Multiple sequence alignment - TraesCS7B01G087500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G087500 chr7B 100.000 3185 0 0 1 3185 102268092 102264908 0.000000e+00 5882.0
1 TraesCS7B01G087500 chr7B 91.466 1289 98 6 909 2188 102649419 102648134 0.000000e+00 1760.0
2 TraesCS7B01G087500 chr7B 97.561 328 8 0 2858 3185 104063952 104064279 2.150000e-156 562.0
3 TraesCS7B01G087500 chr7B 87.535 353 44 0 562 914 102668442 102668090 2.960000e-110 409.0
4 TraesCS7B01G087500 chr7A 90.199 2418 148 27 515 2861 137781246 137778847 0.000000e+00 3070.0
5 TraesCS7B01G087500 chr7D 92.491 1758 90 12 936 2658 137571149 137569399 0.000000e+00 2477.0
6 TraesCS7B01G087500 chr7D 93.060 951 54 3 985 1935 137764434 137763496 0.000000e+00 1380.0
7 TraesCS7B01G087500 chr7D 96.475 539 18 1 939 1477 137608029 137607492 0.000000e+00 889.0
8 TraesCS7B01G087500 chr7D 90.664 482 41 3 508 988 137767327 137766849 3.460000e-179 638.0
9 TraesCS7B01G087500 chr7D 88.435 294 33 1 648 941 137571566 137571274 1.410000e-93 353.0
10 TraesCS7B01G087500 chr7D 88.716 257 28 1 1932 2188 137717169 137716914 2.390000e-81 313.0
11 TraesCS7B01G087500 chr7D 85.345 232 13 6 508 718 137610172 137609941 1.490000e-53 220.0
12 TraesCS7B01G087500 chr7D 82.734 278 14 7 2617 2861 137569403 137569127 1.920000e-52 217.0
13 TraesCS7B01G087500 chr7D 80.420 286 40 10 509 780 186395142 186395425 1.500000e-48 204.0
14 TraesCS7B01G087500 chrUn 91.336 681 59 0 1471 2151 468058903 468059583 0.000000e+00 931.0
15 TraesCS7B01G087500 chrUn 96.104 539 20 1 939 1477 91673654 91673117 0.000000e+00 878.0
16 TraesCS7B01G087500 chrUn 86.141 368 30 6 508 854 91676372 91676005 8.340000e-101 377.0
17 TraesCS7B01G087500 chrUn 85.714 371 32 6 505 854 441249830 441250200 3.880000e-99 372.0
18 TraesCS7B01G087500 chrUn 98.529 68 1 0 853 920 441250264 441250331 1.550000e-23 121.0
19 TraesCS7B01G087500 chrUn 97.059 68 2 0 853 920 91675941 91675874 7.220000e-22 115.0
20 TraesCS7B01G087500 chr3B 96.035 454 15 1 1 454 526807263 526806813 0.000000e+00 736.0
21 TraesCS7B01G087500 chr3B 99.387 326 2 0 2860 3185 773757353 773757028 2.740000e-165 592.0
22 TraesCS7B01G087500 chr3B 98.769 325 4 0 2861 3185 756376894 756377218 2.130000e-161 579.0
23 TraesCS7B01G087500 chr3B 97.846 325 7 0 2861 3185 820899645 820899969 2.150000e-156 562.0
24 TraesCS7B01G087500 chr4B 98.452 323 5 0 2863 3185 598601175 598600853 1.280000e-158 569.0
25 TraesCS7B01G087500 chr1B 97.879 330 6 1 2857 3185 515328683 515328354 1.280000e-158 569.0
26 TraesCS7B01G087500 chr1B 97.859 327 7 0 2859 3185 564786387 564786713 1.660000e-157 566.0
27 TraesCS7B01G087500 chr1B 97.846 325 7 0 2861 3185 625054939 625054615 2.150000e-156 562.0
28 TraesCS7B01G087500 chr4A 97.846 325 7 0 2861 3185 138260991 138260667 2.150000e-156 562.0
29 TraesCS7B01G087500 chr3D 81.733 531 44 19 1 506 319052961 319053463 8.280000e-106 394.0
30 TraesCS7B01G087500 chr5D 94.064 219 13 0 1 219 73812765 73812983 1.830000e-87 333.0
31 TraesCS7B01G087500 chr5D 90.310 258 10 1 263 505 73812988 73813245 1.100000e-84 324.0
32 TraesCS7B01G087500 chr4D 77.368 380 75 8 1122 1497 78431903 78431531 6.920000e-52 215.0
33 TraesCS7B01G087500 chr3A 86.466 133 14 4 321 451 454289356 454289486 3.310000e-30 143.0
34 TraesCS7B01G087500 chr3A 81.197 117 22 0 508 624 616275471 616275355 9.410000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G087500 chr7B 102264908 102268092 3184 True 5882.000000 5882 100.000000 1 3185 1 chr7B.!!$R1 3184
1 TraesCS7B01G087500 chr7B 102648134 102649419 1285 True 1760.000000 1760 91.466000 909 2188 1 chr7B.!!$R2 1279
2 TraesCS7B01G087500 chr7A 137778847 137781246 2399 True 3070.000000 3070 90.199000 515 2861 1 chr7A.!!$R1 2346
3 TraesCS7B01G087500 chr7D 137569127 137571566 2439 True 1015.666667 2477 87.886667 648 2861 3 chr7D.!!$R2 2213
4 TraesCS7B01G087500 chr7D 137763496 137767327 3831 True 1009.000000 1380 91.862000 508 1935 2 chr7D.!!$R4 1427
5 TraesCS7B01G087500 chr7D 137607492 137610172 2680 True 554.500000 889 90.910000 508 1477 2 chr7D.!!$R3 969
6 TraesCS7B01G087500 chrUn 468058903 468059583 680 False 931.000000 931 91.336000 1471 2151 1 chrUn.!!$F1 680
7 TraesCS7B01G087500 chrUn 91673117 91676372 3255 True 456.666667 878 93.101333 508 1477 3 chrUn.!!$R1 969
8 TraesCS7B01G087500 chrUn 441249830 441250331 501 False 246.500000 372 92.121500 505 920 2 chrUn.!!$F2 415
9 TraesCS7B01G087500 chr3D 319052961 319053463 502 False 394.000000 394 81.733000 1 506 1 chr3D.!!$F1 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
323 332 0.035739 GGTGGGTACAGGAAAAGCGA 59.964 55.0 0.00 0.00 0.0 4.93 F
328 337 0.036294 GTACAGGAAAAGCGAGGCCT 60.036 55.0 3.86 3.86 0.0 5.19 F
473 482 0.095762 CGGTTATTTCGGTTCGGTGC 59.904 55.0 0.00 0.00 0.0 5.01 F
501 510 0.475044 TCCGTTAATATGGCCACCCC 59.525 55.0 8.16 0.00 0.0 4.95 F
502 511 0.476771 CCGTTAATATGGCCACCCCT 59.523 55.0 8.16 0.00 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1728 8048 0.385029 GCGCATACATGAATTGGCCA 59.615 50.000 0.0 0.0 0.00 5.36 R
1989 8309 0.389296 TGACAATGTACCGAGGCACG 60.389 55.000 0.0 0.0 42.18 5.34 R
2056 8376 0.805322 ATCTCGCTCGCAGAAAGCAG 60.805 55.000 0.0 0.0 46.13 4.24 R
2062 8382 1.064208 GAAGTACATCTCGCTCGCAGA 59.936 52.381 0.0 0.0 0.00 4.26 R
2451 8800 1.098050 GAGCCATCCATTTTCAGCGT 58.902 50.000 0.0 0.0 0.00 5.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.767816 TCTGTTTTCCTTTTTAGTGAGCC 57.232 39.130 0.00 0.00 0.00 4.70
47 48 3.009301 GTACGTGTCAGTACAAGCAGT 57.991 47.619 0.00 0.00 44.59 4.40
51 52 2.610479 CGTGTCAGTACAAGCAGTGGAT 60.610 50.000 0.00 0.00 37.36 3.41
57 58 2.899900 AGTACAAGCAGTGGATGAGACA 59.100 45.455 0.00 0.00 0.00 3.41
58 59 2.175878 ACAAGCAGTGGATGAGACAC 57.824 50.000 0.00 0.00 39.10 3.67
76 80 2.431057 ACACATGGCTAGCTGGTACTAC 59.569 50.000 15.72 0.00 0.00 2.73
80 84 2.829023 TGGCTAGCTGGTACTACCTTT 58.171 47.619 15.72 0.00 39.58 3.11
100 104 5.981915 CCTTTTATAGTCTTGCCTACGGTAC 59.018 44.000 0.00 0.00 0.00 3.34
108 112 4.099113 GTCTTGCCTACGGTACCTTTCTAT 59.901 45.833 10.90 0.00 0.00 1.98
115 119 2.167900 ACGGTACCTTTCTATGTGGCTC 59.832 50.000 10.90 0.00 0.00 4.70
149 153 7.299787 GTACTAAACCACAAACCACTATAGC 57.700 40.000 0.00 0.00 0.00 2.97
167 171 6.849305 ACTATAGCGCAATTAACGTATTTTGC 59.151 34.615 11.47 15.40 40.73 3.68
170 174 4.265085 AGCGCAATTAACGTATTTTGCATG 59.735 37.500 21.55 11.97 43.51 4.06
171 175 4.547966 GCGCAATTAACGTATTTTGCATGG 60.548 41.667 21.55 11.47 43.51 3.66
172 176 4.026968 CGCAATTAACGTATTTTGCATGGG 60.027 41.667 21.55 8.06 43.51 4.00
173 177 4.260172 GCAATTAACGTATTTTGCATGGGC 60.260 41.667 18.71 0.00 43.00 5.36
174 178 3.512033 TTAACGTATTTTGCATGGGCC 57.488 42.857 0.00 0.00 40.13 5.80
175 179 0.172352 AACGTATTTTGCATGGGCCG 59.828 50.000 0.00 0.00 40.13 6.13
176 180 1.065600 CGTATTTTGCATGGGCCGG 59.934 57.895 0.00 0.00 40.13 6.13
177 181 1.662438 CGTATTTTGCATGGGCCGGT 61.662 55.000 1.90 0.00 40.13 5.28
178 182 0.534873 GTATTTTGCATGGGCCGGTT 59.465 50.000 1.90 0.00 40.13 4.44
179 183 0.534412 TATTTTGCATGGGCCGGTTG 59.466 50.000 1.90 0.00 40.13 3.77
180 184 2.801483 ATTTTGCATGGGCCGGTTGC 62.801 55.000 16.36 16.36 40.13 4.17
181 185 4.992740 TTGCATGGGCCGGTTGCT 62.993 61.111 21.57 0.00 40.92 3.91
182 186 3.575703 TTGCATGGGCCGGTTGCTA 62.576 57.895 21.57 14.27 40.92 3.49
183 187 3.518068 GCATGGGCCGGTTGCTAC 61.518 66.667 16.05 0.00 40.92 3.58
184 188 2.045438 CATGGGCCGGTTGCTACA 60.045 61.111 1.90 0.00 40.92 2.74
185 189 2.114670 CATGGGCCGGTTGCTACAG 61.115 63.158 1.90 0.00 40.92 2.74
186 190 2.297895 ATGGGCCGGTTGCTACAGA 61.298 57.895 1.90 0.00 40.92 3.41
187 191 1.847798 ATGGGCCGGTTGCTACAGAA 61.848 55.000 1.90 0.00 40.92 3.02
188 192 1.077716 GGGCCGGTTGCTACAGAAT 60.078 57.895 1.90 0.00 40.92 2.40
189 193 0.179468 GGGCCGGTTGCTACAGAATA 59.821 55.000 1.90 0.00 40.92 1.75
190 194 1.296727 GGCCGGTTGCTACAGAATAC 58.703 55.000 1.90 0.00 40.92 1.89
191 195 1.134491 GGCCGGTTGCTACAGAATACT 60.134 52.381 1.90 0.00 40.92 2.12
227 231 4.471157 CGTGTACGTTGTTAAATTGGGT 57.529 40.909 0.00 0.00 34.11 4.51
228 232 4.456914 CGTGTACGTTGTTAAATTGGGTC 58.543 43.478 0.00 0.00 34.11 4.46
229 233 4.611130 CGTGTACGTTGTTAAATTGGGTCC 60.611 45.833 0.00 0.00 34.11 4.46
230 234 4.275443 GTGTACGTTGTTAAATTGGGTCCA 59.725 41.667 0.00 0.00 0.00 4.02
231 235 4.885907 TGTACGTTGTTAAATTGGGTCCAA 59.114 37.500 4.78 4.78 40.47 3.53
232 236 9.581471 CGTGTACGTTGTTAAATTGGGTCCAAT 62.581 40.741 9.28 9.28 40.18 3.16
233 237 6.713903 TGTACGTTGTTAAATTGGGTCCAATA 59.286 34.615 14.81 0.00 44.86 1.90
235 239 6.683715 ACGTTGTTAAATTGGGTCCAATAAG 58.316 36.000 14.81 4.49 44.86 1.73
237 241 7.014422 ACGTTGTTAAATTGGGTCCAATAAGAA 59.986 33.333 14.81 9.01 44.86 2.52
238 242 7.327518 CGTTGTTAAATTGGGTCCAATAAGAAC 59.672 37.037 14.81 17.10 44.86 3.01
239 243 8.364894 GTTGTTAAATTGGGTCCAATAAGAACT 58.635 33.333 19.85 4.63 44.86 3.01
240 244 8.117813 TGTTAAATTGGGTCCAATAAGAACTC 57.882 34.615 14.81 4.64 44.86 3.01
241 245 7.947890 TGTTAAATTGGGTCCAATAAGAACTCT 59.052 33.333 14.81 0.00 44.86 3.24
242 246 6.840780 AAATTGGGTCCAATAAGAACTCTG 57.159 37.500 14.81 0.00 44.86 3.35
259 268 1.398739 TCTGAGAACTTAGAGCGCTCG 59.601 52.381 30.39 19.37 34.09 5.03
261 270 0.452585 GAGAACTTAGAGCGCTCGGT 59.547 55.000 30.39 25.26 34.09 4.69
305 314 2.203252 CCATGGGCATCGACAGGG 60.203 66.667 2.85 0.00 31.76 4.45
306 315 2.591753 CATGGGCATCGACAGGGT 59.408 61.111 0.00 0.00 0.00 4.34
307 316 1.820906 CATGGGCATCGACAGGGTG 60.821 63.158 0.00 0.00 0.00 4.61
308 317 3.047807 ATGGGCATCGACAGGGTGG 62.048 63.158 0.00 0.00 0.00 4.61
309 318 4.489771 GGGCATCGACAGGGTGGG 62.490 72.222 0.00 0.00 0.00 4.61
310 319 3.717294 GGCATCGACAGGGTGGGT 61.717 66.667 0.00 0.00 0.00 4.51
311 320 2.363975 GGCATCGACAGGGTGGGTA 61.364 63.158 0.00 0.00 0.00 3.69
312 321 1.153429 GCATCGACAGGGTGGGTAC 60.153 63.158 0.00 0.00 0.00 3.34
313 322 1.895020 GCATCGACAGGGTGGGTACA 61.895 60.000 0.00 0.00 0.00 2.90
314 323 0.175760 CATCGACAGGGTGGGTACAG 59.824 60.000 0.00 0.00 0.00 2.74
315 324 0.976073 ATCGACAGGGTGGGTACAGG 60.976 60.000 0.00 0.00 0.00 4.00
316 325 1.608336 CGACAGGGTGGGTACAGGA 60.608 63.158 0.00 0.00 0.00 3.86
317 326 1.189524 CGACAGGGTGGGTACAGGAA 61.190 60.000 0.00 0.00 0.00 3.36
318 327 1.061546 GACAGGGTGGGTACAGGAAA 58.938 55.000 0.00 0.00 0.00 3.13
319 328 1.422402 GACAGGGTGGGTACAGGAAAA 59.578 52.381 0.00 0.00 0.00 2.29
320 329 1.423921 ACAGGGTGGGTACAGGAAAAG 59.576 52.381 0.00 0.00 0.00 2.27
321 330 0.404426 AGGGTGGGTACAGGAAAAGC 59.596 55.000 0.00 0.00 0.00 3.51
322 331 0.958876 GGGTGGGTACAGGAAAAGCG 60.959 60.000 0.00 0.00 0.00 4.68
323 332 0.035739 GGTGGGTACAGGAAAAGCGA 59.964 55.000 0.00 0.00 0.00 4.93
324 333 1.439679 GTGGGTACAGGAAAAGCGAG 58.560 55.000 0.00 0.00 0.00 5.03
325 334 0.323629 TGGGTACAGGAAAAGCGAGG 59.676 55.000 0.00 0.00 0.00 4.63
326 335 1.025113 GGGTACAGGAAAAGCGAGGC 61.025 60.000 0.00 0.00 0.00 4.70
327 336 1.025113 GGTACAGGAAAAGCGAGGCC 61.025 60.000 0.00 0.00 0.00 5.19
328 337 0.036294 GTACAGGAAAAGCGAGGCCT 60.036 55.000 3.86 3.86 0.00 5.19
329 338 3.583383 CAGGAAAAGCGAGGCCTG 58.417 61.111 12.00 3.42 41.62 4.85
330 339 1.302832 CAGGAAAAGCGAGGCCTGT 60.303 57.895 12.00 0.00 42.26 4.00
331 340 0.890996 CAGGAAAAGCGAGGCCTGTT 60.891 55.000 12.00 0.00 42.26 3.16
332 341 0.606673 AGGAAAAGCGAGGCCTGTTC 60.607 55.000 12.00 5.57 0.00 3.18
333 342 0.606673 GGAAAAGCGAGGCCTGTTCT 60.607 55.000 12.00 0.00 0.00 3.01
334 343 0.519077 GAAAAGCGAGGCCTGTTCTG 59.481 55.000 12.00 0.00 0.00 3.02
335 344 0.179018 AAAAGCGAGGCCTGTTCTGT 60.179 50.000 12.00 0.00 0.00 3.41
336 345 0.685097 AAAGCGAGGCCTGTTCTGTA 59.315 50.000 12.00 0.00 0.00 2.74
337 346 0.247736 AAGCGAGGCCTGTTCTGTAG 59.752 55.000 12.00 0.00 0.00 2.74
338 347 1.153549 GCGAGGCCTGTTCTGTAGG 60.154 63.158 12.00 0.00 38.39 3.18
339 348 1.889530 GCGAGGCCTGTTCTGTAGGT 61.890 60.000 12.00 0.00 37.64 3.08
340 349 0.608640 CGAGGCCTGTTCTGTAGGTT 59.391 55.000 12.00 0.00 37.64 3.50
341 350 1.404315 CGAGGCCTGTTCTGTAGGTTC 60.404 57.143 12.00 0.00 37.64 3.62
342 351 0.608640 AGGCCTGTTCTGTAGGTTCG 59.391 55.000 3.11 0.00 37.64 3.95
343 352 0.391263 GGCCTGTTCTGTAGGTTCGG 60.391 60.000 0.00 0.00 37.64 4.30
344 353 0.391263 GCCTGTTCTGTAGGTTCGGG 60.391 60.000 0.00 0.00 37.64 5.14
345 354 0.974383 CCTGTTCTGTAGGTTCGGGT 59.026 55.000 0.00 0.00 0.00 5.28
346 355 1.346722 CCTGTTCTGTAGGTTCGGGTT 59.653 52.381 0.00 0.00 0.00 4.11
347 356 2.564062 CCTGTTCTGTAGGTTCGGGTTA 59.436 50.000 0.00 0.00 0.00 2.85
348 357 3.197116 CCTGTTCTGTAGGTTCGGGTTAT 59.803 47.826 0.00 0.00 0.00 1.89
349 358 4.323257 CCTGTTCTGTAGGTTCGGGTTATT 60.323 45.833 0.00 0.00 0.00 1.40
350 359 5.231702 TGTTCTGTAGGTTCGGGTTATTT 57.768 39.130 0.00 0.00 0.00 1.40
351 360 4.998672 TGTTCTGTAGGTTCGGGTTATTTG 59.001 41.667 0.00 0.00 0.00 2.32
352 361 4.210724 TCTGTAGGTTCGGGTTATTTGG 57.789 45.455 0.00 0.00 0.00 3.28
353 362 3.583966 TCTGTAGGTTCGGGTTATTTGGT 59.416 43.478 0.00 0.00 0.00 3.67
354 363 4.041938 TCTGTAGGTTCGGGTTATTTGGTT 59.958 41.667 0.00 0.00 0.00 3.67
355 364 5.248020 TCTGTAGGTTCGGGTTATTTGGTTA 59.752 40.000 0.00 0.00 0.00 2.85
356 365 6.064735 TGTAGGTTCGGGTTATTTGGTTAT 57.935 37.500 0.00 0.00 0.00 1.89
357 366 6.483405 TGTAGGTTCGGGTTATTTGGTTATT 58.517 36.000 0.00 0.00 0.00 1.40
358 367 6.947158 TGTAGGTTCGGGTTATTTGGTTATTT 59.053 34.615 0.00 0.00 0.00 1.40
359 368 6.519679 AGGTTCGGGTTATTTGGTTATTTC 57.480 37.500 0.00 0.00 0.00 2.17
360 369 5.124297 AGGTTCGGGTTATTTGGTTATTTCG 59.876 40.000 0.00 0.00 0.00 3.46
361 370 5.334319 GTTCGGGTTATTTGGTTATTTCGG 58.666 41.667 0.00 0.00 0.00 4.30
362 371 4.587891 TCGGGTTATTTGGTTATTTCGGT 58.412 39.130 0.00 0.00 0.00 4.69
363 372 5.008980 TCGGGTTATTTGGTTATTTCGGTT 58.991 37.500 0.00 0.00 0.00 4.44
364 373 6.176183 TCGGGTTATTTGGTTATTTCGGTTA 58.824 36.000 0.00 0.00 0.00 2.85
365 374 6.827762 TCGGGTTATTTGGTTATTTCGGTTAT 59.172 34.615 0.00 0.00 0.00 1.89
366 375 7.012232 TCGGGTTATTTGGTTATTTCGGTTATC 59.988 37.037 0.00 0.00 0.00 1.75
367 376 7.428020 GGGTTATTTGGTTATTTCGGTTATCC 58.572 38.462 0.00 0.00 0.00 2.59
368 377 7.068470 GGGTTATTTGGTTATTTCGGTTATCCA 59.932 37.037 0.00 0.00 0.00 3.41
369 378 8.132995 GGTTATTTGGTTATTTCGGTTATCCAG 58.867 37.037 0.00 0.00 0.00 3.86
370 379 6.709018 ATTTGGTTATTTCGGTTATCCAGG 57.291 37.500 0.00 0.00 0.00 4.45
371 380 4.847990 TGGTTATTTCGGTTATCCAGGT 57.152 40.909 0.00 0.00 0.00 4.00
372 381 4.519213 TGGTTATTTCGGTTATCCAGGTG 58.481 43.478 0.00 0.00 0.00 4.00
373 382 3.314357 GGTTATTTCGGTTATCCAGGTGC 59.686 47.826 0.00 0.00 0.00 5.01
374 383 4.196971 GTTATTTCGGTTATCCAGGTGCT 58.803 43.478 0.00 0.00 0.00 4.40
375 384 5.362263 GTTATTTCGGTTATCCAGGTGCTA 58.638 41.667 0.00 0.00 0.00 3.49
376 385 3.985019 TTTCGGTTATCCAGGTGCTAA 57.015 42.857 0.00 0.00 0.00 3.09
377 386 3.985019 TTCGGTTATCCAGGTGCTAAA 57.015 42.857 0.00 0.00 0.00 1.85
378 387 3.985019 TCGGTTATCCAGGTGCTAAAA 57.015 42.857 0.00 0.00 0.00 1.52
379 388 3.602483 TCGGTTATCCAGGTGCTAAAAC 58.398 45.455 0.00 0.00 0.00 2.43
380 389 2.681344 CGGTTATCCAGGTGCTAAAACC 59.319 50.000 0.00 0.00 40.85 3.27
381 390 2.681344 GGTTATCCAGGTGCTAAAACCG 59.319 50.000 0.00 0.00 45.53 4.44
382 391 3.602483 GTTATCCAGGTGCTAAAACCGA 58.398 45.455 0.00 0.00 45.53 4.69
383 392 2.871096 ATCCAGGTGCTAAAACCGAA 57.129 45.000 0.00 0.00 45.53 4.30
384 393 2.642154 TCCAGGTGCTAAAACCGAAA 57.358 45.000 0.00 0.00 45.53 3.46
385 394 3.149005 TCCAGGTGCTAAAACCGAAAT 57.851 42.857 0.00 0.00 45.53 2.17
386 395 3.492337 TCCAGGTGCTAAAACCGAAATT 58.508 40.909 0.00 0.00 45.53 1.82
387 396 4.653868 TCCAGGTGCTAAAACCGAAATTA 58.346 39.130 0.00 0.00 45.53 1.40
388 397 4.456566 TCCAGGTGCTAAAACCGAAATTAC 59.543 41.667 0.00 0.00 45.53 1.89
389 398 4.216687 CCAGGTGCTAAAACCGAAATTACA 59.783 41.667 0.00 0.00 45.53 2.41
390 399 5.390613 CAGGTGCTAAAACCGAAATTACAG 58.609 41.667 0.00 0.00 45.53 2.74
391 400 5.180492 CAGGTGCTAAAACCGAAATTACAGA 59.820 40.000 0.00 0.00 45.53 3.41
392 401 5.766174 AGGTGCTAAAACCGAAATTACAGAA 59.234 36.000 0.00 0.00 45.53 3.02
393 402 6.433093 AGGTGCTAAAACCGAAATTACAGAAT 59.567 34.615 0.00 0.00 45.53 2.40
394 403 7.608761 AGGTGCTAAAACCGAAATTACAGAATA 59.391 33.333 0.00 0.00 45.53 1.75
395 404 8.238631 GGTGCTAAAACCGAAATTACAGAATAA 58.761 33.333 0.00 0.00 0.00 1.40
396 405 9.615295 GTGCTAAAACCGAAATTACAGAATAAA 57.385 29.630 0.00 0.00 0.00 1.40
412 421 7.816945 CAGAATAAATTTCGGTTCTGCAAAT 57.183 32.000 19.34 0.00 40.51 2.32
413 422 8.243289 CAGAATAAATTTCGGTTCTGCAAATT 57.757 30.769 19.34 2.43 40.51 1.82
414 423 8.711457 CAGAATAAATTTCGGTTCTGCAAATTT 58.289 29.630 19.34 7.82 40.51 1.82
415 424 8.711457 AGAATAAATTTCGGTTCTGCAAATTTG 58.289 29.630 14.03 14.03 39.14 2.32
416 425 8.600449 AATAAATTTCGGTTCTGCAAATTTGA 57.400 26.923 22.31 6.29 39.14 2.69
417 426 5.905480 AATTTCGGTTCTGCAAATTTGAC 57.095 34.783 22.31 13.06 0.00 3.18
418 427 4.377839 TTTCGGTTCTGCAAATTTGACA 57.622 36.364 22.31 16.61 0.00 3.58
419 428 4.377839 TTCGGTTCTGCAAATTTGACAA 57.622 36.364 22.31 7.48 0.00 3.18
420 429 3.701241 TCGGTTCTGCAAATTTGACAAC 58.299 40.909 22.31 17.49 0.00 3.32
421 430 2.794350 CGGTTCTGCAAATTTGACAACC 59.206 45.455 22.31 23.14 33.13 3.77
422 431 2.794350 GGTTCTGCAAATTTGACAACCG 59.206 45.455 22.31 7.87 0.00 4.44
423 432 3.490078 GGTTCTGCAAATTTGACAACCGA 60.490 43.478 22.31 9.79 0.00 4.69
424 433 4.109050 GTTCTGCAAATTTGACAACCGAA 58.891 39.130 22.31 14.22 0.00 4.30
425 434 4.377839 TCTGCAAATTTGACAACCGAAA 57.622 36.364 22.31 0.00 0.00 3.46
426 435 4.942852 TCTGCAAATTTGACAACCGAAAT 58.057 34.783 22.31 0.00 0.00 2.17
427 436 6.078202 TCTGCAAATTTGACAACCGAAATA 57.922 33.333 22.31 0.00 0.00 1.40
428 437 6.148948 TCTGCAAATTTGACAACCGAAATAG 58.851 36.000 22.31 4.83 0.00 1.73
429 438 5.226396 TGCAAATTTGACAACCGAAATAGG 58.774 37.500 22.31 0.00 37.30 2.57
430 439 5.010112 TGCAAATTTGACAACCGAAATAGGA 59.990 36.000 22.31 0.00 34.73 2.94
431 440 5.923684 GCAAATTTGACAACCGAAATAGGAA 59.076 36.000 22.31 0.00 34.73 3.36
432 441 6.128929 GCAAATTTGACAACCGAAATAGGAAC 60.129 38.462 22.31 0.00 34.73 3.62
433 442 5.638596 ATTTGACAACCGAAATAGGAACC 57.361 39.130 0.00 0.00 34.73 3.62
434 443 4.360951 TTGACAACCGAAATAGGAACCT 57.639 40.909 0.00 0.00 34.73 3.50
435 444 5.486735 TTGACAACCGAAATAGGAACCTA 57.513 39.130 2.93 2.93 34.73 3.08
436 445 5.486735 TGACAACCGAAATAGGAACCTAA 57.513 39.130 4.63 0.00 34.73 2.69
437 446 5.867330 TGACAACCGAAATAGGAACCTAAA 58.133 37.500 4.63 0.00 34.73 1.85
438 447 6.478129 TGACAACCGAAATAGGAACCTAAAT 58.522 36.000 4.63 0.00 34.73 1.40
439 448 6.943718 TGACAACCGAAATAGGAACCTAAATT 59.056 34.615 4.63 3.79 34.73 1.82
440 449 7.449086 TGACAACCGAAATAGGAACCTAAATTT 59.551 33.333 4.63 3.38 34.73 1.82
441 450 8.185506 ACAACCGAAATAGGAACCTAAATTTT 57.814 30.769 4.63 1.78 34.73 1.82
442 451 8.301720 ACAACCGAAATAGGAACCTAAATTTTC 58.698 33.333 4.63 9.23 34.73 2.29
443 452 7.080353 ACCGAAATAGGAACCTAAATTTTCG 57.920 36.000 25.01 25.01 42.23 3.46
445 454 7.080353 CGAAATAGGAACCTAAATTTTCGGT 57.920 36.000 24.63 0.75 40.73 4.69
446 455 7.532571 CGAAATAGGAACCTAAATTTTCGGTT 58.467 34.615 24.63 18.90 40.73 4.44
447 456 8.024865 CGAAATAGGAACCTAAATTTTCGGTTT 58.975 33.333 24.63 11.91 40.73 3.27
448 457 9.350357 GAAATAGGAACCTAAATTTTCGGTTTC 57.650 33.333 19.49 18.15 40.88 2.78
449 458 5.366829 AGGAACCTAAATTTTCGGTTTCG 57.633 39.130 19.49 0.00 40.50 3.46
450 459 4.216902 AGGAACCTAAATTTTCGGTTTCGG 59.783 41.667 19.49 3.35 40.50 4.30
451 460 3.564235 ACCTAAATTTTCGGTTTCGGC 57.436 42.857 0.00 0.00 36.95 5.54
452 461 2.229543 ACCTAAATTTTCGGTTTCGGCC 59.770 45.455 0.00 0.00 36.95 6.13
453 462 2.416296 CCTAAATTTTCGGTTTCGGCCC 60.416 50.000 0.00 0.00 36.95 5.80
454 463 0.319083 AAATTTTCGGTTTCGGCCCC 59.681 50.000 0.00 0.00 36.95 5.80
455 464 1.868987 AATTTTCGGTTTCGGCCCCG 61.869 55.000 11.56 11.56 45.55 5.73
459 468 4.391601 CGGTTTCGGCCCCGGTTA 62.392 66.667 10.07 0.00 40.54 2.85
460 469 2.273123 GGTTTCGGCCCCGGTTAT 59.727 61.111 6.90 0.00 40.25 1.89
461 470 1.378911 GGTTTCGGCCCCGGTTATT 60.379 57.895 6.90 0.00 40.25 1.40
462 471 0.966875 GGTTTCGGCCCCGGTTATTT 60.967 55.000 6.90 0.00 40.25 1.40
463 472 0.452987 GTTTCGGCCCCGGTTATTTC 59.547 55.000 6.90 0.00 40.25 2.17
464 473 1.025647 TTTCGGCCCCGGTTATTTCG 61.026 55.000 6.90 0.00 40.25 3.46
465 474 2.872931 TTCGGCCCCGGTTATTTCGG 62.873 60.000 6.90 0.00 46.43 4.30
466 475 2.273123 GGCCCCGGTTATTTCGGT 59.727 61.111 0.00 0.00 45.51 4.69
467 476 1.378911 GGCCCCGGTTATTTCGGTT 60.379 57.895 0.00 0.00 45.51 4.44
468 477 1.378882 GGCCCCGGTTATTTCGGTTC 61.379 60.000 0.00 0.00 45.51 3.62
469 478 1.708193 GCCCCGGTTATTTCGGTTCG 61.708 60.000 0.00 0.00 45.51 3.95
470 479 1.091197 CCCCGGTTATTTCGGTTCGG 61.091 60.000 0.00 0.00 45.51 4.30
471 480 0.391528 CCCGGTTATTTCGGTTCGGT 60.392 55.000 0.00 0.00 45.51 4.69
472 481 0.722848 CCGGTTATTTCGGTTCGGTG 59.277 55.000 0.00 0.00 42.33 4.94
473 482 0.095762 CGGTTATTTCGGTTCGGTGC 59.904 55.000 0.00 0.00 0.00 5.01
474 483 1.158434 GGTTATTTCGGTTCGGTGCA 58.842 50.000 0.00 0.00 0.00 4.57
475 484 1.741145 GGTTATTTCGGTTCGGTGCAT 59.259 47.619 0.00 0.00 0.00 3.96
476 485 2.223180 GGTTATTTCGGTTCGGTGCATC 60.223 50.000 0.00 0.00 0.00 3.91
477 486 1.282817 TATTTCGGTTCGGTGCATCG 58.717 50.000 14.66 14.66 0.00 3.84
478 487 1.366111 ATTTCGGTTCGGTGCATCGG 61.366 55.000 21.08 2.86 0.00 4.18
479 488 2.718747 TTTCGGTTCGGTGCATCGGT 62.719 55.000 21.08 0.00 0.00 4.69
480 489 3.186047 CGGTTCGGTGCATCGGTC 61.186 66.667 21.08 12.52 0.00 4.79
481 490 2.818274 GGTTCGGTGCATCGGTCC 60.818 66.667 21.08 17.70 0.00 4.46
482 491 2.264794 GTTCGGTGCATCGGTCCT 59.735 61.111 21.08 0.00 0.00 3.85
483 492 1.810030 GTTCGGTGCATCGGTCCTC 60.810 63.158 21.08 2.13 0.00 3.71
484 493 3.014085 TTCGGTGCATCGGTCCTCC 62.014 63.158 21.08 0.00 0.00 4.30
496 505 2.180432 GGTCCTCCGTTAATATGGCC 57.820 55.000 0.00 0.00 0.00 5.36
497 506 1.418637 GGTCCTCCGTTAATATGGCCA 59.581 52.381 8.56 8.56 0.00 5.36
498 507 2.490991 GTCCTCCGTTAATATGGCCAC 58.509 52.381 8.16 0.00 0.00 5.01
499 508 1.418637 TCCTCCGTTAATATGGCCACC 59.581 52.381 8.16 0.00 0.00 4.61
500 509 1.544759 CCTCCGTTAATATGGCCACCC 60.545 57.143 8.16 0.00 0.00 4.61
501 510 0.475044 TCCGTTAATATGGCCACCCC 59.525 55.000 8.16 0.00 0.00 4.95
502 511 0.476771 CCGTTAATATGGCCACCCCT 59.523 55.000 8.16 0.00 0.00 4.79
503 512 1.700739 CCGTTAATATGGCCACCCCTA 59.299 52.381 8.16 0.00 0.00 3.53
504 513 2.551504 CCGTTAATATGGCCACCCCTAC 60.552 54.545 8.16 3.02 0.00 3.18
505 514 2.370849 CGTTAATATGGCCACCCCTACT 59.629 50.000 8.16 0.00 0.00 2.57
506 515 3.579586 CGTTAATATGGCCACCCCTACTA 59.420 47.826 8.16 0.00 0.00 1.82
513 522 2.181419 TGGCCACCCCTACTACAGATAT 59.819 50.000 0.00 0.00 0.00 1.63
682 714 1.063469 CGACGCACAACTTTGAGGTTT 59.937 47.619 0.00 0.00 0.00 3.27
683 715 2.477189 CGACGCACAACTTTGAGGTTTT 60.477 45.455 0.00 0.00 0.00 2.43
720 752 4.755507 AGGGACGGACGGAGGGAC 62.756 72.222 0.00 0.00 0.00 4.46
759 1670 1.337823 CCGACGACACTCAAAGGGAAT 60.338 52.381 0.00 0.00 0.00 3.01
765 1676 1.247567 CACTCAAAGGGAATGCGGTT 58.752 50.000 0.00 0.00 0.00 4.44
859 2386 7.775120 TCAGTAAAATTTCCCTACTAGTACCG 58.225 38.462 0.00 0.00 0.00 4.02
934 4534 1.214589 CCTCGTACCCACACCGAAG 59.785 63.158 0.00 0.00 0.00 3.79
1036 7356 1.453745 CGGCTGCTCTCTCTCCTCT 60.454 63.158 0.00 0.00 0.00 3.69
1154 7474 2.184579 CGAGTCCCCTTTCTCCGC 59.815 66.667 0.00 0.00 0.00 5.54
1338 7658 1.153745 CCCGAAGTTCCTCTGCTCG 60.154 63.158 0.00 0.00 0.00 5.03
1503 7823 1.080974 GTTCGGCTCCTTCGACGAA 60.081 57.895 10.34 10.34 42.26 3.85
1629 7949 3.002348 GGTTAAAAATCCCTCATCTCGCG 59.998 47.826 0.00 0.00 0.00 5.87
1710 8030 3.494336 GCACGCGCAGATGAGCTT 61.494 61.111 5.73 0.00 38.74 3.74
1751 8071 1.069703 CCAATTCATGTATGCGCTCGG 60.070 52.381 9.73 0.00 0.00 4.63
1752 8072 1.069703 CAATTCATGTATGCGCTCGGG 60.070 52.381 9.73 0.00 0.00 5.14
1923 8243 4.278975 AGAGTTCCTGATCAACAAGGTC 57.721 45.455 0.00 0.00 0.00 3.85
2021 8341 5.050769 GGTACATTGTCATGAAGATACTGCG 60.051 44.000 0.00 0.00 34.11 5.18
2056 8376 5.065704 TCTGAGTTCTGACTATTGCTCAC 57.934 43.478 0.00 0.00 35.88 3.51
2059 8379 3.594134 AGTTCTGACTATTGCTCACTGC 58.406 45.455 0.00 0.00 36.88 4.40
2062 8382 4.277515 TCTGACTATTGCTCACTGCTTT 57.722 40.909 0.00 0.00 43.37 3.51
2075 8395 0.805322 CTGCTTTCTGCGAGCGAGAT 60.805 55.000 0.00 0.00 46.63 2.75
2085 8405 2.259618 GCGAGCGAGATGTACTTCAAA 58.740 47.619 11.02 0.00 0.00 2.69
2101 8421 6.496338 ACTTCAAATCAAGGTTTATCGACC 57.504 37.500 0.00 0.00 40.11 4.79
2102 8422 5.121768 ACTTCAAATCAAGGTTTATCGACCG 59.878 40.000 0.00 0.00 44.62 4.79
2188 8508 1.867233 CTCACCTCAAACCTTGACACG 59.133 52.381 0.00 0.00 35.46 4.49
2212 8532 9.470399 ACGTTTTAGGGATATTGAAGGTTAATT 57.530 29.630 0.00 0.00 0.00 1.40
2251 8578 2.928757 CACATAGCACTGCTCTTGTCTC 59.071 50.000 6.86 0.00 40.44 3.36
2340 8667 3.705604 ACAAGTTCCATTTGCTGAAACG 58.294 40.909 0.00 0.00 0.00 3.60
2371 8699 9.665719 AAATGGTTAAAGTTCTGATTTTGTTGT 57.334 25.926 0.00 0.00 0.00 3.32
2406 8755 5.845985 TGAAGCAAGTGAATTAGACGAAG 57.154 39.130 0.00 0.00 0.00 3.79
2430 8779 8.592105 AGTTGTGGTAAAACATCATGAAATTG 57.408 30.769 0.00 0.00 0.00 2.32
2451 8800 3.064207 GAGTGTTGTATTCGCTGTTGGA 58.936 45.455 0.00 0.00 0.00 3.53
2462 8811 1.689959 GCTGTTGGACGCTGAAAATG 58.310 50.000 0.00 0.00 0.00 2.32
2474 8823 2.910199 CTGAAAATGGATGGCTCTCGA 58.090 47.619 0.00 0.00 0.00 4.04
2537 8890 6.970613 CGGCTGTTTATTGGGTATAAAACTTC 59.029 38.462 0.00 0.00 39.70 3.01
2539 8892 7.973944 GGCTGTTTATTGGGTATAAAACTTCTG 59.026 37.037 0.00 0.00 39.70 3.02
2554 8907 7.857734 AAAACTTCTGTTTACAAATTTGGGG 57.142 32.000 21.74 5.75 44.70 4.96
2571 8924 1.690985 GGGGTTGAGAGGGAGGGAG 60.691 68.421 0.00 0.00 0.00 4.30
2575 8928 1.127343 GTTGAGAGGGAGGGAGATGG 58.873 60.000 0.00 0.00 0.00 3.51
2589 8942 3.372025 GGGAGATGGATGTAGTGCCTTTT 60.372 47.826 0.00 0.00 0.00 2.27
2590 8943 3.629398 GGAGATGGATGTAGTGCCTTTTG 59.371 47.826 0.00 0.00 0.00 2.44
2598 8951 4.727507 TGTAGTGCCTTTTGCTTTTTCA 57.272 36.364 0.00 0.00 42.00 2.69
2599 8952 4.429108 TGTAGTGCCTTTTGCTTTTTCAC 58.571 39.130 0.00 0.00 42.00 3.18
2606 8959 5.064962 TGCCTTTTGCTTTTTCACTGATTTG 59.935 36.000 0.00 0.00 42.00 2.32
2608 8961 5.585844 CCTTTTGCTTTTTCACTGATTTGGT 59.414 36.000 0.00 0.00 0.00 3.67
2611 8964 3.243367 TGCTTTTTCACTGATTTGGTCGG 60.243 43.478 0.00 0.00 39.25 4.79
2654 9044 5.521906 TCAGGATTCGTGAGGAATTAGAG 57.478 43.478 4.98 0.00 45.33 2.43
2674 9064 2.846827 AGCTTTGAGCAAGGTATAGGGT 59.153 45.455 2.47 0.00 45.56 4.34
2680 9070 1.480954 AGCAAGGTATAGGGTGTCACG 59.519 52.381 0.00 0.00 0.00 4.35
2690 9080 0.971386 GGGTGTCACGGGAGTTTCTA 59.029 55.000 0.00 0.00 44.67 2.10
2709 9099 4.048470 GGTTGGGGTCCTCTGCCC 62.048 72.222 0.00 0.00 45.35 5.36
2720 9130 4.659172 TCTGCCCGGCAAAGGTGG 62.659 66.667 14.45 0.16 38.41 4.61
2738 9148 0.533032 GGAGTTCTGAACCTCCTCCG 59.467 60.000 21.55 0.00 33.02 4.63
2754 9164 2.290641 CCTCCGTTGGAAACTTTGTGAG 59.709 50.000 0.00 0.00 46.99 3.51
2762 9172 1.871676 GAAACTTTGTGAGTCCCCGTC 59.128 52.381 0.00 0.00 37.72 4.79
2789 9212 5.484173 TCCGAAATATTGTTGAGCATGTC 57.516 39.130 0.00 0.00 0.00 3.06
2799 9222 1.896220 TGAGCATGTCCAAACCTGAC 58.104 50.000 0.00 0.00 0.00 3.51
2801 9224 1.808945 GAGCATGTCCAAACCTGACAG 59.191 52.381 0.00 0.00 45.20 3.51
2835 9258 1.199327 CTGCTGCACATCAAGAACAGG 59.801 52.381 0.00 0.00 0.00 4.00
2846 9269 0.694771 AAGAACAGGGAGCTGCATCA 59.305 50.000 7.79 0.00 0.00 3.07
2855 9278 0.447011 GAGCTGCATCACTGTCTTGC 59.553 55.000 1.02 4.89 36.91 4.01
2861 9284 1.542915 GCATCACTGTCTTGCATGGTT 59.457 47.619 6.61 0.00 36.40 3.67
2863 9286 3.181503 GCATCACTGTCTTGCATGGTTAG 60.182 47.826 6.61 0.00 36.40 2.34
2864 9287 3.057969 TCACTGTCTTGCATGGTTAGG 57.942 47.619 0.00 0.00 0.00 2.69
2866 9289 1.098050 CTGTCTTGCATGGTTAGGGC 58.902 55.000 0.00 0.00 0.00 5.19
2867 9290 0.403655 TGTCTTGCATGGTTAGGGCA 59.596 50.000 0.00 0.00 35.41 5.36
2868 9291 1.005805 TGTCTTGCATGGTTAGGGCAT 59.994 47.619 0.00 0.00 37.39 4.40
2872 9295 0.183492 TGCATGGTTAGGGCATCTCC 59.817 55.000 0.00 0.00 31.58 3.71
2873 9296 0.183492 GCATGGTTAGGGCATCTCCA 59.817 55.000 0.00 0.00 36.21 3.86
2874 9297 1.816961 GCATGGTTAGGGCATCTCCAG 60.817 57.143 0.00 0.00 36.21 3.86
2875 9298 0.475906 ATGGTTAGGGCATCTCCAGC 59.524 55.000 2.19 0.00 36.21 4.85
2902 9325 3.083386 CCCAGGGGGCGTCTAAAA 58.917 61.111 0.00 0.00 35.35 1.52
2903 9326 1.077716 CCCAGGGGGCGTCTAAAAG 60.078 63.158 0.00 0.00 35.35 2.27
2904 9327 1.749258 CCAGGGGGCGTCTAAAAGC 60.749 63.158 0.00 0.00 0.00 3.51
2905 9328 2.106683 CAGGGGGCGTCTAAAAGCG 61.107 63.158 0.00 0.00 0.00 4.68
2910 9333 4.516135 GCGTCTAAAAGCGCCGCC 62.516 66.667 4.98 0.00 46.93 6.13
2911 9334 2.813908 CGTCTAAAAGCGCCGCCT 60.814 61.111 4.98 0.00 0.00 5.52
2912 9335 2.785258 GTCTAAAAGCGCCGCCTG 59.215 61.111 4.98 0.00 0.00 4.85
2913 9336 2.435938 TCTAAAAGCGCCGCCTGG 60.436 61.111 4.98 0.00 38.77 4.45
2914 9337 3.508840 CTAAAAGCGCCGCCTGGG 61.509 66.667 4.98 0.00 39.58 4.45
2962 9385 4.700365 GCGGTTTTGCGCCCAGTC 62.700 66.667 4.18 0.00 0.00 3.51
2963 9386 4.383602 CGGTTTTGCGCCCAGTCG 62.384 66.667 4.18 0.00 0.00 4.18
2964 9387 3.284449 GGTTTTGCGCCCAGTCGT 61.284 61.111 4.18 0.00 0.00 4.34
2965 9388 2.251371 GTTTTGCGCCCAGTCGTC 59.749 61.111 4.18 0.00 0.00 4.20
2966 9389 3.342627 TTTTGCGCCCAGTCGTCG 61.343 61.111 4.18 0.00 0.00 5.12
2993 9416 4.697756 CGTCCCCAGGCGCTGAAA 62.698 66.667 7.64 0.00 32.44 2.69
2994 9417 2.044946 GTCCCCAGGCGCTGAAAT 60.045 61.111 7.64 0.00 32.44 2.17
2995 9418 1.678970 GTCCCCAGGCGCTGAAATT 60.679 57.895 7.64 0.00 32.44 1.82
2996 9419 1.678635 TCCCCAGGCGCTGAAATTG 60.679 57.895 7.64 0.00 32.44 2.32
2997 9420 2.713967 CCCCAGGCGCTGAAATTGG 61.714 63.158 7.64 6.02 32.44 3.16
2998 9421 2.182537 CCAGGCGCTGAAATTGGC 59.817 61.111 7.64 0.00 32.44 4.52
2999 9422 2.182537 CAGGCGCTGAAATTGGCC 59.817 61.111 7.64 0.00 45.91 5.36
3000 9423 3.070576 AGGCGCTGAAATTGGCCC 61.071 61.111 7.64 0.00 46.75 5.80
3001 9424 3.381136 GGCGCTGAAATTGGCCCA 61.381 61.111 7.64 0.00 39.67 5.36
3002 9425 2.125952 GCGCTGAAATTGGCCCAC 60.126 61.111 0.00 0.00 0.00 4.61
3003 9426 2.639327 GCGCTGAAATTGGCCCACT 61.639 57.895 0.00 0.00 0.00 4.00
3004 9427 1.966762 CGCTGAAATTGGCCCACTT 59.033 52.632 0.00 0.00 0.00 3.16
3005 9428 0.318120 CGCTGAAATTGGCCCACTTT 59.682 50.000 0.00 0.00 0.00 2.66
3006 9429 1.799544 GCTGAAATTGGCCCACTTTG 58.200 50.000 3.51 0.00 0.00 2.77
3007 9430 1.799544 CTGAAATTGGCCCACTTTGC 58.200 50.000 3.51 0.00 0.00 3.68
3008 9431 1.070445 CTGAAATTGGCCCACTTTGCA 59.930 47.619 3.51 2.03 0.00 4.08
3009 9432 1.070445 TGAAATTGGCCCACTTTGCAG 59.930 47.619 3.51 0.00 0.00 4.41
3010 9433 0.250424 AAATTGGCCCACTTTGCAGC 60.250 50.000 0.00 0.00 0.00 5.25
3011 9434 2.115734 AATTGGCCCACTTTGCAGCC 62.116 55.000 0.00 5.48 45.96 4.85
3014 9437 2.999063 GCCCACTTTGCAGCCCAT 60.999 61.111 0.00 0.00 0.00 4.00
3015 9438 2.586293 GCCCACTTTGCAGCCCATT 61.586 57.895 0.00 0.00 0.00 3.16
3016 9439 2.060370 CCCACTTTGCAGCCCATTT 58.940 52.632 0.00 0.00 0.00 2.32
3017 9440 0.397564 CCCACTTTGCAGCCCATTTT 59.602 50.000 0.00 0.00 0.00 1.82
3018 9441 1.608801 CCCACTTTGCAGCCCATTTTC 60.609 52.381 0.00 0.00 0.00 2.29
3019 9442 1.421382 CACTTTGCAGCCCATTTTCG 58.579 50.000 0.00 0.00 0.00 3.46
3020 9443 0.318120 ACTTTGCAGCCCATTTTCGG 59.682 50.000 0.00 0.00 0.00 4.30
3028 9451 2.570442 GCCCATTTTCGGCGAATAAA 57.430 45.000 24.33 16.00 36.47 1.40
3029 9452 2.190161 GCCCATTTTCGGCGAATAAAC 58.810 47.619 24.33 7.58 36.47 2.01
3030 9453 2.446282 CCCATTTTCGGCGAATAAACG 58.554 47.619 24.33 8.16 0.00 3.60
3031 9454 2.446282 CCATTTTCGGCGAATAAACGG 58.554 47.619 24.33 13.76 0.00 4.44
3039 9462 2.611974 GCGAATAAACGGCCCATATG 57.388 50.000 0.00 0.00 0.00 1.78
3040 9463 1.199097 GCGAATAAACGGCCCATATGG 59.801 52.381 15.41 15.41 37.09 2.74
3052 9475 2.029838 CCATATGGGCGAGAATAGGC 57.970 55.000 14.52 0.00 34.95 3.93
3059 9482 2.789409 GGCGAGAATAGGCCCATATT 57.211 50.000 0.00 0.00 43.64 1.28
3060 9483 2.633488 GGCGAGAATAGGCCCATATTC 58.367 52.381 14.20 14.20 43.64 1.75
3061 9484 2.271800 GCGAGAATAGGCCCATATTCG 58.728 52.381 15.47 13.38 43.79 3.34
3062 9485 2.893637 CGAGAATAGGCCCATATTCGG 58.106 52.381 15.47 10.10 43.79 4.30
3063 9486 2.633488 GAGAATAGGCCCATATTCGGC 58.367 52.381 15.47 10.24 43.79 5.54
3068 9491 2.203153 GCCCATATTCGGCGTGGT 60.203 61.111 6.85 0.00 36.47 4.16
3069 9492 1.822186 GCCCATATTCGGCGTGGTT 60.822 57.895 6.85 0.00 36.47 3.67
3070 9493 1.381165 GCCCATATTCGGCGTGGTTT 61.381 55.000 6.85 0.00 36.47 3.27
3071 9494 0.661020 CCCATATTCGGCGTGGTTTC 59.339 55.000 6.85 0.00 0.00 2.78
3072 9495 0.303493 CCATATTCGGCGTGGTTTCG 59.697 55.000 6.85 0.00 0.00 3.46
3073 9496 0.303493 CATATTCGGCGTGGTTTCGG 59.697 55.000 6.85 0.00 0.00 4.30
3078 9501 4.379143 GGCGTGGTTTCGGCGTTC 62.379 66.667 6.85 0.00 45.25 3.95
3079 9502 3.641986 GCGTGGTTTCGGCGTTCA 61.642 61.111 6.85 0.00 0.00 3.18
3080 9503 3.015677 CGTGGTTTCGGCGTTCAA 58.984 55.556 6.85 0.00 0.00 2.69
3081 9504 1.572447 CGTGGTTTCGGCGTTCAAT 59.428 52.632 6.85 0.00 0.00 2.57
3082 9505 0.040781 CGTGGTTTCGGCGTTCAATT 60.041 50.000 6.85 0.00 0.00 2.32
3083 9506 1.194997 CGTGGTTTCGGCGTTCAATTA 59.805 47.619 6.85 0.00 0.00 1.40
3084 9507 2.159626 CGTGGTTTCGGCGTTCAATTAT 60.160 45.455 6.85 0.00 0.00 1.28
3085 9508 3.422655 GTGGTTTCGGCGTTCAATTATC 58.577 45.455 6.85 0.00 0.00 1.75
3086 9509 3.075148 TGGTTTCGGCGTTCAATTATCA 58.925 40.909 6.85 0.00 0.00 2.15
3087 9510 3.502595 TGGTTTCGGCGTTCAATTATCAA 59.497 39.130 6.85 0.00 0.00 2.57
3088 9511 3.849708 GGTTTCGGCGTTCAATTATCAAC 59.150 43.478 6.85 0.00 0.00 3.18
3089 9512 4.468643 GTTTCGGCGTTCAATTATCAACA 58.531 39.130 6.85 0.00 0.00 3.33
3090 9513 3.733024 TCGGCGTTCAATTATCAACAC 57.267 42.857 6.85 0.00 0.00 3.32
3091 9514 3.067833 TCGGCGTTCAATTATCAACACA 58.932 40.909 6.85 0.00 0.00 3.72
3092 9515 3.120477 TCGGCGTTCAATTATCAACACAC 60.120 43.478 6.85 0.00 0.00 3.82
3093 9516 3.364465 CGGCGTTCAATTATCAACACACA 60.364 43.478 0.00 0.00 0.00 3.72
3094 9517 3.911964 GGCGTTCAATTATCAACACACAC 59.088 43.478 0.00 0.00 0.00 3.82
3095 9518 4.532276 GCGTTCAATTATCAACACACACA 58.468 39.130 0.00 0.00 0.00 3.72
3096 9519 5.153513 GCGTTCAATTATCAACACACACAT 58.846 37.500 0.00 0.00 0.00 3.21
3097 9520 6.310960 GCGTTCAATTATCAACACACACATA 58.689 36.000 0.00 0.00 0.00 2.29
3098 9521 6.966632 GCGTTCAATTATCAACACACACATAT 59.033 34.615 0.00 0.00 0.00 1.78
3099 9522 7.484641 GCGTTCAATTATCAACACACACATATT 59.515 33.333 0.00 0.00 0.00 1.28
3100 9523 9.340695 CGTTCAATTATCAACACACACATATTT 57.659 29.630 0.00 0.00 0.00 1.40
3107 9530 6.874288 TCAACACACACATATTTCATCACA 57.126 33.333 0.00 0.00 0.00 3.58
3108 9531 6.901265 TCAACACACACATATTTCATCACAG 58.099 36.000 0.00 0.00 0.00 3.66
3109 9532 6.709846 TCAACACACACATATTTCATCACAGA 59.290 34.615 0.00 0.00 0.00 3.41
3110 9533 7.228308 TCAACACACACATATTTCATCACAGAA 59.772 33.333 0.00 0.00 0.00 3.02
3111 9534 7.509141 ACACACACATATTTCATCACAGAAA 57.491 32.000 0.00 0.00 41.31 2.52
3112 9535 7.939782 ACACACACATATTTCATCACAGAAAA 58.060 30.769 0.00 0.00 40.54 2.29
3113 9536 8.412456 ACACACACATATTTCATCACAGAAAAA 58.588 29.630 0.00 0.00 40.54 1.94
3114 9537 9.414295 CACACACATATTTCATCACAGAAAAAT 57.586 29.630 0.00 0.00 40.54 1.82
3115 9538 9.630098 ACACACATATTTCATCACAGAAAAATC 57.370 29.630 0.00 0.00 40.54 2.17
3116 9539 9.628746 CACACATATTTCATCACAGAAAAATCA 57.371 29.630 0.00 0.00 40.54 2.57
3146 9569 9.915629 ACTTCAACAAAATACTACAACAACAAA 57.084 25.926 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.515797 ACAGGCTCACTAAAAAGGAAAAC 57.484 39.130 0.00 0.00 0.00 2.43
21 22 1.538512 TGTACTGACACGTACAGGCTC 59.461 52.381 20.55 12.88 43.36 4.70
47 48 1.139654 GCTAGCCATGTGTCTCATCCA 59.860 52.381 2.29 0.00 34.09 3.41
51 52 0.538584 CCAGCTAGCCATGTGTCTCA 59.461 55.000 12.13 0.00 0.00 3.27
57 58 2.040178 GGTAGTACCAGCTAGCCATGT 58.960 52.381 14.82 8.83 38.42 3.21
58 59 2.320781 AGGTAGTACCAGCTAGCCATG 58.679 52.381 21.49 3.78 41.95 3.66
100 104 0.179045 CGGGGAGCCACATAGAAAGG 60.179 60.000 0.00 0.00 0.00 3.11
115 119 0.538584 GGTTTAGTACCACCTCGGGG 59.461 60.000 0.00 0.00 46.92 5.73
141 145 7.149351 GCAAAATACGTTAATTGCGCTATAGTG 60.149 37.037 9.73 9.02 38.79 2.74
167 171 2.045438 TGTAGCAACCGGCCCATG 60.045 61.111 0.00 0.00 46.50 3.66
170 174 0.179468 TATTCTGTAGCAACCGGCCC 59.821 55.000 0.00 0.00 46.50 5.80
171 175 1.134491 AGTATTCTGTAGCAACCGGCC 60.134 52.381 0.00 0.00 46.50 6.13
172 176 2.311124 AGTATTCTGTAGCAACCGGC 57.689 50.000 0.00 0.00 45.30 6.13
173 177 2.936498 CCAAGTATTCTGTAGCAACCGG 59.064 50.000 0.00 0.00 0.00 5.28
174 178 2.936498 CCCAAGTATTCTGTAGCAACCG 59.064 50.000 0.00 0.00 0.00 4.44
175 179 2.683362 GCCCAAGTATTCTGTAGCAACC 59.317 50.000 0.00 0.00 0.00 3.77
176 180 2.683362 GGCCCAAGTATTCTGTAGCAAC 59.317 50.000 0.00 0.00 0.00 4.17
177 181 2.307392 TGGCCCAAGTATTCTGTAGCAA 59.693 45.455 0.00 0.00 0.00 3.91
178 182 1.912731 TGGCCCAAGTATTCTGTAGCA 59.087 47.619 0.00 0.00 0.00 3.49
179 183 2.710096 TGGCCCAAGTATTCTGTAGC 57.290 50.000 0.00 0.00 0.00 3.58
180 184 4.102524 TGGTATGGCCCAAGTATTCTGTAG 59.897 45.833 0.00 0.00 36.04 2.74
181 185 4.041464 TGGTATGGCCCAAGTATTCTGTA 58.959 43.478 0.00 0.00 36.04 2.74
182 186 2.849943 TGGTATGGCCCAAGTATTCTGT 59.150 45.455 0.00 0.00 36.04 3.41
183 187 3.576078 TGGTATGGCCCAAGTATTCTG 57.424 47.619 0.00 0.00 36.04 3.02
184 188 4.278310 GTTTGGTATGGCCCAAGTATTCT 58.722 43.478 0.00 0.00 44.93 2.40
185 189 3.066203 CGTTTGGTATGGCCCAAGTATTC 59.934 47.826 0.00 0.00 44.93 1.75
186 190 3.020984 CGTTTGGTATGGCCCAAGTATT 58.979 45.455 0.00 0.00 44.93 1.89
187 191 2.025699 ACGTTTGGTATGGCCCAAGTAT 60.026 45.455 0.00 0.00 44.93 2.12
188 192 1.351683 ACGTTTGGTATGGCCCAAGTA 59.648 47.619 0.00 0.00 44.93 2.24
189 193 0.111639 ACGTTTGGTATGGCCCAAGT 59.888 50.000 0.00 0.00 44.93 3.16
190 194 0.525761 CACGTTTGGTATGGCCCAAG 59.474 55.000 0.00 0.00 44.93 3.61
191 195 0.178987 ACACGTTTGGTATGGCCCAA 60.179 50.000 0.00 0.00 42.69 4.12
208 212 4.458397 TGGACCCAATTTAACAACGTACA 58.542 39.130 0.00 0.00 0.00 2.90
222 226 4.844085 TCTCAGAGTTCTTATTGGACCCAA 59.156 41.667 3.70 3.70 40.47 4.12
225 229 6.043854 AGTTCTCAGAGTTCTTATTGGACC 57.956 41.667 0.00 0.00 0.00 4.46
227 231 8.651589 TCTAAGTTCTCAGAGTTCTTATTGGA 57.348 34.615 13.38 8.09 0.00 3.53
228 232 7.491048 GCTCTAAGTTCTCAGAGTTCTTATTGG 59.509 40.741 13.38 9.68 40.40 3.16
229 233 7.219917 CGCTCTAAGTTCTCAGAGTTCTTATTG 59.780 40.741 13.38 11.19 40.40 1.90
230 234 7.254852 CGCTCTAAGTTCTCAGAGTTCTTATT 58.745 38.462 13.38 0.63 40.40 1.40
231 235 6.679392 GCGCTCTAAGTTCTCAGAGTTCTTAT 60.679 42.308 0.00 0.00 40.40 1.73
232 236 5.392165 GCGCTCTAAGTTCTCAGAGTTCTTA 60.392 44.000 0.00 7.02 40.40 2.10
233 237 4.617298 GCGCTCTAAGTTCTCAGAGTTCTT 60.617 45.833 0.00 12.11 40.40 2.52
235 239 3.119637 AGCGCTCTAAGTTCTCAGAGTTC 60.120 47.826 2.64 0.00 40.40 3.01
237 241 2.422127 GAGCGCTCTAAGTTCTCAGAGT 59.578 50.000 29.88 0.00 40.40 3.24
238 242 2.538737 CGAGCGCTCTAAGTTCTCAGAG 60.539 54.545 32.88 10.53 41.08 3.35
239 243 1.398739 CGAGCGCTCTAAGTTCTCAGA 59.601 52.381 32.88 0.00 0.00 3.27
240 244 1.532921 CCGAGCGCTCTAAGTTCTCAG 60.533 57.143 32.88 14.36 0.00 3.35
241 245 0.452184 CCGAGCGCTCTAAGTTCTCA 59.548 55.000 32.88 0.00 0.00 3.27
242 246 0.452585 ACCGAGCGCTCTAAGTTCTC 59.547 55.000 32.88 6.64 0.00 2.87
259 268 1.153086 CAGCTGGCCCATGTAGACC 60.153 63.158 5.57 0.00 0.00 3.85
261 270 3.323622 CCAGCTGGCCCATGTAGA 58.676 61.111 22.33 0.00 0.00 2.59
290 299 2.591753 CACCCTGTCGATGCCCAT 59.408 61.111 0.00 0.00 0.00 4.00
292 301 4.489771 CCCACCCTGTCGATGCCC 62.490 72.222 0.00 0.00 0.00 5.36
296 305 0.976073 CCTGTACCCACCCTGTCGAT 60.976 60.000 0.00 0.00 0.00 3.59
297 306 1.608336 CCTGTACCCACCCTGTCGA 60.608 63.158 0.00 0.00 0.00 4.20
298 307 1.189524 TTCCTGTACCCACCCTGTCG 61.190 60.000 0.00 0.00 0.00 4.35
299 308 1.061546 TTTCCTGTACCCACCCTGTC 58.938 55.000 0.00 0.00 0.00 3.51
300 309 1.423921 CTTTTCCTGTACCCACCCTGT 59.576 52.381 0.00 0.00 0.00 4.00
301 310 1.886655 GCTTTTCCTGTACCCACCCTG 60.887 57.143 0.00 0.00 0.00 4.45
302 311 0.404426 GCTTTTCCTGTACCCACCCT 59.596 55.000 0.00 0.00 0.00 4.34
303 312 0.958876 CGCTTTTCCTGTACCCACCC 60.959 60.000 0.00 0.00 0.00 4.61
304 313 0.035739 TCGCTTTTCCTGTACCCACC 59.964 55.000 0.00 0.00 0.00 4.61
305 314 1.439679 CTCGCTTTTCCTGTACCCAC 58.560 55.000 0.00 0.00 0.00 4.61
306 315 0.323629 CCTCGCTTTTCCTGTACCCA 59.676 55.000 0.00 0.00 0.00 4.51
307 316 1.025113 GCCTCGCTTTTCCTGTACCC 61.025 60.000 0.00 0.00 0.00 3.69
308 317 1.025113 GGCCTCGCTTTTCCTGTACC 61.025 60.000 0.00 0.00 0.00 3.34
309 318 0.036294 AGGCCTCGCTTTTCCTGTAC 60.036 55.000 0.00 0.00 0.00 2.90
310 319 0.036388 CAGGCCTCGCTTTTCCTGTA 60.036 55.000 0.00 0.00 40.79 2.74
311 320 1.302832 CAGGCCTCGCTTTTCCTGT 60.303 57.895 0.00 0.00 40.79 4.00
312 321 3.583383 CAGGCCTCGCTTTTCCTG 58.417 61.111 0.00 0.00 39.95 3.86
313 322 0.606673 GAACAGGCCTCGCTTTTCCT 60.607 55.000 0.00 0.00 0.00 3.36
314 323 0.606673 AGAACAGGCCTCGCTTTTCC 60.607 55.000 0.00 0.00 0.00 3.13
315 324 0.519077 CAGAACAGGCCTCGCTTTTC 59.481 55.000 0.00 0.55 0.00 2.29
316 325 0.179018 ACAGAACAGGCCTCGCTTTT 60.179 50.000 0.00 0.00 0.00 2.27
317 326 0.685097 TACAGAACAGGCCTCGCTTT 59.315 50.000 0.00 0.00 0.00 3.51
318 327 0.247736 CTACAGAACAGGCCTCGCTT 59.752 55.000 0.00 0.00 0.00 4.68
319 328 1.608717 CCTACAGAACAGGCCTCGCT 61.609 60.000 0.00 0.00 0.00 4.93
320 329 1.153549 CCTACAGAACAGGCCTCGC 60.154 63.158 0.00 0.00 0.00 5.03
321 330 0.608640 AACCTACAGAACAGGCCTCG 59.391 55.000 0.00 0.52 36.57 4.63
322 331 1.404315 CGAACCTACAGAACAGGCCTC 60.404 57.143 0.00 0.00 36.57 4.70
323 332 0.608640 CGAACCTACAGAACAGGCCT 59.391 55.000 0.00 0.00 36.57 5.19
324 333 0.391263 CCGAACCTACAGAACAGGCC 60.391 60.000 0.00 0.00 36.57 5.19
325 334 0.391263 CCCGAACCTACAGAACAGGC 60.391 60.000 0.00 0.00 36.57 4.85
326 335 0.974383 ACCCGAACCTACAGAACAGG 59.026 55.000 0.00 0.00 39.25 4.00
327 336 2.833631 AACCCGAACCTACAGAACAG 57.166 50.000 0.00 0.00 0.00 3.16
328 337 4.895668 AATAACCCGAACCTACAGAACA 57.104 40.909 0.00 0.00 0.00 3.18
329 338 4.393990 CCAAATAACCCGAACCTACAGAAC 59.606 45.833 0.00 0.00 0.00 3.01
330 339 4.041938 ACCAAATAACCCGAACCTACAGAA 59.958 41.667 0.00 0.00 0.00 3.02
331 340 3.583966 ACCAAATAACCCGAACCTACAGA 59.416 43.478 0.00 0.00 0.00 3.41
332 341 3.946606 ACCAAATAACCCGAACCTACAG 58.053 45.455 0.00 0.00 0.00 2.74
333 342 4.370094 AACCAAATAACCCGAACCTACA 57.630 40.909 0.00 0.00 0.00 2.74
334 343 7.395190 AAATAACCAAATAACCCGAACCTAC 57.605 36.000 0.00 0.00 0.00 3.18
335 344 6.315891 CGAAATAACCAAATAACCCGAACCTA 59.684 38.462 0.00 0.00 0.00 3.08
336 345 5.124297 CGAAATAACCAAATAACCCGAACCT 59.876 40.000 0.00 0.00 0.00 3.50
337 346 5.334319 CGAAATAACCAAATAACCCGAACC 58.666 41.667 0.00 0.00 0.00 3.62
338 347 5.106197 ACCGAAATAACCAAATAACCCGAAC 60.106 40.000 0.00 0.00 0.00 3.95
339 348 5.008980 ACCGAAATAACCAAATAACCCGAA 58.991 37.500 0.00 0.00 0.00 4.30
340 349 4.587891 ACCGAAATAACCAAATAACCCGA 58.412 39.130 0.00 0.00 0.00 5.14
341 350 4.968812 ACCGAAATAACCAAATAACCCG 57.031 40.909 0.00 0.00 0.00 5.28
342 351 7.068470 TGGATAACCGAAATAACCAAATAACCC 59.932 37.037 0.00 0.00 39.42 4.11
343 352 7.998580 TGGATAACCGAAATAACCAAATAACC 58.001 34.615 0.00 0.00 39.42 2.85
344 353 8.132995 CCTGGATAACCGAAATAACCAAATAAC 58.867 37.037 0.00 0.00 39.42 1.89
345 354 7.835181 ACCTGGATAACCGAAATAACCAAATAA 59.165 33.333 0.00 0.00 39.42 1.40
346 355 7.283580 CACCTGGATAACCGAAATAACCAAATA 59.716 37.037 0.00 0.00 39.42 1.40
347 356 6.096282 CACCTGGATAACCGAAATAACCAAAT 59.904 38.462 0.00 0.00 39.42 2.32
348 357 5.416326 CACCTGGATAACCGAAATAACCAAA 59.584 40.000 0.00 0.00 39.42 3.28
349 358 4.944930 CACCTGGATAACCGAAATAACCAA 59.055 41.667 0.00 0.00 39.42 3.67
350 359 4.519213 CACCTGGATAACCGAAATAACCA 58.481 43.478 0.00 0.00 39.42 3.67
351 360 3.314357 GCACCTGGATAACCGAAATAACC 59.686 47.826 0.00 0.00 39.42 2.85
352 361 4.196971 AGCACCTGGATAACCGAAATAAC 58.803 43.478 0.00 0.00 39.42 1.89
353 362 4.497291 AGCACCTGGATAACCGAAATAA 57.503 40.909 0.00 0.00 39.42 1.40
354 363 5.617528 TTAGCACCTGGATAACCGAAATA 57.382 39.130 0.00 0.00 39.42 1.40
355 364 4.497291 TTAGCACCTGGATAACCGAAAT 57.503 40.909 0.00 0.00 39.42 2.17
356 365 3.985019 TTAGCACCTGGATAACCGAAA 57.015 42.857 0.00 0.00 39.42 3.46
357 366 3.985019 TTTAGCACCTGGATAACCGAA 57.015 42.857 0.00 0.00 39.42 4.30
358 367 3.602483 GTTTTAGCACCTGGATAACCGA 58.398 45.455 0.00 0.00 39.42 4.69
359 368 2.681344 GGTTTTAGCACCTGGATAACCG 59.319 50.000 0.00 0.00 39.42 4.44
360 369 2.681344 CGGTTTTAGCACCTGGATAACC 59.319 50.000 0.00 3.85 34.22 2.85
361 370 3.602483 TCGGTTTTAGCACCTGGATAAC 58.398 45.455 0.00 0.00 34.22 1.89
362 371 3.985019 TCGGTTTTAGCACCTGGATAA 57.015 42.857 0.00 0.00 34.22 1.75
363 372 3.985019 TTCGGTTTTAGCACCTGGATA 57.015 42.857 0.00 0.00 34.22 2.59
364 373 2.871096 TTCGGTTTTAGCACCTGGAT 57.129 45.000 0.00 0.00 34.22 3.41
365 374 2.642154 TTTCGGTTTTAGCACCTGGA 57.358 45.000 0.00 0.00 34.22 3.86
366 375 3.934457 AATTTCGGTTTTAGCACCTGG 57.066 42.857 0.00 0.00 34.22 4.45
367 376 5.180492 TCTGTAATTTCGGTTTTAGCACCTG 59.820 40.000 0.00 0.00 34.22 4.00
368 377 5.310451 TCTGTAATTTCGGTTTTAGCACCT 58.690 37.500 0.00 0.00 34.22 4.00
369 378 5.616488 TCTGTAATTTCGGTTTTAGCACC 57.384 39.130 0.00 0.00 0.00 5.01
370 379 9.615295 TTTATTCTGTAATTTCGGTTTTAGCAC 57.385 29.630 0.00 0.00 0.00 4.40
382 391 9.353999 GCAGAACCGAAATTTATTCTGTAATTT 57.646 29.630 25.35 0.00 46.39 1.82
383 392 8.519526 TGCAGAACCGAAATTTATTCTGTAATT 58.480 29.630 25.35 0.00 46.39 1.40
384 393 8.050778 TGCAGAACCGAAATTTATTCTGTAAT 57.949 30.769 25.35 3.39 46.39 1.89
385 394 7.441890 TGCAGAACCGAAATTTATTCTGTAA 57.558 32.000 25.35 17.64 46.39 2.41
386 395 7.441890 TTGCAGAACCGAAATTTATTCTGTA 57.558 32.000 25.35 21.91 46.39 2.74
387 396 5.957842 TGCAGAACCGAAATTTATTCTGT 57.042 34.783 25.35 4.70 46.39 3.41
389 398 8.711457 CAAATTTGCAGAACCGAAATTTATTCT 58.289 29.630 5.01 6.16 37.24 2.40
390 399 8.707839 TCAAATTTGCAGAACCGAAATTTATTC 58.292 29.630 13.54 0.00 37.24 1.75
391 400 8.495148 GTCAAATTTGCAGAACCGAAATTTATT 58.505 29.630 13.54 0.00 37.24 1.40
392 401 7.655328 TGTCAAATTTGCAGAACCGAAATTTAT 59.345 29.630 13.54 0.00 37.24 1.40
393 402 6.980978 TGTCAAATTTGCAGAACCGAAATTTA 59.019 30.769 13.54 0.00 37.24 1.40
394 403 5.814705 TGTCAAATTTGCAGAACCGAAATTT 59.185 32.000 13.54 0.00 38.98 1.82
395 404 5.355596 TGTCAAATTTGCAGAACCGAAATT 58.644 33.333 13.54 0.00 32.01 1.82
396 405 4.942852 TGTCAAATTTGCAGAACCGAAAT 58.057 34.783 13.54 0.00 0.00 2.17
397 406 4.377839 TGTCAAATTTGCAGAACCGAAA 57.622 36.364 13.54 0.00 0.00 3.46
398 407 4.109050 GTTGTCAAATTTGCAGAACCGAA 58.891 39.130 13.54 0.00 0.00 4.30
399 408 3.490078 GGTTGTCAAATTTGCAGAACCGA 60.490 43.478 22.01 6.29 29.47 4.69
400 409 2.794350 GGTTGTCAAATTTGCAGAACCG 59.206 45.455 22.01 0.00 29.47 4.44
401 410 2.794350 CGGTTGTCAAATTTGCAGAACC 59.206 45.455 24.21 24.21 33.04 3.62
402 411 3.701241 TCGGTTGTCAAATTTGCAGAAC 58.299 40.909 13.54 14.96 0.00 3.01
403 412 4.377839 TTCGGTTGTCAAATTTGCAGAA 57.622 36.364 13.54 8.75 0.00 3.02
404 413 4.377839 TTTCGGTTGTCAAATTTGCAGA 57.622 36.364 13.54 3.11 0.00 4.26
405 414 5.345741 CCTATTTCGGTTGTCAAATTTGCAG 59.654 40.000 13.54 0.73 0.00 4.41
406 415 5.010112 TCCTATTTCGGTTGTCAAATTTGCA 59.990 36.000 13.54 11.56 0.00 4.08
407 416 5.465935 TCCTATTTCGGTTGTCAAATTTGC 58.534 37.500 13.54 9.16 0.00 3.68
408 417 6.364976 GGTTCCTATTTCGGTTGTCAAATTTG 59.635 38.462 12.15 12.15 0.00 2.32
409 418 6.266786 AGGTTCCTATTTCGGTTGTCAAATTT 59.733 34.615 0.00 0.00 0.00 1.82
410 419 5.773176 AGGTTCCTATTTCGGTTGTCAAATT 59.227 36.000 0.00 0.00 0.00 1.82
411 420 5.321927 AGGTTCCTATTTCGGTTGTCAAAT 58.678 37.500 0.00 0.00 0.00 2.32
412 421 4.721132 AGGTTCCTATTTCGGTTGTCAAA 58.279 39.130 0.00 0.00 0.00 2.69
413 422 4.360951 AGGTTCCTATTTCGGTTGTCAA 57.639 40.909 0.00 0.00 0.00 3.18
414 423 5.486735 TTAGGTTCCTATTTCGGTTGTCA 57.513 39.130 0.00 0.00 0.00 3.58
415 424 6.997239 ATTTAGGTTCCTATTTCGGTTGTC 57.003 37.500 0.00 0.00 0.00 3.18
416 425 7.770366 AAATTTAGGTTCCTATTTCGGTTGT 57.230 32.000 0.00 0.00 0.00 3.32
417 426 7.483691 CGAAAATTTAGGTTCCTATTTCGGTTG 59.516 37.037 23.65 8.47 42.09 3.77
418 427 7.532571 CGAAAATTTAGGTTCCTATTTCGGTT 58.467 34.615 23.65 8.01 42.09 4.44
419 428 7.080353 CGAAAATTTAGGTTCCTATTTCGGT 57.920 36.000 23.65 4.72 42.09 4.69
421 430 7.080353 ACCGAAAATTTAGGTTCCTATTTCG 57.920 36.000 24.04 24.04 44.11 3.46
422 431 9.350357 GAAACCGAAAATTTAGGTTCCTATTTC 57.650 33.333 20.53 11.39 46.45 2.17
423 432 8.024865 CGAAACCGAAAATTTAGGTTCCTATTT 58.975 33.333 20.53 6.85 46.45 1.40
424 433 7.362315 CCGAAACCGAAAATTTAGGTTCCTATT 60.362 37.037 20.53 7.48 46.45 1.73
425 434 6.094464 CCGAAACCGAAAATTTAGGTTCCTAT 59.906 38.462 20.53 7.81 46.45 2.57
426 435 5.412286 CCGAAACCGAAAATTTAGGTTCCTA 59.588 40.000 20.53 0.00 46.45 2.94
427 436 4.216902 CCGAAACCGAAAATTTAGGTTCCT 59.783 41.667 20.53 8.77 46.45 3.36
428 437 4.478699 CCGAAACCGAAAATTTAGGTTCC 58.521 43.478 20.53 9.87 46.45 3.62
429 438 3.916172 GCCGAAACCGAAAATTTAGGTTC 59.084 43.478 20.53 13.82 46.45 3.62
431 440 2.229543 GGCCGAAACCGAAAATTTAGGT 59.770 45.455 4.65 4.65 40.50 3.08
432 441 2.416296 GGGCCGAAACCGAAAATTTAGG 60.416 50.000 3.27 3.27 35.56 2.69
433 442 2.416296 GGGGCCGAAACCGAAAATTTAG 60.416 50.000 0.00 0.00 0.00 1.85
434 443 1.545136 GGGGCCGAAACCGAAAATTTA 59.455 47.619 0.00 0.00 0.00 1.40
435 444 0.319083 GGGGCCGAAACCGAAAATTT 59.681 50.000 0.00 0.00 0.00 1.82
436 445 1.969085 GGGGCCGAAACCGAAAATT 59.031 52.632 0.00 0.00 0.00 1.82
437 446 3.689414 GGGGCCGAAACCGAAAAT 58.311 55.556 0.00 0.00 0.00 1.82
443 452 0.966875 AAATAACCGGGGCCGAAACC 60.967 55.000 6.32 0.00 42.83 3.27
444 453 0.452987 GAAATAACCGGGGCCGAAAC 59.547 55.000 6.32 0.00 42.83 2.78
445 454 1.025647 CGAAATAACCGGGGCCGAAA 61.026 55.000 6.32 0.00 42.83 3.46
446 455 1.449956 CGAAATAACCGGGGCCGAA 60.450 57.895 6.32 0.00 42.83 4.30
447 456 2.187424 CGAAATAACCGGGGCCGA 59.813 61.111 6.32 0.00 42.83 5.54
448 457 2.898343 CCGAAATAACCGGGGCCG 60.898 66.667 6.32 0.00 43.05 6.13
454 463 0.095762 GCACCGAACCGAAATAACCG 59.904 55.000 0.00 0.00 0.00 4.44
455 464 1.158434 TGCACCGAACCGAAATAACC 58.842 50.000 0.00 0.00 0.00 2.85
456 465 2.536130 CGATGCACCGAACCGAAATAAC 60.536 50.000 0.00 0.00 0.00 1.89
457 466 1.661617 CGATGCACCGAACCGAAATAA 59.338 47.619 0.00 0.00 0.00 1.40
458 467 1.282817 CGATGCACCGAACCGAAATA 58.717 50.000 0.00 0.00 0.00 1.40
459 468 1.366111 CCGATGCACCGAACCGAAAT 61.366 55.000 0.00 0.00 0.00 2.17
460 469 2.030401 CCGATGCACCGAACCGAAA 61.030 57.895 0.00 0.00 0.00 3.46
461 470 2.433491 CCGATGCACCGAACCGAA 60.433 61.111 0.00 0.00 0.00 4.30
462 471 3.636313 GACCGATGCACCGAACCGA 62.636 63.158 0.00 0.00 0.00 4.69
463 472 3.186047 GACCGATGCACCGAACCG 61.186 66.667 0.00 0.00 0.00 4.44
464 473 2.818274 GGACCGATGCACCGAACC 60.818 66.667 0.00 0.05 0.00 3.62
465 474 1.810030 GAGGACCGATGCACCGAAC 60.810 63.158 0.00 0.00 0.00 3.95
466 475 2.577059 GAGGACCGATGCACCGAA 59.423 61.111 0.00 0.00 0.00 4.30
467 476 3.458163 GGAGGACCGATGCACCGA 61.458 66.667 0.00 0.00 0.00 4.69
477 486 1.418637 TGGCCATATTAACGGAGGACC 59.581 52.381 0.00 0.00 0.00 4.46
478 487 2.490991 GTGGCCATATTAACGGAGGAC 58.509 52.381 9.72 0.00 0.00 3.85
479 488 1.418637 GGTGGCCATATTAACGGAGGA 59.581 52.381 9.72 0.00 0.00 3.71
480 489 1.544759 GGGTGGCCATATTAACGGAGG 60.545 57.143 9.72 0.00 0.00 4.30
481 490 1.544759 GGGGTGGCCATATTAACGGAG 60.545 57.143 9.72 0.00 0.00 4.63
482 491 0.475044 GGGGTGGCCATATTAACGGA 59.525 55.000 9.72 0.00 0.00 4.69
483 492 0.476771 AGGGGTGGCCATATTAACGG 59.523 55.000 9.72 0.00 0.00 4.44
484 493 2.370849 AGTAGGGGTGGCCATATTAACG 59.629 50.000 9.72 0.00 0.00 3.18
485 494 4.348754 TGTAGTAGGGGTGGCCATATTAAC 59.651 45.833 9.72 5.49 0.00 2.01
486 495 4.568879 TGTAGTAGGGGTGGCCATATTAA 58.431 43.478 9.72 0.00 0.00 1.40
487 496 4.140639 TCTGTAGTAGGGGTGGCCATATTA 60.141 45.833 9.72 0.00 0.00 0.98
488 497 2.979678 CTGTAGTAGGGGTGGCCATATT 59.020 50.000 9.72 0.00 0.00 1.28
489 498 2.181419 TCTGTAGTAGGGGTGGCCATAT 59.819 50.000 9.72 0.00 0.00 1.78
490 499 1.576757 TCTGTAGTAGGGGTGGCCATA 59.423 52.381 9.72 0.00 0.00 2.74
491 500 0.341961 TCTGTAGTAGGGGTGGCCAT 59.658 55.000 9.72 0.00 0.00 4.40
492 501 0.341961 ATCTGTAGTAGGGGTGGCCA 59.658 55.000 0.00 0.00 0.00 5.36
493 502 2.393630 TATCTGTAGTAGGGGTGGCC 57.606 55.000 0.00 0.00 0.00 5.36
494 503 3.507411 TGATATCTGTAGTAGGGGTGGC 58.493 50.000 3.98 0.00 0.00 5.01
495 504 5.361285 GCTATGATATCTGTAGTAGGGGTGG 59.639 48.000 3.98 0.00 0.00 4.61
496 505 5.361285 GGCTATGATATCTGTAGTAGGGGTG 59.639 48.000 3.98 0.00 0.00 4.61
497 506 5.256626 AGGCTATGATATCTGTAGTAGGGGT 59.743 44.000 3.98 0.00 0.00 4.95
498 507 5.772004 AGGCTATGATATCTGTAGTAGGGG 58.228 45.833 3.98 0.00 0.00 4.79
499 508 6.483974 CGTAGGCTATGATATCTGTAGTAGGG 59.516 46.154 8.06 0.00 0.00 3.53
500 509 7.225145 GTCGTAGGCTATGATATCTGTAGTAGG 59.775 44.444 18.82 3.25 0.00 3.18
501 510 7.225145 GGTCGTAGGCTATGATATCTGTAGTAG 59.775 44.444 18.82 0.92 0.00 2.57
502 511 7.046652 GGTCGTAGGCTATGATATCTGTAGTA 58.953 42.308 18.82 0.00 0.00 1.82
503 512 5.881443 GGTCGTAGGCTATGATATCTGTAGT 59.119 44.000 18.82 0.00 0.00 2.73
504 513 6.116806 AGGTCGTAGGCTATGATATCTGTAG 58.883 44.000 18.82 7.64 0.00 2.74
505 514 6.063496 AGGTCGTAGGCTATGATATCTGTA 57.937 41.667 18.82 0.00 0.00 2.74
506 515 4.924625 AGGTCGTAGGCTATGATATCTGT 58.075 43.478 18.82 0.00 0.00 3.41
513 522 1.590932 GTCGAGGTCGTAGGCTATGA 58.409 55.000 12.38 12.38 40.80 2.15
548 558 1.838073 CTTGGAGCTAACGGGGTGGT 61.838 60.000 0.00 0.00 0.00 4.16
709 741 2.284405 TTCCCTGTCCCTCCGTCC 60.284 66.667 0.00 0.00 0.00 4.79
720 752 1.448540 CGCCACTGCTAGTTCCCTG 60.449 63.158 0.00 0.00 34.43 4.45
759 1670 2.668212 CGAAAGGAGGCAACCGCA 60.668 61.111 0.00 0.00 41.24 5.69
765 1676 2.032528 CACAGGCGAAAGGAGGCA 59.967 61.111 0.00 0.00 36.55 4.75
813 2275 0.815615 CTGGTCTATTCAAGGCGCCC 60.816 60.000 26.15 5.07 0.00 6.13
814 2276 0.178068 TCTGGTCTATTCAAGGCGCC 59.822 55.000 21.89 21.89 0.00 6.53
818 2280 8.970859 ATTTTACTGATCTGGTCTATTCAAGG 57.029 34.615 4.49 0.00 0.00 3.61
859 2386 5.961843 CGTCATTTCATATGAGCACTTCAAC 59.038 40.000 5.39 0.00 39.77 3.18
1154 7474 0.531200 GTTGACGAGGTAGTCCTGGG 59.469 60.000 0.00 0.00 45.24 4.45
1469 7789 2.017049 CGAACAATGGGATCCAGAACC 58.983 52.381 15.23 0.00 36.75 3.62
1503 7823 1.671054 CGACACGGCCTTGACCAAT 60.671 57.895 17.43 0.00 0.00 3.16
1569 7889 1.571215 CGACGTTGGGCTTAACCACC 61.571 60.000 0.00 0.00 41.03 4.61
1728 8048 0.385029 GCGCATACATGAATTGGCCA 59.615 50.000 0.00 0.00 0.00 5.36
1752 8072 1.153881 GGTTACGCAGGAGACGGTC 60.154 63.158 0.00 0.00 34.00 4.79
1784 8104 4.997395 TCTTCAGTAACTCCATTCTTGCAC 59.003 41.667 0.00 0.00 0.00 4.57
1923 8243 0.888619 TGTACTCTGGCTCAAGACCG 59.111 55.000 0.00 0.00 0.00 4.79
1989 8309 0.389296 TGACAATGTACCGAGGCACG 60.389 55.000 0.00 0.00 42.18 5.34
2021 8341 1.301293 CTCAGAAGTCCCTTGCCCC 59.699 63.158 0.00 0.00 0.00 5.80
2056 8376 0.805322 ATCTCGCTCGCAGAAAGCAG 60.805 55.000 0.00 0.00 46.13 4.24
2059 8379 1.849219 GTACATCTCGCTCGCAGAAAG 59.151 52.381 0.00 0.00 34.09 2.62
2062 8382 1.064208 GAAGTACATCTCGCTCGCAGA 59.936 52.381 0.00 0.00 0.00 4.26
2075 8395 7.118680 GGTCGATAAACCTTGATTTGAAGTACA 59.881 37.037 0.00 0.00 36.32 2.90
2085 8405 5.075858 TGTAACGGTCGATAAACCTTGAT 57.924 39.130 0.00 0.00 37.15 2.57
2101 8421 3.005472 TCAGGAACACTCTCCTTGTAACG 59.995 47.826 0.00 0.00 43.76 3.18
2102 8422 4.561105 CTCAGGAACACTCTCCTTGTAAC 58.439 47.826 0.00 0.00 43.76 2.50
2251 8578 8.674263 AATGCTAAAATGAAGAGAGGATACAG 57.326 34.615 0.00 0.00 41.41 2.74
2371 8699 7.830099 TCACTTGCTTCATAGATAGAGATGA 57.170 36.000 0.00 0.00 0.00 2.92
2406 8755 8.586570 TCAATTTCATGATGTTTTACCACAAC 57.413 30.769 0.00 0.00 0.00 3.32
2415 8764 9.985730 AATACAACACTCAATTTCATGATGTTT 57.014 25.926 5.98 2.61 33.15 2.83
2430 8779 3.064207 TCCAACAGCGAATACAACACTC 58.936 45.455 0.00 0.00 0.00 3.51
2451 8800 1.098050 GAGCCATCCATTTTCAGCGT 58.902 50.000 0.00 0.00 0.00 5.07
2462 8811 1.696832 GCGTTTGTCGAGAGCCATCC 61.697 60.000 0.00 0.00 42.86 3.51
2474 8823 2.157834 TACAGATTCACGGCGTTTGT 57.842 45.000 11.19 12.41 0.00 2.83
2511 8864 5.947566 AGTTTTATACCCAATAAACAGCCGT 59.052 36.000 0.00 0.00 39.28 5.68
2514 8867 8.520351 ACAGAAGTTTTATACCCAATAAACAGC 58.480 33.333 0.00 0.00 39.28 4.40
2554 8907 0.030603 ATCTCCCTCCCTCTCAACCC 60.031 60.000 0.00 0.00 0.00 4.11
2571 8924 3.427161 GCAAAAGGCACTACATCCATC 57.573 47.619 0.00 0.00 38.49 3.51
2589 8942 3.243367 CCGACCAAATCAGTGAAAAAGCA 60.243 43.478 0.00 0.00 0.00 3.91
2590 8943 3.004315 TCCGACCAAATCAGTGAAAAAGC 59.996 43.478 0.00 0.00 0.00 3.51
2598 8951 3.551846 AGTTTTGTCCGACCAAATCAGT 58.448 40.909 1.45 0.00 34.50 3.41
2599 8952 4.290155 CAAGTTTTGTCCGACCAAATCAG 58.710 43.478 1.45 0.00 34.50 2.90
2606 8959 2.018515 TCAACCAAGTTTTGTCCGACC 58.981 47.619 0.00 0.00 0.00 4.79
2608 8961 3.563808 CAGATCAACCAAGTTTTGTCCGA 59.436 43.478 0.00 0.00 0.00 4.55
2611 8964 6.317789 TGATCAGATCAACCAAGTTTTGTC 57.682 37.500 10.93 0.00 36.11 3.18
2654 9044 2.945668 CACCCTATACCTTGCTCAAAGC 59.054 50.000 0.00 0.00 42.82 3.51
2674 9064 1.263356 CCCTAGAAACTCCCGTGACA 58.737 55.000 0.00 0.00 0.00 3.58
2680 9070 0.624254 CCCCAACCCTAGAAACTCCC 59.376 60.000 0.00 0.00 0.00 4.30
2690 9080 2.936032 GCAGAGGACCCCAACCCT 60.936 66.667 0.00 0.00 35.02 4.34
2709 9099 0.250295 TCAGAACTCCACCTTTGCCG 60.250 55.000 0.00 0.00 0.00 5.69
2710 9100 1.609072 GTTCAGAACTCCACCTTTGCC 59.391 52.381 6.00 0.00 0.00 4.52
2711 9101 1.609072 GGTTCAGAACTCCACCTTTGC 59.391 52.381 13.13 0.00 0.00 3.68
2720 9130 1.258676 ACGGAGGAGGTTCAGAACTC 58.741 55.000 13.13 8.38 0.00 3.01
2738 9148 2.361119 GGGGACTCACAAAGTTTCCAAC 59.639 50.000 0.00 0.00 38.74 3.77
2762 9172 3.486875 GCTCAACAATATTTCGGAACCGG 60.487 47.826 13.29 0.00 40.25 5.28
2789 9212 1.475280 CCATGATGCTGTCAGGTTTGG 59.525 52.381 1.14 1.25 40.92 3.28
2799 9222 0.661552 GCAGCTACACCATGATGCTG 59.338 55.000 17.00 17.00 43.72 4.41
2801 9224 0.661552 CAGCAGCTACACCATGATGC 59.338 55.000 0.00 0.00 0.00 3.91
2835 9258 1.085091 CAAGACAGTGATGCAGCTCC 58.915 55.000 2.53 0.00 0.00 4.70
2846 9269 1.614317 GCCCTAACCATGCAAGACAGT 60.614 52.381 0.00 0.00 0.00 3.55
2855 9278 1.816961 GCTGGAGATGCCCTAACCATG 60.817 57.143 0.00 0.00 34.97 3.66
2888 9311 2.267961 CGCTTTTAGACGCCCCCT 59.732 61.111 0.00 0.00 0.00 4.79
2894 9317 2.813908 AGGCGGCGCTTTTAGACG 60.814 61.111 32.30 0.56 0.00 4.18
2895 9318 2.750888 CCAGGCGGCGCTTTTAGAC 61.751 63.158 32.30 13.09 0.00 2.59
2896 9319 2.435938 CCAGGCGGCGCTTTTAGA 60.436 61.111 32.30 0.00 0.00 2.10
2897 9320 3.508840 CCCAGGCGGCGCTTTTAG 61.509 66.667 32.30 14.75 0.00 1.85
2946 9369 4.383602 CGACTGGGCGCAAAACCG 62.384 66.667 10.83 2.69 0.00 4.44
2947 9370 3.249973 GACGACTGGGCGCAAAACC 62.250 63.158 10.83 0.47 33.86 3.27
2948 9371 2.251371 GACGACTGGGCGCAAAAC 59.749 61.111 10.83 0.00 33.86 2.43
2949 9372 3.342627 CGACGACTGGGCGCAAAA 61.343 61.111 10.83 0.00 33.86 2.44
2976 9399 3.976701 ATTTCAGCGCCTGGGGACG 62.977 63.158 15.77 4.23 31.51 4.79
2977 9400 1.678970 AATTTCAGCGCCTGGGGAC 60.679 57.895 15.77 6.03 31.51 4.46
2978 9401 1.678635 CAATTTCAGCGCCTGGGGA 60.679 57.895 15.77 0.00 31.51 4.81
2979 9402 2.713967 CCAATTTCAGCGCCTGGGG 61.714 63.158 2.29 6.36 31.51 4.96
2980 9403 2.887360 CCAATTTCAGCGCCTGGG 59.113 61.111 2.29 0.00 31.51 4.45
2981 9404 2.182537 GCCAATTTCAGCGCCTGG 59.817 61.111 2.29 2.65 31.51 4.45
2982 9405 2.182537 GGCCAATTTCAGCGCCTG 59.817 61.111 2.29 1.50 38.41 4.85
2983 9406 3.070576 GGGCCAATTTCAGCGCCT 61.071 61.111 4.39 0.00 41.35 5.52
2984 9407 3.381136 TGGGCCAATTTCAGCGCC 61.381 61.111 2.13 0.00 40.93 6.53
2985 9408 2.125952 GTGGGCCAATTTCAGCGC 60.126 61.111 8.40 0.00 41.90 5.92
2986 9409 0.318120 AAAGTGGGCCAATTTCAGCG 59.682 50.000 25.03 0.00 24.46 5.18
2987 9410 1.799544 CAAAGTGGGCCAATTTCAGC 58.200 50.000 27.50 4.34 29.07 4.26
2988 9411 1.070445 TGCAAAGTGGGCCAATTTCAG 59.930 47.619 27.50 18.68 29.07 3.02
2989 9412 1.070445 CTGCAAAGTGGGCCAATTTCA 59.930 47.619 27.50 23.82 29.07 2.69
2990 9413 1.799544 CTGCAAAGTGGGCCAATTTC 58.200 50.000 27.50 21.06 29.07 2.17
2991 9414 0.250424 GCTGCAAAGTGGGCCAATTT 60.250 50.000 25.03 25.03 31.76 1.82
2992 9415 1.372307 GCTGCAAAGTGGGCCAATT 59.628 52.632 14.45 14.45 0.00 2.32
2993 9416 2.586293 GGCTGCAAAGTGGGCCAAT 61.586 57.895 8.40 3.05 43.59 3.16
2994 9417 3.233231 GGCTGCAAAGTGGGCCAA 61.233 61.111 8.40 0.00 43.59 4.52
2997 9420 2.115734 AAATGGGCTGCAAAGTGGGC 62.116 55.000 0.50 0.00 0.00 5.36
2998 9421 0.397564 AAAATGGGCTGCAAAGTGGG 59.602 50.000 0.50 0.00 0.00 4.61
2999 9422 1.799544 GAAAATGGGCTGCAAAGTGG 58.200 50.000 0.50 0.00 0.00 4.00
3000 9423 1.421382 CGAAAATGGGCTGCAAAGTG 58.579 50.000 0.50 0.00 0.00 3.16
3001 9424 0.318120 CCGAAAATGGGCTGCAAAGT 59.682 50.000 0.50 0.00 0.00 2.66
3002 9425 3.126729 CCGAAAATGGGCTGCAAAG 57.873 52.632 0.50 0.00 0.00 2.77
3010 9433 2.446282 CGTTTATTCGCCGAAAATGGG 58.554 47.619 2.60 0.00 0.00 4.00
3011 9434 2.446282 CCGTTTATTCGCCGAAAATGG 58.554 47.619 2.60 5.87 34.05 3.16
3012 9435 1.843753 GCCGTTTATTCGCCGAAAATG 59.156 47.619 2.60 0.00 0.00 2.32
3013 9436 1.202211 GGCCGTTTATTCGCCGAAAAT 60.202 47.619 2.60 0.00 0.00 1.82
3014 9437 0.168568 GGCCGTTTATTCGCCGAAAA 59.831 50.000 2.60 0.00 0.00 2.29
3015 9438 1.646624 GGGCCGTTTATTCGCCGAAA 61.647 55.000 2.60 0.00 0.00 3.46
3016 9439 2.107903 GGGCCGTTTATTCGCCGAA 61.108 57.895 0.33 0.33 0.00 4.30
3017 9440 2.512057 GGGCCGTTTATTCGCCGA 60.512 61.111 0.00 0.00 0.00 5.54
3018 9441 0.881159 TATGGGCCGTTTATTCGCCG 60.881 55.000 2.17 0.00 0.00 6.46
3019 9442 1.199097 CATATGGGCCGTTTATTCGCC 59.801 52.381 2.17 0.00 0.00 5.54
3020 9443 1.199097 CCATATGGGCCGTTTATTCGC 59.801 52.381 14.52 0.00 0.00 4.70
3033 9456 1.407437 GGCCTATTCTCGCCCATATGG 60.407 57.143 15.41 15.41 39.39 2.74
3034 9457 2.029838 GGCCTATTCTCGCCCATATG 57.970 55.000 0.00 0.00 39.39 1.78
3040 9463 2.633488 GAATATGGGCCTATTCTCGCC 58.367 52.381 7.02 0.00 44.92 5.54
3041 9464 2.271800 CGAATATGGGCCTATTCTCGC 58.728 52.381 22.26 7.55 36.42 5.03
3042 9465 2.893637 CCGAATATGGGCCTATTCTCG 58.106 52.381 19.45 19.45 36.42 4.04
3043 9466 2.633488 GCCGAATATGGGCCTATTCTC 58.367 52.381 22.26 3.45 44.97 2.87
3044 9467 2.789409 GCCGAATATGGGCCTATTCT 57.211 50.000 22.26 0.00 44.97 2.40
3052 9475 0.661020 GAAACCACGCCGAATATGGG 59.339 55.000 0.00 0.00 37.86 4.00
3053 9476 0.303493 CGAAACCACGCCGAATATGG 59.697 55.000 0.00 0.00 39.57 2.74
3054 9477 0.303493 CCGAAACCACGCCGAATATG 59.697 55.000 0.00 0.00 0.00 1.78
3055 9478 1.433837 GCCGAAACCACGCCGAATAT 61.434 55.000 0.00 0.00 0.00 1.28
3056 9479 2.101835 GCCGAAACCACGCCGAATA 61.102 57.895 0.00 0.00 0.00 1.75
3057 9480 3.428282 GCCGAAACCACGCCGAAT 61.428 61.111 0.00 0.00 0.00 3.34
3061 9484 4.379143 GAACGCCGAAACCACGCC 62.379 66.667 0.00 0.00 0.00 5.68
3062 9485 2.452366 ATTGAACGCCGAAACCACGC 62.452 55.000 0.00 0.00 0.00 5.34
3063 9486 0.040781 AATTGAACGCCGAAACCACG 60.041 50.000 0.00 0.00 0.00 4.94
3064 9487 2.973419 TAATTGAACGCCGAAACCAC 57.027 45.000 0.00 0.00 0.00 4.16
3065 9488 3.075148 TGATAATTGAACGCCGAAACCA 58.925 40.909 0.00 0.00 0.00 3.67
3066 9489 3.750639 TGATAATTGAACGCCGAAACC 57.249 42.857 0.00 0.00 0.00 3.27
3067 9490 4.319901 GTGTTGATAATTGAACGCCGAAAC 59.680 41.667 0.00 0.00 0.00 2.78
3068 9491 4.023963 TGTGTTGATAATTGAACGCCGAAA 60.024 37.500 0.00 0.00 32.66 3.46
3069 9492 3.498777 TGTGTTGATAATTGAACGCCGAA 59.501 39.130 0.00 0.00 32.66 4.30
3070 9493 3.067833 TGTGTTGATAATTGAACGCCGA 58.932 40.909 0.00 0.00 32.66 5.54
3071 9494 3.160545 GTGTGTTGATAATTGAACGCCG 58.839 45.455 0.00 0.00 32.66 6.46
3072 9495 3.911964 GTGTGTGTTGATAATTGAACGCC 59.088 43.478 0.00 0.00 32.66 5.68
3073 9496 4.532276 TGTGTGTGTTGATAATTGAACGC 58.468 39.130 0.00 0.00 33.96 4.84
3074 9497 8.894409 AATATGTGTGTGTTGATAATTGAACG 57.106 30.769 0.00 0.00 0.00 3.95
3081 9504 9.007901 TGTGATGAAATATGTGTGTGTTGATAA 57.992 29.630 0.00 0.00 0.00 1.75
3082 9505 8.558973 TGTGATGAAATATGTGTGTGTTGATA 57.441 30.769 0.00 0.00 0.00 2.15
3083 9506 7.391275 TCTGTGATGAAATATGTGTGTGTTGAT 59.609 33.333 0.00 0.00 0.00 2.57
3084 9507 6.709846 TCTGTGATGAAATATGTGTGTGTTGA 59.290 34.615 0.00 0.00 0.00 3.18
3085 9508 6.901265 TCTGTGATGAAATATGTGTGTGTTG 58.099 36.000 0.00 0.00 0.00 3.33
3086 9509 7.509141 TTCTGTGATGAAATATGTGTGTGTT 57.491 32.000 0.00 0.00 0.00 3.32
3087 9510 7.509141 TTTCTGTGATGAAATATGTGTGTGT 57.491 32.000 0.00 0.00 31.81 3.72
3088 9511 8.800231 TTTTTCTGTGATGAAATATGTGTGTG 57.200 30.769 0.00 0.00 36.07 3.82
3089 9512 9.630098 GATTTTTCTGTGATGAAATATGTGTGT 57.370 29.630 0.00 0.00 36.07 3.72
3090 9513 9.628746 TGATTTTTCTGTGATGAAATATGTGTG 57.371 29.630 0.00 0.00 36.07 3.82
3120 9543 9.915629 TTTGTTGTTGTAGTATTTTGTTGAAGT 57.084 25.926 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.