCTGTTTTTCTTTCTTTCTTTT 57.393 26.923 0.00 0.00 0.00 2.27
10 11 8.607441 AACAAGCTGTTTTTCTTTCTTTCTTT 57.393 26.923 0.00 0.00 37.26 2.52
25 26 2.479560 GCGACCAGAAAAACAAGCTGTT 60.480 45.455 0.00 0.00 43.41 3.16
26 27 1.065551 GCGACCAGAAAAACAAGCTGT 59.934 47.619 0.00 0.00 0.00 4.40
27 28 1.758783 GCGACCAGAAAAACAAGCTG 58.241 50.000 0.00 0.00 0.00 4.24
28 29 0.307760 CGCGACCAGAAAAACAAGCT 59.692 50.000 0.00 0.00 0.00 3.74
29 30 0.028902 ACGCGACCAGAAAAACAAGC 59.971 50.000 15.93 0.00 0.00 4.01
30 31 3.059188 ACATACGCGACCAGAAAAACAAG 60.059 43.478 15.93 0.00 0.00 3.16
31 32 2.873472 ACATACGCGACCAGAAAAACAA 59.127 40.909 15.93 0.00 0.00 2.83
32 33 2.485903 ACATACGCGACCAGAAAAACA 58.514 42.857 15.93 0.00 0.00 2.83
33 34 3.922240 TCTACATACGCGACCAGAAAAAC 59.078 43.478 15.93 0.00 0.00 2.43
34 35 4.177165 TCTACATACGCGACCAGAAAAA 57.823 40.909 15.93 0.00 0.00 1.94
35 36 3.853831 TCTACATACGCGACCAGAAAA 57.146 42.857 15.93 0.00 0.00 2.29
36 37 3.192001 ACTTCTACATACGCGACCAGAAA 59.808 43.478 15.93 0.00 0.00 2.52
37 38 2.751259 ACTTCTACATACGCGACCAGAA 59.249 45.455 15.93 12.48 0.00 3.02
38 39 2.362736 ACTTCTACATACGCGACCAGA 58.637 47.619 15.93 4.77 0.00 3.86
39 40 2.846039 ACTTCTACATACGCGACCAG 57.154 50.000 15.93 1.54 0.00 4.00
40 41 3.009026 TGTACTTCTACATACGCGACCA 58.991 45.455 15.93 0.00 0.00 4.02
41 42 3.680642 TGTACTTCTACATACGCGACC 57.319 47.619 15.93 0.00 0.00 4.79
42 43 7.848716 ATATTTGTACTTCTACATACGCGAC 57.151 36.000 15.93 0.00 32.70 5.19
43 44 8.861033 AAATATTTGTACTTCTACATACGCGA 57.139 30.769 15.93 0.00 32.70 5.87
84 85 4.523083 TGGTCTAGTTTCAAGTTGTGCTT 58.477 39.130 2.11 0.00 38.08 3.91
85 86 4.130118 CTGGTCTAGTTTCAAGTTGTGCT 58.870 43.478 2.11 2.76 0.00 4.40
86 87 4.127171 TCTGGTCTAGTTTCAAGTTGTGC 58.873 43.478 2.11 0.00 0.00 4.57
87 88 5.180117 CCATCTGGTCTAGTTTCAAGTTGTG 59.820 44.000 2.11 0.00 0.00 3.33
88 89 5.071788 TCCATCTGGTCTAGTTTCAAGTTGT 59.928 40.000 2.11 0.00 36.34 3.32
89 90 5.551233 TCCATCTGGTCTAGTTTCAAGTTG 58.449 41.667 0.00 0.00 36.34 3.16
90 91 5.825593 TCCATCTGGTCTAGTTTCAAGTT 57.174 39.130 0.00 0.00 36.34 2.66
91 92 7.345653 TCATATCCATCTGGTCTAGTTTCAAGT 59.654 37.037 0.00 0.00 36.34 3.16
92 93 7.655328 GTCATATCCATCTGGTCTAGTTTCAAG 59.345 40.741 0.00 0.00 36.34 3.02
93 94 7.125659 TGTCATATCCATCTGGTCTAGTTTCAA 59.874 37.037 0.00 0.00 36.34 2.69
94 95 6.611236 TGTCATATCCATCTGGTCTAGTTTCA 59.389 38.462 0.00 0.00 36.34 2.69
95 96 7.055667 TGTCATATCCATCTGGTCTAGTTTC 57.944 40.000 0.00 0.00 36.34 2.78
96 97 7.448420 CATGTCATATCCATCTGGTCTAGTTT 58.552 38.462 0.00 0.00 36.34 2.66
97 98 6.519721 GCATGTCATATCCATCTGGTCTAGTT 60.520 42.308 0.00 0.00 36.34 2.24
98 99 5.046735 GCATGTCATATCCATCTGGTCTAGT 60.047 44.000 0.00 0.00 36.34 2.57
99 100 5.187381 AGCATGTCATATCCATCTGGTCTAG 59.813 44.000 0.00 0.00 36.34 2.43
100 101 5.089434 AGCATGTCATATCCATCTGGTCTA 58.911 41.667 0.00 0.00 36.34 2.59
101 102 3.908733 AGCATGTCATATCCATCTGGTCT 59.091 43.478 0.00 0.00 36.34 3.85
102 103 4.283363 AGCATGTCATATCCATCTGGTC 57.717 45.455 0.00 0.00 36.34 4.02
103 104 4.719026 AAGCATGTCATATCCATCTGGT 57.281 40.909 0.00 0.00 36.34 4.00
104 105 5.314529 AGAAAGCATGTCATATCCATCTGG 58.685 41.667 0.00 0.00 0.00 3.86
105 106 6.485648 TCAAGAAAGCATGTCATATCCATCTG 59.514 38.462 0.00 0.00 0.00 2.90
106 107 6.598503 TCAAGAAAGCATGTCATATCCATCT 58.401 36.000 0.00 0.00 0.00 2.90
107 108 6.872628 TCAAGAAAGCATGTCATATCCATC 57.127 37.500 0.00 0.00 0.00 3.51
108 109 7.504574 TGATTCAAGAAAGCATGTCATATCCAT 59.495 33.333 0.00 0.00 0.00 3.41
109 110 6.829811 TGATTCAAGAAAGCATGTCATATCCA 59.170 34.615 0.00 0.00 0.00 3.41
110 111 7.268199 TGATTCAAGAAAGCATGTCATATCC 57.732 36.000 0.00 0.00 0.00 2.59
111 112 8.618677 TCTTGATTCAAGAAAGCATGTCATATC 58.381 33.333 23.51 0.00 45.84 1.63
112 113 8.515695 TCTTGATTCAAGAAAGCATGTCATAT 57.484 30.769 23.51 0.00 45.84 1.78
113 114 7.926674 TCTTGATTCAAGAAAGCATGTCATA 57.073 32.000 23.51 0.00 45.84 2.15
114 115 6.829229 TCTTGATTCAAGAAAGCATGTCAT 57.171 33.333 23.51 0.00 45.84 3.06
125 126 6.267699 TGAACTCACTACCTCTTGATTCAAGA 59.732 38.462 23.97 23.97 46.50 3.02
126 127 6.459066 TGAACTCACTACCTCTTGATTCAAG 58.541 40.000 18.49 18.49 42.25 3.02
127 128 6.419484 TGAACTCACTACCTCTTGATTCAA 57.581 37.500 0.00 0.00 0.00 2.69
128 129 6.042093 AGTTGAACTCACTACCTCTTGATTCA 59.958 38.462 0.00 0.00 0.00 2.57
129 130 6.459923 AGTTGAACTCACTACCTCTTGATTC 58.540 40.000 0.00 0.00 0.00 2.52
130 131 6.426646 AGTTGAACTCACTACCTCTTGATT 57.573 37.500 0.00 0.00 0.00 2.57
131 132 5.046950 GGAGTTGAACTCACTACCTCTTGAT 60.047 44.000 24.95 0.00 46.79 2.57
132 133 4.281182 GGAGTTGAACTCACTACCTCTTGA 59.719 45.833 24.95 0.00 46.79 3.02
133 134 4.561105 GGAGTTGAACTCACTACCTCTTG 58.439 47.826 24.95 0.00 46.79 3.02
134 135 3.579151 GGGAGTTGAACTCACTACCTCTT 59.421 47.826 24.95 0.00 45.03 2.85
135 136 3.166679 GGGAGTTGAACTCACTACCTCT 58.833 50.000 24.95 0.00 45.03 3.69
136 137 3.596310 GGGAGTTGAACTCACTACCTC 57.404 52.381 24.95 7.23 45.03 3.85
143 144 1.801242 TGAGGTGGGAGTTGAACTCA 58.199 50.000 24.95 5.17 46.79 3.41
144 145 3.369576 GGTATGAGGTGGGAGTTGAACTC 60.370 52.174 16.70 16.70 44.32 3.01
145 146 2.572104 GGTATGAGGTGGGAGTTGAACT 59.428 50.000 0.00 0.00 0.00 3.01
146 147 2.304761 TGGTATGAGGTGGGAGTTGAAC 59.695 50.000 0.00 0.00 0.00 3.18
147 148 2.304761 GTGGTATGAGGTGGGAGTTGAA 59.695 50.000 0.00 0.00 0.00 2.69
148 149 1.906574 GTGGTATGAGGTGGGAGTTGA 59.093 52.381 0.00 0.00 0.00 3.18
149 150 1.909302 AGTGGTATGAGGTGGGAGTTG 59.091 52.381 0.00 0.00 0.00 3.16
150 151 2.344093 AGTGGTATGAGGTGGGAGTT 57.656 50.000 0.00 0.00 0.00 3.01
151 152 2.344093 AAGTGGTATGAGGTGGGAGT 57.656 50.000 0.00 0.00 0.00 3.85
152 153 3.721087 AAAAGTGGTATGAGGTGGGAG 57.279 47.619 0.00 0.00 0.00 4.30
153 154 4.263594 GGTAAAAAGTGGTATGAGGTGGGA 60.264 45.833 0.00 0.00 0.00 4.37
154 155 4.014406 GGTAAAAAGTGGTATGAGGTGGG 58.986 47.826 0.00 0.00 0.00 4.61
155 156 4.658063 TGGTAAAAAGTGGTATGAGGTGG 58.342 43.478 0.00 0.00 0.00 4.61
156 157 5.710099 ACATGGTAAAAAGTGGTATGAGGTG 59.290 40.000 0.00 0.00 0.00 4.00
157 158 5.887754 ACATGGTAAAAAGTGGTATGAGGT 58.112 37.500 0.00 0.00 0.00 3.85
158 159 6.834168 AACATGGTAAAAAGTGGTATGAGG 57.166 37.500 0.00 0.00 0.00 3.86
182 183 7.982761 TTTATTTCCTAGCGTGGTAGAAAAA 57.017 32.000 7.63 7.96 0.00 1.94
183 184 7.982761 TTTTATTTCCTAGCGTGGTAGAAAA 57.017 32.000 7.63 0.43 0.00 2.29
184 185 7.825270 TCATTTTATTTCCTAGCGTGGTAGAAA 59.175 33.333 7.63 6.84 0.00 2.52
185 186 7.332557 TCATTTTATTTCCTAGCGTGGTAGAA 58.667 34.615 7.63 0.00 0.00 2.10
186 187 6.880484 TCATTTTATTTCCTAGCGTGGTAGA 58.120 36.000 7.63 0.00 0.00 2.59
187 188 7.548196 TTCATTTTATTTCCTAGCGTGGTAG 57.452 36.000 0.00 0.00 0.00 3.18
188 189 6.037830 GCTTCATTTTATTTCCTAGCGTGGTA 59.962 38.462 0.00 0.00 0.00 3.25
189 190 5.163652 GCTTCATTTTATTTCCTAGCGTGGT 60.164 40.000 0.00 0.00 0.00 4.16
190 191 5.273944 GCTTCATTTTATTTCCTAGCGTGG 58.726 41.667 0.00 0.00 0.00 4.94
191 192 4.963953 CGCTTCATTTTATTTCCTAGCGTG 59.036 41.667 0.00 0.00 43.56 5.34
192 193 4.035208 CCGCTTCATTTTATTTCCTAGCGT 59.965 41.667 0.00 0.00 46.15 5.07
193 194 4.527564 CCGCTTCATTTTATTTCCTAGCG 58.472 43.478 0.00 0.00 46.86 4.26
194 195 4.578928 TCCCGCTTCATTTTATTTCCTAGC 59.421 41.667 0.00 0.00 0.00 3.42
195 196 6.693315 TTCCCGCTTCATTTTATTTCCTAG 57.307 37.500 0.00 0.00 0.00 3.02
196 197 7.469537 TTTTCCCGCTTCATTTTATTTCCTA 57.530 32.000 0.00 0.00 0.00 2.94
197 198 5.993748 TTTCCCGCTTCATTTTATTTCCT 57.006 34.783 0.00 0.00 0.00 3.36
198 199 5.063438 GCTTTTCCCGCTTCATTTTATTTCC 59.937 40.000 0.00 0.00 0.00 3.13
199 200 5.220209 CGCTTTTCCCGCTTCATTTTATTTC 60.220 40.000 0.00 0.00 0.00 2.17
200 201 4.625311 CGCTTTTCCCGCTTCATTTTATTT 59.375 37.500 0.00 0.00 0.00 1.40
201 202 4.082463 TCGCTTTTCCCGCTTCATTTTATT 60.082 37.500 0.00 0.00 0.00 1.40
202 203 3.442273 TCGCTTTTCCCGCTTCATTTTAT 59.558 39.130 0.00 0.00 0.00 1.40
203 204 2.814919 TCGCTTTTCCCGCTTCATTTTA 59.185 40.909 0.00 0.00 0.00 1.52
204 205 1.611491 TCGCTTTTCCCGCTTCATTTT 59.389 42.857 0.00 0.00 0.00 1.82
205 206 1.243902 TCGCTTTTCCCGCTTCATTT 58.756 45.000 0.00 0.00 0.00 2.32
206 207 1.133025 CATCGCTTTTCCCGCTTCATT 59.867 47.619 0.00 0.00 0.00 2.57
207 208 0.734889 CATCGCTTTTCCCGCTTCAT 59.265 50.000 0.00 0.00 0.00 2.57
208 209 1.305219 CCATCGCTTTTCCCGCTTCA 61.305 55.000 0.00 0.00 0.00 3.02
209 210 1.429423 CCATCGCTTTTCCCGCTTC 59.571 57.895 0.00 0.00 0.00 3.86
210 211 2.046285 CCCATCGCTTTTCCCGCTT 61.046 57.895 0.00 0.00 0.00 4.68
211 212 2.270874 ATCCCATCGCTTTTCCCGCT 62.271 55.000 0.00 0.00 0.00 5.52
212 213 1.823899 ATCCCATCGCTTTTCCCGC 60.824 57.895 0.00 0.00 0.00 6.13
213 214 1.447317 CCATCCCATCGCTTTTCCCG 61.447 60.000 0.00 0.00 0.00 5.14
214 215 1.109323 CCCATCCCATCGCTTTTCCC 61.109 60.000 0.00 0.00 0.00 3.97
215 216 0.106719 TCCCATCCCATCGCTTTTCC 60.107 55.000 0.00 0.00 0.00 3.13
216 217 1.882623 GATCCCATCCCATCGCTTTTC 59.117 52.381 0.00 0.00 0.00 2.29
217 218 1.815408 CGATCCCATCCCATCGCTTTT 60.815 52.381 0.00 0.00 35.84 2.27
218 219 0.250467 CGATCCCATCCCATCGCTTT 60.250 55.000 0.00 0.00 35.84 3.51
219 220 1.121407 TCGATCCCATCCCATCGCTT 61.121 55.000 0.00 0.00 41.41 4.68
220 221 1.533994 TCGATCCCATCCCATCGCT 60.534 57.895 0.00 0.00 41.41 4.93
221 222 1.079543 CTCGATCCCATCCCATCGC 60.080 63.158 0.00 0.00 41.41 4.58
222 223 0.969149 TTCTCGATCCCATCCCATCG 59.031 55.000 0.00 0.00 42.72 3.84
223 224 2.634940 TCTTTCTCGATCCCATCCCATC 59.365 50.000 0.00 0.00 0.00 3.51
224 225 2.694397 TCTTTCTCGATCCCATCCCAT 58.306 47.619 0.00 0.00 0.00 4.00
225 226 2.174685 TCTTTCTCGATCCCATCCCA 57.825 50.000 0.00 0.00 0.00 4.37
226 227 2.224402 CCTTCTTTCTCGATCCCATCCC 60.224 54.545 0.00 0.00 0.00 3.85
227 228 2.700897 TCCTTCTTTCTCGATCCCATCC 59.299 50.000 0.00 0.00 0.00 3.51
228 229 4.202305 ACATCCTTCTTTCTCGATCCCATC 60.202 45.833 0.00 0.00 0.00 3.51
229 230 3.713764 ACATCCTTCTTTCTCGATCCCAT 59.286 43.478 0.00 0.00 0.00 4.00
230 231 3.107601 ACATCCTTCTTTCTCGATCCCA 58.892 45.455 0.00 0.00 0.00 4.37
231 232 3.462021 CACATCCTTCTTTCTCGATCCC 58.538 50.000 0.00 0.00 0.00 3.85
232 233 2.869192 GCACATCCTTCTTTCTCGATCC 59.131 50.000 0.00 0.00 0.00 3.36
233 234 2.537625 CGCACATCCTTCTTTCTCGATC 59.462 50.000 0.00 0.00 0.00 3.69
234 235 2.544685 CGCACATCCTTCTTTCTCGAT 58.455 47.619 0.00 0.00 0.00 3.59
235 236 1.996292 CGCACATCCTTCTTTCTCGA 58.004 50.000 0.00 0.00 0.00 4.04
236 237 0.371645 GCGCACATCCTTCTTTCTCG 59.628 55.000 0.30 0.00 0.00 4.04
237 238 0.729690 GGCGCACATCCTTCTTTCTC 59.270 55.000 10.83 0.00 0.00 2.87
238 239 0.036732 TGGCGCACATCCTTCTTTCT 59.963 50.000 10.83 0.00 0.00 2.52
239 240 0.449388 CTGGCGCACATCCTTCTTTC 59.551 55.000 10.83 0.00 0.00 2.62
240 241 0.962356 CCTGGCGCACATCCTTCTTT 60.962 55.000 10.83 0.00 0.00 2.52
241 242 1.377725 CCTGGCGCACATCCTTCTT 60.378 57.895 10.83 0.00 0.00 2.52
242 243 1.841302 TTCCTGGCGCACATCCTTCT 61.841 55.000 10.83 0.00 0.00 2.85
243 244 0.960364 TTTCCTGGCGCACATCCTTC 60.960 55.000 10.83 0.00 0.00 3.46
244 245 0.539438 TTTTCCTGGCGCACATCCTT 60.539 50.000 10.83 0.00 0.00 3.36
245 246 1.074775 TTTTCCTGGCGCACATCCT 59.925 52.632 10.83 0.00 0.00 3.24
246 247 1.212751 GTTTTCCTGGCGCACATCC 59.787 57.895 10.83 0.00 0.00 3.51
247 248 1.212751 GGTTTTCCTGGCGCACATC 59.787 57.895 10.83 0.00 36.94 3.06
248 249 2.625823 CGGTTTTCCTGGCGCACAT 61.626 57.895 10.83 0.00 37.95 3.21
249 250 3.283684 CGGTTTTCCTGGCGCACA 61.284 61.111 10.83 3.75 37.95 4.57
250 251 4.700365 GCGGTTTTCCTGGCGCAC 62.700 66.667 10.83 0.00 37.95 5.34
252 253 4.700365 GTGCGGTTTTCCTGGCGC 62.700 66.667 0.00 0.00 37.95 6.53
253 254 4.383602 CGTGCGGTTTTCCTGGCG 62.384 66.667 0.00 0.00 37.95 5.69
254 255 4.038080 CCGTGCGGTTTTCCTGGC 62.038 66.667 1.93 0.00 37.95 4.85
255 256 3.361977 CCCGTGCGGTTTTCCTGG 61.362 66.667 9.90 0.00 37.95 4.45
256 257 1.241315 AATCCCGTGCGGTTTTCCTG 61.241 55.000 9.90 0.00 37.95 3.86
257 258 0.538746 AAATCCCGTGCGGTTTTCCT 60.539 50.000 9.90 0.00 37.95 3.36
258 259 0.109458 GAAATCCCGTGCGGTTTTCC 60.109 55.000 17.82 7.14 41.60 3.13
259 260 0.453782 CGAAATCCCGTGCGGTTTTC 60.454 55.000 18.28 18.28 43.02 2.29
260 261 1.577421 CGAAATCCCGTGCGGTTTT 59.423 52.632 9.90 8.82 36.43 2.43
261 262 2.329614 CCGAAATCCCGTGCGGTTT 61.330 57.895 9.90 4.54 38.99 3.27
262 263 2.530958 ATCCGAAATCCCGTGCGGTT 62.531 55.000 9.90 0.00 43.92 4.44
263 264 2.918230 GATCCGAAATCCCGTGCGGT 62.918 60.000 9.90 0.00 43.92 5.68
264 265 2.203015 ATCCGAAATCCCGTGCGG 60.203 61.111 3.25 3.25 44.83 5.69
265 266 1.227263 AGATCCGAAATCCCGTGCG 60.227 57.895 0.00 0.00 0.00 5.34
266 267 0.462047 ACAGATCCGAAATCCCGTGC 60.462 55.000 0.00 0.00 0.00 5.34
267 268 2.024176 AACAGATCCGAAATCCCGTG 57.976 50.000 0.00 0.00 0.00 4.94
268 269 2.781681 AAACAGATCCGAAATCCCGT 57.218 45.000 0.00 0.00 0.00 5.28
269 270 2.544267 GCTAAACAGATCCGAAATCCCG 59.456 50.000 0.00 0.00 0.00 5.14
270 271 3.312697 GTGCTAAACAGATCCGAAATCCC 59.687 47.826 0.00 0.00 0.00 3.85
271 272 3.938963 TGTGCTAAACAGATCCGAAATCC 59.061 43.478 0.00 0.00 33.78 3.01
283 284 4.804868 TTATACCGGACTGTGCTAAACA 57.195 40.909 9.46 0.00 37.22 2.83
284 285 7.958053 ATATTTATACCGGACTGTGCTAAAC 57.042 36.000 9.46 0.00 0.00 2.01
285 286 9.480053 GTAATATTTATACCGGACTGTGCTAAA 57.520 33.333 9.46 1.67 0.00 1.85
286 287 8.090214 GGTAATATTTATACCGGACTGTGCTAA 58.910 37.037 9.46 0.00 0.00 3.09
287 288 7.309990 GGGTAATATTTATACCGGACTGTGCTA 60.310 40.741 9.46 0.00 34.80 3.49
288 289 6.461640 GGTAATATTTATACCGGACTGTGCT 58.538 40.000 9.46 0.00 0.00 4.40
289 290 5.640783 GGGTAATATTTATACCGGACTGTGC 59.359 44.000 9.46 0.00 34.80 4.57
290 291 6.761312 TGGGTAATATTTATACCGGACTGTG 58.239 40.000 9.46 0.00 34.80 3.66
291 292 6.999705 TGGGTAATATTTATACCGGACTGT 57.000 37.500 9.46 0.00 34.80 3.55
292 293 6.652062 GGTTGGGTAATATTTATACCGGACTG 59.348 42.308 9.46 0.00 34.80 3.51
293 294 6.559921 AGGTTGGGTAATATTTATACCGGACT 59.440 38.462 9.46 0.00 34.80 3.85
294 295 6.772605 AGGTTGGGTAATATTTATACCGGAC 58.227 40.000 9.46 0.00 34.80 4.79
295 296 8.503428 TTAGGTTGGGTAATATTTATACCGGA 57.497 34.615 9.46 0.00 34.80 5.14
296 297 9.743581 ATTTAGGTTGGGTAATATTTATACCGG 57.256 33.333 0.00 0.00 34.80 5.28
325 326 9.587772 CAACTGAACTAGCTTAAATTCTAGCTA 57.412 33.333 16.30 16.30 45.46 3.32
327 328 7.334671 ACCAACTGAACTAGCTTAAATTCTAGC 59.665 37.037 0.00 4.10 36.60 3.42
328 329 8.779354 ACCAACTGAACTAGCTTAAATTCTAG 57.221 34.615 0.00 0.00 38.52 2.43
329 330 8.999431 CAACCAACTGAACTAGCTTAAATTCTA 58.001 33.333 0.00 0.00 0.00 2.10
330 331 7.502561 ACAACCAACTGAACTAGCTTAAATTCT 59.497 33.333 0.00 0.00 0.00 2.40
331 332 7.591426 CACAACCAACTGAACTAGCTTAAATTC 59.409 37.037 0.00 0.00 0.00 2.17
332 333 7.284489 TCACAACCAACTGAACTAGCTTAAATT 59.716 33.333 0.00 0.00 0.00 1.82
333 334 6.770785 TCACAACCAACTGAACTAGCTTAAAT 59.229 34.615 0.00 0.00 0.00 1.40
334 335 6.116806 TCACAACCAACTGAACTAGCTTAAA 58.883 36.000 0.00 0.00 0.00 1.52
335 336 5.676552 TCACAACCAACTGAACTAGCTTAA 58.323 37.500 0.00 0.00 0.00 1.85
336 337 5.284861 TCACAACCAACTGAACTAGCTTA 57.715 39.130 0.00 0.00 0.00 3.09
337 338 4.150897 TCACAACCAACTGAACTAGCTT 57.849 40.909 0.00 0.00 0.00 3.74
338 339 3.838244 TCACAACCAACTGAACTAGCT 57.162 42.857 0.00 0.00 0.00 3.32
339 340 3.625764 TGTTCACAACCAACTGAACTAGC 59.374 43.478 10.87 0.00 44.46 3.42
340 341 4.260784 GCTGTTCACAACCAACTGAACTAG 60.261 45.833 10.87 8.13 44.46 2.57
341 342 3.625764 GCTGTTCACAACCAACTGAACTA 59.374 43.478 10.87 0.00 44.46 2.24
342 343 2.423538 GCTGTTCACAACCAACTGAACT 59.576 45.455 10.87 0.00 44.46 3.01
343 344 2.423538 AGCTGTTCACAACCAACTGAAC 59.576 45.455 3.99 3.99 44.42 3.18
344 345 2.722094 AGCTGTTCACAACCAACTGAA 58.278 42.857 0.00 0.00 0.00 3.02
345 346 2.418368 AGCTGTTCACAACCAACTGA 57.582 45.000 0.00 0.00 0.00 3.41
346 347 3.058016 CCATAGCTGTTCACAACCAACTG 60.058 47.826 0.00 0.00 0.00 3.16
347 348 3.149196 CCATAGCTGTTCACAACCAACT 58.851 45.455 0.00 0.00 0.00 3.16
348 349 2.884639 ACCATAGCTGTTCACAACCAAC 59.115 45.455 0.00 0.00 0.00 3.77
349 350 2.884012 CACCATAGCTGTTCACAACCAA 59.116 45.455 0.00 0.00 0.00 3.67
350 351 2.105649 TCACCATAGCTGTTCACAACCA 59.894 45.455 0.00 0.00 0.00 3.67
351 352 2.778299 TCACCATAGCTGTTCACAACC 58.222 47.619 0.00 0.00 0.00 3.77
352 353 3.058224 GGTTCACCATAGCTGTTCACAAC 60.058 47.826 0.00 0.00 35.64 3.32
353 354 3.146066 GGTTCACCATAGCTGTTCACAA 58.854 45.455 0.00 0.00 35.64 3.33
354 355 2.778299 GGTTCACCATAGCTGTTCACA 58.222 47.619 0.00 0.00 35.64 3.58
355 356 1.732259 CGGTTCACCATAGCTGTTCAC 59.268 52.381 0.00 0.00 35.14 3.18
356 357 1.346395 ACGGTTCACCATAGCTGTTCA 59.654 47.619 0.00 0.00 35.14 3.18
357 358 2.094762 ACGGTTCACCATAGCTGTTC 57.905 50.000 0.00 0.00 35.14 3.18
358 359 2.093658 CCTACGGTTCACCATAGCTGTT 60.094 50.000 0.00 0.00 30.84 3.16
359 360 1.480954 CCTACGGTTCACCATAGCTGT 59.519 52.381 0.00 0.00 30.84 4.40
360 361 1.480954 ACCTACGGTTCACCATAGCTG 59.519 52.381 0.00 0.00 30.84 4.24
361 362 1.861982 ACCTACGGTTCACCATAGCT 58.138 50.000 0.00 0.00 30.84 3.32
362 363 2.692041 ACTACCTACGGTTCACCATAGC 59.308 50.000 0.00 0.00 37.09 2.97
363 364 3.067742 CCACTACCTACGGTTCACCATAG 59.932 52.174 0.00 0.00 37.09 2.23
364 365 3.025978 CCACTACCTACGGTTCACCATA 58.974 50.000 0.00 0.00 37.09 2.74
365 366 1.829222 CCACTACCTACGGTTCACCAT 59.171 52.381 0.00 0.00 37.09 3.55
366 367 1.259609 CCACTACCTACGGTTCACCA 58.740 55.000 0.00 0.00 37.09 4.17
367 368 0.533951 CCCACTACCTACGGTTCACC 59.466 60.000 0.00 0.00 37.09 4.02
368 369 1.260544 ACCCACTACCTACGGTTCAC 58.739 55.000 0.00 0.00 37.09 3.18
369 370 2.014010 AACCCACTACCTACGGTTCA 57.986 50.000 0.00 0.00 37.09 3.18
370 371 2.299867 TCAAACCCACTACCTACGGTTC 59.700 50.000 0.00 0.00 37.62 3.62
371 372 2.301009 CTCAAACCCACTACCTACGGTT 59.699 50.000 0.00 0.00 40.32 4.44
372 373 1.897802 CTCAAACCCACTACCTACGGT 59.102 52.381 0.00 0.00 40.16 4.83
373 374 1.897802 ACTCAAACCCACTACCTACGG 59.102 52.381 0.00 0.00 0.00 4.02
374 375 2.094338 GGACTCAAACCCACTACCTACG 60.094 54.545 0.00 0.00 0.00 3.51
375 376 2.235650 GGGACTCAAACCCACTACCTAC 59.764 54.545 0.00 0.00 46.05 3.18
376 377 2.543635 GGGACTCAAACCCACTACCTA 58.456 52.381 0.00 0.00 46.05 3.08
377 378 1.359168 GGGACTCAAACCCACTACCT 58.641 55.000 0.00 0.00 46.05 3.08
378 379 3.950869 GGGACTCAAACCCACTACC 57.049 57.895 0.00 0.00 46.05 3.18
385 386 2.067365 ACAAAGTGGGGACTCAAACC 57.933 50.000 0.00 0.00 0.00 3.27
386 387 3.314357 GTGTACAAAGTGGGGACTCAAAC 59.686 47.826 0.00 0.00 0.00 2.93
387 388 3.201266 AGTGTACAAAGTGGGGACTCAAA 59.799 43.478 0.00 0.00 0.00 2.69
388 389 2.775384 AGTGTACAAAGTGGGGACTCAA 59.225 45.455 0.00 0.00 0.00 3.02
389 390 2.404559 AGTGTACAAAGTGGGGACTCA 58.595 47.619 0.00 0.00 0.00 3.41
390 391 3.487120 AAGTGTACAAAGTGGGGACTC 57.513 47.619 0.00 0.00 0.00 3.36
391 392 3.945640 AAAGTGTACAAAGTGGGGACT 57.054 42.857 0.00 0.00 0.00 3.85
392 393 4.994907 AAAAAGTGTACAAAGTGGGGAC 57.005 40.909 0.00 0.00 0.00 4.46
429 430 1.463375 CCTCCCTTCCCCCGTTTTT 59.537 57.895 0.00 0.00 0.00 1.94
430 431 2.544745 CCCTCCCTTCCCCCGTTTT 61.545 63.158 0.00 0.00 0.00 2.43
431 432 2.939353 CCCTCCCTTCCCCCGTTT 60.939 66.667 0.00 0.00 0.00 3.60
434 435 4.752594 TTCCCCTCCCTTCCCCCG 62.753 72.222 0.00 0.00 0.00 5.73
435 436 3.021880 GTTCCCCTCCCTTCCCCC 61.022 72.222 0.00 0.00 0.00 5.40
436 437 3.408853 CGTTCCCCTCCCTTCCCC 61.409 72.222 0.00 0.00 0.00 4.81
437 438 1.911702 CTTCGTTCCCCTCCCTTCCC 61.912 65.000 0.00 0.00 0.00 3.97
438 439 1.602771 CTTCGTTCCCCTCCCTTCC 59.397 63.158 0.00 0.00 0.00 3.46
439 440 1.078356 GCTTCGTTCCCCTCCCTTC 60.078 63.158 0.00 0.00 0.00 3.46
440 441 2.955881 CGCTTCGTTCCCCTCCCTT 61.956 63.158 0.00 0.00 0.00 3.95
441 442 3.391382 CGCTTCGTTCCCCTCCCT 61.391 66.667 0.00 0.00 0.00 4.20
442 443 4.468689 CCGCTTCGTTCCCCTCCC 62.469 72.222 0.00 0.00 0.00 4.30
443 444 4.468689 CCCGCTTCGTTCCCCTCC 62.469 72.222 0.00 0.00 0.00 4.30
444 445 4.468689 CCCCGCTTCGTTCCCCTC 62.469 72.222 0.00 0.00 0.00 4.30
446 447 4.468689 CTCCCCGCTTCGTTCCCC 62.469 72.222 0.00 0.00 0.00 4.81
459 460 3.507597 GATCGCTTCTCCCGCTCCC 62.508 68.421 0.00 0.00 0.00 4.30
460 461 2.028337 GATCGCTTCTCCCGCTCC 59.972 66.667 0.00 0.00 0.00 4.70
461 462 2.354072 CGATCGCTTCTCCCGCTC 60.354 66.667 0.26 0.00 0.00 5.03
462 463 3.141488 ACGATCGCTTCTCCCGCT 61.141 61.111 16.60 0.00 0.00 5.52
463 464 2.956964 CACGATCGCTTCTCCCGC 60.957 66.667 16.60 0.00 0.00 6.13
464 465 2.956964 GCACGATCGCTTCTCCCG 60.957 66.667 16.60 0.00 0.00 5.14
465 466 2.956964 CGCACGATCGCTTCTCCC 60.957 66.667 16.60 0.00 0.00 4.30
466 467 2.685387 ATCCGCACGATCGCTTCTCC 62.685 60.000 16.60 0.00 0.00 3.71
467 468 1.272114 GATCCGCACGATCGCTTCTC 61.272 60.000 16.60 1.14 38.23 2.87
468 469 1.299468 GATCCGCACGATCGCTTCT 60.299 57.895 16.60 0.00 38.23 2.85
469 470 3.225758 GATCCGCACGATCGCTTC 58.774 61.111 16.60 3.30 38.23 3.86
474 475 3.909312 CGACAGATCCGCACGATC 58.091 61.111 3.12 3.12 46.86 3.69
481 482 1.860950 CAATGGTTAGCGACAGATCCG 59.139 52.381 0.00 0.00 0.00 4.18
482 483 2.906354 ACAATGGTTAGCGACAGATCC 58.094 47.619 0.00 0.00 0.00 3.36
483 484 4.946784 AAACAATGGTTAGCGACAGATC 57.053 40.909 0.00 0.00 35.82 2.75
484 485 5.705609 AAAAACAATGGTTAGCGACAGAT 57.294 34.783 0.00 0.00 35.82 2.90
485 486 6.811253 ATAAAAACAATGGTTAGCGACAGA 57.189 33.333 0.00 0.00 35.82 3.41
509 510 9.672673 AATGCTACTCTAACAAACTGTTCATAT 57.327 29.630 0.00 0.00 40.22 1.78
510 511 9.502091 AAATGCTACTCTAACAAACTGTTCATA 57.498 29.630 0.00 0.00 40.22 2.15
511 512 7.986085 AATGCTACTCTAACAAACTGTTCAT 57.014 32.000 0.00 0.00 40.22 2.57
512 513 7.801716 AAATGCTACTCTAACAAACTGTTCA 57.198 32.000 0.00 0.00 40.22 3.18
537 538 9.816787 ACCTAACTTTTGAATTATCTGGGTAAA 57.183 29.630 0.00 0.00 0.00 2.01
540 541 9.990868 AATACCTAACTTTTGAATTATCTGGGT 57.009 29.630 0.00 0.00 0.00 4.51
550 551 9.733219 CAACCGTAAAAATACCTAACTTTTGAA 57.267 29.630 0.00 0.00 0.00 2.69
551 552 8.351461 CCAACCGTAAAAATACCTAACTTTTGA 58.649 33.333 0.00 0.00 0.00 2.69
552 553 8.351461 TCCAACCGTAAAAATACCTAACTTTTG 58.649 33.333 0.00 0.00 0.00 2.44
553 554 8.352201 GTCCAACCGTAAAAATACCTAACTTTT 58.648 33.333 0.00 0.00 0.00 2.27
554 555 7.720957 AGTCCAACCGTAAAAATACCTAACTTT 59.279 33.333 0.00 0.00 0.00 2.66
555 556 7.226441 AGTCCAACCGTAAAAATACCTAACTT 58.774 34.615 0.00 0.00 0.00 2.66
556 557 6.772605 AGTCCAACCGTAAAAATACCTAACT 58.227 36.000 0.00 0.00 0.00 2.24
557 558 8.722480 ATAGTCCAACCGTAAAAATACCTAAC 57.278 34.615 0.00 0.00 0.00 2.34
558 559 8.761689 AGATAGTCCAACCGTAAAAATACCTAA 58.238 33.333 0.00 0.00 0.00 2.69
559 560 8.310122 AGATAGTCCAACCGTAAAAATACCTA 57.690 34.615 0.00 0.00 0.00 3.08
560 561 7.191593 AGATAGTCCAACCGTAAAAATACCT 57.808 36.000 0.00 0.00 0.00 3.08
561 562 9.551734 AATAGATAGTCCAACCGTAAAAATACC 57.448 33.333 0.00 0.00 0.00 2.73
564 565 9.675464 TTCAATAGATAGTCCAACCGTAAAAAT 57.325 29.630 0.00 0.00 0.00 1.82
565 566 9.158233 CTTCAATAGATAGTCCAACCGTAAAAA 57.842 33.333 0.00 0.00 0.00 1.94
566 567 8.533657 TCTTCAATAGATAGTCCAACCGTAAAA 58.466 33.333 0.00 0.00 0.00 1.52
567 568 8.070034 TCTTCAATAGATAGTCCAACCGTAAA 57.930 34.615 0.00 0.00 0.00 2.01
568 569 7.649533 TCTTCAATAGATAGTCCAACCGTAA 57.350 36.000 0.00 0.00 0.00 3.18
569 570 7.658261 CATCTTCAATAGATAGTCCAACCGTA 58.342 38.462 0.00 0.00 41.78 4.02
570 571 6.516718 CATCTTCAATAGATAGTCCAACCGT 58.483 40.000 0.00 0.00 41.78 4.83
571 572 5.406780 GCATCTTCAATAGATAGTCCAACCG 59.593 44.000 0.00 0.00 41.78 4.44
572 573 6.529220 AGCATCTTCAATAGATAGTCCAACC 58.471 40.000 0.00 0.00 41.78 3.77
573 574 7.650834 GAGCATCTTCAATAGATAGTCCAAC 57.349 40.000 0.00 0.00 41.78 3.77
589 590 8.209584 ACATCTTCATGTATGTTAGAGCATCTT 58.790 33.333 0.00 0.00 42.13 2.40
590 591 7.656542 CACATCTTCATGTATGTTAGAGCATCT 59.343 37.037 7.91 0.00 45.30 2.90
591 592 7.095313 CCACATCTTCATGTATGTTAGAGCATC 60.095 40.741 7.91 0.00 41.69 3.91
592 593 6.709397 CCACATCTTCATGTATGTTAGAGCAT 59.291 38.462 7.91 0.00 41.69 3.79
593 594 6.051074 CCACATCTTCATGTATGTTAGAGCA 58.949 40.000 7.91 0.00 41.69 4.26
594 595 6.018425 CACCACATCTTCATGTATGTTAGAGC 60.018 42.308 7.91 0.00 41.69 4.09
595 596 7.044181 ACACCACATCTTCATGTATGTTAGAG 58.956 38.462 7.91 5.47 41.69 2.43
600 601 5.415701 GGAAACACCACATCTTCATGTATGT 59.584 40.000 0.00 0.00 41.69 2.29
642 643 4.599041 TCAAACGGGATGGAGATGATTTT 58.401 39.130 0.00 0.00 0.00 1.82
654 655 3.091545 AGCAACATCAATCAAACGGGAT 58.908 40.909 0.00 0.00 0.00 3.85
730 780 8.134895 GTGGTGTTTCAATTTAAATCTGACTCA 58.865 33.333 0.10 6.79 0.00 3.41
750 801 2.480610 CGCTTGTGCCTTGTGGTGT 61.481 57.895 0.00 0.00 35.36 4.16
752 803 2.906897 CCGCTTGTGCCTTGTGGT 60.907 61.111 0.00 0.00 35.36 4.16
753 804 4.347453 GCCGCTTGTGCCTTGTGG 62.347 66.667 0.00 0.00 35.36 4.17
754 805 3.259425 GAGCCGCTTGTGCCTTGTG 62.259 63.158 0.00 0.00 35.36 3.33
755 806 2.980233 GAGCCGCTTGTGCCTTGT 60.980 61.111 0.00 0.00 35.36 3.16
756 807 3.741476 GGAGCCGCTTGTGCCTTG 61.741 66.667 0.00 0.00 35.36 3.61
895 954 0.613777 AAGGTAAAGGAGCCTGTCGG 59.386 55.000 0.00 0.00 34.90 4.79
896 955 1.726853 CAAGGTAAAGGAGCCTGTCG 58.273 55.000 0.00 0.00 34.90 4.35
898 957 0.038310 GGCAAGGTAAAGGAGCCTGT 59.962 55.000 0.00 0.00 42.01 4.00
899 958 0.038166 TGGCAAGGTAAAGGAGCCTG 59.962 55.000 0.00 0.00 45.42 4.85
900 959 0.038310 GTGGCAAGGTAAAGGAGCCT 59.962 55.000 0.00 0.00 45.42 4.58
901 960 1.305930 CGTGGCAAGGTAAAGGAGCC 61.306 60.000 0.00 0.00 45.41 4.70
907 979 3.701532 CTTGTTTCGTGGCAAGGTAAA 57.298 42.857 0.00 0.00 38.61 2.01
967 1051 4.082354 CAGCAGCTAATTTCTTCAGCCTTT 60.082 41.667 0.00 0.00 35.88 3.11
968 1052 3.442977 CAGCAGCTAATTTCTTCAGCCTT 59.557 43.478 0.00 0.00 35.88 4.35
969 1053 3.015327 CAGCAGCTAATTTCTTCAGCCT 58.985 45.455 0.00 0.00 35.88 4.58
970 1054 2.479219 GCAGCAGCTAATTTCTTCAGCC 60.479 50.000 0.00 0.00 35.88 4.85
972 1056 2.417933 ACGCAGCAGCTAATTTCTTCAG 59.582 45.455 0.00 0.00 39.10 3.02
973 1057 2.160219 CACGCAGCAGCTAATTTCTTCA 59.840 45.455 0.00 0.00 39.10 3.02
975 1059 1.135575 GCACGCAGCAGCTAATTTCTT 60.136 47.619 0.00 0.00 44.79 2.52
976 1060 0.449388 GCACGCAGCAGCTAATTTCT 59.551 50.000 0.00 0.00 44.79 2.52
977 1061 0.858961 CGCACGCAGCAGCTAATTTC 60.859 55.000 0.00 0.00 46.13 2.17
978 1062 1.135315 CGCACGCAGCAGCTAATTT 59.865 52.632 0.00 0.00 46.13 1.82
1173 1257 2.458006 CTTTGGCTTTCGCGGTGTCC 62.458 60.000 6.13 3.71 36.88 4.02
1187 1271 1.172175 GGCTTCTTCTGCCTCTTTGG 58.828 55.000 0.00 0.00 46.38 3.28
1240 1324 2.659016 GGCTTCCTTTGCCTTGGC 59.341 61.111 4.43 4.43 46.38 4.52
1248 1332 3.934391 CTCGTCCGCGGCTTCCTTT 62.934 63.158 23.51 0.00 38.89 3.11
1274 1358 0.955919 CGTTTCCTTGTCCTCCAGCC 60.956 60.000 0.00 0.00 0.00 4.85
1290 1374 4.988598 CACTGCGCCCACTCCGTT 62.989 66.667 4.18 0.00 0.00 4.44
1329 1413 2.033194 CCAGAAACGGCGGAACCTC 61.033 63.158 13.24 0.00 35.61 3.85
1331 1415 1.598685 TTCCAGAAACGGCGGAACC 60.599 57.895 13.24 0.00 33.88 3.62
1378 1462 2.863809 ACTGGTTTGATGGAAGGTGAC 58.136 47.619 0.00 0.00 0.00 3.67
1409 1493 2.691984 ACCGCGGAACACAAATAAAC 57.308 45.000 35.90 0.00 0.00 2.01
1426 1514 7.258441 ACTTGCTTTAAGAAACTGAAAGAACC 58.742 34.615 11.46 0.00 39.76 3.62
1553 1800 3.004106 GGATAGATGCTGCATTGTTCCAC 59.996 47.826 17.36 1.77 0.00 4.02
1557 1804 3.220110 CAGGGATAGATGCTGCATTGTT 58.780 45.455 17.36 8.34 0.00 2.83
1604 1851 4.492160 GCATCGGGCGAGTCACGA 62.492 66.667 4.38 4.38 45.77 4.35
1611 1858 2.213513 TATCCATGGCATCGGGCGA 61.214 57.895 6.96 0.00 46.16 5.54
1620 1867 4.672587 TGAACTGTAGAGTATCCATGGC 57.327 45.455 6.96 0.00 33.66 4.40
1627 1874 7.526142 TTGACTGACTTGAACTGTAGAGTAT 57.474 36.000 0.00 0.00 0.00 2.12
1656 1903 5.091431 GTGTAAGCACTCTTTGATTGATGC 58.909 41.667 0.00 0.00 42.13 3.91
1685 1932 1.005294 CGATGCCAAACACTTGCAGC 61.005 55.000 0.00 0.00 0.00 5.25
1700 1947 0.998669 TATCACGTGCAGCAACGATG 59.001 50.000 19.83 14.59 46.49 3.84
1781 2028 9.021863 GTGAGTAAGAATATACAAACCTCTTCG 57.978 37.037 0.00 0.00 0.00 3.79
1807 2054 3.999663 TGCAACTTGGGAAAACAAACAAG 59.000 39.130 0.00 0.00 44.32 3.16
1959 2206 5.242393 ACTGCATCAAAGTGGATATAATGCC 59.758 40.000 0.00 0.00 37.75 4.40
2132 2383 7.226325 CAGATCTTTATCCTCAGCTTTTGTAGG 59.774 40.741 0.00 0.00 31.98 3.18
2181 2432 2.747446 CCAGTTAGGCAATACGCACTTT 59.253 45.455 0.00 0.00 45.17 2.66
2187 2438 4.093850 GGTAAACACCAGTTAGGCAATACG 59.906 45.833 0.00 0.00 43.14 3.06
2338 2589 6.358974 TTGACAAGGACATCATCAGTAGAA 57.641 37.500 0.00 0.00 0.00 2.10
2446 2700 5.126779 AGACAAACCTTCAGAAACTTCTCC 58.873 41.667 0.00 0.00 34.74 3.71
2466 2720 6.728200 TCATTAATCGAAATTGCCATGAGAC 58.272 36.000 0.00 0.00 0.00 3.36
2641 2895 2.095718 GCGGTTTCAAATGGTGTCTCTC 60.096 50.000 0.00 0.00 0.00 3.20
2642 2896 1.880027 GCGGTTTCAAATGGTGTCTCT 59.120 47.619 0.00 0.00 0.00 3.10
2673 2927 8.734218 TGCCCGTAAGTGTATCATTTTTATAA 57.266 30.769 0.00 0.00 0.00 0.98
2736 2990 1.736032 GCTCACACCGCTATCTCGTTT 60.736 52.381 0.00 0.00 0.00 3.60
2739 2993 1.299468 GGCTCACACCGCTATCTCG 60.299 63.158 0.00 0.00 0.00 4.04
2836 3090 6.600822 GCCAATGATGCTATACACTTATGGAT 59.399 38.462 0.00 0.00 32.48 3.41
2949 3203 9.647918 ACCACTGATTAATCTGATTAGAGACTA 57.352 33.333 24.26 0.00 36.14 2.59
2973 3227 3.056322 ACCCAGAATTACACGTGTCTACC 60.056 47.826 27.16 13.23 0.00 3.18
2999 3253 1.525442 CGGGAATGGTACCTGTCCC 59.475 63.158 30.08 30.08 45.50 4.46
3002 3256 2.288025 ACGCGGGAATGGTACCTGT 61.288 57.895 14.36 0.00 36.29 4.00
3018 3272 0.462047 CCCCTTTAGCTACAGGCACG 60.462 60.000 18.98 7.00 44.79 5.34
3098 3352 1.545706 GGAGCGTTGGAGGAGACCTT 61.546 60.000 0.00 0.00 31.76 3.50
3140 4421 1.341187 CGGTTTTTATGCCCACCCCTA 60.341 52.381 0.00 0.00 0.00 3.53
3162 4443 5.409211 GGTTTCGGTTTAGTTTTTGGTTGA 58.591 37.500 0.00 0.00 0.00 3.18
3202 4485 9.522804 TGTACTCAATAAACAACCAAAATTCAC 57.477 29.630 0.00 0.00 0.00 3.18
3203 4486 9.743057 CTGTACTCAATAAACAACCAAAATTCA 57.257 29.630 0.00 0.00 0.00 2.57
3204 4487 9.959749 TCTGTACTCAATAAACAACCAAAATTC 57.040 29.630 0.00 0.00 0.00 2.17
3249 4532 9.332301 GTCCGAATTTTGTTCGATTAATAACAA 57.668 29.630 10.98 10.98 43.97 2.83
3310 4593 7.940850 AGGCAACATATATTGGTTGTATGAAC 58.059 34.615 14.19 0.00 44.70 3.18
3452 4738 2.179018 CAATTCGTGCCTTGCCCG 59.821 61.111 0.00 0.00 0.00 6.13
3516 4802 2.806288 ATTCACGTCGCATGCTTTAC 57.194 45.000 17.13 10.13 0.00 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.