Multiple sequence alignment - TraesCS7B01G084700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G084700 chr7B 100.000 2665 0 0 1 2665 96584457 96587121 0.000000e+00 4922.0
1 TraesCS7B01G084700 chr7B 94.348 230 9 3 441 666 736039887 736039658 1.520000e-92 350.0
2 TraesCS7B01G084700 chr7B 96.651 209 7 0 445 653 629872945 629873153 5.460000e-92 348.0
3 TraesCS7B01G084700 chr7B 96.651 209 7 0 445 653 709760111 709760319 5.460000e-92 348.0
4 TraesCS7B01G084700 chr7B 92.273 220 13 4 199 416 124235736 124235953 2.580000e-80 309.0
5 TraesCS7B01G084700 chr7B 92.093 215 15 2 200 412 135019506 135019720 4.310000e-78 302.0
6 TraesCS7B01G084700 chr7B 82.051 195 23 6 1154 1336 96600014 96600208 3.550000e-34 156.0
7 TraesCS7B01G084700 chr7D 89.712 1769 135 27 797 2539 134443051 134444798 0.000000e+00 2215.0
8 TraesCS7B01G084700 chr7D 84.737 190 23 6 1124 1307 134450929 134451118 4.530000e-43 185.0
9 TraesCS7B01G084700 chr7D 91.176 136 10 1 2530 2665 134445156 134445289 1.630000e-42 183.0
10 TraesCS7B01G084700 chr7D 84.483 174 21 6 1 169 500813041 500813213 1.640000e-37 167.0
11 TraesCS7B01G084700 chr7A 89.734 1052 64 10 775 1819 133605434 133606448 0.000000e+00 1304.0
12 TraesCS7B01G084700 chr7A 87.643 874 86 11 1812 2665 133614131 133615002 0.000000e+00 996.0
13 TraesCS7B01G084700 chr7A 83.482 224 34 3 198 418 207837329 207837106 3.480000e-49 206.0
14 TraesCS7B01G084700 chr7A 85.965 171 17 7 1154 1317 133624820 133624990 2.730000e-40 176.0
15 TraesCS7B01G084700 chr1B 95.197 229 7 2 442 666 37568565 37568337 2.520000e-95 359.0
16 TraesCS7B01G084700 chr1B 96.279 215 7 1 440 653 660398563 660398777 4.220000e-93 351.0
17 TraesCS7B01G084700 chr1B 87.736 106 8 4 676 780 297293674 297293775 4.660000e-23 119.0
18 TraesCS7B01G084700 chr1B 98.507 67 1 0 715 781 310400254 310400188 4.660000e-23 119.0
19 TraesCS7B01G084700 chr1B 94.737 76 3 1 712 786 660398777 660398852 1.680000e-22 117.0
20 TraesCS7B01G084700 chr6B 94.372 231 9 3 440 666 84923295 84923525 4.220000e-93 351.0
21 TraesCS7B01G084700 chr6B 94.690 226 8 3 445 666 76339096 76338871 5.460000e-92 348.0
22 TraesCS7B01G084700 chr6B 84.302 172 20 4 11 177 236473670 236473839 7.630000e-36 161.0
23 TraesCS7B01G084700 chr4B 94.397 232 8 2 440 666 453049520 453049289 4.220000e-93 351.0
24 TraesCS7B01G084700 chr4B 94.298 228 9 3 443 666 590862205 590861978 1.960000e-91 346.0
25 TraesCS7B01G084700 chr4B 83.036 224 34 4 198 418 534924174 534923952 1.620000e-47 200.0
26 TraesCS7B01G084700 chr4B 89.216 102 4 6 683 778 662928132 662928032 1.300000e-23 121.0
27 TraesCS7B01G084700 chr4B 92.405 79 4 2 715 792 664173065 664172988 7.800000e-21 111.0
28 TraesCS7B01G084700 chr5B 93.304 224 12 2 196 416 504677109 504677332 7.110000e-86 327.0
29 TraesCS7B01G084700 chr5B 88.889 108 4 7 683 784 592201179 592201074 2.790000e-25 126.0
30 TraesCS7B01G084700 chr5B 98.507 67 1 0 715 781 66293199 66293133 4.660000e-23 119.0
31 TraesCS7B01G084700 chr2B 92.035 226 14 2 198 419 572307268 572307493 5.540000e-82 315.0
32 TraesCS7B01G084700 chr2B 91.818 220 15 2 200 416 674504262 674504481 1.200000e-78 303.0
33 TraesCS7B01G084700 chr2B 88.636 220 23 2 197 414 27947333 27947552 1.570000e-67 267.0
34 TraesCS7B01G084700 chr2B 87.943 141 16 1 11 150 665931210 665931350 5.900000e-37 165.0
35 TraesCS7B01G084700 chr2B 96.053 76 2 1 712 786 622186034 622186109 3.600000e-24 122.0
36 TraesCS7B01G084700 chr2B 80.000 125 19 5 660 780 236886175 236886053 1.310000e-13 87.9
37 TraesCS7B01G084700 chr3B 90.826 218 17 2 195 409 369091995 369092212 3.360000e-74 289.0
38 TraesCS7B01G084700 chr3B 86.538 104 9 4 676 778 643265667 643265568 2.800000e-20 110.0
39 TraesCS7B01G084700 chr5D 85.976 164 16 7 11 169 497857245 497857406 4.560000e-38 169.0
40 TraesCS7B01G084700 chr5D 87.413 143 18 0 15 157 451956785 451956643 5.900000e-37 165.0
41 TraesCS7B01G084700 chrUn 85.806 155 19 3 10 163 100626333 100626181 7.630000e-36 161.0
42 TraesCS7B01G084700 chr6A 84.118 170 21 3 11 175 3909647 3909479 2.750000e-35 159.0
43 TraesCS7B01G084700 chr4D 84.024 169 24 3 10 177 301810968 301810802 2.750000e-35 159.0
44 TraesCS7B01G084700 chr2A 81.564 179 31 2 1 177 213411649 213411827 2.140000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G084700 chr7B 96584457 96587121 2664 False 4922 4922 100.000 1 2665 1 chr7B.!!$F1 2664
1 TraesCS7B01G084700 chr7D 134443051 134445289 2238 False 1199 2215 90.444 797 2665 2 chr7D.!!$F3 1868
2 TraesCS7B01G084700 chr7A 133605434 133606448 1014 False 1304 1304 89.734 775 1819 1 chr7A.!!$F1 1044
3 TraesCS7B01G084700 chr7A 133614131 133615002 871 False 996 996 87.643 1812 2665 1 chr7A.!!$F2 853

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
260 261 0.035915 GACCTTCCACCCAGCTTCTC 60.036 60.0 0.0 0.0 0.00 2.87 F
429 430 0.107945 GCCTTAGTCAGAGGTGGCAG 60.108 60.0 0.0 0.0 40.04 4.85 F
443 444 0.109723 TGGCAGGTTTCGTAGGCTTT 59.890 50.0 0.0 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1342 1349 0.179145 CTAAGCCGTACACCTGGTCG 60.179 60.000 0.00 0.0 0.00 4.79 R
1524 1531 1.067565 GCCTTCCCAAAAGCAGCTTAC 60.068 52.381 8.45 0.0 0.00 2.34 R
2307 2334 2.046892 GCGAGTGAGGTGTGCCAT 60.047 61.111 0.00 0.0 37.19 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.949177 TTTGTAGTCTGGTGGCATGT 57.051 45.000 0.00 0.00 0.00 3.21
31 32 2.472695 TTGTAGTCTGGTGGCATGTC 57.527 50.000 0.00 0.00 0.00 3.06
32 33 1.644509 TGTAGTCTGGTGGCATGTCT 58.355 50.000 0.00 0.00 0.00 3.41
33 34 2.815158 TGTAGTCTGGTGGCATGTCTA 58.185 47.619 0.00 0.00 0.00 2.59
34 35 2.760650 TGTAGTCTGGTGGCATGTCTAG 59.239 50.000 0.00 0.00 0.00 2.43
35 36 1.944177 AGTCTGGTGGCATGTCTAGT 58.056 50.000 0.00 0.00 0.00 2.57
36 37 2.260822 AGTCTGGTGGCATGTCTAGTT 58.739 47.619 0.00 0.00 0.00 2.24
37 38 3.441101 AGTCTGGTGGCATGTCTAGTTA 58.559 45.455 0.00 0.00 0.00 2.24
38 39 3.195825 AGTCTGGTGGCATGTCTAGTTAC 59.804 47.826 0.00 0.00 0.00 2.50
39 40 3.195825 GTCTGGTGGCATGTCTAGTTACT 59.804 47.826 0.00 0.00 0.00 2.24
40 41 4.401519 GTCTGGTGGCATGTCTAGTTACTA 59.598 45.833 0.00 0.00 0.00 1.82
41 42 4.645136 TCTGGTGGCATGTCTAGTTACTAG 59.355 45.833 12.85 12.85 35.57 2.57
42 43 4.350245 TGGTGGCATGTCTAGTTACTAGT 58.650 43.478 17.69 0.00 35.72 2.57
43 44 4.159693 TGGTGGCATGTCTAGTTACTAGTG 59.840 45.833 17.69 10.80 35.72 2.74
44 45 4.401519 GGTGGCATGTCTAGTTACTAGTGA 59.598 45.833 17.69 7.30 35.72 3.41
45 46 5.341617 GTGGCATGTCTAGTTACTAGTGAC 58.658 45.833 17.69 9.70 35.72 3.67
46 47 4.095932 TGGCATGTCTAGTTACTAGTGACG 59.904 45.833 17.69 7.91 35.72 4.35
47 48 4.497674 GGCATGTCTAGTTACTAGTGACGG 60.498 50.000 17.69 9.19 35.72 4.79
48 49 4.334759 GCATGTCTAGTTACTAGTGACGGA 59.665 45.833 17.69 11.11 35.72 4.69
49 50 5.008811 GCATGTCTAGTTACTAGTGACGGAT 59.991 44.000 17.69 0.00 35.72 4.18
50 51 6.660722 CATGTCTAGTTACTAGTGACGGATC 58.339 44.000 17.69 9.40 35.72 3.36
51 52 5.737860 TGTCTAGTTACTAGTGACGGATCA 58.262 41.667 17.69 11.22 35.72 2.92
52 53 5.816258 TGTCTAGTTACTAGTGACGGATCAG 59.184 44.000 17.69 6.22 34.75 2.90
53 54 4.815308 TCTAGTTACTAGTGACGGATCAGC 59.185 45.833 17.69 0.00 34.75 4.26
54 55 2.688958 AGTTACTAGTGACGGATCAGCC 59.311 50.000 11.72 0.00 34.75 4.85
55 56 7.256341 CTAGTTACTAGTGACGGATCAGCCG 62.256 52.000 11.01 0.00 45.59 5.52
63 64 4.835927 GGATCAGCCGAACGATGT 57.164 55.556 0.00 0.00 0.00 3.06
64 65 2.301505 GGATCAGCCGAACGATGTG 58.698 57.895 0.00 0.00 0.00 3.21
65 66 0.460284 GGATCAGCCGAACGATGTGT 60.460 55.000 0.00 0.00 0.00 3.72
66 67 0.647410 GATCAGCCGAACGATGTGTG 59.353 55.000 0.00 0.00 0.00 3.82
67 68 0.037326 ATCAGCCGAACGATGTGTGT 60.037 50.000 0.00 0.00 0.00 3.72
68 69 0.943835 TCAGCCGAACGATGTGTGTG 60.944 55.000 0.00 0.00 0.00 3.82
69 70 2.173382 GCCGAACGATGTGTGTGC 59.827 61.111 0.00 0.00 0.00 4.57
70 71 2.603247 GCCGAACGATGTGTGTGCA 61.603 57.895 0.00 0.00 0.00 4.57
71 72 1.911293 GCCGAACGATGTGTGTGCAT 61.911 55.000 0.00 0.00 0.00 3.96
72 73 0.095245 CCGAACGATGTGTGTGCATC 59.905 55.000 0.00 0.00 41.21 3.91
79 80 3.848846 GATGTGTGTGCATCGATGTAG 57.151 47.619 25.47 1.86 36.34 2.74
80 81 2.741759 TGTGTGTGCATCGATGTAGT 57.258 45.000 25.47 0.00 0.00 2.73
81 82 3.038788 TGTGTGTGCATCGATGTAGTT 57.961 42.857 25.47 0.00 0.00 2.24
82 83 2.736192 TGTGTGTGCATCGATGTAGTTG 59.264 45.455 25.47 1.90 0.00 3.16
83 84 1.731709 TGTGTGCATCGATGTAGTTGC 59.268 47.619 25.47 13.06 37.35 4.17
84 85 1.731709 GTGTGCATCGATGTAGTTGCA 59.268 47.619 25.47 15.61 42.44 4.08
85 86 2.352651 GTGTGCATCGATGTAGTTGCAT 59.647 45.455 25.47 0.00 45.08 3.96
86 87 2.352342 TGTGCATCGATGTAGTTGCATG 59.648 45.455 25.47 0.00 45.08 4.06
87 88 2.609002 GTGCATCGATGTAGTTGCATGA 59.391 45.455 25.47 0.00 45.08 3.07
88 89 2.867975 TGCATCGATGTAGTTGCATGAG 59.132 45.455 25.47 0.00 40.59 2.90
89 90 2.868583 GCATCGATGTAGTTGCATGAGT 59.131 45.455 25.47 0.00 36.96 3.41
90 91 3.310774 GCATCGATGTAGTTGCATGAGTT 59.689 43.478 25.47 0.00 36.96 3.01
91 92 4.201851 GCATCGATGTAGTTGCATGAGTTT 60.202 41.667 25.47 0.00 36.96 2.66
92 93 4.926860 TCGATGTAGTTGCATGAGTTTG 57.073 40.909 0.00 0.00 0.00 2.93
93 94 4.314961 TCGATGTAGTTGCATGAGTTTGT 58.685 39.130 0.00 0.00 0.00 2.83
94 95 5.474825 TCGATGTAGTTGCATGAGTTTGTA 58.525 37.500 0.00 0.00 0.00 2.41
95 96 6.106003 TCGATGTAGTTGCATGAGTTTGTAT 58.894 36.000 0.00 0.00 0.00 2.29
96 97 7.262048 TCGATGTAGTTGCATGAGTTTGTATA 58.738 34.615 0.00 0.00 0.00 1.47
97 98 7.435192 TCGATGTAGTTGCATGAGTTTGTATAG 59.565 37.037 0.00 0.00 0.00 1.31
98 99 7.435192 CGATGTAGTTGCATGAGTTTGTATAGA 59.565 37.037 0.00 0.00 0.00 1.98
99 100 9.265901 GATGTAGTTGCATGAGTTTGTATAGAT 57.734 33.333 0.00 0.00 0.00 1.98
100 101 9.618890 ATGTAGTTGCATGAGTTTGTATAGATT 57.381 29.630 0.00 0.00 0.00 2.40
101 102 9.448438 TGTAGTTGCATGAGTTTGTATAGATTT 57.552 29.630 0.00 0.00 0.00 2.17
102 103 9.708222 GTAGTTGCATGAGTTTGTATAGATTTG 57.292 33.333 0.00 0.00 0.00 2.32
103 104 8.565896 AGTTGCATGAGTTTGTATAGATTTGA 57.434 30.769 0.00 0.00 0.00 2.69
104 105 8.671921 AGTTGCATGAGTTTGTATAGATTTGAG 58.328 33.333 0.00 0.00 0.00 3.02
105 106 8.668353 GTTGCATGAGTTTGTATAGATTTGAGA 58.332 33.333 0.00 0.00 0.00 3.27
106 107 8.791327 TGCATGAGTTTGTATAGATTTGAGAA 57.209 30.769 0.00 0.00 0.00 2.87
107 108 9.230122 TGCATGAGTTTGTATAGATTTGAGAAA 57.770 29.630 0.00 0.00 0.00 2.52
122 123 9.471702 AGATTTGAGAAATGATAATTGAGGTGT 57.528 29.630 0.00 0.00 0.00 4.16
123 124 9.727627 GATTTGAGAAATGATAATTGAGGTGTC 57.272 33.333 0.00 0.00 0.00 3.67
124 125 7.630242 TTGAGAAATGATAATTGAGGTGTCC 57.370 36.000 0.00 0.00 0.00 4.02
125 126 5.817296 TGAGAAATGATAATTGAGGTGTCCG 59.183 40.000 0.00 0.00 0.00 4.79
126 127 5.126067 AGAAATGATAATTGAGGTGTCCGG 58.874 41.667 0.00 0.00 0.00 5.14
127 128 4.771114 AATGATAATTGAGGTGTCCGGA 57.229 40.909 0.00 0.00 0.00 5.14
128 129 4.982241 ATGATAATTGAGGTGTCCGGAT 57.018 40.909 7.81 0.00 0.00 4.18
129 130 6.433847 AATGATAATTGAGGTGTCCGGATA 57.566 37.500 7.81 0.10 0.00 2.59
130 131 6.627087 ATGATAATTGAGGTGTCCGGATAT 57.373 37.500 7.81 0.00 0.00 1.63
131 132 7.733773 ATGATAATTGAGGTGTCCGGATATA 57.266 36.000 7.81 0.00 0.00 0.86
132 133 7.547697 TGATAATTGAGGTGTCCGGATATAA 57.452 36.000 7.81 0.00 0.00 0.98
133 134 7.969004 TGATAATTGAGGTGTCCGGATATAAA 58.031 34.615 7.81 0.00 0.00 1.40
134 135 8.602424 TGATAATTGAGGTGTCCGGATATAAAT 58.398 33.333 7.81 0.67 0.00 1.40
135 136 9.449719 GATAATTGAGGTGTCCGGATATAAATT 57.550 33.333 7.81 11.91 0.00 1.82
137 138 8.617290 AATTGAGGTGTCCGGATATAAATTAC 57.383 34.615 7.81 0.00 0.00 1.89
138 139 6.734502 TGAGGTGTCCGGATATAAATTACA 57.265 37.500 7.81 0.00 0.00 2.41
139 140 7.311092 TGAGGTGTCCGGATATAAATTACAT 57.689 36.000 7.81 0.00 0.00 2.29
140 141 7.741785 TGAGGTGTCCGGATATAAATTACATT 58.258 34.615 7.81 0.00 0.00 2.71
141 142 8.872134 TGAGGTGTCCGGATATAAATTACATTA 58.128 33.333 7.81 0.00 0.00 1.90
142 143 9.886132 GAGGTGTCCGGATATAAATTACATTAT 57.114 33.333 7.81 0.00 0.00 1.28
155 156 6.740944 AATTACATTATTTAAGGGGTGCCC 57.259 37.500 0.00 0.00 45.90 5.36
177 178 4.612412 AGTCCGCGGGCGTTTGAA 62.612 61.111 26.29 0.00 37.81 2.69
178 179 3.428282 GTCCGCGGGCGTTTGAAT 61.428 61.111 27.83 0.00 37.81 2.57
179 180 2.670251 TCCGCGGGCGTTTGAATT 60.670 55.556 27.83 0.00 37.81 2.17
180 181 2.257067 CCGCGGGCGTTTGAATTT 59.743 55.556 20.10 0.00 37.81 1.82
181 182 2.085844 CCGCGGGCGTTTGAATTTG 61.086 57.895 20.10 0.00 37.81 2.32
182 183 2.715849 CGCGGGCGTTTGAATTTGC 61.716 57.895 4.64 0.00 34.35 3.68
183 184 2.379634 GCGGGCGTTTGAATTTGCC 61.380 57.895 0.00 0.00 46.82 4.52
187 188 2.368655 GGCGTTTGAATTTGCCATCT 57.631 45.000 0.00 0.00 46.76 2.90
188 189 3.502191 GGCGTTTGAATTTGCCATCTA 57.498 42.857 0.00 0.00 46.76 1.98
189 190 3.438360 GGCGTTTGAATTTGCCATCTAG 58.562 45.455 0.00 0.00 46.76 2.43
190 191 3.128589 GGCGTTTGAATTTGCCATCTAGA 59.871 43.478 0.00 0.00 46.76 2.43
191 192 4.202050 GGCGTTTGAATTTGCCATCTAGAT 60.202 41.667 0.00 0.00 46.76 1.98
192 193 4.736793 GCGTTTGAATTTGCCATCTAGATG 59.263 41.667 23.53 23.53 38.51 2.90
193 194 4.736793 CGTTTGAATTTGCCATCTAGATGC 59.263 41.667 24.81 19.79 37.49 3.91
194 195 5.449588 CGTTTGAATTTGCCATCTAGATGCT 60.450 40.000 24.81 6.74 37.49 3.79
195 196 5.762825 TTGAATTTGCCATCTAGATGCTC 57.237 39.130 24.81 18.34 37.49 4.26
196 197 5.045012 TGAATTTGCCATCTAGATGCTCT 57.955 39.130 24.81 7.31 37.49 4.09
197 198 5.443283 TGAATTTGCCATCTAGATGCTCTT 58.557 37.500 24.81 13.51 37.49 2.85
198 199 6.594744 TGAATTTGCCATCTAGATGCTCTTA 58.405 36.000 24.81 10.34 37.49 2.10
199 200 6.709397 TGAATTTGCCATCTAGATGCTCTTAG 59.291 38.462 24.81 12.51 37.49 2.18
200 201 4.613925 TTGCCATCTAGATGCTCTTAGG 57.386 45.455 24.81 12.10 37.49 2.69
201 202 2.301296 TGCCATCTAGATGCTCTTAGGC 59.699 50.000 24.81 20.57 37.49 3.93
202 203 2.354604 GCCATCTAGATGCTCTTAGGCC 60.355 54.545 24.81 0.00 37.49 5.19
203 204 2.235898 CCATCTAGATGCTCTTAGGCCC 59.764 54.545 24.81 0.00 37.49 5.80
204 205 2.775490 TCTAGATGCTCTTAGGCCCA 57.225 50.000 0.00 0.00 0.00 5.36
205 206 2.603021 TCTAGATGCTCTTAGGCCCAG 58.397 52.381 0.00 0.00 0.00 4.45
206 207 2.091055 TCTAGATGCTCTTAGGCCCAGT 60.091 50.000 0.00 0.00 0.00 4.00
207 208 1.589414 AGATGCTCTTAGGCCCAGTT 58.411 50.000 0.00 0.00 0.00 3.16
208 209 1.488393 AGATGCTCTTAGGCCCAGTTC 59.512 52.381 0.00 0.00 0.00 3.01
209 210 1.488393 GATGCTCTTAGGCCCAGTTCT 59.512 52.381 0.00 0.00 0.00 3.01
210 211 1.362224 TGCTCTTAGGCCCAGTTCTT 58.638 50.000 0.00 0.00 0.00 2.52
211 212 1.705186 TGCTCTTAGGCCCAGTTCTTT 59.295 47.619 0.00 0.00 0.00 2.52
212 213 2.108250 TGCTCTTAGGCCCAGTTCTTTT 59.892 45.455 0.00 0.00 0.00 2.27
213 214 2.489722 GCTCTTAGGCCCAGTTCTTTTG 59.510 50.000 0.00 0.00 0.00 2.44
214 215 3.084786 CTCTTAGGCCCAGTTCTTTTGG 58.915 50.000 0.00 0.00 35.41 3.28
215 216 2.445525 TCTTAGGCCCAGTTCTTTTGGT 59.554 45.455 0.00 0.00 33.73 3.67
216 217 2.579410 TAGGCCCAGTTCTTTTGGTC 57.421 50.000 0.00 0.00 33.73 4.02
217 218 0.537371 AGGCCCAGTTCTTTTGGTCG 60.537 55.000 0.00 0.00 33.73 4.79
218 219 0.536460 GGCCCAGTTCTTTTGGTCGA 60.536 55.000 0.00 0.00 33.73 4.20
219 220 1.534729 GCCCAGTTCTTTTGGTCGAT 58.465 50.000 0.00 0.00 33.73 3.59
220 221 1.886542 GCCCAGTTCTTTTGGTCGATT 59.113 47.619 0.00 0.00 33.73 3.34
221 222 2.095212 GCCCAGTTCTTTTGGTCGATTC 60.095 50.000 0.00 0.00 33.73 2.52
222 223 3.412386 CCCAGTTCTTTTGGTCGATTCT 58.588 45.455 0.00 0.00 33.73 2.40
223 224 3.437049 CCCAGTTCTTTTGGTCGATTCTC 59.563 47.826 0.00 0.00 33.73 2.87
224 225 3.437049 CCAGTTCTTTTGGTCGATTCTCC 59.563 47.826 0.00 0.00 0.00 3.71
225 226 4.319177 CAGTTCTTTTGGTCGATTCTCCT 58.681 43.478 0.00 0.00 0.00 3.69
226 227 5.479306 CAGTTCTTTTGGTCGATTCTCCTA 58.521 41.667 0.00 0.00 0.00 2.94
227 228 5.932303 CAGTTCTTTTGGTCGATTCTCCTAA 59.068 40.000 0.00 0.00 0.00 2.69
228 229 6.426937 CAGTTCTTTTGGTCGATTCTCCTAAA 59.573 38.462 0.00 0.00 0.00 1.85
229 230 6.996282 AGTTCTTTTGGTCGATTCTCCTAAAA 59.004 34.615 0.00 0.00 30.91 1.52
230 231 7.665974 AGTTCTTTTGGTCGATTCTCCTAAAAT 59.334 33.333 0.00 0.00 30.91 1.82
231 232 7.611213 TCTTTTGGTCGATTCTCCTAAAATC 57.389 36.000 0.00 0.00 30.91 2.17
232 233 7.394816 TCTTTTGGTCGATTCTCCTAAAATCT 58.605 34.615 0.00 0.00 32.15 2.40
233 234 7.883311 TCTTTTGGTCGATTCTCCTAAAATCTT 59.117 33.333 0.00 0.00 32.15 2.40
234 235 6.985188 TTGGTCGATTCTCCTAAAATCTTG 57.015 37.500 0.00 0.00 32.15 3.02
235 236 6.294361 TGGTCGATTCTCCTAAAATCTTGA 57.706 37.500 0.00 0.00 32.15 3.02
236 237 6.341316 TGGTCGATTCTCCTAAAATCTTGAG 58.659 40.000 0.00 0.00 32.15 3.02
237 238 6.154534 TGGTCGATTCTCCTAAAATCTTGAGA 59.845 38.462 0.00 0.00 32.15 3.27
238 239 7.042335 GGTCGATTCTCCTAAAATCTTGAGAA 58.958 38.462 3.56 3.56 45.08 2.87
243 244 8.655651 ATTCTCCTAAAATCTTGAGAATCGAC 57.344 34.615 7.57 0.00 46.36 4.20
244 245 6.574350 TCTCCTAAAATCTTGAGAATCGACC 58.426 40.000 0.00 0.00 38.61 4.79
245 246 6.381420 TCTCCTAAAATCTTGAGAATCGACCT 59.619 38.462 0.00 0.00 38.61 3.85
246 247 6.947464 TCCTAAAATCTTGAGAATCGACCTT 58.053 36.000 0.00 0.00 38.61 3.50
247 248 7.042335 TCCTAAAATCTTGAGAATCGACCTTC 58.958 38.462 0.00 0.00 38.61 3.46
248 249 6.258947 CCTAAAATCTTGAGAATCGACCTTCC 59.741 42.308 0.00 0.00 38.61 3.46
249 250 4.826274 AATCTTGAGAATCGACCTTCCA 57.174 40.909 0.00 0.00 38.61 3.53
250 251 3.594603 TCTTGAGAATCGACCTTCCAC 57.405 47.619 0.00 0.00 38.61 4.02
251 252 2.233922 TCTTGAGAATCGACCTTCCACC 59.766 50.000 0.00 0.00 38.61 4.61
252 253 0.902531 TGAGAATCGACCTTCCACCC 59.097 55.000 0.00 0.00 38.61 4.61
253 254 0.902531 GAGAATCGACCTTCCACCCA 59.097 55.000 0.00 0.00 0.00 4.51
254 255 0.905357 AGAATCGACCTTCCACCCAG 59.095 55.000 0.00 0.00 0.00 4.45
255 256 0.744771 GAATCGACCTTCCACCCAGC 60.745 60.000 0.00 0.00 0.00 4.85
256 257 1.201429 AATCGACCTTCCACCCAGCT 61.201 55.000 0.00 0.00 0.00 4.24
257 258 1.201429 ATCGACCTTCCACCCAGCTT 61.201 55.000 0.00 0.00 0.00 3.74
258 259 1.376037 CGACCTTCCACCCAGCTTC 60.376 63.158 0.00 0.00 0.00 3.86
259 260 1.831652 CGACCTTCCACCCAGCTTCT 61.832 60.000 0.00 0.00 0.00 2.85
260 261 0.035915 GACCTTCCACCCAGCTTCTC 60.036 60.000 0.00 0.00 0.00 2.87
261 262 1.301293 CCTTCCACCCAGCTTCTCC 59.699 63.158 0.00 0.00 0.00 3.71
262 263 1.301293 CTTCCACCCAGCTTCTCCC 59.699 63.158 0.00 0.00 0.00 4.30
263 264 2.527951 CTTCCACCCAGCTTCTCCCG 62.528 65.000 0.00 0.00 0.00 5.14
264 265 4.101448 CCACCCAGCTTCTCCCGG 62.101 72.222 0.00 0.00 0.00 5.73
265 266 3.003173 CACCCAGCTTCTCCCGGA 61.003 66.667 0.73 0.00 0.00 5.14
266 267 2.203938 ACCCAGCTTCTCCCGGAA 60.204 61.111 0.73 0.00 0.00 4.30
267 268 1.616628 ACCCAGCTTCTCCCGGAAT 60.617 57.895 0.73 0.00 33.01 3.01
268 269 1.147153 CCCAGCTTCTCCCGGAATC 59.853 63.158 0.73 0.00 33.01 2.52
269 270 1.341156 CCCAGCTTCTCCCGGAATCT 61.341 60.000 0.73 0.00 33.01 2.40
270 271 0.543749 CCAGCTTCTCCCGGAATCTT 59.456 55.000 0.73 0.00 33.01 2.40
271 272 1.661341 CAGCTTCTCCCGGAATCTTG 58.339 55.000 0.73 0.00 33.01 3.02
272 273 1.208052 CAGCTTCTCCCGGAATCTTGA 59.792 52.381 0.73 0.00 33.01 3.02
273 274 1.909302 AGCTTCTCCCGGAATCTTGAA 59.091 47.619 0.73 0.00 33.01 2.69
274 275 2.010497 GCTTCTCCCGGAATCTTGAAC 58.990 52.381 0.73 0.00 33.01 3.18
275 276 2.633488 CTTCTCCCGGAATCTTGAACC 58.367 52.381 0.73 0.00 33.01 3.62
276 277 0.909623 TCTCCCGGAATCTTGAACCC 59.090 55.000 0.73 0.00 0.00 4.11
277 278 0.618458 CTCCCGGAATCTTGAACCCA 59.382 55.000 0.73 0.00 0.00 4.51
278 279 1.212935 CTCCCGGAATCTTGAACCCAT 59.787 52.381 0.73 0.00 0.00 4.00
279 280 2.438021 CTCCCGGAATCTTGAACCCATA 59.562 50.000 0.73 0.00 0.00 2.74
280 281 3.053077 TCCCGGAATCTTGAACCCATAT 58.947 45.455 0.73 0.00 0.00 1.78
281 282 3.461831 TCCCGGAATCTTGAACCCATATT 59.538 43.478 0.73 0.00 0.00 1.28
282 283 4.079443 TCCCGGAATCTTGAACCCATATTT 60.079 41.667 0.73 0.00 0.00 1.40
283 284 4.649218 CCCGGAATCTTGAACCCATATTTT 59.351 41.667 0.73 0.00 0.00 1.82
284 285 5.128663 CCCGGAATCTTGAACCCATATTTTT 59.871 40.000 0.73 0.00 0.00 1.94
355 356 9.918630 AAAAATATGTGTTCAAGATTCTGGAAG 57.081 29.630 3.62 0.00 0.00 3.46
356 357 8.868522 AAATATGTGTTCAAGATTCTGGAAGA 57.131 30.769 3.62 0.00 44.68 2.87
365 366 4.998839 TCTGGAAGAAGCTGGGGA 57.001 55.556 0.00 0.00 42.31 4.81
366 367 2.689073 TCTGGAAGAAGCTGGGGAG 58.311 57.895 0.00 0.00 42.31 4.30
367 368 0.911525 TCTGGAAGAAGCTGGGGAGG 60.912 60.000 0.00 0.00 42.31 4.30
368 369 2.273776 GGAAGAAGCTGGGGAGGC 59.726 66.667 0.00 0.00 0.00 4.70
369 370 2.273776 GAAGAAGCTGGGGAGGCC 59.726 66.667 0.00 0.00 0.00 5.19
370 371 3.342477 AAGAAGCTGGGGAGGCCC 61.342 66.667 0.00 0.00 44.51 5.80
375 376 4.570874 GCTGGGGAGGCCCGATTC 62.571 72.222 0.00 0.00 46.66 2.52
376 377 2.770048 CTGGGGAGGCCCGATTCT 60.770 66.667 0.00 0.00 46.66 2.40
377 378 2.768344 TGGGGAGGCCCGATTCTC 60.768 66.667 0.00 0.00 46.66 2.87
378 379 2.768344 GGGGAGGCCCGATTCTCA 60.768 66.667 0.00 0.00 46.66 3.27
379 380 2.375345 GGGGAGGCCCGATTCTCAA 61.375 63.158 0.00 0.00 46.66 3.02
380 381 1.147153 GGGAGGCCCGATTCTCAAG 59.853 63.158 0.00 0.00 32.13 3.02
381 382 1.338136 GGGAGGCCCGATTCTCAAGA 61.338 60.000 0.00 0.00 32.13 3.02
382 383 0.761802 GGAGGCCCGATTCTCAAGAT 59.238 55.000 0.00 0.00 0.00 2.40
383 384 1.141858 GGAGGCCCGATTCTCAAGATT 59.858 52.381 0.00 0.00 0.00 2.40
384 385 2.488952 GAGGCCCGATTCTCAAGATTC 58.511 52.381 0.00 0.00 0.00 2.52
385 386 1.141858 AGGCCCGATTCTCAAGATTCC 59.858 52.381 0.00 0.00 0.00 3.01
386 387 1.221414 GCCCGATTCTCAAGATTCCG 58.779 55.000 0.00 0.00 0.00 4.30
387 388 1.202533 GCCCGATTCTCAAGATTCCGA 60.203 52.381 0.00 0.00 0.00 4.55
388 389 2.748605 CCCGATTCTCAAGATTCCGAG 58.251 52.381 0.00 0.00 0.00 4.63
389 390 2.362397 CCCGATTCTCAAGATTCCGAGA 59.638 50.000 0.42 0.42 36.50 4.04
390 391 3.551863 CCCGATTCTCAAGATTCCGAGAG 60.552 52.174 4.21 0.00 39.36 3.20
391 392 3.316588 CCGATTCTCAAGATTCCGAGAGA 59.683 47.826 4.21 0.00 39.36 3.10
393 394 5.508825 CCGATTCTCAAGATTCCGAGAGAAT 60.509 44.000 18.24 18.24 46.87 2.40
407 408 4.195225 GAGAGAATCGGTCAAAGGAACT 57.805 45.455 0.00 0.00 42.67 3.01
408 409 3.929610 GAGAGAATCGGTCAAAGGAACTG 59.070 47.826 0.00 0.00 42.67 3.16
409 410 3.003480 GAGAATCGGTCAAAGGAACTGG 58.997 50.000 0.00 0.00 40.86 4.00
410 411 2.084546 GAATCGGTCAAAGGAACTGGG 58.915 52.381 0.00 0.00 40.86 4.45
411 412 0.322546 ATCGGTCAAAGGAACTGGGC 60.323 55.000 0.00 0.00 40.86 5.36
412 413 1.971695 CGGTCAAAGGAACTGGGCC 60.972 63.158 0.00 0.00 40.86 5.80
413 414 1.460699 GGTCAAAGGAACTGGGCCT 59.539 57.895 4.53 0.00 40.86 5.19
415 416 1.074889 GGTCAAAGGAACTGGGCCTTA 59.925 52.381 4.53 0.00 44.72 2.69
416 417 2.437413 GTCAAAGGAACTGGGCCTTAG 58.563 52.381 4.53 4.12 44.72 2.18
417 418 2.062636 TCAAAGGAACTGGGCCTTAGT 58.937 47.619 4.53 4.87 44.72 2.24
418 419 2.039879 TCAAAGGAACTGGGCCTTAGTC 59.960 50.000 12.56 7.35 44.72 2.59
419 420 1.742308 AAGGAACTGGGCCTTAGTCA 58.258 50.000 12.56 0.00 43.70 3.41
420 421 1.280457 AGGAACTGGGCCTTAGTCAG 58.720 55.000 12.56 8.75 37.18 3.51
421 422 1.203313 AGGAACTGGGCCTTAGTCAGA 60.203 52.381 12.31 0.00 37.18 3.27
422 423 1.208293 GGAACTGGGCCTTAGTCAGAG 59.792 57.143 12.31 0.00 33.19 3.35
423 424 1.208293 GAACTGGGCCTTAGTCAGAGG 59.792 57.143 12.31 0.00 37.35 3.69
424 425 0.117340 ACTGGGCCTTAGTCAGAGGT 59.883 55.000 12.31 0.00 36.63 3.85
425 426 0.539051 CTGGGCCTTAGTCAGAGGTG 59.461 60.000 4.53 0.00 36.63 4.00
426 427 0.909610 TGGGCCTTAGTCAGAGGTGG 60.910 60.000 4.53 0.00 36.63 4.61
427 428 1.222113 GGCCTTAGTCAGAGGTGGC 59.778 63.158 0.00 0.00 39.61 5.01
428 429 1.553690 GGCCTTAGTCAGAGGTGGCA 61.554 60.000 0.00 0.00 41.86 4.92
429 430 0.107945 GCCTTAGTCAGAGGTGGCAG 60.108 60.000 0.00 0.00 40.04 4.85
430 431 0.539051 CCTTAGTCAGAGGTGGCAGG 59.461 60.000 0.00 0.00 0.00 4.85
431 432 1.270907 CTTAGTCAGAGGTGGCAGGT 58.729 55.000 0.00 0.00 0.00 4.00
432 433 1.625818 CTTAGTCAGAGGTGGCAGGTT 59.374 52.381 0.00 0.00 0.00 3.50
433 434 1.729586 TAGTCAGAGGTGGCAGGTTT 58.270 50.000 0.00 0.00 0.00 3.27
434 435 0.398318 AGTCAGAGGTGGCAGGTTTC 59.602 55.000 0.00 0.00 0.00 2.78
435 436 0.951040 GTCAGAGGTGGCAGGTTTCG 60.951 60.000 0.00 0.00 0.00 3.46
436 437 1.071471 CAGAGGTGGCAGGTTTCGT 59.929 57.895 0.00 0.00 0.00 3.85
437 438 0.320374 CAGAGGTGGCAGGTTTCGTA 59.680 55.000 0.00 0.00 0.00 3.43
438 439 0.608640 AGAGGTGGCAGGTTTCGTAG 59.391 55.000 0.00 0.00 0.00 3.51
439 440 0.391263 GAGGTGGCAGGTTTCGTAGG 60.391 60.000 0.00 0.00 0.00 3.18
440 441 2.038837 GGTGGCAGGTTTCGTAGGC 61.039 63.158 0.00 0.00 0.00 3.93
441 442 1.003718 GTGGCAGGTTTCGTAGGCT 60.004 57.895 0.00 0.00 0.00 4.58
442 443 0.605589 GTGGCAGGTTTCGTAGGCTT 60.606 55.000 0.00 0.00 0.00 4.35
443 444 0.109723 TGGCAGGTTTCGTAGGCTTT 59.890 50.000 0.00 0.00 0.00 3.51
444 445 1.348366 TGGCAGGTTTCGTAGGCTTTA 59.652 47.619 0.00 0.00 0.00 1.85
445 446 2.007608 GGCAGGTTTCGTAGGCTTTAG 58.992 52.381 0.00 0.00 0.00 1.85
446 447 2.007608 GCAGGTTTCGTAGGCTTTAGG 58.992 52.381 0.00 0.00 0.00 2.69
447 448 2.007608 CAGGTTTCGTAGGCTTTAGGC 58.992 52.381 0.00 0.00 41.43 3.93
458 459 3.782889 GGCTTTAGGCTGGTTGTAATG 57.217 47.619 0.00 0.00 41.46 1.90
459 460 3.352648 GGCTTTAGGCTGGTTGTAATGA 58.647 45.455 0.00 0.00 41.46 2.57
460 461 3.378427 GGCTTTAGGCTGGTTGTAATGAG 59.622 47.826 0.00 0.00 41.46 2.90
461 462 4.261801 GCTTTAGGCTGGTTGTAATGAGA 58.738 43.478 0.00 0.00 38.06 3.27
462 463 4.333926 GCTTTAGGCTGGTTGTAATGAGAG 59.666 45.833 0.00 0.00 38.06 3.20
463 464 5.491982 CTTTAGGCTGGTTGTAATGAGAGT 58.508 41.667 0.00 0.00 0.00 3.24
464 465 6.614694 TTTAGGCTGGTTGTAATGAGAGTA 57.385 37.500 0.00 0.00 0.00 2.59
465 466 6.808321 TTAGGCTGGTTGTAATGAGAGTAT 57.192 37.500 0.00 0.00 0.00 2.12
466 467 5.283457 AGGCTGGTTGTAATGAGAGTATC 57.717 43.478 0.00 0.00 0.00 2.24
467 468 4.716784 AGGCTGGTTGTAATGAGAGTATCA 59.283 41.667 0.00 0.00 43.70 2.15
488 489 9.987272 GTATCATAGCTAATATCATACATGCCA 57.013 33.333 0.00 0.00 0.00 4.92
490 491 8.722480 TCATAGCTAATATCATACATGCCAAC 57.278 34.615 0.00 0.00 0.00 3.77
491 492 8.542926 TCATAGCTAATATCATACATGCCAACT 58.457 33.333 0.00 0.00 0.00 3.16
492 493 9.822185 CATAGCTAATATCATACATGCCAACTA 57.178 33.333 0.00 0.00 0.00 2.24
494 495 7.334090 AGCTAATATCATACATGCCAACTAGG 58.666 38.462 0.00 0.00 41.84 3.02
512 513 3.800628 GCAACTTTGATGAGGTGGC 57.199 52.632 0.00 0.00 34.87 5.01
513 514 0.961019 GCAACTTTGATGAGGTGGCA 59.039 50.000 0.00 0.00 34.87 4.92
514 515 1.547372 GCAACTTTGATGAGGTGGCAT 59.453 47.619 0.00 0.00 34.87 4.40
515 516 2.754552 GCAACTTTGATGAGGTGGCATA 59.245 45.455 0.00 0.00 34.87 3.14
516 517 3.193267 GCAACTTTGATGAGGTGGCATAA 59.807 43.478 0.00 0.00 34.87 1.90
517 518 4.321899 GCAACTTTGATGAGGTGGCATAAA 60.322 41.667 0.00 0.00 34.87 1.40
518 519 5.782047 CAACTTTGATGAGGTGGCATAAAA 58.218 37.500 0.00 0.00 30.59 1.52
519 520 6.400568 CAACTTTGATGAGGTGGCATAAAAT 58.599 36.000 0.00 0.00 30.28 1.82
520 521 6.610075 ACTTTGATGAGGTGGCATAAAATT 57.390 33.333 0.00 0.00 30.28 1.82
521 522 7.716799 ACTTTGATGAGGTGGCATAAAATTA 57.283 32.000 0.00 0.00 30.28 1.40
522 523 8.133024 ACTTTGATGAGGTGGCATAAAATTAA 57.867 30.769 0.00 0.00 30.28 1.40
523 524 8.592809 ACTTTGATGAGGTGGCATAAAATTAAA 58.407 29.630 0.00 0.00 30.28 1.52
524 525 9.603921 CTTTGATGAGGTGGCATAAAATTAAAT 57.396 29.630 0.00 0.00 30.28 1.40
525 526 8.945481 TTGATGAGGTGGCATAAAATTAAATG 57.055 30.769 0.00 0.00 0.00 2.32
526 527 8.303780 TGATGAGGTGGCATAAAATTAAATGA 57.696 30.769 0.00 0.00 0.00 2.57
527 528 8.756927 TGATGAGGTGGCATAAAATTAAATGAA 58.243 29.630 0.00 0.00 0.00 2.57
528 529 9.252962 GATGAGGTGGCATAAAATTAAATGAAG 57.747 33.333 0.00 0.00 0.00 3.02
529 530 8.133024 TGAGGTGGCATAAAATTAAATGAAGT 57.867 30.769 0.00 0.00 0.00 3.01
530 531 9.249053 TGAGGTGGCATAAAATTAAATGAAGTA 57.751 29.630 0.00 0.00 0.00 2.24
584 585 9.856488 ACCGTATCATAATAAATGCTACACTAG 57.144 33.333 0.00 0.00 0.00 2.57
585 586 9.856488 CCGTATCATAATAAATGCTACACTAGT 57.144 33.333 0.00 0.00 0.00 2.57
595 596 7.776933 AAATGCTACACTAGTATGTGTCATG 57.223 36.000 3.46 0.00 46.90 3.07
596 597 4.682787 TGCTACACTAGTATGTGTCATGC 58.317 43.478 3.46 8.05 46.90 4.06
597 598 4.159506 TGCTACACTAGTATGTGTCATGCA 59.840 41.667 3.46 10.15 46.90 3.96
598 599 5.163416 TGCTACACTAGTATGTGTCATGCAT 60.163 40.000 3.46 0.00 46.90 3.96
599 600 5.176406 GCTACACTAGTATGTGTCATGCATG 59.824 44.000 21.07 21.07 46.90 4.06
600 601 4.445453 ACACTAGTATGTGTCATGCATGG 58.555 43.478 25.97 8.61 46.90 3.66
601 602 3.249320 CACTAGTATGTGTCATGCATGGC 59.751 47.826 24.40 24.40 33.61 4.40
602 603 2.423446 AGTATGTGTCATGCATGGCA 57.577 45.000 29.45 29.45 44.86 4.92
603 604 2.725637 AGTATGTGTCATGCATGGCAA 58.274 42.857 34.01 23.37 44.94 4.52
604 605 3.293337 AGTATGTGTCATGCATGGCAAT 58.707 40.909 34.01 27.34 44.94 3.56
605 606 4.463070 AGTATGTGTCATGCATGGCAATA 58.537 39.130 34.01 26.44 44.94 1.90
606 607 4.888823 AGTATGTGTCATGCATGGCAATAA 59.111 37.500 34.01 22.53 44.94 1.40
607 608 4.739587 ATGTGTCATGCATGGCAATAAA 57.260 36.364 34.01 20.14 44.94 1.40
608 609 4.739587 TGTGTCATGCATGGCAATAAAT 57.260 36.364 34.01 0.00 44.94 1.40
609 610 5.848833 TGTGTCATGCATGGCAATAAATA 57.151 34.783 34.01 14.13 44.94 1.40
610 611 6.218108 TGTGTCATGCATGGCAATAAATAA 57.782 33.333 34.01 7.61 44.94 1.40
611 612 6.637657 TGTGTCATGCATGGCAATAAATAAA 58.362 32.000 34.01 6.82 44.94 1.40
612 613 6.757478 TGTGTCATGCATGGCAATAAATAAAG 59.243 34.615 34.01 0.00 44.94 1.85
613 614 6.979817 GTGTCATGCATGGCAATAAATAAAGA 59.020 34.615 34.01 5.47 44.94 2.52
614 615 6.979817 TGTCATGCATGGCAATAAATAAAGAC 59.020 34.615 30.82 13.98 43.62 3.01
615 616 6.979817 GTCATGCATGGCAATAAATAAAGACA 59.020 34.615 26.04 0.00 43.62 3.41
616 617 7.654520 GTCATGCATGGCAATAAATAAAGACAT 59.345 33.333 26.04 0.00 43.62 3.06
617 618 7.868922 TCATGCATGGCAATAAATAAAGACATC 59.131 33.333 25.97 0.00 43.62 3.06
618 619 7.350744 TGCATGGCAATAAATAAAGACATCT 57.649 32.000 0.00 0.00 34.76 2.90
619 620 8.462589 TGCATGGCAATAAATAAAGACATCTA 57.537 30.769 0.00 0.00 34.76 1.98
620 621 9.081204 TGCATGGCAATAAATAAAGACATCTAT 57.919 29.630 0.00 0.00 34.76 1.98
621 622 9.350357 GCATGGCAATAAATAAAGACATCTATG 57.650 33.333 0.00 0.00 0.00 2.23
650 651 8.928448 ACTACCATATGATACTATGCATTAGGG 58.072 37.037 3.54 2.76 31.68 3.53
651 652 7.995052 ACCATATGATACTATGCATTAGGGA 57.005 36.000 3.54 0.00 31.68 4.20
652 653 8.027524 ACCATATGATACTATGCATTAGGGAG 57.972 38.462 3.54 0.00 31.68 4.30
653 654 7.625280 ACCATATGATACTATGCATTAGGGAGT 59.375 37.037 3.54 4.18 31.68 3.85
654 655 9.147732 CCATATGATACTATGCATTAGGGAGTA 57.852 37.037 3.54 6.63 31.68 2.59
663 664 9.944079 ACTATGCATTAGGGAGTATCATATACT 57.056 33.333 3.54 0.00 36.25 2.12
666 667 8.239038 TGCATTAGGGAGTATCATATACTAGC 57.761 38.462 0.00 0.00 36.25 3.42
667 668 7.839200 TGCATTAGGGAGTATCATATACTAGCA 59.161 37.037 0.00 0.00 36.25 3.49
668 669 8.138712 GCATTAGGGAGTATCATATACTAGCAC 58.861 40.741 0.00 0.00 36.25 4.40
669 670 7.860918 TTAGGGAGTATCATATACTAGCACG 57.139 40.000 0.00 0.00 36.25 5.34
670 671 5.817784 AGGGAGTATCATATACTAGCACGT 58.182 41.667 0.00 0.00 36.25 4.49
671 672 6.246919 AGGGAGTATCATATACTAGCACGTT 58.753 40.000 0.00 0.00 36.25 3.99
672 673 6.374894 AGGGAGTATCATATACTAGCACGTTC 59.625 42.308 0.00 0.00 36.25 3.95
673 674 6.150641 GGGAGTATCATATACTAGCACGTTCA 59.849 42.308 0.00 0.00 36.25 3.18
674 675 7.244898 GGAGTATCATATACTAGCACGTTCAG 58.755 42.308 0.00 0.00 36.25 3.02
675 676 7.119407 GGAGTATCATATACTAGCACGTTCAGA 59.881 40.741 0.00 0.00 36.25 3.27
676 677 8.568676 AGTATCATATACTAGCACGTTCAGAT 57.431 34.615 0.00 0.00 0.00 2.90
677 678 8.454894 AGTATCATATACTAGCACGTTCAGATG 58.545 37.037 0.00 0.00 0.00 2.90
678 679 6.877611 TCATATACTAGCACGTTCAGATGA 57.122 37.500 0.00 0.00 0.00 2.92
679 680 7.454260 TCATATACTAGCACGTTCAGATGAT 57.546 36.000 0.00 0.00 0.00 2.45
680 681 8.561738 TCATATACTAGCACGTTCAGATGATA 57.438 34.615 0.00 0.00 0.00 2.15
681 682 8.669243 TCATATACTAGCACGTTCAGATGATAG 58.331 37.037 0.00 0.00 40.01 2.08
682 683 6.885952 ATACTAGCACGTTCAGATGATAGT 57.114 37.500 7.27 7.27 46.69 2.12
684 685 6.885952 ACTAGCACGTTCAGATGATAGTAT 57.114 37.500 0.58 0.00 44.12 2.12
685 686 6.904498 ACTAGCACGTTCAGATGATAGTATC 58.096 40.000 2.97 2.97 44.12 2.24
686 687 5.774498 AGCACGTTCAGATGATAGTATCA 57.226 39.130 15.10 15.10 44.55 2.15
716 717 9.928618 ACTAGTATCATAGTATCATATGGCAGT 57.071 33.333 2.13 0.00 34.21 4.40
763 764 9.804758 GCATGATACTAACTTATGATACTACCC 57.195 37.037 0.00 0.00 0.00 3.69
773 774 8.326765 ACTTATGATACTACCCATTACAACCA 57.673 34.615 0.00 0.00 0.00 3.67
776 777 2.801077 ACTACCCATTACAACCAGCC 57.199 50.000 0.00 0.00 0.00 4.85
780 781 3.081710 ACCCATTACAACCAGCCTTAC 57.918 47.619 0.00 0.00 0.00 2.34
793 794 2.086869 AGCCTTACTAGCACGTTCGTA 58.913 47.619 0.00 0.00 0.00 3.43
794 795 2.489329 AGCCTTACTAGCACGTTCGTAA 59.511 45.455 0.00 0.00 0.00 3.18
795 796 3.129988 AGCCTTACTAGCACGTTCGTAAT 59.870 43.478 0.00 0.00 0.00 1.89
832 834 2.033550 CGAATCTCCTACCGAACTCCAG 59.966 54.545 0.00 0.00 0.00 3.86
934 936 1.355005 ATATTATACGCGCGCATGCA 58.645 45.000 32.58 14.49 42.97 3.96
975 977 4.581824 TGACTCGACTATATAAAAGCGGGT 59.418 41.667 0.00 0.00 32.49 5.28
1016 1019 0.747255 CCACACTCATCCCCTACTCG 59.253 60.000 0.00 0.00 0.00 4.18
1026 1030 1.283181 CCCTACTCGATCGCCTTCG 59.717 63.158 11.09 0.00 40.46 3.79
1027 1031 1.370657 CCTACTCGATCGCCTTCGC 60.371 63.158 11.09 0.00 38.97 4.70
1045 1049 3.207669 CCCATCCTCTTGCAGCGC 61.208 66.667 0.00 0.00 0.00 5.92
1062 1066 2.846532 CCCTCACCCAAGCAACCT 59.153 61.111 0.00 0.00 0.00 3.50
1319 1326 2.182030 CTCAAGGTCTCGTCGGCC 59.818 66.667 0.00 0.00 0.00 6.13
1391 1398 0.924090 AGCTTTTGATCGATCGCGTC 59.076 50.000 20.03 11.53 38.98 5.19
1425 1432 2.298158 GACCGATGGCGATCTGGTGT 62.298 60.000 22.59 9.04 40.82 4.16
1426 1433 1.153369 CCGATGGCGATCTGGTGTT 60.153 57.895 7.15 0.00 40.82 3.32
1427 1434 1.431488 CCGATGGCGATCTGGTGTTG 61.431 60.000 7.15 0.00 40.82 3.33
1428 1435 0.740868 CGATGGCGATCTGGTGTTGT 60.741 55.000 7.15 0.00 40.82 3.32
1434 1441 1.868997 GATCTGGTGTTGTGGCACG 59.131 57.895 13.77 0.00 40.08 5.34
1467 1474 4.818534 AATCAATCATGGCGTGTGTATC 57.181 40.909 6.60 0.00 0.00 2.24
1468 1475 3.258971 TCAATCATGGCGTGTGTATCA 57.741 42.857 6.60 0.00 0.00 2.15
1469 1476 3.197265 TCAATCATGGCGTGTGTATCAG 58.803 45.455 6.60 0.00 0.00 2.90
1470 1477 2.938451 CAATCATGGCGTGTGTATCAGT 59.062 45.455 6.60 0.00 0.00 3.41
1471 1478 2.008752 TCATGGCGTGTGTATCAGTG 57.991 50.000 6.60 0.00 0.00 3.66
1472 1479 1.275010 TCATGGCGTGTGTATCAGTGT 59.725 47.619 6.60 0.00 0.00 3.55
1473 1480 2.494073 TCATGGCGTGTGTATCAGTGTA 59.506 45.455 6.60 0.00 0.00 2.90
1474 1481 3.132111 TCATGGCGTGTGTATCAGTGTAT 59.868 43.478 6.60 0.00 0.00 2.29
1519 1526 3.056107 ACATGCTAAACTCGGTAAGCTGA 60.056 43.478 0.00 0.00 35.95 4.26
1574 1587 2.091055 TCAATTTTCCTTGGGTGGGTGA 60.091 45.455 0.00 0.00 0.00 4.02
1751 1766 4.579869 AGAGTCCACGCAAGAAATATGTT 58.420 39.130 0.00 0.00 43.62 2.71
1838 1853 0.968901 AGTATCGAACTCGGCCCACA 60.969 55.000 0.00 0.00 40.29 4.17
1849 1864 0.664761 CGGCCCACATTAGATGCAAG 59.335 55.000 0.00 0.00 0.00 4.01
1879 1894 7.121168 TGTTGTAAGATATTGCTAGCAAAAGCT 59.879 33.333 32.35 24.12 43.19 3.74
1959 1975 7.278646 GGAGATGAAAAGATTGGGCATTAAAAC 59.721 37.037 0.00 0.00 0.00 2.43
1963 1979 6.705381 TGAAAAGATTGGGCATTAAAACTGTG 59.295 34.615 0.00 0.00 0.00 3.66
2003 2019 9.905713 TCATTTCAAGATATATATAAGGGGCAC 57.094 33.333 0.00 0.00 0.00 5.01
2004 2020 9.685276 CATTTCAAGATATATATAAGGGGCACA 57.315 33.333 0.00 0.00 0.00 4.57
2013 2029 2.666272 TAAGGGGCACATGTTGACAA 57.334 45.000 0.00 0.00 32.99 3.18
2015 2031 2.014010 AGGGGCACATGTTGACAAAT 57.986 45.000 0.00 0.00 32.99 2.32
2110 2135 3.071479 ACGACACATTACACCCAACATC 58.929 45.455 0.00 0.00 0.00 3.06
2156 2181 7.488471 CGTTGAGTAAAACCCATAACAACAAAA 59.512 33.333 0.00 0.00 37.00 2.44
2177 2202 9.691362 ACAAAACAAAACATATCAATAGACCAC 57.309 29.630 0.00 0.00 0.00 4.16
2244 2269 9.482627 TTGTAATAAAGCACAATTTTAACCCTG 57.517 29.630 0.00 0.00 29.93 4.45
2246 2271 9.135843 GTAATAAAGCACAATTTTAACCCTGTC 57.864 33.333 0.00 0.00 0.00 3.51
2250 2275 3.564511 CACAATTTTAACCCTGTCGCAG 58.435 45.455 0.52 0.52 0.00 5.18
2311 2338 4.248058 ACAAAACTACGTACCACTATGGC 58.752 43.478 0.00 0.00 42.67 4.40
2327 2354 2.320587 GGCACACCTCACTCGCTTG 61.321 63.158 0.00 0.00 0.00 4.01
2344 2371 6.261381 ACTCGCTTGTATTTTGGTTACTTGAA 59.739 34.615 0.00 0.00 0.00 2.69
2345 2372 6.432107 TCGCTTGTATTTTGGTTACTTGAAC 58.568 36.000 0.00 0.00 37.31 3.18
2359 2386 6.460537 GGTTACTTGAACAAAGGTAAAGGTGG 60.461 42.308 0.00 0.00 40.51 4.61
2375 2402 9.150348 GGTAAAGGTGGACAATAATTCAAAATG 57.850 33.333 0.00 0.00 0.00 2.32
2386 2413 9.296400 ACAATAATTCAAAATGCGGTACATAAC 57.704 29.630 0.00 0.00 38.34 1.89
2402 2429 9.944663 CGGTACATAACTGCATGTATTTAAATT 57.055 29.630 5.91 0.00 41.97 1.82
2500 2529 6.301108 TGTACGCTTAGCAGAATTAAAAACG 58.699 36.000 4.70 0.00 0.00 3.60
2594 2994 9.691362 TTGGCAAAGTTCTATATGTTTTTCTTC 57.309 29.630 0.00 0.00 0.00 2.87
2609 3009 8.980143 TGTTTTTCTTCTAAAACTTTGTCTGG 57.020 30.769 11.74 0.00 44.45 3.86
2623 3023 2.596346 TGTCTGGGTTGTTGCATCATT 58.404 42.857 0.00 0.00 0.00 2.57
2628 3028 4.220382 TCTGGGTTGTTGCATCATTAAAGG 59.780 41.667 0.00 0.00 0.00 3.11
2631 3031 4.176271 GGTTGTTGCATCATTAAAGGAGC 58.824 43.478 0.00 0.00 0.00 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 3.561143 ACATGCCACCAGACTACAAAAA 58.439 40.909 0.00 0.00 0.00 1.94
10 11 3.146066 GACATGCCACCAGACTACAAAA 58.854 45.455 0.00 0.00 0.00 2.44
11 12 2.371841 AGACATGCCACCAGACTACAAA 59.628 45.455 0.00 0.00 0.00 2.83
12 13 1.977854 AGACATGCCACCAGACTACAA 59.022 47.619 0.00 0.00 0.00 2.41
13 14 1.644509 AGACATGCCACCAGACTACA 58.355 50.000 0.00 0.00 0.00 2.74
14 15 2.761208 ACTAGACATGCCACCAGACTAC 59.239 50.000 0.00 0.00 0.00 2.73
15 16 3.101643 ACTAGACATGCCACCAGACTA 57.898 47.619 0.00 0.00 0.00 2.59
16 17 1.944177 ACTAGACATGCCACCAGACT 58.056 50.000 0.00 0.00 0.00 3.24
17 18 2.770164 AACTAGACATGCCACCAGAC 57.230 50.000 0.00 0.00 0.00 3.51
18 19 3.441101 AGTAACTAGACATGCCACCAGA 58.559 45.455 0.00 0.00 0.00 3.86
19 20 3.895232 AGTAACTAGACATGCCACCAG 57.105 47.619 0.00 0.00 0.00 4.00
20 21 4.159693 CACTAGTAACTAGACATGCCACCA 59.840 45.833 0.00 0.00 37.49 4.17
21 22 4.401519 TCACTAGTAACTAGACATGCCACC 59.598 45.833 0.00 0.00 37.49 4.61
22 23 5.341617 GTCACTAGTAACTAGACATGCCAC 58.658 45.833 0.00 0.00 37.49 5.01
23 24 4.095932 CGTCACTAGTAACTAGACATGCCA 59.904 45.833 10.02 0.00 37.49 4.92
24 25 4.497674 CCGTCACTAGTAACTAGACATGCC 60.498 50.000 10.02 0.00 37.49 4.40
25 26 4.334759 TCCGTCACTAGTAACTAGACATGC 59.665 45.833 10.02 0.00 37.49 4.06
26 27 6.260271 TGATCCGTCACTAGTAACTAGACATG 59.740 42.308 10.02 0.00 37.49 3.21
27 28 6.354938 TGATCCGTCACTAGTAACTAGACAT 58.645 40.000 10.02 0.00 37.49 3.06
28 29 5.737860 TGATCCGTCACTAGTAACTAGACA 58.262 41.667 10.02 0.00 37.49 3.41
29 30 5.277442 GCTGATCCGTCACTAGTAACTAGAC 60.277 48.000 0.00 0.00 37.49 2.59
30 31 4.815308 GCTGATCCGTCACTAGTAACTAGA 59.185 45.833 0.00 0.00 37.49 2.43
31 32 4.023878 GGCTGATCCGTCACTAGTAACTAG 60.024 50.000 0.00 0.00 39.72 2.57
32 33 3.881688 GGCTGATCCGTCACTAGTAACTA 59.118 47.826 0.00 0.00 0.00 2.24
33 34 2.688958 GGCTGATCCGTCACTAGTAACT 59.311 50.000 0.00 0.00 0.00 2.24
34 35 3.081329 GGCTGATCCGTCACTAGTAAC 57.919 52.381 0.00 0.00 0.00 2.50
46 47 0.460284 ACACATCGTTCGGCTGATCC 60.460 55.000 0.00 0.00 0.00 3.36
47 48 0.647410 CACACATCGTTCGGCTGATC 59.353 55.000 0.00 0.00 0.00 2.92
48 49 0.037326 ACACACATCGTTCGGCTGAT 60.037 50.000 0.00 0.00 0.00 2.90
49 50 0.943835 CACACACATCGTTCGGCTGA 60.944 55.000 0.00 0.00 0.00 4.26
50 51 1.492873 CACACACATCGTTCGGCTG 59.507 57.895 0.00 0.00 0.00 4.85
51 52 2.317609 GCACACACATCGTTCGGCT 61.318 57.895 0.00 0.00 0.00 5.52
52 53 1.911293 ATGCACACACATCGTTCGGC 61.911 55.000 0.00 0.00 0.00 5.54
53 54 0.095245 GATGCACACACATCGTTCGG 59.905 55.000 0.00 0.00 37.32 4.30
54 55 3.568181 GATGCACACACATCGTTCG 57.432 52.632 0.00 0.00 37.32 3.95
59 60 3.190079 ACTACATCGATGCACACACATC 58.810 45.455 25.11 0.00 42.52 3.06
60 61 3.251479 ACTACATCGATGCACACACAT 57.749 42.857 25.11 5.74 0.00 3.21
61 62 2.736192 CAACTACATCGATGCACACACA 59.264 45.455 25.11 1.45 0.00 3.72
62 63 2.474526 GCAACTACATCGATGCACACAC 60.475 50.000 25.11 7.71 38.63 3.82
63 64 1.731709 GCAACTACATCGATGCACACA 59.268 47.619 25.11 4.87 38.63 3.72
64 65 1.731709 TGCAACTACATCGATGCACAC 59.268 47.619 25.11 10.53 43.32 3.82
65 66 2.091852 TGCAACTACATCGATGCACA 57.908 45.000 25.11 11.21 43.32 4.57
68 69 2.868583 ACTCATGCAACTACATCGATGC 59.131 45.455 25.11 12.36 39.22 3.91
69 70 5.163824 ACAAACTCATGCAACTACATCGATG 60.164 40.000 23.68 23.68 0.00 3.84
70 71 4.937620 ACAAACTCATGCAACTACATCGAT 59.062 37.500 0.00 0.00 0.00 3.59
71 72 4.314961 ACAAACTCATGCAACTACATCGA 58.685 39.130 0.00 0.00 0.00 3.59
72 73 4.668576 ACAAACTCATGCAACTACATCG 57.331 40.909 0.00 0.00 0.00 3.84
73 74 8.648557 TCTATACAAACTCATGCAACTACATC 57.351 34.615 0.00 0.00 0.00 3.06
74 75 9.618890 AATCTATACAAACTCATGCAACTACAT 57.381 29.630 0.00 0.00 0.00 2.29
75 76 9.448438 AAATCTATACAAACTCATGCAACTACA 57.552 29.630 0.00 0.00 0.00 2.74
76 77 9.708222 CAAATCTATACAAACTCATGCAACTAC 57.292 33.333 0.00 0.00 0.00 2.73
77 78 9.665719 TCAAATCTATACAAACTCATGCAACTA 57.334 29.630 0.00 0.00 0.00 2.24
78 79 8.565896 TCAAATCTATACAAACTCATGCAACT 57.434 30.769 0.00 0.00 0.00 3.16
79 80 8.668353 TCTCAAATCTATACAAACTCATGCAAC 58.332 33.333 0.00 0.00 0.00 4.17
80 81 8.791327 TCTCAAATCTATACAAACTCATGCAA 57.209 30.769 0.00 0.00 0.00 4.08
81 82 8.791327 TTCTCAAATCTATACAAACTCATGCA 57.209 30.769 0.00 0.00 0.00 3.96
96 97 9.471702 ACACCTCAATTATCATTTCTCAAATCT 57.528 29.630 0.00 0.00 0.00 2.40
97 98 9.727627 GACACCTCAATTATCATTTCTCAAATC 57.272 33.333 0.00 0.00 0.00 2.17
98 99 8.689972 GGACACCTCAATTATCATTTCTCAAAT 58.310 33.333 0.00 0.00 0.00 2.32
99 100 7.148255 CGGACACCTCAATTATCATTTCTCAAA 60.148 37.037 0.00 0.00 0.00 2.69
100 101 6.316140 CGGACACCTCAATTATCATTTCTCAA 59.684 38.462 0.00 0.00 0.00 3.02
101 102 5.817296 CGGACACCTCAATTATCATTTCTCA 59.183 40.000 0.00 0.00 0.00 3.27
102 103 5.237344 CCGGACACCTCAATTATCATTTCTC 59.763 44.000 0.00 0.00 0.00 2.87
103 104 5.104527 TCCGGACACCTCAATTATCATTTCT 60.105 40.000 0.00 0.00 0.00 2.52
104 105 5.123227 TCCGGACACCTCAATTATCATTTC 58.877 41.667 0.00 0.00 0.00 2.17
105 106 5.110814 TCCGGACACCTCAATTATCATTT 57.889 39.130 0.00 0.00 0.00 2.32
106 107 4.771114 TCCGGACACCTCAATTATCATT 57.229 40.909 0.00 0.00 0.00 2.57
107 108 4.982241 ATCCGGACACCTCAATTATCAT 57.018 40.909 6.12 0.00 0.00 2.45
108 109 7.547697 TTATATCCGGACACCTCAATTATCA 57.452 36.000 6.12 0.00 0.00 2.15
109 110 9.449719 AATTTATATCCGGACACCTCAATTATC 57.550 33.333 6.12 0.00 0.00 1.75
111 112 9.715121 GTAATTTATATCCGGACACCTCAATTA 57.285 33.333 6.12 8.60 0.00 1.40
112 113 8.215050 TGTAATTTATATCCGGACACCTCAATT 58.785 33.333 6.12 9.58 0.00 2.32
113 114 7.741785 TGTAATTTATATCCGGACACCTCAAT 58.258 34.615 6.12 0.00 0.00 2.57
114 115 7.127012 TGTAATTTATATCCGGACACCTCAA 57.873 36.000 6.12 0.00 0.00 3.02
115 116 6.734502 TGTAATTTATATCCGGACACCTCA 57.265 37.500 6.12 0.00 0.00 3.86
116 117 9.886132 ATAATGTAATTTATATCCGGACACCTC 57.114 33.333 6.12 0.00 37.87 3.85
160 161 3.894547 ATTCAAACGCCCGCGGACT 62.895 57.895 30.73 4.77 44.69 3.85
161 162 2.466520 AAATTCAAACGCCCGCGGAC 62.467 55.000 30.73 16.23 44.69 4.79
162 163 2.262303 AAATTCAAACGCCCGCGGA 61.262 52.632 30.73 3.37 44.69 5.54
163 164 2.085844 CAAATTCAAACGCCCGCGG 61.086 57.895 21.04 21.04 44.69 6.46
164 165 2.715849 GCAAATTCAAACGCCCGCG 61.716 57.895 7.69 7.69 46.03 6.46
165 166 2.379634 GGCAAATTCAAACGCCCGC 61.380 57.895 0.00 0.00 38.67 6.13
166 167 0.389687 ATGGCAAATTCAAACGCCCG 60.390 50.000 0.00 0.00 44.22 6.13
167 168 1.066929 AGATGGCAAATTCAAACGCCC 60.067 47.619 0.00 0.00 44.22 6.13
168 169 2.368655 AGATGGCAAATTCAAACGCC 57.631 45.000 0.00 0.00 45.11 5.68
169 170 4.355543 TCTAGATGGCAAATTCAAACGC 57.644 40.909 0.00 0.00 0.00 4.84
170 171 4.736793 GCATCTAGATGGCAAATTCAAACG 59.263 41.667 29.43 4.04 39.16 3.60
171 172 5.899299 AGCATCTAGATGGCAAATTCAAAC 58.101 37.500 29.43 11.50 39.16 2.93
172 173 6.140303 GAGCATCTAGATGGCAAATTCAAA 57.860 37.500 29.43 0.00 39.16 2.69
173 174 5.762825 GAGCATCTAGATGGCAAATTCAA 57.237 39.130 29.43 0.00 39.16 2.69
189 190 1.488393 AGAACTGGGCCTAAGAGCATC 59.512 52.381 4.53 0.00 0.00 3.91
190 191 1.589414 AGAACTGGGCCTAAGAGCAT 58.411 50.000 4.53 0.00 0.00 3.79
191 192 1.362224 AAGAACTGGGCCTAAGAGCA 58.638 50.000 4.53 0.00 0.00 4.26
192 193 2.489722 CAAAAGAACTGGGCCTAAGAGC 59.510 50.000 4.53 4.46 0.00 4.09
193 194 3.084786 CCAAAAGAACTGGGCCTAAGAG 58.915 50.000 4.53 0.00 0.00 2.85
194 195 2.445525 ACCAAAAGAACTGGGCCTAAGA 59.554 45.455 4.53 0.00 38.36 2.10
195 196 2.820197 GACCAAAAGAACTGGGCCTAAG 59.180 50.000 4.53 3.18 35.74 2.18
196 197 2.812613 CGACCAAAAGAACTGGGCCTAA 60.813 50.000 4.53 0.00 38.98 2.69
197 198 1.271163 CGACCAAAAGAACTGGGCCTA 60.271 52.381 4.53 0.00 38.98 3.93
198 199 0.537371 CGACCAAAAGAACTGGGCCT 60.537 55.000 4.53 0.00 38.98 5.19
199 200 0.536460 TCGACCAAAAGAACTGGGCC 60.536 55.000 0.00 0.00 38.98 5.80
200 201 1.534729 ATCGACCAAAAGAACTGGGC 58.465 50.000 0.00 0.00 38.77 5.36
201 202 3.412386 AGAATCGACCAAAAGAACTGGG 58.588 45.455 0.00 0.00 38.36 4.45
202 203 3.437049 GGAGAATCGACCAAAAGAACTGG 59.563 47.826 0.00 0.00 36.43 4.00
203 204 4.319177 AGGAGAATCGACCAAAAGAACTG 58.681 43.478 0.00 0.00 34.37 3.16
204 205 4.625607 AGGAGAATCGACCAAAAGAACT 57.374 40.909 0.00 0.00 34.37 3.01
205 206 6.796705 TTTAGGAGAATCGACCAAAAGAAC 57.203 37.500 0.00 0.00 34.37 3.01
206 207 7.883311 AGATTTTAGGAGAATCGACCAAAAGAA 59.117 33.333 0.00 0.00 38.29 2.52
207 208 7.394816 AGATTTTAGGAGAATCGACCAAAAGA 58.605 34.615 0.00 0.00 38.29 2.52
208 209 7.617041 AGATTTTAGGAGAATCGACCAAAAG 57.383 36.000 0.00 0.00 38.29 2.27
209 210 7.663905 TCAAGATTTTAGGAGAATCGACCAAAA 59.336 33.333 0.00 0.00 38.29 2.44
210 211 7.165485 TCAAGATTTTAGGAGAATCGACCAAA 58.835 34.615 0.00 0.00 38.29 3.28
211 212 6.707290 TCAAGATTTTAGGAGAATCGACCAA 58.293 36.000 0.00 0.00 38.29 3.67
212 213 6.154534 TCTCAAGATTTTAGGAGAATCGACCA 59.845 38.462 0.00 0.00 38.29 4.02
213 214 6.574350 TCTCAAGATTTTAGGAGAATCGACC 58.426 40.000 0.00 0.00 38.29 4.79
219 220 7.042335 GGTCGATTCTCAAGATTTTAGGAGAA 58.958 38.462 5.52 5.52 46.74 2.87
220 221 6.381420 AGGTCGATTCTCAAGATTTTAGGAGA 59.619 38.462 0.00 0.00 34.77 3.71
221 222 6.578023 AGGTCGATTCTCAAGATTTTAGGAG 58.422 40.000 0.00 0.00 0.00 3.69
222 223 6.546428 AGGTCGATTCTCAAGATTTTAGGA 57.454 37.500 0.00 0.00 0.00 2.94
223 224 6.258947 GGAAGGTCGATTCTCAAGATTTTAGG 59.741 42.308 0.00 0.00 0.00 2.69
224 225 6.818644 TGGAAGGTCGATTCTCAAGATTTTAG 59.181 38.462 0.00 0.00 0.00 1.85
225 226 6.594159 GTGGAAGGTCGATTCTCAAGATTTTA 59.406 38.462 0.00 0.00 0.00 1.52
226 227 5.412904 GTGGAAGGTCGATTCTCAAGATTTT 59.587 40.000 0.00 0.00 0.00 1.82
227 228 4.938226 GTGGAAGGTCGATTCTCAAGATTT 59.062 41.667 0.00 0.00 0.00 2.17
228 229 4.508662 GTGGAAGGTCGATTCTCAAGATT 58.491 43.478 0.00 0.00 0.00 2.40
229 230 3.118592 GGTGGAAGGTCGATTCTCAAGAT 60.119 47.826 0.00 0.00 0.00 2.40
230 231 2.233922 GGTGGAAGGTCGATTCTCAAGA 59.766 50.000 0.00 0.00 0.00 3.02
231 232 2.622436 GGTGGAAGGTCGATTCTCAAG 58.378 52.381 0.00 0.00 0.00 3.02
232 233 1.278127 GGGTGGAAGGTCGATTCTCAA 59.722 52.381 0.00 0.00 0.00 3.02
233 234 0.902531 GGGTGGAAGGTCGATTCTCA 59.097 55.000 0.00 0.00 0.00 3.27
234 235 0.902531 TGGGTGGAAGGTCGATTCTC 59.097 55.000 0.00 0.00 0.00 2.87
235 236 0.905357 CTGGGTGGAAGGTCGATTCT 59.095 55.000 0.00 0.00 0.00 2.40
236 237 0.744771 GCTGGGTGGAAGGTCGATTC 60.745 60.000 0.00 0.00 0.00 2.52
237 238 1.201429 AGCTGGGTGGAAGGTCGATT 61.201 55.000 0.00 0.00 0.00 3.34
238 239 1.201429 AAGCTGGGTGGAAGGTCGAT 61.201 55.000 0.00 0.00 0.00 3.59
239 240 1.827399 GAAGCTGGGTGGAAGGTCGA 61.827 60.000 0.00 0.00 0.00 4.20
240 241 1.376037 GAAGCTGGGTGGAAGGTCG 60.376 63.158 0.00 0.00 0.00 4.79
241 242 0.035915 GAGAAGCTGGGTGGAAGGTC 60.036 60.000 0.00 0.00 0.00 3.85
242 243 1.492993 GGAGAAGCTGGGTGGAAGGT 61.493 60.000 0.00 0.00 0.00 3.50
243 244 1.301293 GGAGAAGCTGGGTGGAAGG 59.699 63.158 0.00 0.00 0.00 3.46
244 245 1.301293 GGGAGAAGCTGGGTGGAAG 59.699 63.158 0.00 0.00 0.00 3.46
245 246 2.592993 CGGGAGAAGCTGGGTGGAA 61.593 63.158 0.00 0.00 0.00 3.53
246 247 3.003173 CGGGAGAAGCTGGGTGGA 61.003 66.667 0.00 0.00 0.00 4.02
247 248 4.101448 CCGGGAGAAGCTGGGTGG 62.101 72.222 0.00 0.00 0.00 4.61
248 249 1.915078 ATTCCGGGAGAAGCTGGGTG 61.915 60.000 0.00 0.00 38.07 4.61
249 250 1.616628 ATTCCGGGAGAAGCTGGGT 60.617 57.895 0.00 0.00 38.07 4.51
250 251 1.147153 GATTCCGGGAGAAGCTGGG 59.853 63.158 0.00 0.00 37.90 4.45
251 252 4.865865 GATTCCGGGAGAAGCTGG 57.134 61.111 0.00 0.00 37.90 4.85
254 255 2.010497 GTTCAAGATTCCGGGAGAAGC 58.990 52.381 0.00 0.00 41.37 3.86
255 256 2.633488 GGTTCAAGATTCCGGGAGAAG 58.367 52.381 0.00 0.00 38.07 2.85
256 257 1.280998 GGGTTCAAGATTCCGGGAGAA 59.719 52.381 0.00 0.00 39.32 2.87
257 258 0.909623 GGGTTCAAGATTCCGGGAGA 59.090 55.000 0.00 0.00 0.00 3.71
258 259 0.618458 TGGGTTCAAGATTCCGGGAG 59.382 55.000 0.00 0.00 0.00 4.30
259 260 1.295020 ATGGGTTCAAGATTCCGGGA 58.705 50.000 0.00 0.00 0.00 5.14
260 261 3.508845 ATATGGGTTCAAGATTCCGGG 57.491 47.619 0.00 0.00 0.00 5.73
261 262 5.852282 AAAATATGGGTTCAAGATTCCGG 57.148 39.130 0.00 0.00 0.00 5.14
329 330 9.918630 CTTCCAGAATCTTGAACACATATTTTT 57.081 29.630 0.00 0.00 0.00 1.94
330 331 9.300681 TCTTCCAGAATCTTGAACACATATTTT 57.699 29.630 0.00 0.00 0.00 1.82
331 332 8.868522 TCTTCCAGAATCTTGAACACATATTT 57.131 30.769 0.00 0.00 0.00 1.40
332 333 8.868522 TTCTTCCAGAATCTTGAACACATATT 57.131 30.769 0.00 0.00 0.00 1.28
333 334 7.066766 GCTTCTTCCAGAATCTTGAACACATAT 59.933 37.037 0.00 0.00 33.13 1.78
334 335 6.372659 GCTTCTTCCAGAATCTTGAACACATA 59.627 38.462 0.00 0.00 33.13 2.29
335 336 5.182760 GCTTCTTCCAGAATCTTGAACACAT 59.817 40.000 0.00 0.00 33.13 3.21
336 337 4.516698 GCTTCTTCCAGAATCTTGAACACA 59.483 41.667 0.00 0.00 33.13 3.72
337 338 4.759183 AGCTTCTTCCAGAATCTTGAACAC 59.241 41.667 0.00 0.00 33.13 3.32
338 339 4.758674 CAGCTTCTTCCAGAATCTTGAACA 59.241 41.667 0.00 0.00 33.13 3.18
339 340 4.155644 CCAGCTTCTTCCAGAATCTTGAAC 59.844 45.833 0.00 0.00 33.13 3.18
340 341 4.330250 CCAGCTTCTTCCAGAATCTTGAA 58.670 43.478 0.00 0.00 33.13 2.69
341 342 3.307975 CCCAGCTTCTTCCAGAATCTTGA 60.308 47.826 0.00 0.00 33.13 3.02
342 343 3.015327 CCCAGCTTCTTCCAGAATCTTG 58.985 50.000 0.00 0.00 33.13 3.02
343 344 2.025510 CCCCAGCTTCTTCCAGAATCTT 60.026 50.000 0.00 0.00 33.13 2.40
344 345 1.563410 CCCCAGCTTCTTCCAGAATCT 59.437 52.381 0.00 0.00 33.13 2.40
345 346 1.561542 TCCCCAGCTTCTTCCAGAATC 59.438 52.381 0.00 0.00 33.13 2.52
346 347 1.563410 CTCCCCAGCTTCTTCCAGAAT 59.437 52.381 0.00 0.00 33.13 2.40
347 348 0.987294 CTCCCCAGCTTCTTCCAGAA 59.013 55.000 0.00 0.00 32.50 3.02
348 349 0.911525 CCTCCCCAGCTTCTTCCAGA 60.912 60.000 0.00 0.00 0.00 3.86
349 350 1.606531 CCTCCCCAGCTTCTTCCAG 59.393 63.158 0.00 0.00 0.00 3.86
350 351 2.606587 GCCTCCCCAGCTTCTTCCA 61.607 63.158 0.00 0.00 0.00 3.53
351 352 2.273776 GCCTCCCCAGCTTCTTCC 59.726 66.667 0.00 0.00 0.00 3.46
352 353 2.273776 GGCCTCCCCAGCTTCTTC 59.726 66.667 0.00 0.00 0.00 2.87
362 363 1.147153 CTTGAGAATCGGGCCTCCC 59.853 63.158 0.84 0.00 38.61 4.30
363 364 0.761802 ATCTTGAGAATCGGGCCTCC 59.238 55.000 0.84 0.00 38.61 4.30
364 365 2.488952 GAATCTTGAGAATCGGGCCTC 58.511 52.381 0.84 0.00 38.61 4.70
365 366 1.141858 GGAATCTTGAGAATCGGGCCT 59.858 52.381 0.84 0.00 38.61 5.19
366 367 1.598882 GGAATCTTGAGAATCGGGCC 58.401 55.000 0.00 0.00 38.61 5.80
367 368 1.202533 TCGGAATCTTGAGAATCGGGC 60.203 52.381 4.46 0.00 38.61 6.13
368 369 2.362397 TCTCGGAATCTTGAGAATCGGG 59.638 50.000 3.87 0.97 38.25 5.14
369 370 3.316588 TCTCTCGGAATCTTGAGAATCGG 59.683 47.826 7.06 0.00 40.51 4.18
370 371 4.560136 TCTCTCGGAATCTTGAGAATCG 57.440 45.455 7.06 0.00 40.51 3.34
386 387 3.929610 CAGTTCCTTTGACCGATTCTCTC 59.070 47.826 0.00 0.00 0.00 3.20
387 388 3.307059 CCAGTTCCTTTGACCGATTCTCT 60.307 47.826 0.00 0.00 0.00 3.10
388 389 3.003480 CCAGTTCCTTTGACCGATTCTC 58.997 50.000 0.00 0.00 0.00 2.87
389 390 2.290323 CCCAGTTCCTTTGACCGATTCT 60.290 50.000 0.00 0.00 0.00 2.40
390 391 2.084546 CCCAGTTCCTTTGACCGATTC 58.915 52.381 0.00 0.00 0.00 2.52
391 392 1.886655 GCCCAGTTCCTTTGACCGATT 60.887 52.381 0.00 0.00 0.00 3.34
392 393 0.322546 GCCCAGTTCCTTTGACCGAT 60.323 55.000 0.00 0.00 0.00 4.18
393 394 1.072505 GCCCAGTTCCTTTGACCGA 59.927 57.895 0.00 0.00 0.00 4.69
394 395 1.971695 GGCCCAGTTCCTTTGACCG 60.972 63.158 0.00 0.00 0.00 4.79
395 396 0.178961 AAGGCCCAGTTCCTTTGACC 60.179 55.000 0.00 0.00 40.87 4.02
396 397 2.224793 ACTAAGGCCCAGTTCCTTTGAC 60.225 50.000 0.00 0.00 40.87 3.18
397 398 2.039879 GACTAAGGCCCAGTTCCTTTGA 59.960 50.000 8.91 0.00 40.87 2.69
398 399 2.224769 TGACTAAGGCCCAGTTCCTTTG 60.225 50.000 8.91 1.08 40.87 2.77
399 400 2.040412 CTGACTAAGGCCCAGTTCCTTT 59.960 50.000 8.91 0.00 40.87 3.11
400 401 1.630878 CTGACTAAGGCCCAGTTCCTT 59.369 52.381 8.91 0.00 45.29 3.36
401 402 1.203313 TCTGACTAAGGCCCAGTTCCT 60.203 52.381 8.91 0.00 34.90 3.36
402 403 1.208293 CTCTGACTAAGGCCCAGTTCC 59.792 57.143 8.91 0.00 0.00 3.62
403 404 1.208293 CCTCTGACTAAGGCCCAGTTC 59.792 57.143 8.91 4.01 0.00 3.01
404 405 1.280457 CCTCTGACTAAGGCCCAGTT 58.720 55.000 8.91 0.00 0.00 3.16
405 406 0.117340 ACCTCTGACTAAGGCCCAGT 59.883 55.000 7.32 7.32 37.42 4.00
406 407 0.539051 CACCTCTGACTAAGGCCCAG 59.461 60.000 0.00 0.00 37.42 4.45
407 408 0.909610 CCACCTCTGACTAAGGCCCA 60.910 60.000 0.00 0.00 37.42 5.36
408 409 1.908483 CCACCTCTGACTAAGGCCC 59.092 63.158 0.00 0.00 37.42 5.80
409 410 1.222113 GCCACCTCTGACTAAGGCC 59.778 63.158 0.00 0.00 37.42 5.19
410 411 0.107945 CTGCCACCTCTGACTAAGGC 60.108 60.000 0.00 0.00 42.32 4.35
411 412 0.539051 CCTGCCACCTCTGACTAAGG 59.461 60.000 0.00 0.00 39.96 2.69
412 413 1.270907 ACCTGCCACCTCTGACTAAG 58.729 55.000 0.00 0.00 0.00 2.18
413 414 1.729586 AACCTGCCACCTCTGACTAA 58.270 50.000 0.00 0.00 0.00 2.24
414 415 1.623811 GAAACCTGCCACCTCTGACTA 59.376 52.381 0.00 0.00 0.00 2.59
415 416 0.398318 GAAACCTGCCACCTCTGACT 59.602 55.000 0.00 0.00 0.00 3.41
416 417 0.951040 CGAAACCTGCCACCTCTGAC 60.951 60.000 0.00 0.00 0.00 3.51
417 418 1.371183 CGAAACCTGCCACCTCTGA 59.629 57.895 0.00 0.00 0.00 3.27
418 419 0.320374 TACGAAACCTGCCACCTCTG 59.680 55.000 0.00 0.00 0.00 3.35
419 420 0.608640 CTACGAAACCTGCCACCTCT 59.391 55.000 0.00 0.00 0.00 3.69
420 421 0.391263 CCTACGAAACCTGCCACCTC 60.391 60.000 0.00 0.00 0.00 3.85
421 422 1.677552 CCTACGAAACCTGCCACCT 59.322 57.895 0.00 0.00 0.00 4.00
422 423 2.038837 GCCTACGAAACCTGCCACC 61.039 63.158 0.00 0.00 0.00 4.61
423 424 0.605589 AAGCCTACGAAACCTGCCAC 60.606 55.000 0.00 0.00 0.00 5.01
424 425 0.109723 AAAGCCTACGAAACCTGCCA 59.890 50.000 0.00 0.00 0.00 4.92
425 426 2.007608 CTAAAGCCTACGAAACCTGCC 58.992 52.381 0.00 0.00 0.00 4.85
426 427 2.007608 CCTAAAGCCTACGAAACCTGC 58.992 52.381 0.00 0.00 0.00 4.85
427 428 2.007608 GCCTAAAGCCTACGAAACCTG 58.992 52.381 0.00 0.00 34.35 4.00
428 429 1.907255 AGCCTAAAGCCTACGAAACCT 59.093 47.619 0.00 0.00 45.47 3.50
429 430 2.007608 CAGCCTAAAGCCTACGAAACC 58.992 52.381 0.00 0.00 45.47 3.27
430 431 2.007608 CCAGCCTAAAGCCTACGAAAC 58.992 52.381 0.00 0.00 45.47 2.78
431 432 1.626825 ACCAGCCTAAAGCCTACGAAA 59.373 47.619 0.00 0.00 45.47 3.46
432 433 1.272807 ACCAGCCTAAAGCCTACGAA 58.727 50.000 0.00 0.00 45.47 3.85
433 434 1.066430 CAACCAGCCTAAAGCCTACGA 60.066 52.381 0.00 0.00 45.47 3.43
434 435 1.338769 ACAACCAGCCTAAAGCCTACG 60.339 52.381 0.00 0.00 45.47 3.51
435 436 2.491675 ACAACCAGCCTAAAGCCTAC 57.508 50.000 0.00 0.00 45.47 3.18
436 437 4.226394 TCATTACAACCAGCCTAAAGCCTA 59.774 41.667 0.00 0.00 45.47 3.93
437 438 3.010138 TCATTACAACCAGCCTAAAGCCT 59.990 43.478 0.00 0.00 45.47 4.58
438 439 3.352648 TCATTACAACCAGCCTAAAGCC 58.647 45.455 0.00 0.00 45.47 4.35
439 440 4.261801 TCTCATTACAACCAGCCTAAAGC 58.738 43.478 0.00 0.00 44.25 3.51
440 441 5.491982 ACTCTCATTACAACCAGCCTAAAG 58.508 41.667 0.00 0.00 0.00 1.85
441 442 5.499004 ACTCTCATTACAACCAGCCTAAA 57.501 39.130 0.00 0.00 0.00 1.85
442 443 6.382859 TGATACTCTCATTACAACCAGCCTAA 59.617 38.462 0.00 0.00 0.00 2.69
443 444 5.897250 TGATACTCTCATTACAACCAGCCTA 59.103 40.000 0.00 0.00 0.00 3.93
444 445 4.716784 TGATACTCTCATTACAACCAGCCT 59.283 41.667 0.00 0.00 0.00 4.58
445 446 5.023533 TGATACTCTCATTACAACCAGCC 57.976 43.478 0.00 0.00 0.00 4.85
446 447 6.367422 GCTATGATACTCTCATTACAACCAGC 59.633 42.308 0.00 0.00 42.07 4.85
447 448 7.665690 AGCTATGATACTCTCATTACAACCAG 58.334 38.462 0.00 0.00 42.07 4.00
448 449 7.603180 AGCTATGATACTCTCATTACAACCA 57.397 36.000 0.00 0.00 42.07 3.67
462 463 9.987272 TGGCATGTATGATATTAGCTATGATAC 57.013 33.333 0.00 0.00 37.40 2.24
464 465 9.334947 GTTGGCATGTATGATATTAGCTATGAT 57.665 33.333 0.00 0.00 0.00 2.45
465 466 8.542926 AGTTGGCATGTATGATATTAGCTATGA 58.457 33.333 0.00 0.00 0.00 2.15
466 467 8.728337 AGTTGGCATGTATGATATTAGCTATG 57.272 34.615 0.00 0.00 0.00 2.23
468 469 8.478066 CCTAGTTGGCATGTATGATATTAGCTA 58.522 37.037 0.00 0.00 0.00 3.32
469 470 7.334090 CCTAGTTGGCATGTATGATATTAGCT 58.666 38.462 0.00 0.00 0.00 3.32
470 471 7.545362 CCTAGTTGGCATGTATGATATTAGC 57.455 40.000 0.00 0.00 0.00 3.09
486 487 3.441572 CCTCATCAAAGTTGCCTAGTTGG 59.558 47.826 0.00 0.00 39.35 3.77
487 488 4.074970 ACCTCATCAAAGTTGCCTAGTTG 58.925 43.478 0.00 0.00 0.00 3.16
488 489 4.074970 CACCTCATCAAAGTTGCCTAGTT 58.925 43.478 0.00 0.00 0.00 2.24
489 490 3.560025 CCACCTCATCAAAGTTGCCTAGT 60.560 47.826 0.00 0.00 0.00 2.57
490 491 3.012518 CCACCTCATCAAAGTTGCCTAG 58.987 50.000 0.00 0.00 0.00 3.02
491 492 2.879756 GCCACCTCATCAAAGTTGCCTA 60.880 50.000 0.00 0.00 0.00 3.93
492 493 1.915141 CCACCTCATCAAAGTTGCCT 58.085 50.000 0.00 0.00 0.00 4.75
493 494 0.244721 GCCACCTCATCAAAGTTGCC 59.755 55.000 0.00 0.00 0.00 4.52
494 495 0.961019 TGCCACCTCATCAAAGTTGC 59.039 50.000 0.00 0.00 0.00 4.17
495 496 5.389859 TTTATGCCACCTCATCAAAGTTG 57.610 39.130 0.00 0.00 0.00 3.16
496 497 6.610075 ATTTTATGCCACCTCATCAAAGTT 57.390 33.333 0.00 0.00 0.00 2.66
497 498 6.610075 AATTTTATGCCACCTCATCAAAGT 57.390 33.333 0.00 0.00 0.00 2.66
498 499 9.603921 ATTTAATTTTATGCCACCTCATCAAAG 57.396 29.630 0.00 0.00 0.00 2.77
499 500 9.381033 CATTTAATTTTATGCCACCTCATCAAA 57.619 29.630 0.00 0.00 0.00 2.69
500 501 8.756927 TCATTTAATTTTATGCCACCTCATCAA 58.243 29.630 0.00 0.00 0.00 2.57
501 502 8.303780 TCATTTAATTTTATGCCACCTCATCA 57.696 30.769 0.00 0.00 0.00 3.07
502 503 9.252962 CTTCATTTAATTTTATGCCACCTCATC 57.747 33.333 0.00 0.00 0.00 2.92
503 504 8.761689 ACTTCATTTAATTTTATGCCACCTCAT 58.238 29.630 0.00 0.00 0.00 2.90
504 505 8.133024 ACTTCATTTAATTTTATGCCACCTCA 57.867 30.769 0.00 0.00 0.00 3.86
522 523 9.249053 TGATACTCAACTCTCTCTTACTTCATT 57.751 33.333 0.00 0.00 0.00 2.57
523 524 8.815565 TGATACTCAACTCTCTCTTACTTCAT 57.184 34.615 0.00 0.00 0.00 2.57
524 525 8.815565 ATGATACTCAACTCTCTCTTACTTCA 57.184 34.615 0.00 0.00 0.00 3.02
530 531 9.585369 TCATGATATGATACTCAACTCTCTCTT 57.415 33.333 0.00 0.00 33.59 2.85
558 559 9.856488 CTAGTGTAGCATTTATTATGATACGGT 57.144 33.333 8.18 0.00 42.05 4.83
559 560 9.856488 ACTAGTGTAGCATTTATTATGATACGG 57.144 33.333 0.00 2.94 42.05 4.02
576 577 9.976056 TGCCATGCATGACACATACTAGTGTAG 62.976 44.444 28.31 5.81 42.57 2.74
577 578 8.307927 TGCCATGCATGACACATACTAGTGTA 62.308 42.308 28.31 2.94 42.57 2.90
578 579 7.601456 TGCCATGCATGACACATACTAGTGT 62.601 44.000 28.31 0.00 44.07 3.55
579 580 3.249320 GCCATGCATGACACATACTAGTG 59.751 47.826 28.31 7.28 44.93 2.74
580 581 3.118298 TGCCATGCATGACACATACTAGT 60.118 43.478 28.31 0.00 31.71 2.57
581 582 3.469739 TGCCATGCATGACACATACTAG 58.530 45.455 28.31 8.01 31.71 2.57
582 583 3.557228 TGCCATGCATGACACATACTA 57.443 42.857 28.31 0.00 31.71 1.82
583 584 2.423446 TGCCATGCATGACACATACT 57.577 45.000 28.31 0.00 31.71 2.12
584 585 3.720949 ATTGCCATGCATGACACATAC 57.279 42.857 28.31 8.36 38.76 2.39
585 586 5.848833 TTTATTGCCATGCATGACACATA 57.151 34.783 28.31 17.78 38.76 2.29
586 587 4.739587 TTTATTGCCATGCATGACACAT 57.260 36.364 28.31 18.68 38.76 3.21
587 588 4.739587 ATTTATTGCCATGCATGACACA 57.260 36.364 28.31 18.81 38.76 3.72
588 589 6.979817 TCTTTATTTATTGCCATGCATGACAC 59.020 34.615 28.31 16.49 38.76 3.67
589 590 6.979817 GTCTTTATTTATTGCCATGCATGACA 59.020 34.615 28.31 20.53 38.76 3.58
590 591 6.979817 TGTCTTTATTTATTGCCATGCATGAC 59.020 34.615 28.31 17.77 38.76 3.06
591 592 7.110043 TGTCTTTATTTATTGCCATGCATGA 57.890 32.000 28.31 8.76 38.76 3.07
592 593 7.870954 AGATGTCTTTATTTATTGCCATGCATG 59.129 33.333 20.19 20.19 38.76 4.06
593 594 7.959175 AGATGTCTTTATTTATTGCCATGCAT 58.041 30.769 0.00 0.00 38.76 3.96
594 595 7.350744 AGATGTCTTTATTTATTGCCATGCA 57.649 32.000 0.00 0.00 36.47 3.96
595 596 9.350357 CATAGATGTCTTTATTTATTGCCATGC 57.650 33.333 0.00 0.00 0.00 4.06
624 625 8.928448 CCCTAATGCATAGTATCATATGGTAGT 58.072 37.037 8.39 8.39 34.35 2.73
625 626 9.147732 TCCCTAATGCATAGTATCATATGGTAG 57.852 37.037 0.00 0.00 34.35 3.18
626 627 9.147732 CTCCCTAATGCATAGTATCATATGGTA 57.852 37.037 0.00 0.00 34.35 3.25
627 628 7.625280 ACTCCCTAATGCATAGTATCATATGGT 59.375 37.037 0.00 0.00 34.35 3.55
628 629 8.027524 ACTCCCTAATGCATAGTATCATATGG 57.972 38.462 0.00 0.00 34.35 2.74
631 632 9.936329 TGATACTCCCTAATGCATAGTATCATA 57.064 33.333 29.08 17.18 46.99 2.15
632 633 8.844865 TGATACTCCCTAATGCATAGTATCAT 57.155 34.615 29.08 10.82 46.99 2.45
637 638 9.944079 AGTATATGATACTCCCTAATGCATAGT 57.056 33.333 0.00 1.40 0.00 2.12
640 641 8.865090 GCTAGTATATGATACTCCCTAATGCAT 58.135 37.037 2.44 0.00 0.00 3.96
641 642 7.839200 TGCTAGTATATGATACTCCCTAATGCA 59.161 37.037 2.44 0.00 0.00 3.96
642 643 8.138712 GTGCTAGTATATGATACTCCCTAATGC 58.861 40.741 2.44 0.00 0.00 3.56
643 644 8.346300 CGTGCTAGTATATGATACTCCCTAATG 58.654 40.741 2.44 0.00 0.00 1.90
644 645 8.053963 ACGTGCTAGTATATGATACTCCCTAAT 58.946 37.037 2.44 0.00 0.00 1.73
645 646 7.400439 ACGTGCTAGTATATGATACTCCCTAA 58.600 38.462 2.44 0.00 0.00 2.69
646 647 6.955364 ACGTGCTAGTATATGATACTCCCTA 58.045 40.000 2.44 0.00 0.00 3.53
647 648 5.817784 ACGTGCTAGTATATGATACTCCCT 58.182 41.667 2.44 0.00 0.00 4.20
648 649 6.150641 TGAACGTGCTAGTATATGATACTCCC 59.849 42.308 2.44 0.00 0.00 4.30
649 650 7.119407 TCTGAACGTGCTAGTATATGATACTCC 59.881 40.741 2.44 0.00 0.00 3.85
650 651 8.030744 TCTGAACGTGCTAGTATATGATACTC 57.969 38.462 2.44 0.00 0.00 2.59
651 652 7.981102 TCTGAACGTGCTAGTATATGATACT 57.019 36.000 0.00 4.63 0.00 2.12
652 653 8.451748 TCATCTGAACGTGCTAGTATATGATAC 58.548 37.037 0.00 0.00 0.00 2.24
653 654 8.561738 TCATCTGAACGTGCTAGTATATGATA 57.438 34.615 0.00 0.00 0.00 2.15
654 655 7.454260 TCATCTGAACGTGCTAGTATATGAT 57.546 36.000 0.00 0.00 0.00 2.45
655 656 6.877611 TCATCTGAACGTGCTAGTATATGA 57.122 37.500 0.00 0.00 0.00 2.15
656 657 8.454894 ACTATCATCTGAACGTGCTAGTATATG 58.545 37.037 0.00 0.00 28.63 1.78
657 658 8.568676 ACTATCATCTGAACGTGCTAGTATAT 57.431 34.615 0.00 0.00 28.63 0.86
658 659 7.981102 ACTATCATCTGAACGTGCTAGTATA 57.019 36.000 0.00 0.00 28.63 1.47
659 660 6.885952 ACTATCATCTGAACGTGCTAGTAT 57.114 37.500 0.00 0.00 28.63 2.12
660 661 7.660208 TGATACTATCATCTGAACGTGCTAGTA 59.340 37.037 0.00 0.00 35.36 1.82
661 662 6.486993 TGATACTATCATCTGAACGTGCTAGT 59.513 38.462 0.00 0.00 33.59 2.57
662 663 6.903419 TGATACTATCATCTGAACGTGCTAG 58.097 40.000 0.00 0.00 33.59 3.42
663 664 6.877611 TGATACTATCATCTGAACGTGCTA 57.122 37.500 0.00 0.00 33.59 3.49
664 665 5.774498 TGATACTATCATCTGAACGTGCT 57.226 39.130 0.00 0.00 33.59 4.40
665 666 9.227490 GTATATGATACTATCATCTGAACGTGC 57.773 37.037 13.83 0.00 46.62 5.34
690 691 9.928618 ACTGCCATATGATACTATGATACTAGT 57.071 33.333 3.65 0.00 36.04 2.57
737 738 9.804758 GGGTAGTATCATAAGTTAGTATCATGC 57.195 37.037 0.00 0.00 0.00 4.06
747 748 8.774183 TGGTTGTAATGGGTAGTATCATAAGTT 58.226 33.333 0.00 0.00 0.00 2.66
748 749 8.326765 TGGTTGTAATGGGTAGTATCATAAGT 57.673 34.615 0.00 0.00 0.00 2.24
749 750 7.387948 GCTGGTTGTAATGGGTAGTATCATAAG 59.612 40.741 0.00 0.00 0.00 1.73
750 751 7.221450 GCTGGTTGTAATGGGTAGTATCATAA 58.779 38.462 0.00 0.00 0.00 1.90
751 752 6.239772 GGCTGGTTGTAATGGGTAGTATCATA 60.240 42.308 0.00 0.00 0.00 2.15
752 753 5.456186 GGCTGGTTGTAATGGGTAGTATCAT 60.456 44.000 0.00 0.00 0.00 2.45
753 754 4.141574 GGCTGGTTGTAATGGGTAGTATCA 60.142 45.833 0.00 0.00 0.00 2.15
754 755 4.102681 AGGCTGGTTGTAATGGGTAGTATC 59.897 45.833 0.00 0.00 0.00 2.24
755 756 4.045022 AGGCTGGTTGTAATGGGTAGTAT 58.955 43.478 0.00 0.00 0.00 2.12
756 757 3.456842 AGGCTGGTTGTAATGGGTAGTA 58.543 45.455 0.00 0.00 0.00 1.82
757 758 2.275466 AGGCTGGTTGTAATGGGTAGT 58.725 47.619 0.00 0.00 0.00 2.73
758 759 3.366052 AAGGCTGGTTGTAATGGGTAG 57.634 47.619 0.00 0.00 0.00 3.18
759 760 3.847780 AGTAAGGCTGGTTGTAATGGGTA 59.152 43.478 0.00 0.00 0.00 3.69
760 761 2.647802 AGTAAGGCTGGTTGTAATGGGT 59.352 45.455 0.00 0.00 0.00 4.51
761 762 3.366052 AGTAAGGCTGGTTGTAATGGG 57.634 47.619 0.00 0.00 0.00 4.00
762 763 3.877508 GCTAGTAAGGCTGGTTGTAATGG 59.122 47.826 0.00 0.00 0.00 3.16
763 764 4.332819 GTGCTAGTAAGGCTGGTTGTAATG 59.667 45.833 0.00 0.00 0.00 1.90
764 765 4.514401 GTGCTAGTAAGGCTGGTTGTAAT 58.486 43.478 0.00 0.00 0.00 1.89
765 766 3.615592 CGTGCTAGTAAGGCTGGTTGTAA 60.616 47.826 0.00 0.00 0.00 2.41
766 767 2.094390 CGTGCTAGTAAGGCTGGTTGTA 60.094 50.000 0.00 0.00 0.00 2.41
767 768 1.337823 CGTGCTAGTAAGGCTGGTTGT 60.338 52.381 0.00 0.00 0.00 3.32
768 769 1.337823 ACGTGCTAGTAAGGCTGGTTG 60.338 52.381 0.00 0.00 0.00 3.77
769 770 0.974383 ACGTGCTAGTAAGGCTGGTT 59.026 50.000 0.00 0.00 0.00 3.67
770 771 0.974383 AACGTGCTAGTAAGGCTGGT 59.026 50.000 0.00 0.00 0.00 4.00
771 772 1.641577 GAACGTGCTAGTAAGGCTGG 58.358 55.000 0.00 0.00 0.00 4.85
772 773 1.269166 CGAACGTGCTAGTAAGGCTG 58.731 55.000 0.00 0.00 0.00 4.85
773 774 0.886563 ACGAACGTGCTAGTAAGGCT 59.113 50.000 0.00 0.00 0.00 4.58
776 777 6.140422 GCTAGAATTACGAACGTGCTAGTAAG 59.860 42.308 10.14 0.00 33.35 2.34
780 781 4.348656 TGCTAGAATTACGAACGTGCTAG 58.651 43.478 10.14 13.98 0.00 3.42
832 834 4.459089 GGCTCACCTGCTCGGGTC 62.459 72.222 0.00 0.00 37.52 4.46
879 881 3.654020 GATCCCGCGCTCCATTGC 61.654 66.667 5.56 0.00 0.00 3.56
954 956 5.334414 CGTACCCGCTTTTATATAGTCGAGT 60.334 44.000 0.00 0.00 0.00 4.18
956 958 4.754618 TCGTACCCGCTTTTATATAGTCGA 59.245 41.667 0.00 0.00 0.00 4.20
959 961 4.279169 TGCTCGTACCCGCTTTTATATAGT 59.721 41.667 3.14 0.00 0.00 2.12
975 977 2.353958 AGGACCTCGGTGCTCGTA 59.646 61.111 4.10 0.00 43.22 3.43
985 988 2.048127 GTGTGGCACGAGGACCTC 60.048 66.667 13.77 11.87 0.00 3.85
988 991 0.737715 GATGAGTGTGGCACGAGGAC 60.738 60.000 13.77 5.39 39.64 3.85
1026 1030 2.832201 GCTGCAAGAGGATGGGGC 60.832 66.667 0.00 0.00 34.07 5.80
1027 1031 2.515523 CGCTGCAAGAGGATGGGG 60.516 66.667 0.00 0.00 34.07 4.96
1045 1049 1.153756 AAGGTTGCTTGGGTGAGGG 59.846 57.895 0.00 0.00 0.00 4.30
1062 1066 1.499502 CGTGTGTGTGTGTGTGCAA 59.500 52.632 0.00 0.00 0.00 4.08
1065 1069 1.016653 TCACCGTGTGTGTGTGTGTG 61.017 55.000 0.00 0.00 45.61 3.82
1066 1070 1.017177 GTCACCGTGTGTGTGTGTGT 61.017 55.000 0.00 0.00 45.61 3.72
1067 1071 1.701545 GGTCACCGTGTGTGTGTGTG 61.702 60.000 0.00 0.00 45.61 3.82
1068 1072 1.448893 GGTCACCGTGTGTGTGTGT 60.449 57.895 0.00 0.00 45.61 3.72
1125 1129 1.447643 CTTCTGTAGCCATCCCCGG 59.552 63.158 0.00 0.00 0.00 5.73
1248 1255 1.227497 GCTCCCTCTTCATCCGCTG 60.227 63.158 0.00 0.00 0.00 5.18
1342 1349 0.179145 CTAAGCCGTACACCTGGTCG 60.179 60.000 0.00 0.00 0.00 4.79
1391 1398 2.951745 GTCGATCGACCTGCAGCG 60.952 66.667 33.06 7.89 39.08 5.18
1413 1420 2.690778 GCCACAACACCAGATCGCC 61.691 63.158 0.00 0.00 0.00 5.54
1414 1421 1.965930 TGCCACAACACCAGATCGC 60.966 57.895 0.00 0.00 0.00 4.58
1434 1441 3.476295 TGATTGATTTTGAGCGCTCAC 57.524 42.857 38.36 26.48 39.66 3.51
1467 1474 3.428452 CCAAGCAAAGATGGCATACACTG 60.428 47.826 0.00 0.00 0.00 3.66
1468 1475 2.756760 CCAAGCAAAGATGGCATACACT 59.243 45.455 0.00 0.00 0.00 3.55
1469 1476 3.155093 CCAAGCAAAGATGGCATACAC 57.845 47.619 0.00 0.00 0.00 2.90
1520 1527 1.545582 TCCCAAAAGCAGCTTACATGC 59.454 47.619 8.45 0.00 44.18 4.06
1521 1528 3.367703 CCTTCCCAAAAGCAGCTTACATG 60.368 47.826 8.45 8.19 0.00 3.21
1522 1529 2.827921 CCTTCCCAAAAGCAGCTTACAT 59.172 45.455 8.45 0.00 0.00 2.29
1523 1530 2.238521 CCTTCCCAAAAGCAGCTTACA 58.761 47.619 8.45 0.00 0.00 2.41
1524 1531 1.067565 GCCTTCCCAAAAGCAGCTTAC 60.068 52.381 8.45 0.00 0.00 2.34
1574 1587 6.013639 ACAATAGGGTGAGCAACTACTTAAGT 60.014 38.462 13.68 13.68 41.49 2.24
1710 1725 4.402793 ACTCTCGAGTAATTATGGCTGTGT 59.597 41.667 13.13 0.00 40.43 3.72
1711 1726 4.938080 ACTCTCGAGTAATTATGGCTGTG 58.062 43.478 13.13 0.00 40.43 3.66
1712 1727 4.038162 GGACTCTCGAGTAATTATGGCTGT 59.962 45.833 13.13 0.00 42.66 4.40
1838 1853 8.743085 ATCTTACAACACATCTTGCATCTAAT 57.257 30.769 0.00 0.00 0.00 1.73
1849 1864 7.482654 TGCTAGCAATATCTTACAACACATC 57.517 36.000 16.84 0.00 0.00 3.06
1959 1975 2.276201 TGACCGATTTATTCGCCACAG 58.724 47.619 0.00 0.00 46.71 3.66
1963 1979 4.545823 TGAAATGACCGATTTATTCGCC 57.454 40.909 0.00 0.00 46.71 5.54
1975 1991 9.343539 GCCCCTTATATATATCTTGAAATGACC 57.656 37.037 0.00 0.00 0.00 4.02
1983 1999 8.896744 CAACATGTGCCCCTTATATATATCTTG 58.103 37.037 0.00 0.00 0.00 3.02
2003 2019 4.811908 TGCCTCATTCATTTGTCAACATG 58.188 39.130 0.00 0.00 0.00 3.21
2004 2020 4.619863 GCTGCCTCATTCATTTGTCAACAT 60.620 41.667 0.00 0.00 0.00 2.71
2039 2055 9.988350 AAGATATCGCAACAACTAATTAGTTTG 57.012 29.630 24.99 21.78 43.57 2.93
2086 2105 4.643463 TGTTGGGTGTAATGTGTCGTAAT 58.357 39.130 0.00 0.00 0.00 1.89
2089 2108 2.623878 TGTTGGGTGTAATGTGTCGT 57.376 45.000 0.00 0.00 0.00 4.34
2110 2135 5.160699 ACGCAATAGACTAATGCAACATG 57.839 39.130 19.88 7.77 40.04 3.21
2244 2269 4.882671 AAATGATATTGGTCACTGCGAC 57.117 40.909 0.00 0.00 44.57 5.19
2307 2334 2.046892 GCGAGTGAGGTGTGCCAT 60.047 61.111 0.00 0.00 37.19 4.40
2311 2338 2.370281 ATACAAGCGAGTGAGGTGTG 57.630 50.000 0.00 0.00 0.00 3.82
2320 2347 6.236017 TCAAGTAACCAAAATACAAGCGAG 57.764 37.500 0.00 0.00 0.00 5.03
2324 2351 9.030301 CCTTTGTTCAAGTAACCAAAATACAAG 57.970 33.333 0.00 0.00 37.27 3.16
2344 2371 7.507616 TGAATTATTGTCCACCTTTACCTTTGT 59.492 33.333 0.00 0.00 0.00 2.83
2345 2372 7.891561 TGAATTATTGTCCACCTTTACCTTTG 58.108 34.615 0.00 0.00 0.00 2.77
2359 2386 7.985634 ATGTACCGCATTTTGAATTATTGTC 57.014 32.000 0.00 0.00 33.14 3.18
2375 2402 5.418310 AAATACATGCAGTTATGTACCGC 57.582 39.130 0.11 0.00 43.93 5.68
2593 2993 5.393678 GCAACAACCCAGACAAAGTTTTAGA 60.394 40.000 0.00 0.00 0.00 2.10
2594 2994 4.803613 GCAACAACCCAGACAAAGTTTTAG 59.196 41.667 0.00 0.00 0.00 1.85
2609 3009 4.176271 GCTCCTTTAATGATGCAACAACC 58.824 43.478 0.00 0.00 0.00 3.77
2623 3023 3.599412 GTGTGGACACGCTCCTTTA 57.401 52.632 8.64 0.00 40.26 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.