Multiple sequence alignment - TraesCS7B01G088600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G088600 chr7B 100.000 2569 0 0 1 2569 103740147 103737579 0.000000e+00 4745
1 TraesCS7B01G088600 chr7B 91.349 1653 83 24 618 2232 103884324 103882694 0.000000e+00 2206
2 TraesCS7B01G088600 chr7B 78.609 575 101 16 1 561 103885008 103884442 6.760000e-96 361
3 TraesCS7B01G088600 chr7D 89.510 1001 73 24 608 1589 138350283 138349296 0.000000e+00 1238
4 TraesCS7B01G088600 chr7D 88.557 970 83 18 618 1573 138380112 138379157 0.000000e+00 1151
5 TraesCS7B01G088600 chr7D 81.558 629 68 26 1638 2232 138379045 138378431 2.310000e-130 475
6 TraesCS7B01G088600 chr7D 85.249 461 54 11 1781 2232 138349058 138348603 1.800000e-126 462
7 TraesCS7B01G088600 chr7D 83.763 388 55 6 1 384 138408670 138408287 6.760000e-96 361
8 TraesCS7B01G088600 chr7D 80.040 496 83 15 1 488 167079488 167079001 1.130000e-93 353
9 TraesCS7B01G088600 chr7D 79.873 472 70 15 2 463 567714865 567715321 3.190000e-84 322
10 TraesCS7B01G088600 chr7D 79.899 199 31 8 1871 2065 613446648 613446455 1.240000e-28 137
11 TraesCS7B01G088600 chr7A 88.383 835 54 12 783 1574 138382652 138381818 0.000000e+00 965
12 TraesCS7B01G088600 chr7A 86.918 558 46 10 618 1159 138383306 138382760 3.660000e-168 601
13 TraesCS7B01G088600 chr7A 86.534 401 41 11 1780 2174 138381594 138381201 1.830000e-116 429
14 TraesCS7B01G088600 chr2D 83.879 397 56 8 1 392 367805747 367805354 3.120000e-99 372
15 TraesCS7B01G088600 chr6B 80.444 496 86 8 1 489 449046487 449045996 4.040000e-98 368
16 TraesCS7B01G088600 chr4A 80.488 492 86 8 3 489 548299786 548299300 4.040000e-98 368
17 TraesCS7B01G088600 chr4A 79.508 244 42 8 1297 1537 100551152 100550914 1.580000e-37 167
18 TraesCS7B01G088600 chr3A 79.032 558 97 16 1 546 684310668 684311217 5.220000e-97 364
19 TraesCS7B01G088600 chr2A 77.879 547 104 14 3 538 769064138 769063598 8.870000e-85 324
20 TraesCS7B01G088600 chr4D 76.800 250 50 8 1291 1537 365188131 365188375 1.600000e-27 134
21 TraesCS7B01G088600 chrUn 80.952 168 30 2 1300 1466 38635199 38635033 5.770000e-27 132
22 TraesCS7B01G088600 chrUn 80.117 171 32 2 1297 1466 263451670 263451839 2.680000e-25 126
23 TraesCS7B01G088600 chr3D 79.641 167 34 0 1300 1466 17413720 17413554 1.250000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G088600 chr7B 103737579 103740147 2568 True 4745.0 4745 100.000000 1 2569 1 chr7B.!!$R1 2568
1 TraesCS7B01G088600 chr7B 103882694 103885008 2314 True 1283.5 2206 84.979000 1 2232 2 chr7B.!!$R2 2231
2 TraesCS7B01G088600 chr7D 138348603 138350283 1680 True 850.0 1238 87.379500 608 2232 2 chr7D.!!$R4 1624
3 TraesCS7B01G088600 chr7D 138378431 138380112 1681 True 813.0 1151 85.057500 618 2232 2 chr7D.!!$R5 1614
4 TraesCS7B01G088600 chr7A 138381201 138383306 2105 True 665.0 965 87.278333 618 2174 3 chr7A.!!$R1 1556
5 TraesCS7B01G088600 chr3A 684310668 684311217 549 False 364.0 364 79.032000 1 546 1 chr3A.!!$F1 545
6 TraesCS7B01G088600 chr2A 769063598 769064138 540 True 324.0 324 77.879000 3 538 1 chr2A.!!$R1 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
861 1438 0.109781 AAACGTGTCAATGCGATGCC 60.11 50.0 0.0 0.0 0.0 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2210 2974 0.107654 AGTACTCGGCCTGGCAATTC 60.108 55.0 22.05 1.35 0.0 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 66 1.442769 TGAGAACATGCTCTTTCGCC 58.557 50.000 0.00 0.00 35.91 5.54
71 74 4.129737 CTCTTTCGCCCGCTCCGA 62.130 66.667 0.00 0.00 0.00 4.55
116 122 1.529214 CGTCGTCTCATCCGTGTAGTG 60.529 57.143 0.00 0.00 0.00 2.74
117 123 1.736126 GTCGTCTCATCCGTGTAGTGA 59.264 52.381 0.00 0.00 0.00 3.41
118 124 2.355132 GTCGTCTCATCCGTGTAGTGAT 59.645 50.000 0.00 0.00 0.00 3.06
119 125 3.014623 TCGTCTCATCCGTGTAGTGATT 58.985 45.455 0.00 0.00 0.00 2.57
124 130 4.098044 TCTCATCCGTGTAGTGATTTCCTC 59.902 45.833 0.00 0.00 0.00 3.71
157 163 2.034179 CGGCGGATGACTCAACATAGTA 59.966 50.000 0.00 0.00 0.00 1.82
195 201 1.386533 AGCCGAATCCATTGCTTCAG 58.613 50.000 0.00 0.00 0.00 3.02
234 243 1.620822 AGCCTGGACATTTCACCAAC 58.379 50.000 0.00 0.00 35.67 3.77
241 251 2.362077 GGACATTTCACCAACAGTTGCT 59.638 45.455 7.88 0.00 0.00 3.91
265 275 2.623889 GCATGGTGAGTATCGTAGGAGT 59.376 50.000 0.00 0.00 38.61 3.85
270 280 5.687780 TGGTGAGTATCGTAGGAGTTGATA 58.312 41.667 0.00 0.00 38.61 2.15
279 289 3.630769 CGTAGGAGTTGATAGTACCTGCA 59.369 47.826 0.00 0.00 34.05 4.41
284 294 0.899019 TTGATAGTACCTGCACGGCA 59.101 50.000 2.50 0.00 36.92 5.69
301 312 1.166129 GCAGTCGTAGAGAGGTGTGA 58.834 55.000 0.00 0.00 36.95 3.58
307 318 1.268899 CGTAGAGAGGTGTGAAACGGT 59.731 52.381 0.00 0.00 42.39 4.83
315 326 2.029964 GTGAAACGGTGGCGGAGA 59.970 61.111 0.00 0.00 0.00 3.71
328 339 1.079819 CGGAGAAGAAGCGGCTTGA 60.080 57.895 21.70 0.00 0.00 3.02
340 351 2.747855 GCTTGAAGCCCGGGAGTG 60.748 66.667 29.31 8.37 34.48 3.51
342 353 3.249189 TTGAAGCCCGGGAGTGCT 61.249 61.111 29.31 11.66 40.17 4.40
370 381 1.614413 GTGACGGACTCCTCAAGTTCT 59.386 52.381 0.00 0.00 38.74 3.01
371 382 2.818432 GTGACGGACTCCTCAAGTTCTA 59.182 50.000 0.00 0.00 38.74 2.10
375 386 4.009002 ACGGACTCCTCAAGTTCTAGTAC 58.991 47.826 0.00 0.00 38.74 2.73
426 437 2.095252 GGCGACGAAGGCAAGAGAC 61.095 63.158 0.00 0.00 36.61 3.36
441 452 4.794329 GCAAGAGACAAAAAGGAAAGGAGC 60.794 45.833 0.00 0.00 0.00 4.70
450 461 6.264518 ACAAAAAGGAAAGGAGCGAAAATAGA 59.735 34.615 0.00 0.00 0.00 1.98
464 475 1.131638 AATAGAAGGATGGAGGCGCA 58.868 50.000 10.83 0.00 0.00 6.09
474 486 2.347490 GAGGCGCAGGTCTGGAAA 59.653 61.111 10.83 0.00 0.00 3.13
475 487 1.302511 GAGGCGCAGGTCTGGAAAA 60.303 57.895 10.83 0.00 0.00 2.29
486 498 2.764010 GGTCTGGAAAAGGTTTTGGTGT 59.236 45.455 0.00 0.00 0.00 4.16
499 511 2.461300 TTGGTGTGGTTTTGGATGGA 57.539 45.000 0.00 0.00 0.00 3.41
501 513 1.063642 TGGTGTGGTTTTGGATGGACA 60.064 47.619 0.00 0.00 0.00 4.02
506 520 2.066592 TGGTTTTGGATGGACAGGGTA 58.933 47.619 0.00 0.00 0.00 3.69
510 524 4.340617 GTTTTGGATGGACAGGGTATCAA 58.659 43.478 0.00 0.00 0.00 2.57
521 535 4.603131 ACAGGGTATCAAAGTCCTACGTA 58.397 43.478 0.00 0.00 0.00 3.57
525 539 6.040616 CAGGGTATCAAAGTCCTACGTATCTT 59.959 42.308 0.00 0.00 0.00 2.40
526 540 6.610425 AGGGTATCAAAGTCCTACGTATCTTT 59.390 38.462 0.00 5.36 0.00 2.52
538 552 2.094338 ACGTATCTTTTGTCCGGACTCC 60.094 50.000 33.39 10.02 0.00 3.85
548 562 0.252103 TCCGGACTCCTACAAAGCCT 60.252 55.000 0.00 0.00 0.00 4.58
550 564 1.003233 CCGGACTCCTACAAAGCCTTT 59.997 52.381 0.00 0.00 0.00 3.11
551 565 2.552373 CCGGACTCCTACAAAGCCTTTT 60.552 50.000 0.00 0.00 0.00 2.27
553 567 4.320870 CGGACTCCTACAAAGCCTTTTAA 58.679 43.478 0.00 0.00 0.00 1.52
556 570 6.072119 CGGACTCCTACAAAGCCTTTTAATTT 60.072 38.462 0.00 0.00 0.00 1.82
557 571 7.090808 GGACTCCTACAAAGCCTTTTAATTTG 58.909 38.462 0.00 0.00 39.32 2.32
558 572 7.255836 GGACTCCTACAAAGCCTTTTAATTTGT 60.256 37.037 8.67 8.67 46.06 2.83
559 573 7.658261 ACTCCTACAAAGCCTTTTAATTTGTC 58.342 34.615 7.26 0.00 43.92 3.18
560 574 7.505923 ACTCCTACAAAGCCTTTTAATTTGTCT 59.494 33.333 7.26 0.00 43.92 3.41
561 575 8.927675 TCCTACAAAGCCTTTTAATTTGTCTA 57.072 30.769 7.26 0.00 43.92 2.59
562 576 9.528489 TCCTACAAAGCCTTTTAATTTGTCTAT 57.472 29.630 7.26 0.00 43.92 1.98
563 577 9.573133 CCTACAAAGCCTTTTAATTTGTCTATG 57.427 33.333 7.26 0.02 43.92 2.23
564 578 7.889589 ACAAAGCCTTTTAATTTGTCTATGC 57.110 32.000 0.00 0.00 41.96 3.14
566 580 8.150296 ACAAAGCCTTTTAATTTGTCTATGCTT 58.850 29.630 0.00 0.00 41.96 3.91
567 581 9.638239 CAAAGCCTTTTAATTTGTCTATGCTTA 57.362 29.630 0.00 0.00 34.54 3.09
568 582 9.639601 AAAGCCTTTTAATTTGTCTATGCTTAC 57.360 29.630 0.00 0.00 34.54 2.34
569 583 8.348285 AGCCTTTTAATTTGTCTATGCTTACA 57.652 30.769 0.00 0.00 0.00 2.41
570 584 8.971073 AGCCTTTTAATTTGTCTATGCTTACAT 58.029 29.630 0.00 0.00 40.49 2.29
571 585 9.586435 GCCTTTTAATTTGTCTATGCTTACATT 57.414 29.630 0.00 0.00 37.74 2.71
580 594 9.890629 TTTGTCTATGCTTACATTAACATCTCT 57.109 29.630 0.00 0.00 37.74 3.10
581 595 8.877808 TGTCTATGCTTACATTAACATCTCTG 57.122 34.615 0.00 0.00 37.74 3.35
582 596 8.478066 TGTCTATGCTTACATTAACATCTCTGT 58.522 33.333 0.00 0.00 37.74 3.41
583 597 9.319143 GTCTATGCTTACATTAACATCTCTGTT 57.681 33.333 0.00 0.00 41.82 3.16
584 598 9.890629 TCTATGCTTACATTAACATCTCTGTTT 57.109 29.630 0.00 0.00 40.64 2.83
586 600 7.744087 TGCTTACATTAACATCTCTGTTTGT 57.256 32.000 0.00 0.00 43.05 2.83
587 601 8.165239 TGCTTACATTAACATCTCTGTTTGTT 57.835 30.769 0.00 0.00 43.05 2.83
590 604 9.950680 CTTACATTAACATCTCTGTTTGTTTGT 57.049 29.630 0.00 0.00 43.05 2.83
593 607 9.086336 ACATTAACATCTCTGTTTGTTTGTTTG 57.914 29.630 0.00 0.00 43.05 2.93
594 608 9.086336 CATTAACATCTCTGTTTGTTTGTTTGT 57.914 29.630 0.00 0.00 43.05 2.83
596 610 7.961325 AACATCTCTGTTTGTTTGTTTGTTT 57.039 28.000 0.00 0.00 43.05 2.83
597 611 7.961325 ACATCTCTGTTTGTTTGTTTGTTTT 57.039 28.000 0.00 0.00 28.70 2.43
598 612 8.376889 ACATCTCTGTTTGTTTGTTTGTTTTT 57.623 26.923 0.00 0.00 28.70 1.94
635 712 0.250124 TCTGTTTTGCCATCGTCGGT 60.250 50.000 0.00 0.00 0.00 4.69
670 747 2.306341 ATGCATGACACGGAGAGAAG 57.694 50.000 0.00 0.00 0.00 2.85
693 770 1.734477 CTCGTCTCACCAAGTGGCG 60.734 63.158 0.00 0.00 39.32 5.69
698 776 3.164977 TCACCAAGTGGCGACCCA 61.165 61.111 0.00 0.00 39.32 4.51
780 865 4.306471 CGTCGCACGCCAAAGCAA 62.306 61.111 0.00 0.00 39.83 3.91
781 866 2.427410 GTCGCACGCCAAAGCAAG 60.427 61.111 0.00 0.00 39.83 4.01
794 879 4.447365 GCAAGAAGCATCACACGC 57.553 55.556 0.00 0.00 44.79 5.34
795 880 1.154150 GCAAGAAGCATCACACGCC 60.154 57.895 0.00 0.00 44.79 5.68
821 1398 3.297620 GGGGCAACACCTGTGCAG 61.298 66.667 0.00 0.00 39.10 4.41
853 1430 2.033236 CGTACACAGCAAACGTGTCAAT 60.033 45.455 0.00 0.00 44.11 2.57
854 1431 2.473530 ACACAGCAAACGTGTCAATG 57.526 45.000 0.00 0.00 44.11 2.82
861 1438 0.109781 AAACGTGTCAATGCGATGCC 60.110 50.000 0.00 0.00 0.00 4.40
978 1556 2.040544 GGGGCATCGTGTCAACCAG 61.041 63.158 0.00 0.00 0.00 4.00
1096 1699 2.203549 CTCTCCTTGGCCCTTGGACC 62.204 65.000 0.00 0.00 0.00 4.46
1099 1702 4.659172 CTTGGCCCTTGGACCGCA 62.659 66.667 0.00 0.00 0.00 5.69
1164 1773 1.667830 CACCAACGTCGACTGGCAT 60.668 57.895 20.56 2.96 36.03 4.40
1176 1785 2.143122 GACTGGCATGAGAACGACAAA 58.857 47.619 0.00 0.00 0.00 2.83
1185 1794 3.466836 TGAGAACGACAAAGAGCACATT 58.533 40.909 0.00 0.00 0.00 2.71
1194 1803 1.896220 AAGAGCACATTTTCTCCGCA 58.104 45.000 0.00 0.00 0.00 5.69
1486 2112 2.438975 CATCCGGTGCACCATGCT 60.439 61.111 34.16 14.36 45.31 3.79
1511 2137 2.338984 GTGCTCAGGGTCGTCGTT 59.661 61.111 0.00 0.00 0.00 3.85
1529 2155 3.003173 CCCAAGGACGAGGAGGCA 61.003 66.667 0.00 0.00 0.00 4.75
1562 2188 1.099295 ACGTCCGCTCCATCGACATA 61.099 55.000 0.00 0.00 0.00 2.29
1565 2191 1.106944 TCCGCTCCATCGACATAGCA 61.107 55.000 13.28 0.00 34.60 3.49
1589 2215 3.419759 CTAAAAGCACCGCGCCGT 61.420 61.111 0.00 0.00 44.04 5.68
1590 2216 3.645157 CTAAAAGCACCGCGCCGTG 62.645 63.158 22.21 22.21 44.04 4.94
1596 2222 4.444024 CACCGCGCCGTGACAATG 62.444 66.667 22.08 0.00 35.68 2.82
1769 2525 6.426937 GTGTTGAGTCCAAGAATTTACTGCTA 59.573 38.462 0.00 0.00 32.06 3.49
1813 2569 1.163554 GCAGCAGAAAGGACCAGAAG 58.836 55.000 0.00 0.00 0.00 2.85
1814 2570 1.163554 CAGCAGAAAGGACCAGAAGC 58.836 55.000 0.00 0.00 0.00 3.86
1832 2588 1.747355 AGCAGATTTGGAAGATTGGCG 59.253 47.619 0.00 0.00 0.00 5.69
1937 2693 6.516194 GCGTACTCCCTCTAGCACAAATTATA 60.516 42.308 0.00 0.00 0.00 0.98
1957 2713 1.077930 CGTCCACTCTCCCCGTAGA 60.078 63.158 0.00 0.00 0.00 2.59
2039 2796 3.320626 TCTTCTTGATCAGCTGTTGACG 58.679 45.455 14.67 0.00 38.99 4.35
2065 2822 1.601903 CAGGTAAGTGCTTTGCAACGA 59.398 47.619 7.19 0.00 41.47 3.85
2102 2859 0.324830 ATATAGGCCGCTCTCCCTCC 60.325 60.000 0.00 0.00 32.65 4.30
2176 2940 4.835927 CTCATGTCGTGGGCCTAC 57.164 61.111 9.66 9.66 0.00 3.18
2189 2953 0.035343 GGCCTACTTTCTGGTGGTCC 60.035 60.000 0.00 0.00 0.00 4.46
2190 2954 0.391263 GCCTACTTTCTGGTGGTCCG 60.391 60.000 0.00 0.00 36.30 4.79
2192 2956 1.337823 CCTACTTTCTGGTGGTCCGTG 60.338 57.143 0.00 0.00 36.30 4.94
2193 2957 1.616865 CTACTTTCTGGTGGTCCGTGA 59.383 52.381 0.00 0.00 36.30 4.35
2195 2959 1.210967 ACTTTCTGGTGGTCCGTGAAA 59.789 47.619 0.00 0.00 36.88 2.69
2196 2960 1.873591 CTTTCTGGTGGTCCGTGAAAG 59.126 52.381 13.47 13.47 43.22 2.62
2197 2961 0.107831 TTCTGGTGGTCCGTGAAAGG 59.892 55.000 0.00 0.00 36.30 3.11
2198 2962 0.761323 TCTGGTGGTCCGTGAAAGGA 60.761 55.000 0.00 0.00 38.11 3.36
2200 2964 0.768622 TGGTGGTCCGTGAAAGGAAT 59.231 50.000 0.00 0.00 42.77 3.01
2202 2966 1.539827 GGTGGTCCGTGAAAGGAATTG 59.460 52.381 0.00 0.00 42.77 2.32
2205 2969 0.526211 GTCCGTGAAAGGAATTGGGC 59.474 55.000 0.00 0.00 42.77 5.36
2206 2970 0.404040 TCCGTGAAAGGAATTGGGCT 59.596 50.000 0.00 0.00 37.36 5.19
2208 2972 2.040545 TCCGTGAAAGGAATTGGGCTTA 59.959 45.455 0.00 0.00 37.36 3.09
2210 2974 3.181487 CCGTGAAAGGAATTGGGCTTATG 60.181 47.826 0.00 0.00 0.00 1.90
2217 2981 3.389002 AGGAATTGGGCTTATGAATTGCC 59.611 43.478 0.00 0.00 45.42 4.52
2223 2987 0.031178 GCTTATGAATTGCCAGGCCG 59.969 55.000 9.64 0.00 0.00 6.13
2228 2992 0.392461 TGAATTGCCAGGCCGAGTAC 60.392 55.000 9.64 0.00 0.00 2.73
2243 3007 3.635331 CGAGTACTTCGGTTCTTTCACA 58.365 45.455 0.00 0.00 45.54 3.58
2244 3008 3.424529 CGAGTACTTCGGTTCTTTCACAC 59.575 47.826 0.00 0.00 45.54 3.82
2245 3009 3.725490 AGTACTTCGGTTCTTTCACACC 58.275 45.455 0.00 0.00 0.00 4.16
2252 3016 2.835027 GGTTCTTTCACACCGAAGAGT 58.165 47.619 0.00 0.00 34.32 3.24
2253 3017 3.986277 GGTTCTTTCACACCGAAGAGTA 58.014 45.455 0.00 0.00 34.32 2.59
2254 3018 3.739810 GGTTCTTTCACACCGAAGAGTAC 59.260 47.826 0.00 0.00 34.32 2.73
2255 3019 4.365723 GTTCTTTCACACCGAAGAGTACA 58.634 43.478 0.00 0.00 34.32 2.90
2256 3020 4.238761 TCTTTCACACCGAAGAGTACAG 57.761 45.455 0.00 0.00 34.32 2.74
2257 3021 3.635373 TCTTTCACACCGAAGAGTACAGT 59.365 43.478 0.00 0.00 34.32 3.55
2258 3022 4.823442 TCTTTCACACCGAAGAGTACAGTA 59.177 41.667 0.00 0.00 34.32 2.74
2259 3023 4.494350 TTCACACCGAAGAGTACAGTAC 57.506 45.455 2.05 2.05 0.00 2.73
2260 3024 3.748083 TCACACCGAAGAGTACAGTACT 58.252 45.455 13.41 13.41 42.86 2.73
2273 3037 4.932200 AGTACAGTACTCTTCTTGCATTGC 59.068 41.667 7.48 0.46 32.47 3.56
2274 3038 3.077359 ACAGTACTCTTCTTGCATTGCC 58.923 45.455 6.12 0.00 0.00 4.52
2275 3039 3.244700 ACAGTACTCTTCTTGCATTGCCT 60.245 43.478 6.12 0.00 0.00 4.75
2276 3040 4.020218 ACAGTACTCTTCTTGCATTGCCTA 60.020 41.667 6.12 0.00 0.00 3.93
2277 3041 4.569966 CAGTACTCTTCTTGCATTGCCTAG 59.430 45.833 6.12 3.94 0.00 3.02
2278 3042 3.710209 ACTCTTCTTGCATTGCCTAGT 57.290 42.857 6.12 0.00 0.00 2.57
2279 3043 4.826274 ACTCTTCTTGCATTGCCTAGTA 57.174 40.909 6.12 0.00 0.00 1.82
2280 3044 5.165961 ACTCTTCTTGCATTGCCTAGTAA 57.834 39.130 6.12 0.00 0.00 2.24
2281 3045 5.560724 ACTCTTCTTGCATTGCCTAGTAAA 58.439 37.500 6.12 0.00 0.00 2.01
2282 3046 6.003950 ACTCTTCTTGCATTGCCTAGTAAAA 58.996 36.000 6.12 0.00 0.00 1.52
2283 3047 6.490040 ACTCTTCTTGCATTGCCTAGTAAAAA 59.510 34.615 6.12 0.00 0.00 1.94
2284 3048 7.177392 ACTCTTCTTGCATTGCCTAGTAAAAAT 59.823 33.333 6.12 0.00 0.00 1.82
2285 3049 8.574251 TCTTCTTGCATTGCCTAGTAAAAATA 57.426 30.769 6.12 0.00 0.00 1.40
2286 3050 8.677300 TCTTCTTGCATTGCCTAGTAAAAATAG 58.323 33.333 6.12 0.00 0.00 1.73
2287 3051 8.574251 TTCTTGCATTGCCTAGTAAAAATAGA 57.426 30.769 6.12 0.00 0.00 1.98
2288 3052 7.985476 TCTTGCATTGCCTAGTAAAAATAGAC 58.015 34.615 6.12 0.00 0.00 2.59
2289 3053 7.829211 TCTTGCATTGCCTAGTAAAAATAGACT 59.171 33.333 6.12 0.00 0.00 3.24
2290 3054 7.553881 TGCATTGCCTAGTAAAAATAGACTC 57.446 36.000 6.12 0.00 0.00 3.36
2291 3055 6.542370 TGCATTGCCTAGTAAAAATAGACTCC 59.458 38.462 6.12 0.00 0.00 3.85
2292 3056 6.768381 GCATTGCCTAGTAAAAATAGACTCCT 59.232 38.462 0.00 0.00 0.00 3.69
2293 3057 7.041712 GCATTGCCTAGTAAAAATAGACTCCTC 60.042 40.741 0.00 0.00 0.00 3.71
2294 3058 7.490657 TTGCCTAGTAAAAATAGACTCCTCA 57.509 36.000 0.00 0.00 0.00 3.86
2295 3059 7.490657 TGCCTAGTAAAAATAGACTCCTCAA 57.509 36.000 0.00 0.00 0.00 3.02
2296 3060 7.913789 TGCCTAGTAAAAATAGACTCCTCAAA 58.086 34.615 0.00 0.00 0.00 2.69
2297 3061 8.380099 TGCCTAGTAAAAATAGACTCCTCAAAA 58.620 33.333 0.00 0.00 0.00 2.44
2298 3062 9.227777 GCCTAGTAAAAATAGACTCCTCAAAAA 57.772 33.333 0.00 0.00 0.00 1.94
2413 3177 5.134202 GGAAACCCATACAAAAGAACAGG 57.866 43.478 0.00 0.00 0.00 4.00
2414 3178 4.021456 GGAAACCCATACAAAAGAACAGGG 60.021 45.833 0.00 0.00 40.66 4.45
2415 3179 4.463050 AACCCATACAAAAGAACAGGGA 57.537 40.909 0.00 0.00 38.21 4.20
2416 3180 4.034285 ACCCATACAAAAGAACAGGGAG 57.966 45.455 0.00 0.00 38.21 4.30
2417 3181 3.655777 ACCCATACAAAAGAACAGGGAGA 59.344 43.478 0.00 0.00 38.21 3.71
2418 3182 4.263506 ACCCATACAAAAGAACAGGGAGAG 60.264 45.833 0.00 0.00 38.21 3.20
2419 3183 4.263506 CCCATACAAAAGAACAGGGAGAGT 60.264 45.833 0.00 0.00 36.96 3.24
2420 3184 4.697352 CCATACAAAAGAACAGGGAGAGTG 59.303 45.833 0.00 0.00 0.00 3.51
2421 3185 5.513094 CCATACAAAAGAACAGGGAGAGTGA 60.513 44.000 0.00 0.00 0.00 3.41
2422 3186 4.713792 ACAAAAGAACAGGGAGAGTGAT 57.286 40.909 0.00 0.00 0.00 3.06
2423 3187 5.825593 ACAAAAGAACAGGGAGAGTGATA 57.174 39.130 0.00 0.00 0.00 2.15
2424 3188 6.187727 ACAAAAGAACAGGGAGAGTGATAA 57.812 37.500 0.00 0.00 0.00 1.75
2425 3189 6.601332 ACAAAAGAACAGGGAGAGTGATAAA 58.399 36.000 0.00 0.00 0.00 1.40
2426 3190 7.234355 ACAAAAGAACAGGGAGAGTGATAAAT 58.766 34.615 0.00 0.00 0.00 1.40
2427 3191 8.383175 ACAAAAGAACAGGGAGAGTGATAAATA 58.617 33.333 0.00 0.00 0.00 1.40
2428 3192 9.231297 CAAAAGAACAGGGAGAGTGATAAATAA 57.769 33.333 0.00 0.00 0.00 1.40
2429 3193 8.794335 AAAGAACAGGGAGAGTGATAAATAAC 57.206 34.615 0.00 0.00 0.00 1.89
2430 3194 7.741554 AGAACAGGGAGAGTGATAAATAACT 57.258 36.000 0.00 0.00 0.00 2.24
2431 3195 8.840200 AGAACAGGGAGAGTGATAAATAACTA 57.160 34.615 0.00 0.00 0.00 2.24
2432 3196 9.268282 AGAACAGGGAGAGTGATAAATAACTAA 57.732 33.333 0.00 0.00 0.00 2.24
2433 3197 9.886132 GAACAGGGAGAGTGATAAATAACTAAA 57.114 33.333 0.00 0.00 0.00 1.85
2435 3199 9.838339 ACAGGGAGAGTGATAAATAACTAAATG 57.162 33.333 0.00 0.00 0.00 2.32
2448 3212 8.625786 AAATAACTAAATGAAACGTACCTGGT 57.374 30.769 4.05 4.05 0.00 4.00
2449 3213 5.934935 AACTAAATGAAACGTACCTGGTG 57.065 39.130 10.23 0.00 0.00 4.17
2450 3214 5.217978 ACTAAATGAAACGTACCTGGTGA 57.782 39.130 10.23 0.00 0.00 4.02
2451 3215 5.613329 ACTAAATGAAACGTACCTGGTGAA 58.387 37.500 10.23 0.00 0.00 3.18
2452 3216 6.235664 ACTAAATGAAACGTACCTGGTGAAT 58.764 36.000 10.23 0.00 0.00 2.57
2453 3217 7.388437 ACTAAATGAAACGTACCTGGTGAATA 58.612 34.615 10.23 0.00 0.00 1.75
2454 3218 7.879160 ACTAAATGAAACGTACCTGGTGAATAA 59.121 33.333 10.23 0.00 0.00 1.40
2455 3219 7.513371 AAATGAAACGTACCTGGTGAATAAA 57.487 32.000 10.23 0.00 0.00 1.40
2456 3220 5.927954 TGAAACGTACCTGGTGAATAAAC 57.072 39.130 10.23 0.00 0.00 2.01
2457 3221 5.366460 TGAAACGTACCTGGTGAATAAACA 58.634 37.500 10.23 0.00 0.00 2.83
2458 3222 5.467399 TGAAACGTACCTGGTGAATAAACAG 59.533 40.000 10.23 0.00 0.00 3.16
2459 3223 4.877378 ACGTACCTGGTGAATAAACAGA 57.123 40.909 10.23 0.00 34.21 3.41
2460 3224 5.416271 ACGTACCTGGTGAATAAACAGAT 57.584 39.130 10.23 0.00 34.21 2.90
2461 3225 5.175859 ACGTACCTGGTGAATAAACAGATG 58.824 41.667 10.23 0.00 34.21 2.90
2462 3226 4.570772 CGTACCTGGTGAATAAACAGATGG 59.429 45.833 10.23 0.00 34.21 3.51
2463 3227 3.968265 ACCTGGTGAATAAACAGATGGG 58.032 45.455 0.00 0.00 34.21 4.00
2464 3228 3.591527 ACCTGGTGAATAAACAGATGGGA 59.408 43.478 0.00 0.00 34.21 4.37
2465 3229 4.202441 CCTGGTGAATAAACAGATGGGAG 58.798 47.826 0.00 0.00 34.21 4.30
2466 3230 3.620488 TGGTGAATAAACAGATGGGAGC 58.380 45.455 0.00 0.00 0.00 4.70
2467 3231 3.266772 TGGTGAATAAACAGATGGGAGCT 59.733 43.478 0.00 0.00 0.00 4.09
2468 3232 4.473196 TGGTGAATAAACAGATGGGAGCTA 59.527 41.667 0.00 0.00 0.00 3.32
2469 3233 5.059833 GGTGAATAAACAGATGGGAGCTAG 58.940 45.833 0.00 0.00 0.00 3.42
2470 3234 5.163301 GGTGAATAAACAGATGGGAGCTAGA 60.163 44.000 0.00 0.00 0.00 2.43
2471 3235 6.465035 GGTGAATAAACAGATGGGAGCTAGAT 60.465 42.308 0.00 0.00 0.00 1.98
2472 3236 6.995091 GTGAATAAACAGATGGGAGCTAGATT 59.005 38.462 0.00 0.00 0.00 2.40
2473 3237 7.500559 GTGAATAAACAGATGGGAGCTAGATTT 59.499 37.037 0.00 0.00 0.00 2.17
2474 3238 8.055181 TGAATAAACAGATGGGAGCTAGATTTT 58.945 33.333 0.00 0.00 0.00 1.82
2475 3239 8.829373 AATAAACAGATGGGAGCTAGATTTTT 57.171 30.769 0.00 0.00 0.00 1.94
2499 3263 8.592105 TTTTCTGCCAAGAATTCACTATTTTG 57.408 30.769 8.44 2.21 42.04 2.44
2500 3264 6.899393 TCTGCCAAGAATTCACTATTTTGT 57.101 33.333 8.44 0.00 0.00 2.83
2501 3265 6.680810 TCTGCCAAGAATTCACTATTTTGTG 58.319 36.000 8.44 0.00 39.15 3.33
2502 3266 6.265196 TCTGCCAAGAATTCACTATTTTGTGT 59.735 34.615 8.44 0.00 38.90 3.72
2503 3267 7.446931 TCTGCCAAGAATTCACTATTTTGTGTA 59.553 33.333 8.44 0.00 38.90 2.90
2504 3268 7.592938 TGCCAAGAATTCACTATTTTGTGTAG 58.407 34.615 8.44 0.00 38.90 2.74
2505 3269 7.230510 TGCCAAGAATTCACTATTTTGTGTAGT 59.769 33.333 8.44 0.00 38.90 2.73
2506 3270 8.082242 GCCAAGAATTCACTATTTTGTGTAGTT 58.918 33.333 8.44 0.00 38.90 2.24
2507 3271 9.398170 CCAAGAATTCACTATTTTGTGTAGTTG 57.602 33.333 8.44 0.00 38.90 3.16
2529 3293 5.174395 TGAATTATTTCAAATGGTTGGCCG 58.826 37.500 0.00 0.00 38.90 6.13
2530 3294 2.663826 TATTTCAAATGGTTGGCCGC 57.336 45.000 0.00 0.00 37.67 6.53
2531 3295 0.389687 ATTTCAAATGGTTGGCCGCG 60.390 50.000 0.00 0.00 37.67 6.46
2532 3296 1.456196 TTTCAAATGGTTGGCCGCGA 61.456 50.000 8.23 0.00 37.67 5.87
2533 3297 1.456196 TTCAAATGGTTGGCCGCGAA 61.456 50.000 8.23 0.00 37.67 4.70
2534 3298 1.215117 CAAATGGTTGGCCGCGAAT 59.785 52.632 8.23 0.00 37.67 3.34
2535 3299 0.389687 CAAATGGTTGGCCGCGAATT 60.390 50.000 8.23 0.00 37.67 2.17
2536 3300 1.135257 CAAATGGTTGGCCGCGAATTA 60.135 47.619 8.23 0.00 37.67 1.40
2537 3301 0.454196 AATGGTTGGCCGCGAATTAC 59.546 50.000 8.23 0.00 37.67 1.89
2538 3302 0.393808 ATGGTTGGCCGCGAATTACT 60.394 50.000 8.23 0.00 37.67 2.24
2539 3303 0.249676 TGGTTGGCCGCGAATTACTA 59.750 50.000 8.23 0.00 37.67 1.82
2540 3304 1.134340 TGGTTGGCCGCGAATTACTAT 60.134 47.619 8.23 0.00 37.67 2.12
2541 3305 1.263217 GGTTGGCCGCGAATTACTATG 59.737 52.381 8.23 0.00 0.00 2.23
2542 3306 1.937899 GTTGGCCGCGAATTACTATGT 59.062 47.619 8.23 0.00 0.00 2.29
2543 3307 1.577468 TGGCCGCGAATTACTATGTG 58.423 50.000 8.23 0.00 0.00 3.21
2544 3308 0.865769 GGCCGCGAATTACTATGTGG 59.134 55.000 8.23 0.00 35.12 4.17
2545 3309 1.539496 GGCCGCGAATTACTATGTGGA 60.539 52.381 8.23 0.00 33.86 4.02
2546 3310 2.206750 GCCGCGAATTACTATGTGGAA 58.793 47.619 8.23 0.00 33.86 3.53
2547 3311 2.221055 GCCGCGAATTACTATGTGGAAG 59.779 50.000 8.23 0.00 33.86 3.46
2548 3312 3.454375 CCGCGAATTACTATGTGGAAGT 58.546 45.455 8.23 0.00 33.86 3.01
2549 3313 3.245284 CCGCGAATTACTATGTGGAAGTG 59.755 47.826 8.23 0.00 33.86 3.16
2550 3314 3.245284 CGCGAATTACTATGTGGAAGTGG 59.755 47.826 0.00 0.00 0.00 4.00
2551 3315 4.189231 GCGAATTACTATGTGGAAGTGGT 58.811 43.478 0.00 0.00 0.00 4.16
2552 3316 4.634443 GCGAATTACTATGTGGAAGTGGTT 59.366 41.667 0.00 0.00 0.00 3.67
2553 3317 5.447279 GCGAATTACTATGTGGAAGTGGTTG 60.447 44.000 0.00 0.00 0.00 3.77
2554 3318 5.447279 CGAATTACTATGTGGAAGTGGTTGC 60.447 44.000 0.00 0.00 0.00 4.17
2555 3319 2.200373 ACTATGTGGAAGTGGTTGCC 57.800 50.000 0.00 0.00 0.00 4.52
2556 3320 1.271926 ACTATGTGGAAGTGGTTGCCC 60.272 52.381 0.00 0.00 0.00 5.36
2557 3321 0.039035 TATGTGGAAGTGGTTGCCCC 59.961 55.000 0.00 0.00 0.00 5.80
2558 3322 2.017668 ATGTGGAAGTGGTTGCCCCA 62.018 55.000 0.00 0.00 42.51 4.96
2565 3329 3.548488 TGGTTGCCCCAAAAGCTG 58.452 55.556 0.00 0.00 41.50 4.24
2566 3330 1.382420 TGGTTGCCCCAAAAGCTGT 60.382 52.632 0.00 0.00 41.50 4.40
2567 3331 0.980231 TGGTTGCCCCAAAAGCTGTT 60.980 50.000 0.00 0.00 41.50 3.16
2568 3332 0.249868 GGTTGCCCCAAAAGCTGTTC 60.250 55.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
138 144 4.202020 TGAGTACTATGTTGAGTCATCCGC 60.202 45.833 0.00 0.00 0.00 5.54
157 163 7.939784 TCGGCTATGAAGTACATATATGAGT 57.060 36.000 19.63 0.31 40.18 3.41
177 183 1.332997 CTCTGAAGCAATGGATTCGGC 59.667 52.381 1.73 0.00 43.77 5.54
218 227 3.796504 GCAACTGTTGGTGAAATGTCCAG 60.797 47.826 21.01 0.00 35.05 3.86
234 243 1.592400 CTCACCATGCCCAGCAACTG 61.592 60.000 0.00 0.00 43.62 3.16
241 251 1.686587 CTACGATACTCACCATGCCCA 59.313 52.381 0.00 0.00 0.00 5.36
265 275 0.899019 TGCCGTGCAGGTACTATCAA 59.101 50.000 5.57 0.00 43.70 2.57
284 294 2.225963 CGTTTCACACCTCTCTACGACT 59.774 50.000 0.00 0.00 0.00 4.18
289 299 1.616865 CCACCGTTTCACACCTCTCTA 59.383 52.381 0.00 0.00 0.00 2.43
301 312 0.602905 CTTCTTCTCCGCCACCGTTT 60.603 55.000 0.00 0.00 0.00 3.60
307 318 4.760047 GCCGCTTCTTCTCCGCCA 62.760 66.667 0.00 0.00 0.00 5.69
328 339 3.570212 AACAGCACTCCCGGGCTT 61.570 61.111 18.49 0.42 38.56 4.35
337 348 1.069765 CGTCACCTCCAACAGCACT 59.930 57.895 0.00 0.00 0.00 4.40
340 351 1.668151 GTCCGTCACCTCCAACAGC 60.668 63.158 0.00 0.00 0.00 4.40
342 353 1.469335 GGAGTCCGTCACCTCCAACA 61.469 60.000 0.00 0.00 45.47 3.33
361 372 4.499357 GCCATACCCGTACTAGAACTTGAG 60.499 50.000 0.00 0.00 0.00 3.02
364 375 2.360165 CGCCATACCCGTACTAGAACTT 59.640 50.000 0.00 0.00 0.00 2.66
370 381 1.531365 CCCCGCCATACCCGTACTA 60.531 63.158 0.00 0.00 0.00 1.82
371 382 2.841044 CCCCGCCATACCCGTACT 60.841 66.667 0.00 0.00 0.00 2.73
392 403 2.505982 CCGCTCCAATCATCCCGT 59.494 61.111 0.00 0.00 0.00 5.28
397 408 2.572095 TTCGTCGCCGCTCCAATCAT 62.572 55.000 0.00 0.00 0.00 2.45
426 437 6.677913 TCTATTTTCGCTCCTTTCCTTTTTG 58.322 36.000 0.00 0.00 0.00 2.44
441 452 2.802816 CGCCTCCATCCTTCTATTTTCG 59.197 50.000 0.00 0.00 0.00 3.46
450 461 3.011517 ACCTGCGCCTCCATCCTT 61.012 61.111 4.18 0.00 0.00 3.36
464 475 3.031013 CACCAAAACCTTTTCCAGACCT 58.969 45.455 0.00 0.00 0.00 3.85
472 484 4.075682 CCAAAACCACACCAAAACCTTTT 58.924 39.130 0.00 0.00 0.00 2.27
474 486 2.907042 TCCAAAACCACACCAAAACCTT 59.093 40.909 0.00 0.00 0.00 3.50
475 487 2.541466 TCCAAAACCACACCAAAACCT 58.459 42.857 0.00 0.00 0.00 3.50
486 498 0.856982 ACCCTGTCCATCCAAAACCA 59.143 50.000 0.00 0.00 0.00 3.67
499 511 3.438183 ACGTAGGACTTTGATACCCTGT 58.562 45.455 0.00 0.00 0.00 4.00
501 513 5.703310 AGATACGTAGGACTTTGATACCCT 58.297 41.667 0.08 0.00 0.00 4.34
506 520 6.817140 GGACAAAAGATACGTAGGACTTTGAT 59.183 38.462 20.20 13.83 33.72 2.57
510 524 4.381292 CCGGACAAAAGATACGTAGGACTT 60.381 45.833 0.00 4.21 0.00 3.01
521 535 3.170717 TGTAGGAGTCCGGACAAAAGAT 58.829 45.455 35.00 14.66 0.00 2.40
525 539 2.549349 GCTTTGTAGGAGTCCGGACAAA 60.549 50.000 35.00 28.90 39.80 2.83
526 540 1.001633 GCTTTGTAGGAGTCCGGACAA 59.998 52.381 35.00 21.99 34.25 3.18
538 552 9.076596 GCATAGACAAATTAAAAGGCTTTGTAG 57.923 33.333 14.19 3.71 41.72 2.74
556 570 8.478066 ACAGAGATGTTAATGTAAGCATAGACA 58.522 33.333 0.00 0.00 35.76 3.41
557 571 8.879342 ACAGAGATGTTAATGTAAGCATAGAC 57.121 34.615 0.00 0.00 34.39 2.59
558 572 9.890629 AAACAGAGATGTTAATGTAAGCATAGA 57.109 29.630 0.00 0.00 34.39 1.98
559 573 9.926751 CAAACAGAGATGTTAATGTAAGCATAG 57.073 33.333 0.00 0.00 34.39 2.23
560 574 9.448438 ACAAACAGAGATGTTAATGTAAGCATA 57.552 29.630 0.00 0.00 34.39 3.14
561 575 8.340618 ACAAACAGAGATGTTAATGTAAGCAT 57.659 30.769 0.00 0.00 36.80 3.79
562 576 7.744087 ACAAACAGAGATGTTAATGTAAGCA 57.256 32.000 0.00 0.00 0.00 3.91
563 577 8.905702 CAAACAAACAGAGATGTTAATGTAAGC 58.094 33.333 0.00 0.00 38.75 3.09
564 578 9.950680 ACAAACAAACAGAGATGTTAATGTAAG 57.049 29.630 0.00 0.00 38.75 2.34
567 581 9.086336 CAAACAAACAAACAGAGATGTTAATGT 57.914 29.630 0.00 0.00 38.75 2.71
568 582 9.086336 ACAAACAAACAAACAGAGATGTTAATG 57.914 29.630 0.00 0.00 38.75 1.90
569 583 9.651913 AACAAACAAACAAACAGAGATGTTAAT 57.348 25.926 0.00 0.00 38.75 1.40
570 584 9.482627 AAACAAACAAACAAACAGAGATGTTAA 57.517 25.926 0.00 0.00 38.75 2.01
571 585 9.482627 AAAACAAACAAACAAACAGAGATGTTA 57.517 25.926 0.00 0.00 38.75 2.41
599 613 9.151471 GCAAAACAGAGATACTAATCTACACAA 57.849 33.333 0.00 0.00 42.73 3.33
600 614 7.764443 GGCAAAACAGAGATACTAATCTACACA 59.236 37.037 0.00 0.00 42.73 3.72
601 615 7.764443 TGGCAAAACAGAGATACTAATCTACAC 59.236 37.037 0.00 0.00 42.73 2.90
602 616 7.847096 TGGCAAAACAGAGATACTAATCTACA 58.153 34.615 0.00 0.00 42.73 2.74
603 617 8.894768 ATGGCAAAACAGAGATACTAATCTAC 57.105 34.615 0.00 0.00 42.73 2.59
604 618 7.867909 CGATGGCAAAACAGAGATACTAATCTA 59.132 37.037 0.00 0.00 42.73 1.98
605 619 6.703607 CGATGGCAAAACAGAGATACTAATCT 59.296 38.462 0.00 0.00 45.46 2.40
606 620 6.480320 ACGATGGCAAAACAGAGATACTAATC 59.520 38.462 0.00 0.00 0.00 1.75
607 621 6.349300 ACGATGGCAAAACAGAGATACTAAT 58.651 36.000 0.00 0.00 0.00 1.73
608 622 5.730550 ACGATGGCAAAACAGAGATACTAA 58.269 37.500 0.00 0.00 0.00 2.24
609 623 5.339008 ACGATGGCAAAACAGAGATACTA 57.661 39.130 0.00 0.00 0.00 1.82
610 624 4.184629 GACGATGGCAAAACAGAGATACT 58.815 43.478 0.00 0.00 0.00 2.12
611 625 3.000322 CGACGATGGCAAAACAGAGATAC 60.000 47.826 0.00 0.00 0.00 2.24
635 712 1.000052 TGCATTTGTACGTGGTCGAGA 60.000 47.619 0.00 0.00 40.62 4.04
670 747 2.159226 CCACTTGGTGAGACGAGATACC 60.159 54.545 0.00 0.00 35.23 2.73
693 770 2.282462 CAGGCTGGGTTGTGGGTC 60.282 66.667 6.61 0.00 0.00 4.46
780 865 1.446792 CGAGGCGTGTGATGCTTCT 60.447 57.895 0.88 0.00 34.48 2.85
781 866 1.687494 GACGAGGCGTGTGATGCTTC 61.687 60.000 0.00 0.00 41.37 3.86
805 1382 3.297620 CCTGCACAGGTGTTGCCC 61.298 66.667 8.61 0.00 43.61 5.36
842 1419 0.109781 GGCATCGCATTGACACGTTT 60.110 50.000 0.00 0.00 0.00 3.60
1164 1773 2.595124 TGTGCTCTTTGTCGTTCTCA 57.405 45.000 0.00 0.00 0.00 3.27
1176 1785 1.002430 TCTGCGGAGAAAATGTGCTCT 59.998 47.619 3.28 0.00 0.00 4.09
1194 1803 0.533755 CGTACGTACCGGGGATCTCT 60.534 60.000 19.67 0.00 0.00 3.10
1511 2137 2.683933 GCCTCCTCGTCCTTGGGA 60.684 66.667 0.00 0.00 0.00 4.37
1529 2155 2.588877 ACGTTGCGCTGCTTCTGT 60.589 55.556 9.73 0.00 0.00 3.41
1562 2188 2.423538 CGGTGCTTTTAGCCTTTATGCT 59.576 45.455 0.00 0.00 41.51 3.79
1565 2191 1.400494 CGCGGTGCTTTTAGCCTTTAT 59.600 47.619 0.00 0.00 41.51 1.40
1589 2215 3.726557 AAAGAGGAGATGGCATTGTCA 57.273 42.857 0.00 0.00 0.00 3.58
1590 2216 6.705863 AATAAAAGAGGAGATGGCATTGTC 57.294 37.500 0.00 1.57 0.00 3.18
1591 2217 6.264067 GCTAATAAAAGAGGAGATGGCATTGT 59.736 38.462 0.00 0.00 0.00 2.71
1594 2220 4.999950 CGCTAATAAAAGAGGAGATGGCAT 59.000 41.667 0.00 0.00 0.00 4.40
1595 2221 4.141711 ACGCTAATAAAAGAGGAGATGGCA 60.142 41.667 0.00 0.00 0.00 4.92
1596 2222 4.212214 CACGCTAATAAAAGAGGAGATGGC 59.788 45.833 0.00 0.00 0.00 4.40
1597 2223 5.360591 ACACGCTAATAAAAGAGGAGATGG 58.639 41.667 0.00 0.00 0.00 3.51
1598 2224 7.203910 AGTACACGCTAATAAAAGAGGAGATG 58.796 38.462 0.00 0.00 0.00 2.90
1599 2225 7.349412 AGTACACGCTAATAAAAGAGGAGAT 57.651 36.000 0.00 0.00 0.00 2.75
1813 2569 1.202336 CCGCCAATCTTCCAAATCTGC 60.202 52.381 0.00 0.00 0.00 4.26
1814 2570 1.406539 CCCGCCAATCTTCCAAATCTG 59.593 52.381 0.00 0.00 0.00 2.90
1832 2588 2.753446 GCTTTCTCTGCTGCCCCC 60.753 66.667 0.00 0.00 0.00 5.40
1890 2646 2.513897 GCGCGGTCCCTGCTAAAT 60.514 61.111 8.83 0.00 0.00 1.40
1918 2674 6.229936 ACGTTATAATTTGTGCTAGAGGGA 57.770 37.500 0.00 0.00 0.00 4.20
1937 2693 0.964358 CTACGGGGAGAGTGGACGTT 60.964 60.000 0.00 0.00 38.79 3.99
1993 2750 2.060275 TGGCCTAGATCAATGGCTCAT 58.940 47.619 18.54 0.00 45.45 2.90
2039 2796 0.605589 AAAGCACTTACCTGGACGGC 60.606 55.000 0.00 0.00 35.61 5.68
2065 2822 5.311649 CCTATATAATAGGCTCCATGGGCAT 59.688 44.000 21.92 18.62 0.00 4.40
2102 2859 2.572284 GAACGGGAGGAGGACGTG 59.428 66.667 0.00 0.00 41.12 4.49
2159 2922 0.537188 AAGTAGGCCCACGACATGAG 59.463 55.000 0.00 0.00 0.00 2.90
2163 2927 0.320374 CAGAAAGTAGGCCCACGACA 59.680 55.000 0.00 0.00 0.00 4.35
2176 2940 1.873591 CTTTCACGGACCACCAGAAAG 59.126 52.381 12.91 12.91 43.98 2.62
2189 2953 3.694072 TCATAAGCCCAATTCCTTTCACG 59.306 43.478 0.00 0.00 0.00 4.35
2190 2954 5.659440 TTCATAAGCCCAATTCCTTTCAC 57.341 39.130 0.00 0.00 0.00 3.18
2192 2956 5.525012 GCAATTCATAAGCCCAATTCCTTTC 59.475 40.000 0.00 0.00 0.00 2.62
2193 2957 5.430886 GCAATTCATAAGCCCAATTCCTTT 58.569 37.500 0.00 0.00 0.00 3.11
2195 2959 3.389002 GGCAATTCATAAGCCCAATTCCT 59.611 43.478 0.00 0.00 42.58 3.36
2196 2960 3.732212 GGCAATTCATAAGCCCAATTCC 58.268 45.455 0.00 0.00 42.58 3.01
2205 2969 1.605710 CTCGGCCTGGCAATTCATAAG 59.394 52.381 22.05 1.61 0.00 1.73
2206 2970 1.064758 ACTCGGCCTGGCAATTCATAA 60.065 47.619 22.05 0.00 0.00 1.90
2208 2972 0.546122 TACTCGGCCTGGCAATTCAT 59.454 50.000 22.05 2.85 0.00 2.57
2210 2974 0.107654 AGTACTCGGCCTGGCAATTC 60.108 55.000 22.05 1.35 0.00 2.17
2223 2987 3.739810 GGTGTGAAAGAACCGAAGTACTC 59.260 47.826 0.00 0.00 0.00 2.59
2232 2996 2.835027 ACTCTTCGGTGTGAAAGAACC 58.165 47.619 0.00 0.00 35.79 3.62
2233 2997 4.365723 TGTACTCTTCGGTGTGAAAGAAC 58.634 43.478 0.00 0.00 35.79 3.01
2234 2998 4.098960 ACTGTACTCTTCGGTGTGAAAGAA 59.901 41.667 0.00 0.00 35.79 2.52
2235 2999 3.635373 ACTGTACTCTTCGGTGTGAAAGA 59.365 43.478 0.00 0.00 35.79 2.52
2236 3000 3.978687 ACTGTACTCTTCGGTGTGAAAG 58.021 45.455 0.00 0.00 35.79 2.62
2237 3001 4.581824 AGTACTGTACTCTTCGGTGTGAAA 59.418 41.667 14.53 0.00 35.79 2.69
2238 3002 4.139786 AGTACTGTACTCTTCGGTGTGAA 58.860 43.478 14.53 0.00 32.47 3.18
2239 3003 3.748083 AGTACTGTACTCTTCGGTGTGA 58.252 45.455 14.53 0.00 32.47 3.58
2250 3014 4.932200 GCAATGCAAGAAGAGTACTGTACT 59.068 41.667 19.79 19.79 42.86 2.73
2251 3015 4.093556 GGCAATGCAAGAAGAGTACTGTAC 59.906 45.833 7.79 9.93 0.00 2.90
2252 3016 4.020218 AGGCAATGCAAGAAGAGTACTGTA 60.020 41.667 7.79 0.00 0.00 2.74
2253 3017 3.077359 GGCAATGCAAGAAGAGTACTGT 58.923 45.455 7.79 0.00 0.00 3.55
2254 3018 3.341823 AGGCAATGCAAGAAGAGTACTG 58.658 45.455 7.79 0.00 0.00 2.74
2255 3019 3.710209 AGGCAATGCAAGAAGAGTACT 57.290 42.857 7.79 0.00 0.00 2.73
2256 3020 4.508662 ACTAGGCAATGCAAGAAGAGTAC 58.491 43.478 7.79 0.00 0.00 2.73
2257 3021 4.826274 ACTAGGCAATGCAAGAAGAGTA 57.174 40.909 7.79 0.00 0.00 2.59
2258 3022 3.710209 ACTAGGCAATGCAAGAAGAGT 57.290 42.857 7.79 0.00 0.00 3.24
2259 3023 6.500684 TTTTACTAGGCAATGCAAGAAGAG 57.499 37.500 7.79 0.00 0.00 2.85
2260 3024 6.892658 TTTTTACTAGGCAATGCAAGAAGA 57.107 33.333 7.79 0.00 0.00 2.87
2261 3025 8.677300 TCTATTTTTACTAGGCAATGCAAGAAG 58.323 33.333 7.79 0.66 0.00 2.85
2262 3026 8.458843 GTCTATTTTTACTAGGCAATGCAAGAA 58.541 33.333 7.79 0.00 0.00 2.52
2263 3027 7.829211 AGTCTATTTTTACTAGGCAATGCAAGA 59.171 33.333 7.79 0.00 0.00 3.02
2264 3028 7.989826 AGTCTATTTTTACTAGGCAATGCAAG 58.010 34.615 7.79 6.42 0.00 4.01
2265 3029 7.067008 GGAGTCTATTTTTACTAGGCAATGCAA 59.933 37.037 7.79 0.00 0.00 4.08
2266 3030 6.542370 GGAGTCTATTTTTACTAGGCAATGCA 59.458 38.462 7.79 0.00 0.00 3.96
2267 3031 6.768381 AGGAGTCTATTTTTACTAGGCAATGC 59.232 38.462 0.00 0.00 0.00 3.56
2268 3032 7.987458 TGAGGAGTCTATTTTTACTAGGCAATG 59.013 37.037 0.00 0.00 0.00 2.82
2269 3033 8.090788 TGAGGAGTCTATTTTTACTAGGCAAT 57.909 34.615 0.00 0.00 0.00 3.56
2270 3034 7.490657 TGAGGAGTCTATTTTTACTAGGCAA 57.509 36.000 0.00 0.00 0.00 4.52
2271 3035 7.490657 TTGAGGAGTCTATTTTTACTAGGCA 57.509 36.000 0.00 0.00 0.00 4.75
2272 3036 8.788325 TTTTGAGGAGTCTATTTTTACTAGGC 57.212 34.615 0.00 0.00 0.00 3.93
2371 3135 9.293404 GGTTTCCCTGTACTTCTTTTATACTTT 57.707 33.333 0.00 0.00 0.00 2.66
2372 3136 7.886970 GGGTTTCCCTGTACTTCTTTTATACTT 59.113 37.037 0.00 0.00 41.34 2.24
2373 3137 7.017850 TGGGTTTCCCTGTACTTCTTTTATACT 59.982 37.037 6.38 0.00 45.70 2.12
2374 3138 7.170277 TGGGTTTCCCTGTACTTCTTTTATAC 58.830 38.462 6.38 0.00 45.70 1.47
2375 3139 7.332433 TGGGTTTCCCTGTACTTCTTTTATA 57.668 36.000 6.38 0.00 45.70 0.98
2376 3140 6.208840 TGGGTTTCCCTGTACTTCTTTTAT 57.791 37.500 6.38 0.00 45.70 1.40
2377 3141 5.649970 TGGGTTTCCCTGTACTTCTTTTA 57.350 39.130 6.38 0.00 45.70 1.52
2378 3142 4.529716 TGGGTTTCCCTGTACTTCTTTT 57.470 40.909 6.38 0.00 45.70 2.27
2379 3143 4.741928 ATGGGTTTCCCTGTACTTCTTT 57.258 40.909 6.38 0.00 45.70 2.52
2380 3144 4.600111 TGTATGGGTTTCCCTGTACTTCTT 59.400 41.667 6.38 0.00 45.70 2.52
2381 3145 4.172807 TGTATGGGTTTCCCTGTACTTCT 58.827 43.478 6.38 0.00 45.70 2.85
2382 3146 4.563140 TGTATGGGTTTCCCTGTACTTC 57.437 45.455 6.38 0.00 45.70 3.01
2383 3147 5.327737 TTTGTATGGGTTTCCCTGTACTT 57.672 39.130 6.38 0.00 45.70 2.24
2384 3148 5.073965 TCTTTTGTATGGGTTTCCCTGTACT 59.926 40.000 6.38 0.00 45.70 2.73
2385 3149 5.318630 TCTTTTGTATGGGTTTCCCTGTAC 58.681 41.667 6.38 9.36 45.70 2.90
2386 3150 5.586155 TCTTTTGTATGGGTTTCCCTGTA 57.414 39.130 6.38 0.00 45.70 2.74
2387 3151 4.463050 TCTTTTGTATGGGTTTCCCTGT 57.537 40.909 6.38 0.00 45.70 4.00
2388 3152 4.586841 TGTTCTTTTGTATGGGTTTCCCTG 59.413 41.667 6.38 0.00 45.70 4.45
2389 3153 4.810345 TGTTCTTTTGTATGGGTTTCCCT 58.190 39.130 6.38 0.00 45.70 4.20
2390 3154 4.021456 CCTGTTCTTTTGTATGGGTTTCCC 60.021 45.833 0.00 0.00 45.71 3.97
2391 3155 4.021456 CCCTGTTCTTTTGTATGGGTTTCC 60.021 45.833 0.00 0.00 0.00 3.13
2392 3156 4.830600 TCCCTGTTCTTTTGTATGGGTTTC 59.169 41.667 0.00 0.00 35.00 2.78
2393 3157 4.810345 TCCCTGTTCTTTTGTATGGGTTT 58.190 39.130 0.00 0.00 35.00 3.27
2394 3158 4.105697 TCTCCCTGTTCTTTTGTATGGGTT 59.894 41.667 0.00 0.00 35.00 4.11
2395 3159 3.655777 TCTCCCTGTTCTTTTGTATGGGT 59.344 43.478 0.00 0.00 35.00 4.51
2396 3160 4.263506 ACTCTCCCTGTTCTTTTGTATGGG 60.264 45.833 0.00 0.00 34.76 4.00
2397 3161 4.697352 CACTCTCCCTGTTCTTTTGTATGG 59.303 45.833 0.00 0.00 0.00 2.74
2398 3162 5.551233 TCACTCTCCCTGTTCTTTTGTATG 58.449 41.667 0.00 0.00 0.00 2.39
2399 3163 5.825593 TCACTCTCCCTGTTCTTTTGTAT 57.174 39.130 0.00 0.00 0.00 2.29
2400 3164 5.825593 ATCACTCTCCCTGTTCTTTTGTA 57.174 39.130 0.00 0.00 0.00 2.41
2401 3165 4.713792 ATCACTCTCCCTGTTCTTTTGT 57.286 40.909 0.00 0.00 0.00 2.83
2402 3166 7.693969 ATTTATCACTCTCCCTGTTCTTTTG 57.306 36.000 0.00 0.00 0.00 2.44
2403 3167 9.232473 GTTATTTATCACTCTCCCTGTTCTTTT 57.768 33.333 0.00 0.00 0.00 2.27
2404 3168 8.606830 AGTTATTTATCACTCTCCCTGTTCTTT 58.393 33.333 0.00 0.00 0.00 2.52
2405 3169 8.152023 AGTTATTTATCACTCTCCCTGTTCTT 57.848 34.615 0.00 0.00 0.00 2.52
2406 3170 7.741554 AGTTATTTATCACTCTCCCTGTTCT 57.258 36.000 0.00 0.00 0.00 3.01
2407 3171 9.886132 TTTAGTTATTTATCACTCTCCCTGTTC 57.114 33.333 0.00 0.00 0.00 3.18
2409 3173 9.838339 CATTTAGTTATTTATCACTCTCCCTGT 57.162 33.333 0.00 0.00 0.00 4.00
2422 3186 9.723601 ACCAGGTACGTTTCATTTAGTTATTTA 57.276 29.630 0.00 0.00 0.00 1.40
2423 3187 8.508875 CACCAGGTACGTTTCATTTAGTTATTT 58.491 33.333 0.00 0.00 0.00 1.40
2424 3188 7.879160 TCACCAGGTACGTTTCATTTAGTTATT 59.121 33.333 0.00 0.00 0.00 1.40
2425 3189 7.388437 TCACCAGGTACGTTTCATTTAGTTAT 58.612 34.615 0.00 0.00 0.00 1.89
2426 3190 6.757237 TCACCAGGTACGTTTCATTTAGTTA 58.243 36.000 0.00 0.00 0.00 2.24
2427 3191 5.613329 TCACCAGGTACGTTTCATTTAGTT 58.387 37.500 0.00 0.00 0.00 2.24
2428 3192 5.217978 TCACCAGGTACGTTTCATTTAGT 57.782 39.130 0.00 0.00 0.00 2.24
2429 3193 6.737254 ATTCACCAGGTACGTTTCATTTAG 57.263 37.500 0.00 0.00 0.00 1.85
2430 3194 8.505625 GTTTATTCACCAGGTACGTTTCATTTA 58.494 33.333 0.00 0.00 0.00 1.40
2431 3195 7.013464 TGTTTATTCACCAGGTACGTTTCATTT 59.987 33.333 0.00 0.00 0.00 2.32
2432 3196 6.487331 TGTTTATTCACCAGGTACGTTTCATT 59.513 34.615 0.00 0.00 0.00 2.57
2433 3197 5.998981 TGTTTATTCACCAGGTACGTTTCAT 59.001 36.000 0.00 0.00 0.00 2.57
2434 3198 5.366460 TGTTTATTCACCAGGTACGTTTCA 58.634 37.500 0.00 0.00 0.00 2.69
2435 3199 5.697633 TCTGTTTATTCACCAGGTACGTTTC 59.302 40.000 0.00 0.00 0.00 2.78
2436 3200 5.613329 TCTGTTTATTCACCAGGTACGTTT 58.387 37.500 0.00 0.00 0.00 3.60
2437 3201 5.217978 TCTGTTTATTCACCAGGTACGTT 57.782 39.130 0.00 0.00 0.00 3.99
2438 3202 4.877378 TCTGTTTATTCACCAGGTACGT 57.123 40.909 0.00 0.00 0.00 3.57
2439 3203 4.570772 CCATCTGTTTATTCACCAGGTACG 59.429 45.833 0.00 0.00 0.00 3.67
2440 3204 4.881850 CCCATCTGTTTATTCACCAGGTAC 59.118 45.833 0.00 0.00 0.00 3.34
2441 3205 4.785914 TCCCATCTGTTTATTCACCAGGTA 59.214 41.667 0.00 0.00 0.00 3.08
2442 3206 3.591527 TCCCATCTGTTTATTCACCAGGT 59.408 43.478 0.00 0.00 0.00 4.00
2443 3207 4.202441 CTCCCATCTGTTTATTCACCAGG 58.798 47.826 0.00 0.00 0.00 4.45
2444 3208 3.629398 GCTCCCATCTGTTTATTCACCAG 59.371 47.826 0.00 0.00 0.00 4.00
2445 3209 3.266772 AGCTCCCATCTGTTTATTCACCA 59.733 43.478 0.00 0.00 0.00 4.17
2446 3210 3.891049 AGCTCCCATCTGTTTATTCACC 58.109 45.455 0.00 0.00 0.00 4.02
2447 3211 5.918608 TCTAGCTCCCATCTGTTTATTCAC 58.081 41.667 0.00 0.00 0.00 3.18
2448 3212 6.753913 ATCTAGCTCCCATCTGTTTATTCA 57.246 37.500 0.00 0.00 0.00 2.57
2449 3213 8.457238 AAAATCTAGCTCCCATCTGTTTATTC 57.543 34.615 0.00 0.00 0.00 1.75
2450 3214 8.829373 AAAAATCTAGCTCCCATCTGTTTATT 57.171 30.769 0.00 0.00 0.00 1.40
2473 3237 9.044150 CAAAATAGTGAATTCTTGGCAGAAAAA 57.956 29.630 7.05 0.00 42.53 1.94
2474 3238 8.203485 ACAAAATAGTGAATTCTTGGCAGAAAA 58.797 29.630 7.05 0.00 42.53 2.29
2475 3239 7.652909 CACAAAATAGTGAATTCTTGGCAGAAA 59.347 33.333 7.05 0.00 40.95 2.52
2476 3240 7.147312 CACAAAATAGTGAATTCTTGGCAGAA 58.853 34.615 7.05 2.63 41.42 3.02
2477 3241 6.265196 ACACAAAATAGTGAATTCTTGGCAGA 59.735 34.615 7.05 0.00 42.05 4.26
2478 3242 6.449698 ACACAAAATAGTGAATTCTTGGCAG 58.550 36.000 7.05 0.24 42.05 4.85
2479 3243 6.403866 ACACAAAATAGTGAATTCTTGGCA 57.596 33.333 7.05 0.00 42.05 4.92
2480 3244 7.593825 ACTACACAAAATAGTGAATTCTTGGC 58.406 34.615 7.05 0.00 42.05 4.52
2481 3245 9.398170 CAACTACACAAAATAGTGAATTCTTGG 57.602 33.333 7.05 0.00 42.05 3.61
2502 3266 7.821846 GGCCAACCATTTGAAATAATTCAACTA 59.178 33.333 5.44 0.00 44.22 2.24
2503 3267 6.654582 GGCCAACCATTTGAAATAATTCAACT 59.345 34.615 5.44 0.00 44.22 3.16
2504 3268 6.402011 CGGCCAACCATTTGAAATAATTCAAC 60.402 38.462 5.44 0.00 44.65 3.18
2505 3269 5.641209 CGGCCAACCATTTGAAATAATTCAA 59.359 36.000 2.24 1.70 43.93 2.69
2506 3270 5.174395 CGGCCAACCATTTGAAATAATTCA 58.826 37.500 2.24 0.00 38.80 2.57
2507 3271 4.033932 GCGGCCAACCATTTGAAATAATTC 59.966 41.667 2.24 0.00 34.24 2.17
2508 3272 3.938334 GCGGCCAACCATTTGAAATAATT 59.062 39.130 2.24 0.00 34.24 1.40
2509 3273 3.530535 GCGGCCAACCATTTGAAATAAT 58.469 40.909 2.24 0.00 34.24 1.28
2510 3274 2.672478 CGCGGCCAACCATTTGAAATAA 60.672 45.455 2.24 0.00 34.24 1.40
2511 3275 1.135257 CGCGGCCAACCATTTGAAATA 60.135 47.619 2.24 0.00 34.24 1.40
2512 3276 0.389687 CGCGGCCAACCATTTGAAAT 60.390 50.000 2.24 0.00 34.24 2.17
2513 3277 1.006805 CGCGGCCAACCATTTGAAA 60.007 52.632 2.24 0.00 34.24 2.69
2514 3278 1.456196 TTCGCGGCCAACCATTTGAA 61.456 50.000 6.13 0.00 34.24 2.69
2515 3279 1.247419 ATTCGCGGCCAACCATTTGA 61.247 50.000 6.13 0.00 34.24 2.69
2516 3280 0.389687 AATTCGCGGCCAACCATTTG 60.390 50.000 6.13 0.00 34.57 2.32
2517 3281 1.135228 GTAATTCGCGGCCAACCATTT 60.135 47.619 6.13 0.00 34.57 2.32
2518 3282 0.454196 GTAATTCGCGGCCAACCATT 59.546 50.000 6.13 0.00 34.57 3.16
2519 3283 0.393808 AGTAATTCGCGGCCAACCAT 60.394 50.000 6.13 0.00 34.57 3.55
2520 3284 0.249676 TAGTAATTCGCGGCCAACCA 59.750 50.000 6.13 0.00 34.57 3.67
2521 3285 1.263217 CATAGTAATTCGCGGCCAACC 59.737 52.381 6.13 0.00 0.00 3.77
2522 3286 1.937899 ACATAGTAATTCGCGGCCAAC 59.062 47.619 6.13 0.00 0.00 3.77
2523 3287 1.937223 CACATAGTAATTCGCGGCCAA 59.063 47.619 6.13 0.00 0.00 4.52
2524 3288 1.577468 CACATAGTAATTCGCGGCCA 58.423 50.000 6.13 0.00 0.00 5.36
2525 3289 0.865769 CCACATAGTAATTCGCGGCC 59.134 55.000 6.13 0.00 0.00 6.13
2526 3290 1.860676 TCCACATAGTAATTCGCGGC 58.139 50.000 6.13 0.00 0.00 6.53
2527 3291 3.245284 CACTTCCACATAGTAATTCGCGG 59.755 47.826 6.13 0.00 0.00 6.46
2528 3292 3.245284 CCACTTCCACATAGTAATTCGCG 59.755 47.826 0.00 0.00 0.00 5.87
2529 3293 4.189231 ACCACTTCCACATAGTAATTCGC 58.811 43.478 0.00 0.00 0.00 4.70
2530 3294 5.447279 GCAACCACTTCCACATAGTAATTCG 60.447 44.000 0.00 0.00 0.00 3.34
2531 3295 5.163652 GGCAACCACTTCCACATAGTAATTC 60.164 44.000 0.00 0.00 0.00 2.17
2532 3296 4.705023 GGCAACCACTTCCACATAGTAATT 59.295 41.667 0.00 0.00 0.00 1.40
2533 3297 4.270008 GGCAACCACTTCCACATAGTAAT 58.730 43.478 0.00 0.00 0.00 1.89
2534 3298 3.681593 GGCAACCACTTCCACATAGTAA 58.318 45.455 0.00 0.00 0.00 2.24
2535 3299 3.343941 GGCAACCACTTCCACATAGTA 57.656 47.619 0.00 0.00 0.00 1.82
2536 3300 2.200373 GGCAACCACTTCCACATAGT 57.800 50.000 0.00 0.00 0.00 2.12
2550 3314 3.289128 GAACAGCTTTTGGGGCAAC 57.711 52.632 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.