Multiple sequence alignment - TraesCS7B01G087900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G087900 chr7B 100.000 3288 0 0 1 3288 103117892 103114605 0.000000e+00 6072
1 TraesCS7B01G087900 chr7D 94.279 1678 70 13 820 2477 137872092 137870421 0.000000e+00 2543
2 TraesCS7B01G087900 chr7D 92.878 337 23 1 2468 2803 137870315 137869979 3.810000e-134 488
3 TraesCS7B01G087900 chr7D 89.456 294 29 2 2995 3288 137851577 137851286 1.440000e-98 370
4 TraesCS7B01G087900 chr7D 75.058 433 88 16 970 1394 137790118 137789698 2.020000e-42 183
5 TraesCS7B01G087900 chr7A 94.337 1607 67 7 894 2477 137827360 137825755 0.000000e+00 2442
6 TraesCS7B01G087900 chr7A 83.374 812 121 13 10 812 7395865 7395059 0.000000e+00 739
7 TraesCS7B01G087900 chr7A 89.709 447 30 6 2856 3288 137824479 137824035 1.030000e-154 556
8 TraesCS7B01G087900 chr7A 92.604 338 23 2 2468 2803 137825647 137825310 4.930000e-133 484
9 TraesCS7B01G087900 chr3B 89.474 817 77 7 1 811 418879460 418880273 0.000000e+00 1024
10 TraesCS7B01G087900 chr3D 83.012 777 122 9 30 799 101101563 101102336 0.000000e+00 695
11 TraesCS7B01G087900 chr3D 82.021 584 95 9 232 809 427629212 427629791 3.810000e-134 488
12 TraesCS7B01G087900 chrUn 98.718 390 5 0 1238 1627 480092364 480092753 0.000000e+00 693
13 TraesCS7B01G087900 chr5B 79.707 818 155 10 3 812 488010492 488011306 6.120000e-162 580
14 TraesCS7B01G087900 chr6A 83.652 575 87 6 2 570 499659760 499659187 4.830000e-148 534
15 TraesCS7B01G087900 chr2B 82.569 545 88 5 1 538 546829356 546829900 1.070000e-129 473


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G087900 chr7B 103114605 103117892 3287 True 6072.000000 6072 100.000000 1 3288 1 chr7B.!!$R1 3287
1 TraesCS7B01G087900 chr7D 137869979 137872092 2113 True 1515.500000 2543 93.578500 820 2803 2 chr7D.!!$R3 1983
2 TraesCS7B01G087900 chr7A 137824035 137827360 3325 True 1160.666667 2442 92.216667 894 3288 3 chr7A.!!$R2 2394
3 TraesCS7B01G087900 chr7A 7395059 7395865 806 True 739.000000 739 83.374000 10 812 1 chr7A.!!$R1 802
4 TraesCS7B01G087900 chr3B 418879460 418880273 813 False 1024.000000 1024 89.474000 1 811 1 chr3B.!!$F1 810
5 TraesCS7B01G087900 chr3D 101101563 101102336 773 False 695.000000 695 83.012000 30 799 1 chr3D.!!$F1 769
6 TraesCS7B01G087900 chr3D 427629212 427629791 579 False 488.000000 488 82.021000 232 809 1 chr3D.!!$F2 577
7 TraesCS7B01G087900 chr5B 488010492 488011306 814 False 580.000000 580 79.707000 3 812 1 chr5B.!!$F1 809
8 TraesCS7B01G087900 chr6A 499659187 499659760 573 True 534.000000 534 83.652000 2 570 1 chr6A.!!$R1 568
9 TraesCS7B01G087900 chr2B 546829356 546829900 544 False 473.000000 473 82.569000 1 538 1 chr2B.!!$F1 537

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
785 794 0.111704 CGAAACCATAATCGCGCGAG 60.112 55.0 36.99 24.95 31.71 5.03 F
786 795 0.232303 GAAACCATAATCGCGCGAGG 59.768 55.0 36.99 32.06 0.00 4.63 F
2133 2160 0.875059 GCTGTGCTGGGAAACTACAC 59.125 55.0 0.00 0.00 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1593 1620 0.541998 TGAAGGGCTCCGAGAAGACA 60.542 55.0 0.0 0.0 0.00 3.41 R
2182 2209 0.544595 GGTACTCACCCAGGACAGGT 60.545 60.0 0.0 0.0 37.78 4.00 R
3159 4110 2.162408 GGCCACTCACTTGCTGTTAATC 59.838 50.0 0.0 0.0 0.00 1.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.955881 GCCCTAGGCGACCACAAGT 61.956 63.158 2.05 0.00 39.62 3.16
47 48 1.336755 GGCGACCACAAGTGAAACAAT 59.663 47.619 0.94 0.00 41.43 2.71
71 73 3.064545 GTGAGGCATTGCTCATACTGAAC 59.935 47.826 8.82 0.00 31.84 3.18
151 153 3.256631 AGGCTTGTTGACATCAATGGAAC 59.743 43.478 0.00 0.00 38.24 3.62
201 203 0.179250 CGAACTGAACCGATGTTGCG 60.179 55.000 0.00 0.00 33.97 4.85
270 274 2.556559 GGTTGTAGGGCAGATTTGGGAA 60.557 50.000 0.00 0.00 0.00 3.97
300 304 1.197721 CATGTGGAGTCGGTCAAAAGC 59.802 52.381 0.00 0.00 0.00 3.51
311 315 2.238521 GGTCAAAAGCAACCTCATCCA 58.761 47.619 0.00 0.00 32.54 3.41
317 321 0.913451 AGCAACCTCATCCAGCCTCT 60.913 55.000 0.00 0.00 0.00 3.69
323 327 1.406614 CCTCATCCAGCCTCTTGTGAC 60.407 57.143 0.00 0.00 0.00 3.67
396 400 3.005897 CCCGTCCAGATTCTATCACGATT 59.994 47.826 11.01 0.00 30.56 3.34
451 455 2.770802 CTCTCCCATGGATCTGAACTGT 59.229 50.000 15.22 0.00 0.00 3.55
462 466 3.254093 TCTGAACTGTAGACCCCTTGA 57.746 47.619 0.00 0.00 0.00 3.02
474 478 1.382629 CCCTTGAATTCCCCCACGT 59.617 57.895 2.27 0.00 0.00 4.49
502 506 0.313672 GAGCGTTGGCAATGGTTTCA 59.686 50.000 23.48 0.00 43.41 2.69
590 598 1.012086 CATCAATCACCAGAGGCGTG 58.988 55.000 0.00 0.00 0.00 5.34
602 610 2.268920 GGCGTGGCCTCTTCATCA 59.731 61.111 3.32 0.00 46.69 3.07
603 611 1.153086 GGCGTGGCCTCTTCATCAT 60.153 57.895 3.32 0.00 46.69 2.45
604 612 1.162800 GGCGTGGCCTCTTCATCATC 61.163 60.000 3.32 0.00 46.69 2.92
650 659 2.263540 GTTTCGCCCTAGCCGACA 59.736 61.111 3.59 0.00 34.57 4.35
664 673 2.037527 GACAGGGGAGAGTCGGGT 59.962 66.667 0.00 0.00 0.00 5.28
695 704 1.281656 CTCGCGTTTTGGGTTGGTC 59.718 57.895 5.77 0.00 0.00 4.02
729 738 2.666190 GAGCTCAAGTGCGGCACA 60.666 61.111 32.29 13.21 36.74 4.57
749 758 3.635204 GATCGAATCGGGCAGCTG 58.365 61.111 10.11 10.11 0.00 4.24
750 759 2.590007 ATCGAATCGGGCAGCTGC 60.590 61.111 30.88 30.88 41.14 5.25
760 769 3.426568 GCAGCTGCCGTCAAGGTC 61.427 66.667 28.76 0.00 43.70 3.85
761 770 2.743928 CAGCTGCCGTCAAGGTCC 60.744 66.667 0.00 0.00 43.70 4.46
762 771 3.241530 AGCTGCCGTCAAGGTCCA 61.242 61.111 0.00 0.00 43.70 4.02
763 772 3.050275 GCTGCCGTCAAGGTCCAC 61.050 66.667 0.00 0.00 43.70 4.02
764 773 2.358737 CTGCCGTCAAGGTCCACC 60.359 66.667 0.00 0.00 43.70 4.61
765 774 4.308458 TGCCGTCAAGGTCCACCG 62.308 66.667 0.00 0.00 43.70 4.94
768 777 4.351938 CGTCAAGGTCCACCGCGA 62.352 66.667 8.23 0.00 42.08 5.87
769 778 2.029964 GTCAAGGTCCACCGCGAA 59.970 61.111 8.23 0.00 42.08 4.70
770 779 1.595929 GTCAAGGTCCACCGCGAAA 60.596 57.895 8.23 0.00 42.08 3.46
771 780 1.595929 TCAAGGTCCACCGCGAAAC 60.596 57.895 8.23 0.00 42.08 2.78
772 781 2.281276 AAGGTCCACCGCGAAACC 60.281 61.111 8.23 9.44 42.08 3.27
773 782 3.109592 AAGGTCCACCGCGAAACCA 62.110 57.895 8.23 0.00 42.08 3.67
774 783 2.359478 GGTCCACCGCGAAACCAT 60.359 61.111 8.23 0.00 0.00 3.55
775 784 1.078988 GGTCCACCGCGAAACCATA 60.079 57.895 8.23 0.00 0.00 2.74
776 785 0.674269 GGTCCACCGCGAAACCATAA 60.674 55.000 8.23 0.00 0.00 1.90
777 786 1.375551 GTCCACCGCGAAACCATAAT 58.624 50.000 8.23 0.00 0.00 1.28
778 787 1.329599 GTCCACCGCGAAACCATAATC 59.670 52.381 8.23 0.00 0.00 1.75
779 788 0.303493 CCACCGCGAAACCATAATCG 59.697 55.000 8.23 0.00 41.81 3.34
783 792 4.471814 CGAAACCATAATCGCGCG 57.528 55.556 26.76 26.76 31.71 6.86
784 793 1.921475 CGAAACCATAATCGCGCGA 59.079 52.632 36.65 36.65 31.71 5.87
785 794 0.111704 CGAAACCATAATCGCGCGAG 60.112 55.000 36.99 24.95 31.71 5.03
786 795 0.232303 GAAACCATAATCGCGCGAGG 59.768 55.000 36.99 32.06 0.00 4.63
787 796 1.772063 AAACCATAATCGCGCGAGGC 61.772 55.000 36.99 0.00 38.69 4.70
800 809 1.959747 GCGAGGCGTTTTTAGGTTTC 58.040 50.000 0.00 0.00 0.00 2.78
801 810 1.264826 GCGAGGCGTTTTTAGGTTTCA 59.735 47.619 0.00 0.00 0.00 2.69
802 811 2.287129 GCGAGGCGTTTTTAGGTTTCAA 60.287 45.455 0.00 0.00 0.00 2.69
803 812 3.551551 CGAGGCGTTTTTAGGTTTCAAG 58.448 45.455 0.00 0.00 0.00 3.02
804 813 3.249080 CGAGGCGTTTTTAGGTTTCAAGA 59.751 43.478 0.00 0.00 0.00 3.02
805 814 4.610680 CGAGGCGTTTTTAGGTTTCAAGAG 60.611 45.833 0.00 0.00 0.00 2.85
806 815 3.568430 AGGCGTTTTTAGGTTTCAAGAGG 59.432 43.478 0.00 0.00 0.00 3.69
807 816 3.566742 GGCGTTTTTAGGTTTCAAGAGGA 59.433 43.478 0.00 0.00 0.00 3.71
808 817 4.037089 GGCGTTTTTAGGTTTCAAGAGGAA 59.963 41.667 0.00 0.00 0.00 3.36
809 818 5.450826 GGCGTTTTTAGGTTTCAAGAGGAAA 60.451 40.000 0.00 0.00 43.07 3.13
810 819 6.037726 GCGTTTTTAGGTTTCAAGAGGAAAA 58.962 36.000 0.00 0.00 46.53 2.29
811 820 6.532302 GCGTTTTTAGGTTTCAAGAGGAAAAA 59.468 34.615 0.00 0.00 46.53 1.94
812 821 7.463648 GCGTTTTTAGGTTTCAAGAGGAAAAAC 60.464 37.037 9.06 9.06 46.53 2.43
813 822 7.758076 CGTTTTTAGGTTTCAAGAGGAAAAACT 59.242 33.333 14.51 0.00 46.53 2.66
814 823 8.869897 GTTTTTAGGTTTCAAGAGGAAAAACTG 58.130 33.333 11.03 0.00 46.53 3.16
815 824 7.712204 TTTAGGTTTCAAGAGGAAAAACTGT 57.288 32.000 0.00 0.00 46.53 3.55
816 825 8.810990 TTTAGGTTTCAAGAGGAAAAACTGTA 57.189 30.769 0.00 0.00 46.53 2.74
817 826 6.944234 AGGTTTCAAGAGGAAAAACTGTAG 57.056 37.500 0.00 0.00 46.53 2.74
818 827 5.299531 AGGTTTCAAGAGGAAAAACTGTAGC 59.700 40.000 0.00 0.00 46.53 3.58
823 832 6.588204 TCAAGAGGAAAAACTGTAGCAGTAA 58.412 36.000 1.97 0.00 44.62 2.24
829 838 7.360361 AGGAAAAACTGTAGCAGTAATTTTCG 58.640 34.615 20.72 0.00 44.62 3.46
842 851 8.233190 AGCAGTAATTTTCGATTCTCAAAAGAG 58.767 33.333 0.00 0.00 31.75 2.85
843 852 7.483059 GCAGTAATTTTCGATTCTCAAAAGAGG 59.517 37.037 0.00 0.00 31.75 3.69
848 857 7.801716 TTTTCGATTCTCAAAAGAGGAAAGA 57.198 32.000 0.00 0.00 32.99 2.52
850 859 6.787085 TCGATTCTCAAAAGAGGAAAGAAC 57.213 37.500 0.00 0.00 31.75 3.01
851 860 5.405571 TCGATTCTCAAAAGAGGAAAGAACG 59.594 40.000 0.00 0.00 31.75 3.95
852 861 5.177696 CGATTCTCAAAAGAGGAAAGAACGT 59.822 40.000 0.00 0.00 31.75 3.99
853 862 6.365247 CGATTCTCAAAAGAGGAAAGAACGTA 59.635 38.462 0.00 0.00 31.75 3.57
854 863 7.095774 CGATTCTCAAAAGAGGAAAGAACGTAA 60.096 37.037 0.00 0.00 31.75 3.18
855 864 6.839820 TCTCAAAAGAGGAAAGAACGTAAC 57.160 37.500 0.00 0.00 0.00 2.50
858 870 7.334921 TCTCAAAAGAGGAAAGAACGTAACAAA 59.665 33.333 0.00 0.00 0.00 2.83
891 903 3.428532 TGGGCCGTAGATAAGGAGATAC 58.571 50.000 0.00 0.00 0.00 2.24
892 904 2.422832 GGGCCGTAGATAAGGAGATACG 59.577 54.545 0.00 0.00 40.41 3.06
894 906 4.256920 GGCCGTAGATAAGGAGATACGTA 58.743 47.826 0.00 0.00 39.39 3.57
895 907 4.880696 GGCCGTAGATAAGGAGATACGTAT 59.119 45.833 8.05 8.05 39.39 3.06
896 908 5.356470 GGCCGTAGATAAGGAGATACGTATT 59.644 44.000 9.92 0.00 39.39 1.89
897 909 6.127786 GGCCGTAGATAAGGAGATACGTATTT 60.128 42.308 9.92 3.50 39.39 1.40
898 910 7.311408 GCCGTAGATAAGGAGATACGTATTTT 58.689 38.462 9.92 1.24 39.39 1.82
899 911 7.484324 GCCGTAGATAAGGAGATACGTATTTTC 59.516 40.741 9.92 10.46 39.39 2.29
922 934 6.308566 TCCCCTCTAAAAATCGGAAAAGAAA 58.691 36.000 0.00 0.00 0.00 2.52
942 954 7.555306 AGAAAAGAAGATTTTATACGCCCTC 57.445 36.000 0.00 0.00 0.00 4.30
972 985 2.434185 CAGCCGCCGTGAAAGCTA 60.434 61.111 0.00 0.00 33.33 3.32
1022 1039 4.717629 CCAACTCCGAGCGCGTGA 62.718 66.667 8.43 5.01 35.23 4.35
1051 1068 1.908793 CTCGTCCACTCACCACCCT 60.909 63.158 0.00 0.00 0.00 4.34
1063 1080 3.775654 CACCCTGTCTCCCCGCTC 61.776 72.222 0.00 0.00 0.00 5.03
1126 1152 1.003355 ACCACATCCGCTTCACCAG 60.003 57.895 0.00 0.00 0.00 4.00
1206 1232 2.735444 CGTCAAGGCAGCGAAGAAGATA 60.735 50.000 0.00 0.00 0.00 1.98
1215 1241 2.366916 AGCGAAGAAGATATCCCACCTG 59.633 50.000 0.00 0.00 0.00 4.00
1416 1443 4.598894 CTCATCCCGCTCGCCCTG 62.599 72.222 0.00 0.00 0.00 4.45
1571 1598 2.066393 CGAATCTGGCCCTCCTCCA 61.066 63.158 0.00 0.00 0.00 3.86
1593 1620 0.983378 AATGCGGGCTAAGTCCCTCT 60.983 55.000 0.00 0.00 44.30 3.69
1731 1758 1.009675 GCTTGTGGCGTTCACTGTG 60.010 57.895 0.17 0.17 46.20 3.66
1737 1764 1.595382 GGCGTTCACTGTGCAGAGT 60.595 57.895 11.36 11.36 0.00 3.24
1794 1821 2.113139 CTTGGTTGGTCGCAGGGT 59.887 61.111 0.00 0.00 0.00 4.34
1917 1944 7.795047 TGGAGATATCTTACATTGCTCAAAGA 58.205 34.615 6.70 0.00 32.85 2.52
2031 2058 2.121291 TTGATTACAATGCCGCCTCA 57.879 45.000 0.00 0.00 0.00 3.86
2112 2139 3.119388 GCCTTGCTGATGTTTATGCTTCA 60.119 43.478 0.00 0.00 0.00 3.02
2133 2160 0.875059 GCTGTGCTGGGAAACTACAC 59.125 55.000 0.00 0.00 0.00 2.90
2198 2225 1.645710 CTTACCTGTCCTGGGTGAGT 58.354 55.000 0.00 0.00 36.23 3.41
2247 2287 1.044790 CATCCCCCTTGGTCCATTGC 61.045 60.000 0.00 0.00 34.77 3.56
2271 2311 4.107622 CAAGTTCTGTGCAGTTTTTCTGG 58.892 43.478 0.00 0.00 43.78 3.86
2320 2360 5.047802 ACTGATGAAAAAGCATGGTTACAGG 60.048 40.000 11.15 8.62 0.00 4.00
2343 2383 7.500227 CAGGTTATCATCTTGCCAGAAATAGAA 59.500 37.037 0.00 0.00 30.76 2.10
2377 2417 7.342541 TGAAATTTCTGGGAATGATCATGCTTA 59.657 33.333 18.64 2.36 0.00 3.09
2390 2430 4.952262 TCATGCTTAACTTCATCTGCAC 57.048 40.909 0.00 0.00 33.16 4.57
2392 2432 5.005740 TCATGCTTAACTTCATCTGCACTT 58.994 37.500 0.00 0.00 33.16 3.16
2422 2462 1.039856 TTTCTTGGGCTTTCACTGGC 58.960 50.000 0.00 0.00 0.00 4.85
2427 2467 0.680618 TGGGCTTTCACTGGCAAATG 59.319 50.000 0.00 0.00 0.00 2.32
2438 2478 6.343716 TCACTGGCAAATGATTGTGTATTT 57.656 33.333 0.00 0.00 38.85 1.40
2491 2648 9.415544 GATTCTAAATGGTTGCATATGGATTTC 57.584 33.333 4.56 0.00 0.00 2.17
2502 2659 7.332213 TGCATATGGATTTCGATTTTCTCAA 57.668 32.000 4.56 0.00 0.00 3.02
2513 2670 5.633927 TCGATTTTCTCAAAGACATGCATG 58.366 37.500 25.09 25.09 0.00 4.06
2555 2712 0.764890 AGGTGTTGGCTTCAGCTGTA 59.235 50.000 14.67 2.58 41.19 2.74
2556 2713 1.142870 AGGTGTTGGCTTCAGCTGTAA 59.857 47.619 14.67 6.04 41.19 2.41
2614 2771 5.506649 GCTTTCCACGAACCAAGTTGAAATA 60.507 40.000 3.87 0.00 34.31 1.40
2702 2861 8.921353 ATGGAATGATTTTTGAAAATGGTGAA 57.079 26.923 6.44 0.00 38.64 3.18
2710 2869 8.674263 ATTTTTGAAAATGGTGAAGTGCAATA 57.326 26.923 1.14 0.00 37.24 1.90
2770 2929 7.044798 GGCAATAGTAGAATGAGAGAACTTGT 58.955 38.462 0.00 0.00 0.00 3.16
2803 2962 4.047627 AGTGTTTAAGCCATTAAGCCCT 57.952 40.909 0.00 0.00 32.73 5.19
2804 2963 4.416516 AGTGTTTAAGCCATTAAGCCCTT 58.583 39.130 0.00 0.00 32.73 3.95
2805 2964 4.838423 AGTGTTTAAGCCATTAAGCCCTTT 59.162 37.500 0.00 0.00 32.73 3.11
2806 2965 5.306937 AGTGTTTAAGCCATTAAGCCCTTTT 59.693 36.000 0.00 0.00 32.73 2.27
2807 2966 5.637810 GTGTTTAAGCCATTAAGCCCTTTTC 59.362 40.000 0.00 0.00 32.73 2.29
2808 2967 4.712122 TTAAGCCATTAAGCCCTTTTCG 57.288 40.909 0.00 0.00 0.00 3.46
2809 2968 2.215942 AGCCATTAAGCCCTTTTCGT 57.784 45.000 0.00 0.00 0.00 3.85
2810 2969 3.359695 AGCCATTAAGCCCTTTTCGTA 57.640 42.857 0.00 0.00 0.00 3.43
2811 2970 3.898482 AGCCATTAAGCCCTTTTCGTAT 58.102 40.909 0.00 0.00 0.00 3.06
2814 2973 4.097286 GCCATTAAGCCCTTTTCGTATTGA 59.903 41.667 0.00 0.00 0.00 2.57
2816 2975 6.016610 GCCATTAAGCCCTTTTCGTATTGATA 60.017 38.462 0.00 0.00 0.00 2.15
2817 2976 7.469456 GCCATTAAGCCCTTTTCGTATTGATAA 60.469 37.037 0.00 0.00 0.00 1.75
2818 2977 7.860872 CCATTAAGCCCTTTTCGTATTGATAAC 59.139 37.037 0.00 0.00 0.00 1.89
2820 2979 9.841295 ATTAAGCCCTTTTCGTATTGATAACTA 57.159 29.630 0.00 0.00 0.00 2.24
2821 2980 9.841295 TTAAGCCCTTTTCGTATTGATAACTAT 57.159 29.630 0.00 0.00 0.00 2.12
2822 2981 7.964604 AGCCCTTTTCGTATTGATAACTATC 57.035 36.000 0.00 0.00 0.00 2.08
2823 2982 6.935208 AGCCCTTTTCGTATTGATAACTATCC 59.065 38.462 0.00 0.00 31.71 2.59
2825 2984 7.450903 CCCTTTTCGTATTGATAACTATCCCT 58.549 38.462 0.00 0.00 31.71 4.20
2858 3795 2.473576 AGTATCCCTTTCGCTACCCT 57.526 50.000 0.00 0.00 0.00 4.34
2865 3802 1.003839 TTTCGCTACCCTGCACTGG 60.004 57.895 0.00 0.00 0.00 4.00
2872 3809 2.418334 GCTACCCTGCACTGGTAAGTAC 60.418 54.545 10.72 0.00 37.88 2.73
2886 3823 6.770785 ACTGGTAAGTACTGCAAAATGAAGAA 59.229 34.615 0.00 0.00 33.79 2.52
2887 3824 7.284489 ACTGGTAAGTACTGCAAAATGAAGAAA 59.716 33.333 0.00 0.00 33.79 2.52
2937 3874 1.365293 AAACTAAGGGCGTAAGGGGT 58.635 50.000 0.00 0.00 38.28 4.95
2939 3876 1.269703 ACTAAGGGCGTAAGGGGTGG 61.270 60.000 0.00 0.00 38.28 4.61
2947 3884 2.560105 GGCGTAAGGGGTGGTATACTAG 59.440 54.545 2.25 0.00 38.28 2.57
3013 3951 1.880027 CGGTTTGCCTAGTTTCAGCTT 59.120 47.619 0.00 0.00 0.00 3.74
3014 3952 2.095718 CGGTTTGCCTAGTTTCAGCTTC 60.096 50.000 0.00 0.00 0.00 3.86
3017 3955 4.038042 GGTTTGCCTAGTTTCAGCTTCTTT 59.962 41.667 0.00 0.00 0.00 2.52
3023 3961 3.655276 AGTTTCAGCTTCTTTGCATGG 57.345 42.857 0.00 0.00 34.99 3.66
3028 3966 4.247267 TCAGCTTCTTTGCATGGAAAAG 57.753 40.909 13.69 10.00 36.22 2.27
3038 3976 7.215789 TCTTTGCATGGAAAAGCTAAATTTCA 58.784 30.769 13.69 1.76 38.29 2.69
3041 3979 5.160641 GCATGGAAAAGCTAAATTTCACGA 58.839 37.500 10.67 0.00 38.29 4.35
3053 3991 7.023575 GCTAAATTTCACGACAGATGAATGTT 58.976 34.615 0.00 0.00 36.02 2.71
3057 3995 6.618287 TTTCACGACAGATGAATGTTTTCT 57.382 33.333 0.00 0.00 36.02 2.52
3065 4003 6.070656 ACAGATGAATGTTTTCTCCAGGAAA 58.929 36.000 0.00 0.00 41.58 3.13
3078 4016 6.509523 TCTCCAGGAAAGGTTTTCTAGAAA 57.490 37.500 13.99 13.99 0.00 2.52
3159 4110 5.485353 TGATTATCTGGAGGCCAGGTTATAG 59.515 44.000 5.01 0.00 43.31 1.31
3255 4206 9.988350 CATCTTCAATACTTATTGCTAAACGTT 57.012 29.630 0.00 0.00 42.06 3.99
3267 4218 9.575783 TTATTGCTAAACGTTTTCTTGAAAACT 57.424 25.926 26.22 15.98 39.74 2.66
3270 4221 8.967552 TGCTAAACGTTTTCTTGAAAACTAAA 57.032 26.923 26.22 14.06 39.74 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.081406 AGCAATGCCTCACTATTGTTTCA 58.919 39.130 0.00 0.00 36.81 2.69
47 48 3.706086 TCAGTATGAGCAATGCCTCACTA 59.294 43.478 0.00 0.00 42.56 2.74
71 73 8.869109 AGAGGAAGAAGGAAGAGTTATATGATG 58.131 37.037 0.00 0.00 0.00 3.07
151 153 2.301583 GGGGCTATTTGAGAGCTAGAGG 59.698 54.545 0.00 0.00 39.98 3.69
201 203 4.558538 AGCACAACAGATTGACAAGAAC 57.441 40.909 0.00 0.00 39.30 3.01
300 304 1.004044 ACAAGAGGCTGGATGAGGTTG 59.996 52.381 0.00 0.00 0.00 3.77
311 315 1.072965 CTTTGAGGGTCACAAGAGGCT 59.927 52.381 0.00 0.00 0.00 4.58
317 321 1.211703 TGCTGACTTTGAGGGTCACAA 59.788 47.619 0.00 0.00 38.57 3.33
323 327 5.352569 CAGTTATACTTGCTGACTTTGAGGG 59.647 44.000 0.00 0.00 32.39 4.30
396 400 2.548067 GCAGAGTTCGAGACCCAAAGAA 60.548 50.000 0.00 0.00 0.00 2.52
451 455 1.203635 TGGGGGAATTCAAGGGGTCTA 60.204 52.381 7.93 0.00 0.00 2.59
462 466 0.912487 TCAGCCTACGTGGGGGAATT 60.912 55.000 20.55 0.00 36.00 2.17
474 478 1.079127 GCCAACGCTCTTCAGCCTA 60.079 57.895 0.00 0.00 43.56 3.93
590 598 1.245732 GGCATGATGATGAAGAGGCC 58.754 55.000 0.00 0.00 0.00 5.19
602 610 1.004745 ACTCGGGAAACTTGGCATGAT 59.995 47.619 7.45 0.00 0.00 2.45
603 611 0.400213 ACTCGGGAAACTTGGCATGA 59.600 50.000 7.45 0.00 0.00 3.07
604 612 0.523072 CACTCGGGAAACTTGGCATG 59.477 55.000 0.00 0.00 0.00 4.06
695 704 1.519751 CTCCGACGAGGGATGGCTAG 61.520 65.000 0.00 0.00 41.52 3.42
732 741 2.602322 GCAGCTGCCCGATTCGATC 61.602 63.158 28.76 0.00 34.31 3.69
733 742 2.590007 GCAGCTGCCCGATTCGAT 60.590 61.111 28.76 0.00 34.31 3.59
743 752 3.426568 GACCTTGACGGCAGCTGC 61.427 66.667 30.88 30.88 41.14 5.25
744 753 2.743928 GGACCTTGACGGCAGCTG 60.744 66.667 10.11 10.11 35.61 4.24
745 754 3.241530 TGGACCTTGACGGCAGCT 61.242 61.111 0.00 0.00 35.61 4.24
746 755 3.050275 GTGGACCTTGACGGCAGC 61.050 66.667 0.00 0.00 35.61 5.25
747 756 2.358737 GGTGGACCTTGACGGCAG 60.359 66.667 0.00 0.00 35.61 4.85
748 757 4.308458 CGGTGGACCTTGACGGCA 62.308 66.667 0.00 0.00 35.61 5.69
751 760 3.851845 TTCGCGGTGGACCTTGACG 62.852 63.158 6.13 0.00 0.00 4.35
752 761 1.595929 TTTCGCGGTGGACCTTGAC 60.596 57.895 6.13 0.00 0.00 3.18
753 762 1.595929 GTTTCGCGGTGGACCTTGA 60.596 57.895 6.13 0.00 0.00 3.02
754 763 2.613506 GGTTTCGCGGTGGACCTTG 61.614 63.158 6.13 0.00 0.00 3.61
755 764 2.281276 GGTTTCGCGGTGGACCTT 60.281 61.111 6.13 0.00 0.00 3.50
756 765 1.546589 TATGGTTTCGCGGTGGACCT 61.547 55.000 6.13 2.95 33.33 3.85
757 766 0.674269 TTATGGTTTCGCGGTGGACC 60.674 55.000 6.13 10.09 0.00 4.46
758 767 1.329599 GATTATGGTTTCGCGGTGGAC 59.670 52.381 6.13 0.00 0.00 4.02
759 768 1.658994 GATTATGGTTTCGCGGTGGA 58.341 50.000 6.13 0.00 0.00 4.02
760 769 0.303493 CGATTATGGTTTCGCGGTGG 59.697 55.000 6.13 0.00 0.00 4.61
761 770 3.798506 CGATTATGGTTTCGCGGTG 57.201 52.632 6.13 0.00 0.00 4.94
766 775 0.111704 CTCGCGCGATTATGGTTTCG 60.112 55.000 34.86 13.69 38.37 3.46
767 776 0.232303 CCTCGCGCGATTATGGTTTC 59.768 55.000 34.86 0.00 0.00 2.78
768 777 1.772063 GCCTCGCGCGATTATGGTTT 61.772 55.000 34.86 0.00 0.00 3.27
769 778 2.244651 GCCTCGCGCGATTATGGTT 61.245 57.895 34.86 0.00 0.00 3.67
770 779 2.661866 GCCTCGCGCGATTATGGT 60.662 61.111 34.86 0.00 0.00 3.55
781 790 1.264826 TGAAACCTAAAAACGCCTCGC 59.735 47.619 0.00 0.00 0.00 5.03
782 791 3.249080 TCTTGAAACCTAAAAACGCCTCG 59.751 43.478 0.00 0.00 0.00 4.63
783 792 4.320275 CCTCTTGAAACCTAAAAACGCCTC 60.320 45.833 0.00 0.00 0.00 4.70
784 793 3.568430 CCTCTTGAAACCTAAAAACGCCT 59.432 43.478 0.00 0.00 0.00 5.52
785 794 3.566742 TCCTCTTGAAACCTAAAAACGCC 59.433 43.478 0.00 0.00 0.00 5.68
786 795 4.823790 TCCTCTTGAAACCTAAAAACGC 57.176 40.909 0.00 0.00 0.00 4.84
787 796 7.758076 AGTTTTTCCTCTTGAAACCTAAAAACG 59.242 33.333 0.00 0.00 44.20 3.60
788 797 8.869897 CAGTTTTTCCTCTTGAAACCTAAAAAC 58.130 33.333 0.00 0.00 42.56 2.43
789 798 8.590204 ACAGTTTTTCCTCTTGAAACCTAAAAA 58.410 29.630 0.00 0.00 42.56 1.94
790 799 8.129496 ACAGTTTTTCCTCTTGAAACCTAAAA 57.871 30.769 0.00 0.00 42.56 1.52
791 800 7.712204 ACAGTTTTTCCTCTTGAAACCTAAA 57.288 32.000 0.00 0.00 42.56 1.85
792 801 7.012989 GCTACAGTTTTTCCTCTTGAAACCTAA 59.987 37.037 0.00 0.00 42.56 2.69
793 802 6.485648 GCTACAGTTTTTCCTCTTGAAACCTA 59.514 38.462 0.00 0.00 42.56 3.08
794 803 5.299531 GCTACAGTTTTTCCTCTTGAAACCT 59.700 40.000 0.00 0.00 42.56 3.50
795 804 5.067283 TGCTACAGTTTTTCCTCTTGAAACC 59.933 40.000 0.00 0.00 42.56 3.27
796 805 6.131544 TGCTACAGTTTTTCCTCTTGAAAC 57.868 37.500 0.00 0.00 42.56 2.78
797 806 5.885912 ACTGCTACAGTTTTTCCTCTTGAAA 59.114 36.000 0.00 0.00 42.59 2.69
798 807 5.437060 ACTGCTACAGTTTTTCCTCTTGAA 58.563 37.500 0.00 0.00 42.59 2.69
799 808 5.036117 ACTGCTACAGTTTTTCCTCTTGA 57.964 39.130 0.00 0.00 42.59 3.02
800 809 6.861065 TTACTGCTACAGTTTTTCCTCTTG 57.139 37.500 5.44 0.00 42.59 3.02
801 810 8.465273 AAATTACTGCTACAGTTTTTCCTCTT 57.535 30.769 5.44 0.00 42.59 2.85
802 811 8.465273 AAAATTACTGCTACAGTTTTTCCTCT 57.535 30.769 5.44 0.00 42.59 3.69
803 812 7.534239 CGAAAATTACTGCTACAGTTTTTCCTC 59.466 37.037 20.87 11.21 42.59 3.71
804 813 7.227910 TCGAAAATTACTGCTACAGTTTTTCCT 59.772 33.333 20.87 6.16 42.59 3.36
805 814 7.357303 TCGAAAATTACTGCTACAGTTTTTCC 58.643 34.615 20.87 10.99 42.59 3.13
806 815 8.950403 ATCGAAAATTACTGCTACAGTTTTTC 57.050 30.769 18.78 18.78 42.59 2.29
807 816 9.394477 GAATCGAAAATTACTGCTACAGTTTTT 57.606 29.630 5.44 7.56 42.59 1.94
808 817 8.784043 AGAATCGAAAATTACTGCTACAGTTTT 58.216 29.630 5.44 0.84 42.59 2.43
809 818 8.324163 AGAATCGAAAATTACTGCTACAGTTT 57.676 30.769 5.44 0.00 42.59 2.66
810 819 7.602644 TGAGAATCGAAAATTACTGCTACAGTT 59.397 33.333 5.44 0.00 39.01 3.16
811 820 7.097192 TGAGAATCGAAAATTACTGCTACAGT 58.903 34.615 5.46 5.46 43.03 3.55
812 821 7.525688 TGAGAATCGAAAATTACTGCTACAG 57.474 36.000 0.00 0.00 38.61 2.74
813 822 7.899178 TTGAGAATCGAAAATTACTGCTACA 57.101 32.000 0.00 0.00 38.61 2.74
865 877 0.318762 CTTATCTACGGCCCAGGAGC 59.681 60.000 0.00 0.00 0.00 4.70
891 903 5.818857 TCCGATTTTTAGAGGGGAAAATACG 59.181 40.000 0.00 0.00 36.04 3.06
892 904 7.634671 TTCCGATTTTTAGAGGGGAAAATAC 57.365 36.000 0.00 0.00 36.04 1.89
894 906 7.453439 TCTTTTCCGATTTTTAGAGGGGAAAAT 59.547 33.333 14.08 0.00 46.45 1.82
895 907 6.778559 TCTTTTCCGATTTTTAGAGGGGAAAA 59.221 34.615 13.30 13.30 45.88 2.29
896 908 6.308566 TCTTTTCCGATTTTTAGAGGGGAAA 58.691 36.000 0.00 0.00 40.64 3.13
897 909 5.883180 TCTTTTCCGATTTTTAGAGGGGAA 58.117 37.500 0.00 0.00 0.00 3.97
898 910 5.508280 TCTTTTCCGATTTTTAGAGGGGA 57.492 39.130 0.00 0.00 0.00 4.81
899 911 6.584185 TTTCTTTTCCGATTTTTAGAGGGG 57.416 37.500 0.00 0.00 0.00 4.79
934 946 2.242882 GGGGGATAATAGAGGGCGTA 57.757 55.000 0.00 0.00 0.00 4.42
1022 1039 1.203075 AGTGGACGAGGAAAGAGAGGT 60.203 52.381 0.00 0.00 0.00 3.85
1206 1232 0.419459 AGGAGGACTTCAGGTGGGAT 59.581 55.000 0.00 0.00 0.00 3.85
1215 1241 1.518302 GGGCTTCGAGGAGGACTTC 59.482 63.158 0.00 0.00 0.00 3.01
1350 1377 1.680651 CTCCCTCAGCTCGGTGACT 60.681 63.158 0.00 0.00 0.00 3.41
1571 1598 1.452108 GGACTTAGCCCGCATTGCT 60.452 57.895 7.12 0.00 42.81 3.91
1593 1620 0.541998 TGAAGGGCTCCGAGAAGACA 60.542 55.000 0.00 0.00 0.00 3.41
1722 1749 0.946221 CCGGACTCTGCACAGTGAAC 60.946 60.000 4.15 0.00 0.00 3.18
1728 1755 1.967535 CTTCTCCGGACTCTGCACA 59.032 57.895 0.00 0.00 0.00 4.57
1731 1758 1.140804 GAGCTTCTCCGGACTCTGC 59.859 63.158 0.00 2.67 0.00 4.26
1770 1797 2.027625 CGACCAACCAAGCGTCTCC 61.028 63.158 0.00 0.00 0.00 3.71
1794 1821 0.609662 TCACAGCTAGCAGCACATCA 59.390 50.000 18.83 0.00 45.56 3.07
1917 1944 1.137086 CTATACTTGAGCAGCACCGGT 59.863 52.381 0.00 0.00 0.00 5.28
2031 2058 4.372656 CAAGAAACTTCTTCTCGGACAGT 58.627 43.478 1.64 0.00 45.23 3.55
2082 2109 1.379576 ATCAGCAAGGCCTGGAAGC 60.380 57.895 12.85 11.55 33.64 3.86
2112 2139 1.142870 TGTAGTTTCCCAGCACAGCTT 59.857 47.619 0.00 0.00 36.40 3.74
2133 2160 4.569966 GTGTTCTCTGATAGCAACTCCATG 59.430 45.833 0.00 0.00 0.00 3.66
2182 2209 0.544595 GGTACTCACCCAGGACAGGT 60.545 60.000 0.00 0.00 37.78 4.00
2215 2255 2.719705 AGGGGGATGACAAACCTTAACA 59.280 45.455 2.81 0.00 0.00 2.41
2247 2287 5.032863 CAGAAAAACTGCACAGAACTTGAG 58.967 41.667 4.31 0.00 39.86 3.02
2302 2342 6.919721 TGATAACCTGTAACCATGCTTTTTC 58.080 36.000 0.00 0.00 0.00 2.29
2320 2360 7.011482 ACGTTCTATTTCTGGCAAGATGATAAC 59.989 37.037 0.00 0.00 30.72 1.89
2343 2383 6.432783 TCATTCCCAGAAATTTCATTACACGT 59.567 34.615 19.99 0.00 0.00 4.49
2377 2417 6.655078 ATAAAACCAAGTGCAGATGAAGTT 57.345 33.333 0.00 0.00 0.00 2.66
2390 2430 5.610398 AGCCCAAGAAACAATAAAACCAAG 58.390 37.500 0.00 0.00 0.00 3.61
2392 2432 5.622346 AAGCCCAAGAAACAATAAAACCA 57.378 34.783 0.00 0.00 0.00 3.67
2422 2462 9.577110 AGTTGCATCTAAATACACAATCATTTG 57.423 29.630 0.00 0.00 38.86 2.32
2483 2640 7.452880 TGTCTTTGAGAAAATCGAAATCCAT 57.547 32.000 0.00 0.00 30.60 3.41
2491 2648 5.285370 CACATGCATGTCTTTGAGAAAATCG 59.715 40.000 29.23 9.32 39.39 3.34
2502 2659 6.822667 TCTAAATGTTCACATGCATGTCTT 57.177 33.333 29.23 13.55 39.39 3.01
2599 2756 8.523658 AGGCTCTAAATTATTTCAACTTGGTTC 58.476 33.333 0.00 0.00 0.00 3.62
2702 2861 9.236006 ACTATCTCTTCAAAACAATATTGCACT 57.764 29.630 15.48 0.00 0.00 4.40
2735 2894 8.250143 TCATTCTACTATTGCCACATCTAGAA 57.750 34.615 0.00 0.00 0.00 2.10
2739 2898 6.552725 TCTCTCATTCTACTATTGCCACATCT 59.447 38.462 0.00 0.00 0.00 2.90
2744 2903 6.798427 AGTTCTCTCATTCTACTATTGCCA 57.202 37.500 0.00 0.00 0.00 4.92
2788 2947 3.692690 ACGAAAAGGGCTTAATGGCTTA 58.307 40.909 0.00 0.00 41.48 3.09
2795 2954 9.841295 ATAGTTATCAATACGAAAAGGGCTTAA 57.159 29.630 0.00 0.00 0.00 1.85
2830 2989 9.933723 GGTAGCGAAAGGGATACTTATATAAAA 57.066 33.333 0.00 0.00 38.85 1.52
2832 2991 7.897565 AGGGTAGCGAAAGGGATACTTATATAA 59.102 37.037 0.00 0.00 38.85 0.98
2833 2992 7.341256 CAGGGTAGCGAAAGGGATACTTATATA 59.659 40.741 0.00 0.00 38.85 0.86
2836 2995 4.283722 CAGGGTAGCGAAAGGGATACTTAT 59.716 45.833 0.00 0.00 38.85 1.73
2837 2996 3.640029 CAGGGTAGCGAAAGGGATACTTA 59.360 47.826 0.00 0.00 38.85 2.24
2838 2997 2.434702 CAGGGTAGCGAAAGGGATACTT 59.565 50.000 0.00 0.00 42.52 2.24
2839 2998 2.040178 CAGGGTAGCGAAAGGGATACT 58.960 52.381 0.00 0.00 0.00 2.12
2840 2999 1.540580 GCAGGGTAGCGAAAGGGATAC 60.541 57.143 0.00 0.00 0.00 2.24
2841 3000 0.756903 GCAGGGTAGCGAAAGGGATA 59.243 55.000 0.00 0.00 0.00 2.59
2842 3001 1.271840 TGCAGGGTAGCGAAAGGGAT 61.272 55.000 0.00 0.00 37.31 3.85
2844 3003 1.745489 GTGCAGGGTAGCGAAAGGG 60.745 63.158 0.00 0.00 37.31 3.95
2845 3004 1.021390 CAGTGCAGGGTAGCGAAAGG 61.021 60.000 0.00 0.00 37.31 3.11
2846 3005 1.021390 CCAGTGCAGGGTAGCGAAAG 61.021 60.000 0.00 0.00 37.31 2.62
2847 3006 1.003839 CCAGTGCAGGGTAGCGAAA 60.004 57.895 0.00 0.00 37.31 3.46
2848 3007 0.901114 TACCAGTGCAGGGTAGCGAA 60.901 55.000 12.11 0.00 39.85 4.70
2849 3008 0.901114 TTACCAGTGCAGGGTAGCGA 60.901 55.000 14.87 1.44 41.64 4.93
2850 3009 0.460284 CTTACCAGTGCAGGGTAGCG 60.460 60.000 14.87 8.60 41.64 4.26
2851 3010 0.613777 ACTTACCAGTGCAGGGTAGC 59.386 55.000 14.87 0.00 41.64 3.58
2853 3012 2.829720 CAGTACTTACCAGTGCAGGGTA 59.170 50.000 12.11 12.11 38.07 3.69
2854 3013 1.623811 CAGTACTTACCAGTGCAGGGT 59.376 52.381 14.01 14.01 38.07 4.34
2865 3802 9.334693 CTCATTTCTTCATTTTGCAGTACTTAC 57.665 33.333 0.00 0.00 0.00 2.34
2872 3809 6.237490 GCGAATCTCATTTCTTCATTTTGCAG 60.237 38.462 0.00 0.00 0.00 4.41
2886 3823 6.013379 TGAATATAAGGGGAGCGAATCTCATT 60.013 38.462 0.00 0.00 43.70 2.57
2887 3824 5.485353 TGAATATAAGGGGAGCGAATCTCAT 59.515 40.000 0.00 0.00 43.70 2.90
2928 3865 5.537674 ACAATCTAGTATACCACCCCTTACG 59.462 44.000 0.00 0.00 0.00 3.18
3013 3951 7.171337 GTGAAATTTAGCTTTTCCATGCAAAGA 59.829 33.333 16.10 0.00 33.69 2.52
3014 3952 7.293018 GTGAAATTTAGCTTTTCCATGCAAAG 58.707 34.615 6.86 10.03 33.15 2.77
3017 3955 4.922692 CGTGAAATTTAGCTTTTCCATGCA 59.077 37.500 6.86 0.00 33.15 3.96
3023 3961 7.298122 TCATCTGTCGTGAAATTTAGCTTTTC 58.702 34.615 0.00 0.00 34.40 2.29
3028 3966 6.546395 ACATTCATCTGTCGTGAAATTTAGC 58.454 36.000 0.00 0.00 38.89 3.09
3038 3976 4.641396 TGGAGAAAACATTCATCTGTCGT 58.359 39.130 0.00 0.00 0.00 4.34
3041 3979 5.246981 TCCTGGAGAAAACATTCATCTGT 57.753 39.130 0.00 0.00 0.00 3.41
3053 3991 6.509523 TCTAGAAAACCTTTCCTGGAGAAA 57.490 37.500 0.00 0.00 42.28 2.52
3057 3995 6.062095 CAGTTTCTAGAAAACCTTTCCTGGA 58.938 40.000 19.30 0.00 31.33 3.86
3065 4003 5.828328 CAGGTTTCCAGTTTCTAGAAAACCT 59.172 40.000 22.85 22.85 37.83 3.50
3154 4105 6.538742 GCCACTCACTTGCTGTTAATCTATAA 59.461 38.462 0.00 0.00 0.00 0.98
3159 4110 2.162408 GGCCACTCACTTGCTGTTAATC 59.838 50.000 0.00 0.00 0.00 1.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.