Multiple sequence alignment - TraesCS7B01G083900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G083900 chr7B 100.000 2957 0 0 1 2957 94609472 94606516 0.000000e+00 5461.0
1 TraesCS7B01G083900 chr7B 79.909 219 26 7 2197 2413 46037740 46037942 8.540000e-31 145.0
2 TraesCS7B01G083900 chr7B 79.612 206 38 4 2 205 562095224 562095427 8.540000e-31 145.0
3 TraesCS7B01G083900 chr7D 93.898 1737 62 21 476 2175 133321517 133319788 0.000000e+00 2580.0
4 TraesCS7B01G083900 chr7D 86.842 456 44 9 12 462 133321945 133321501 2.050000e-136 496.0
5 TraesCS7B01G083900 chr7D 74.531 373 70 16 1556 1926 133665186 133664837 3.970000e-29 139.0
6 TraesCS7B01G083900 chr7A 94.547 1522 46 19 688 2175 131870408 131868890 0.000000e+00 2316.0
7 TraesCS7B01G083900 chr7A 81.319 637 91 15 7 619 131871037 131870405 2.650000e-135 492.0
8 TraesCS7B01G083900 chr7A 78.000 200 41 3 7 204 344677506 344677308 4.000000e-24 122.0
9 TraesCS7B01G083900 chr5A 80.247 243 18 13 2186 2413 546203923 546203696 3.950000e-34 156.0
10 TraesCS7B01G083900 chr5A 81.183 186 22 6 2227 2411 706059551 706059378 1.430000e-28 137.0
11 TraesCS7B01G083900 chr3A 78.995 219 44 2 4 221 453670815 453671032 6.600000e-32 148.0
12 TraesCS7B01G083900 chr3B 79.612 206 29 8 30 233 317624100 317623906 5.140000e-28 135.0
13 TraesCS7B01G083900 chr3B 87.500 80 8 2 66 144 6157928 6158006 1.130000e-14 91.6
14 TraesCS7B01G083900 chr6A 79.293 198 36 5 2 196 106081346 106081541 1.850000e-27 134.0
15 TraesCS7B01G083900 chr6A 80.392 102 17 3 1 100 71652789 71652689 1.140000e-09 75.0
16 TraesCS7B01G083900 chrUn 87.500 80 8 2 66 144 35981432 35981510 1.130000e-14 91.6
17 TraesCS7B01G083900 chr4D 78.740 127 25 2 5 130 32418799 32418674 1.890000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G083900 chr7B 94606516 94609472 2956 True 5461 5461 100.000 1 2957 1 chr7B.!!$R1 2956
1 TraesCS7B01G083900 chr7D 133319788 133321945 2157 True 1538 2580 90.370 12 2175 2 chr7D.!!$R2 2163
2 TraesCS7B01G083900 chr7A 131868890 131871037 2147 True 1404 2316 87.933 7 2175 2 chr7A.!!$R2 2168

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
986 1079 0.526524 CCAGAACCAGCTCGATCGTC 60.527 60.0 15.94 8.44 0.0 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2501 2607 0.03601 ACTGGAGCATGGAACTTCCG 60.036 55.0 3.28 0.0 40.17 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.265073 GGCATATCCAATTATTCTCGGCT 58.735 43.478 0.00 0.00 34.01 5.52
30 31 6.861065 TCCAATTATTCTCGGCTATCAAAC 57.139 37.500 0.00 0.00 0.00 2.93
39 40 3.006940 TCGGCTATCAAACCATGTCAAC 58.993 45.455 0.00 0.00 0.00 3.18
44 45 4.380867 GCTATCAAACCATGTCAACCCAAG 60.381 45.833 0.00 0.00 0.00 3.61
46 47 1.344114 CAAACCATGTCAACCCAAGGG 59.656 52.381 2.91 2.91 42.03 3.95
59 60 1.396653 CCAAGGGCCTAGATTGCTTG 58.603 55.000 6.41 5.65 0.00 4.01
63 64 4.464008 CAAGGGCCTAGATTGCTTGAATA 58.536 43.478 6.41 0.00 0.00 1.75
69 70 5.182760 GGCCTAGATTGCTTGAATAATGAGG 59.817 44.000 0.00 0.00 0.00 3.86
70 71 5.335504 GCCTAGATTGCTTGAATAATGAGGC 60.336 44.000 0.00 0.00 36.06 4.70
71 72 5.766670 CCTAGATTGCTTGAATAATGAGGCA 59.233 40.000 0.00 0.00 0.00 4.75
132 135 6.775939 ATCAATGTCTATGCTAATCACGTG 57.224 37.500 9.94 9.94 0.00 4.49
171 174 5.475909 GGTATCCTACCTCATATCAACGTGA 59.524 44.000 0.00 0.00 45.52 4.35
207 216 8.605947 CCTCTCTAATATTAACATGGATTGGGA 58.394 37.037 0.00 0.00 0.00 4.37
212 221 9.449719 CTAATATTAACATGGATTGGGAGTACC 57.550 37.037 0.00 0.00 40.81 3.34
273 283 4.962995 TCCAATTAATCCCGGCCATAAAAA 59.037 37.500 2.24 0.00 0.00 1.94
293 303 9.787532 ATAAAAACATTACAATCCAACGATCTG 57.212 29.630 0.00 0.00 0.00 2.90
440 452 7.732025 TGATATTCTACCCAATATCAACGTGT 58.268 34.615 11.68 0.00 46.10 4.49
444 456 8.603242 ATTCTACCCAATATCAACGTGTAATC 57.397 34.615 0.00 0.00 0.00 1.75
457 469 5.924475 ACGTGTAATCAACTTTCTTCCAG 57.076 39.130 0.00 0.00 0.00 3.86
462 474 8.543774 CGTGTAATCAACTTTCTTCCAGATATC 58.456 37.037 0.00 0.00 0.00 1.63
463 475 8.831550 GTGTAATCAACTTTCTTCCAGATATCC 58.168 37.037 0.00 0.00 0.00 2.59
464 476 7.993183 TGTAATCAACTTTCTTCCAGATATCCC 59.007 37.037 0.00 0.00 0.00 3.85
470 501 7.032598 ACTTTCTTCCAGATATCCCTCAAAA 57.967 36.000 0.00 0.00 0.00 2.44
563 598 7.659186 TGTACAAGTAACAACAAAACCACTTT 58.341 30.769 0.00 0.00 0.00 2.66
584 632 3.942130 TGCACCGATGGTATATCTCAG 57.058 47.619 0.00 0.00 32.11 3.35
594 642 4.878968 TGGTATATCTCAGTCCACCTTCA 58.121 43.478 0.00 0.00 0.00 3.02
626 674 8.160765 TGGTAAATCAACTAAGAAATCCAGTCA 58.839 33.333 0.00 0.00 0.00 3.41
665 714 4.095610 GGTCACAACACAAGAAAAACTCG 58.904 43.478 0.00 0.00 0.00 4.18
680 729 1.220206 CTCGGAGCATTCCACAGCT 59.780 57.895 0.00 0.00 44.26 4.24
708 757 3.064958 TGAAAATTGTTGCGGACACGTTA 59.935 39.130 0.00 0.00 43.45 3.18
737 800 1.224592 GGCACAGACATTCCCCGAT 59.775 57.895 0.00 0.00 0.00 4.18
751 814 2.147958 CCCCGATCAACGAACTCAAAA 58.852 47.619 0.00 0.00 45.77 2.44
934 998 4.318332 AGATCGACAAACTCATCAAGCAA 58.682 39.130 0.00 0.00 0.00 3.91
986 1079 0.526524 CCAGAACCAGCTCGATCGTC 60.527 60.000 15.94 8.44 0.00 4.20
1004 1100 0.035317 TCGATCCTGTATGCCATGGC 59.965 55.000 30.54 30.54 42.35 4.40
1366 1465 2.124653 GGGAGCTCCTCGACGAGA 60.125 66.667 31.36 11.08 35.95 4.04
1367 1466 2.474612 GGGAGCTCCTCGACGAGAC 61.475 68.421 31.36 14.35 35.95 3.36
1959 2058 0.038159 GCAGGACGCTTGTGTAGACT 60.038 55.000 0.00 0.00 37.77 3.24
1996 2095 0.463204 ATGGATGGTCTCGCACTCTG 59.537 55.000 0.00 0.00 0.00 3.35
2094 2200 5.703592 TGCATTTACTTGTTTGATCCGTACT 59.296 36.000 0.00 0.00 0.00 2.73
2131 2237 2.568956 TCTGAAGCAGCAGAGGTTGTAT 59.431 45.455 4.61 0.00 39.84 2.29
2185 2291 6.684686 CAGTATGCCAGGATATTCAATTTGG 58.315 40.000 0.00 0.00 0.00 3.28
2190 2296 5.540400 CCAGGATATTCAATTTGGCACAT 57.460 39.130 0.00 0.00 39.30 3.21
2191 2297 5.294356 CCAGGATATTCAATTTGGCACATG 58.706 41.667 0.00 0.00 39.30 3.21
2192 2298 5.069383 CCAGGATATTCAATTTGGCACATGA 59.931 40.000 0.00 0.00 39.30 3.07
2193 2299 6.239487 CCAGGATATTCAATTTGGCACATGAT 60.239 38.462 0.00 0.00 39.30 2.45
2194 2300 7.214381 CAGGATATTCAATTTGGCACATGATT 58.786 34.615 0.00 0.00 39.30 2.57
2195 2301 7.384115 CAGGATATTCAATTTGGCACATGATTC 59.616 37.037 0.00 0.00 39.30 2.52
2196 2302 7.289317 AGGATATTCAATTTGGCACATGATTCT 59.711 33.333 0.00 0.00 39.30 2.40
2197 2303 7.384115 GGATATTCAATTTGGCACATGATTCTG 59.616 37.037 0.00 0.00 39.30 3.02
2198 2304 3.852286 TCAATTTGGCACATGATTCTGC 58.148 40.909 0.00 0.00 39.30 4.26
2199 2305 2.572191 ATTTGGCACATGATTCTGCG 57.428 45.000 0.00 0.00 39.30 5.18
2200 2306 1.246649 TTTGGCACATGATTCTGCGT 58.753 45.000 0.00 0.00 39.30 5.24
2201 2307 0.522626 TTGGCACATGATTCTGCGTG 59.477 50.000 0.00 0.00 39.30 5.34
2202 2308 4.372235 GCACATGATTCTGCGTGC 57.628 55.556 0.00 8.99 46.85 5.34
2206 2312 3.745332 CACATGATTCTGCGTGCTAAA 57.255 42.857 0.00 0.00 0.00 1.85
2207 2313 4.082274 CACATGATTCTGCGTGCTAAAA 57.918 40.909 0.00 0.00 0.00 1.52
2208 2314 4.475028 CACATGATTCTGCGTGCTAAAAA 58.525 39.130 0.00 0.00 0.00 1.94
2209 2315 5.097529 CACATGATTCTGCGTGCTAAAAAT 58.902 37.500 0.00 0.00 0.00 1.82
2210 2316 5.004061 CACATGATTCTGCGTGCTAAAAATG 59.996 40.000 0.00 0.41 0.00 2.32
2211 2317 5.106197 ACATGATTCTGCGTGCTAAAAATGA 60.106 36.000 0.00 0.00 0.00 2.57
2212 2318 5.369685 TGATTCTGCGTGCTAAAAATGAA 57.630 34.783 0.00 0.00 0.00 2.57
2213 2319 5.953183 TGATTCTGCGTGCTAAAAATGAAT 58.047 33.333 0.00 0.00 0.00 2.57
2214 2320 6.389091 TGATTCTGCGTGCTAAAAATGAATT 58.611 32.000 0.00 0.00 0.00 2.17
2215 2321 6.867816 TGATTCTGCGTGCTAAAAATGAATTT 59.132 30.769 0.00 0.00 0.00 1.82
2216 2322 7.384660 TGATTCTGCGTGCTAAAAATGAATTTT 59.615 29.630 0.00 0.00 43.52 1.82
2217 2323 8.755696 ATTCTGCGTGCTAAAAATGAATTTTA 57.244 26.923 1.61 0.00 41.42 1.52
2218 2324 7.561237 TCTGCGTGCTAAAAATGAATTTTAC 57.439 32.000 1.61 0.00 41.42 2.01
2219 2325 6.304445 TCTGCGTGCTAAAAATGAATTTTACG 59.696 34.615 13.36 13.36 41.42 3.18
2220 2326 6.143496 TGCGTGCTAAAAATGAATTTTACGA 58.857 32.000 18.58 7.25 41.42 3.43
2221 2327 6.637254 TGCGTGCTAAAAATGAATTTTACGAA 59.363 30.769 18.58 10.23 41.42 3.85
2222 2328 7.327275 TGCGTGCTAAAAATGAATTTTACGAAT 59.673 29.630 18.58 1.98 41.42 3.34
2223 2329 7.626815 GCGTGCTAAAAATGAATTTTACGAATG 59.373 33.333 18.58 8.30 41.42 2.67
2224 2330 8.635124 CGTGCTAAAAATGAATTTTACGAATGT 58.365 29.630 12.75 0.00 41.42 2.71
2225 2331 9.937577 GTGCTAAAAATGAATTTTACGAATGTC 57.062 29.630 1.61 0.00 41.42 3.06
2226 2332 9.684448 TGCTAAAAATGAATTTTACGAATGTCA 57.316 25.926 1.61 0.00 41.42 3.58
2240 2346 9.658475 TTTACGAATGTCAAAAAGATAGTTGTG 57.342 29.630 0.00 0.00 33.08 3.33
2241 2347 7.259290 ACGAATGTCAAAAAGATAGTTGTGT 57.741 32.000 0.00 0.00 30.23 3.72
2242 2348 7.703328 ACGAATGTCAAAAAGATAGTTGTGTT 58.297 30.769 0.00 0.00 30.23 3.32
2243 2349 7.855904 ACGAATGTCAAAAAGATAGTTGTGTTC 59.144 33.333 0.00 0.00 30.23 3.18
2244 2350 7.855409 CGAATGTCAAAAAGATAGTTGTGTTCA 59.145 33.333 0.00 0.00 0.00 3.18
2245 2351 9.683069 GAATGTCAAAAAGATAGTTGTGTTCAT 57.317 29.630 0.00 0.00 0.00 2.57
2247 2353 8.854979 TGTCAAAAAGATAGTTGTGTTCATTG 57.145 30.769 0.00 0.00 0.00 2.82
2248 2354 8.465999 TGTCAAAAAGATAGTTGTGTTCATTGT 58.534 29.630 0.00 0.00 0.00 2.71
2249 2355 8.958043 GTCAAAAAGATAGTTGTGTTCATTGTC 58.042 33.333 0.00 0.00 0.00 3.18
2250 2356 8.681806 TCAAAAAGATAGTTGTGTTCATTGTCA 58.318 29.630 0.00 0.00 0.00 3.58
2251 2357 8.745837 CAAAAAGATAGTTGTGTTCATTGTCAC 58.254 33.333 7.43 7.43 35.43 3.67
2252 2358 7.566760 AAAGATAGTTGTGTTCATTGTCACA 57.433 32.000 11.21 11.21 41.81 3.58
2253 2359 6.545504 AGATAGTTGTGTTCATTGTCACAC 57.454 37.500 13.60 12.94 42.93 3.82
2267 2373 4.827304 TGTCACACACAAATGGTACATG 57.173 40.909 0.00 0.00 35.57 3.21
2268 2374 3.004210 TGTCACACACAAATGGTACATGC 59.996 43.478 0.00 0.00 35.57 4.06
2269 2375 5.463504 TGTCACACACAAATGGTACATGCA 61.464 41.667 0.00 0.00 35.57 3.96
2270 2376 6.894150 TGTCACACACAAATGGTACATGCAA 61.894 40.000 0.00 0.00 35.57 4.08
2271 2377 8.292011 TGTCACACACAAATGGTACATGCAAA 62.292 38.462 0.00 0.00 35.57 3.68
2272 2378 9.507033 TGTCACACACAAATGGTACATGCAAAT 62.507 37.037 0.00 0.00 35.57 2.32
2292 2398 7.840981 CAAATTTGCAGGTGAAAATTTAAGC 57.159 32.000 17.39 0.00 46.27 3.09
2293 2399 7.416022 CAAATTTGCAGGTGAAAATTTAAGCA 58.584 30.769 17.39 0.00 46.27 3.91
2294 2400 7.748691 AATTTGCAGGTGAAAATTTAAGCAT 57.251 28.000 3.17 0.00 39.59 3.79
2295 2401 7.748691 ATTTGCAGGTGAAAATTTAAGCATT 57.251 28.000 0.00 0.00 29.06 3.56
2296 2402 7.565323 TTTGCAGGTGAAAATTTAAGCATTT 57.435 28.000 0.00 0.00 0.00 2.32
2297 2403 7.565323 TTGCAGGTGAAAATTTAAGCATTTT 57.435 28.000 0.00 0.00 38.75 1.82
2298 2404 6.957150 TGCAGGTGAAAATTTAAGCATTTTG 58.043 32.000 3.19 0.00 36.64 2.44
2299 2405 6.765036 TGCAGGTGAAAATTTAAGCATTTTGA 59.235 30.769 3.19 0.00 36.64 2.69
2300 2406 7.071414 GCAGGTGAAAATTTAAGCATTTTGAC 58.929 34.615 3.19 4.98 38.68 3.18
2304 2410 8.141835 GTGAAAATTTAAGCATTTTGACCTGT 57.858 30.769 3.19 0.00 35.42 4.00
2305 2411 8.063630 GTGAAAATTTAAGCATTTTGACCTGTG 58.936 33.333 3.19 0.00 35.42 3.66
2306 2412 6.544038 AAATTTAAGCATTTTGACCTGTGC 57.456 33.333 0.00 0.00 37.84 4.57
2307 2413 4.662468 TTTAAGCATTTTGACCTGTGCA 57.338 36.364 0.00 0.00 39.94 4.57
2308 2414 2.514205 AAGCATTTTGACCTGTGCAC 57.486 45.000 10.75 10.75 39.94 4.57
2309 2415 1.401761 AGCATTTTGACCTGTGCACA 58.598 45.000 20.37 20.37 39.94 4.57
2310 2416 1.755959 AGCATTTTGACCTGTGCACAA 59.244 42.857 21.98 4.04 39.94 3.33
2311 2417 2.168106 AGCATTTTGACCTGTGCACAAA 59.832 40.909 21.98 11.43 39.94 2.83
2312 2418 2.935201 GCATTTTGACCTGTGCACAAAA 59.065 40.909 21.98 17.54 43.91 2.44
2313 2419 3.373439 GCATTTTGACCTGTGCACAAAAA 59.627 39.130 22.61 22.61 43.34 1.94
2335 2441 6.763303 AAAAAGTCGAATGCCAAATGTTAC 57.237 33.333 0.00 0.00 0.00 2.50
2336 2442 4.434713 AAGTCGAATGCCAAATGTTACC 57.565 40.909 0.00 0.00 0.00 2.85
2337 2443 3.686016 AGTCGAATGCCAAATGTTACCT 58.314 40.909 0.00 0.00 0.00 3.08
2338 2444 4.079253 AGTCGAATGCCAAATGTTACCTT 58.921 39.130 0.00 0.00 0.00 3.50
2339 2445 4.156008 AGTCGAATGCCAAATGTTACCTTC 59.844 41.667 0.00 0.00 0.00 3.46
2340 2446 4.075682 TCGAATGCCAAATGTTACCTTCA 58.924 39.130 0.00 0.00 0.00 3.02
2341 2447 4.520874 TCGAATGCCAAATGTTACCTTCAA 59.479 37.500 0.00 0.00 0.00 2.69
2342 2448 5.010112 TCGAATGCCAAATGTTACCTTCAAA 59.990 36.000 0.00 0.00 0.00 2.69
2343 2449 5.868801 CGAATGCCAAATGTTACCTTCAAAT 59.131 36.000 0.00 0.00 0.00 2.32
2344 2450 6.368516 CGAATGCCAAATGTTACCTTCAAATT 59.631 34.615 0.00 0.00 0.00 1.82
2345 2451 7.095271 CGAATGCCAAATGTTACCTTCAAATTT 60.095 33.333 0.00 0.00 0.00 1.82
2346 2452 8.462589 AATGCCAAATGTTACCTTCAAATTTT 57.537 26.923 0.00 0.00 0.00 1.82
2347 2453 9.566432 AATGCCAAATGTTACCTTCAAATTTTA 57.434 25.926 0.00 0.00 0.00 1.52
2348 2454 8.371770 TGCCAAATGTTACCTTCAAATTTTAC 57.628 30.769 0.00 0.00 0.00 2.01
2349 2455 7.987458 TGCCAAATGTTACCTTCAAATTTTACA 59.013 29.630 0.00 0.00 0.00 2.41
2350 2456 8.279800 GCCAAATGTTACCTTCAAATTTTACAC 58.720 33.333 0.00 0.00 0.00 2.90
2351 2457 9.541143 CCAAATGTTACCTTCAAATTTTACACT 57.459 29.630 0.00 0.00 0.00 3.55
2381 2487 4.454948 TTCACCGGTGAAGCACTG 57.545 55.556 39.59 11.99 43.90 3.66
2382 2488 1.891919 TTCACCGGTGAAGCACTGC 60.892 57.895 39.59 0.00 43.90 4.40
2383 2489 2.281070 CACCGGTGAAGCACTGCT 60.281 61.111 31.31 0.00 42.56 4.24
2384 2490 1.005037 CACCGGTGAAGCACTGCTA 60.005 57.895 31.31 0.00 38.25 3.49
2385 2491 0.391661 CACCGGTGAAGCACTGCTAT 60.392 55.000 31.31 0.00 38.25 2.97
2386 2492 0.108138 ACCGGTGAAGCACTGCTATC 60.108 55.000 6.12 5.27 38.25 2.08
2387 2493 0.811616 CCGGTGAAGCACTGCTATCC 60.812 60.000 3.33 6.49 38.25 2.59
2388 2494 0.811616 CGGTGAAGCACTGCTATCCC 60.812 60.000 3.33 3.55 38.25 3.85
2389 2495 0.253044 GGTGAAGCACTGCTATCCCA 59.747 55.000 3.33 0.00 38.25 4.37
2390 2496 1.133976 GGTGAAGCACTGCTATCCCAT 60.134 52.381 3.33 0.00 38.25 4.00
2391 2497 2.104792 GGTGAAGCACTGCTATCCCATA 59.895 50.000 3.33 0.00 38.25 2.74
2392 2498 3.244700 GGTGAAGCACTGCTATCCCATAT 60.245 47.826 3.33 0.00 38.25 1.78
2393 2499 4.020218 GGTGAAGCACTGCTATCCCATATA 60.020 45.833 3.33 0.00 38.25 0.86
2394 2500 5.174395 GTGAAGCACTGCTATCCCATATAG 58.826 45.833 3.33 0.00 38.25 1.31
2395 2501 3.902881 AGCACTGCTATCCCATATAGC 57.097 47.619 0.21 9.54 45.28 2.97
2406 2512 8.970859 GCTATCCCATATAGCATAGAAATTGT 57.029 34.615 11.21 0.00 44.64 2.71
2407 2513 9.050601 GCTATCCCATATAGCATAGAAATTGTC 57.949 37.037 11.21 0.00 44.64 3.18
2410 2516 8.853077 TCCCATATAGCATAGAAATTGTCAAG 57.147 34.615 0.00 0.00 0.00 3.02
2411 2517 7.391554 TCCCATATAGCATAGAAATTGTCAAGC 59.608 37.037 0.00 0.00 0.00 4.01
2412 2518 7.175467 CCCATATAGCATAGAAATTGTCAAGCA 59.825 37.037 0.00 0.00 0.00 3.91
2413 2519 8.235226 CCATATAGCATAGAAATTGTCAAGCAG 58.765 37.037 0.00 0.00 0.00 4.24
2414 2520 8.781196 CATATAGCATAGAAATTGTCAAGCAGT 58.219 33.333 0.00 0.00 0.00 4.40
2416 2522 8.915057 ATAGCATAGAAATTGTCAAGCAGTAT 57.085 30.769 0.00 0.00 0.00 2.12
2417 2523 7.636150 AGCATAGAAATTGTCAAGCAGTATT 57.364 32.000 0.00 0.00 0.00 1.89
2418 2524 8.737168 AGCATAGAAATTGTCAAGCAGTATTA 57.263 30.769 0.00 0.00 0.00 0.98
2419 2525 9.177608 AGCATAGAAATTGTCAAGCAGTATTAA 57.822 29.630 0.00 0.00 0.00 1.40
2420 2526 9.956720 GCATAGAAATTGTCAAGCAGTATTAAT 57.043 29.630 0.00 0.00 0.00 1.40
2424 2530 9.236006 AGAAATTGTCAAGCAGTATTAATGACT 57.764 29.630 0.00 0.00 40.70 3.41
2425 2531 9.846248 GAAATTGTCAAGCAGTATTAATGACTT 57.154 29.630 0.00 0.00 40.70 3.01
2427 2533 9.846248 AATTGTCAAGCAGTATTAATGACTTTC 57.154 29.630 0.00 0.00 40.70 2.62
2428 2534 7.377766 TGTCAAGCAGTATTAATGACTTTCC 57.622 36.000 0.00 0.00 40.70 3.13
2429 2535 6.939730 TGTCAAGCAGTATTAATGACTTTCCA 59.060 34.615 0.00 0.00 40.70 3.53
2430 2536 7.611467 TGTCAAGCAGTATTAATGACTTTCCAT 59.389 33.333 0.00 0.00 40.70 3.41
2431 2537 9.109393 GTCAAGCAGTATTAATGACTTTCCATA 57.891 33.333 0.00 0.00 37.87 2.74
2432 2538 9.109393 TCAAGCAGTATTAATGACTTTCCATAC 57.891 33.333 0.00 0.00 0.00 2.39
2433 2539 8.892723 CAAGCAGTATTAATGACTTTCCATACA 58.107 33.333 0.00 0.00 0.00 2.29
2434 2540 9.632638 AAGCAGTATTAATGACTTTCCATACAT 57.367 29.630 0.00 0.00 0.00 2.29
2435 2541 9.060347 AGCAGTATTAATGACTTTCCATACATG 57.940 33.333 0.00 0.00 0.00 3.21
2436 2542 8.840321 GCAGTATTAATGACTTTCCATACATGT 58.160 33.333 2.69 2.69 0.00 3.21
2445 2551 9.787532 ATGACTTTCCATACATGTTTATTTTCG 57.212 29.630 2.30 0.00 0.00 3.46
2446 2552 8.240682 TGACTTTCCATACATGTTTATTTTCGG 58.759 33.333 2.30 0.00 0.00 4.30
2447 2553 7.543756 ACTTTCCATACATGTTTATTTTCGGG 58.456 34.615 2.30 0.00 0.00 5.14
2448 2554 6.458232 TTCCATACATGTTTATTTTCGGGG 57.542 37.500 2.30 0.00 0.00 5.73
2449 2555 4.890581 TCCATACATGTTTATTTTCGGGGG 59.109 41.667 2.30 0.00 0.00 5.40
2450 2556 4.647399 CCATACATGTTTATTTTCGGGGGT 59.353 41.667 2.30 0.00 0.00 4.95
2451 2557 5.451242 CCATACATGTTTATTTTCGGGGGTG 60.451 44.000 2.30 0.00 0.00 4.61
2452 2558 2.232696 ACATGTTTATTTTCGGGGGTGC 59.767 45.455 0.00 0.00 0.00 5.01
2453 2559 2.296073 TGTTTATTTTCGGGGGTGCT 57.704 45.000 0.00 0.00 0.00 4.40
2454 2560 2.599677 TGTTTATTTTCGGGGGTGCTT 58.400 42.857 0.00 0.00 0.00 3.91
2455 2561 2.559231 TGTTTATTTTCGGGGGTGCTTC 59.441 45.455 0.00 0.00 0.00 3.86
2456 2562 2.823747 GTTTATTTTCGGGGGTGCTTCT 59.176 45.455 0.00 0.00 0.00 2.85
2457 2563 2.122783 TATTTTCGGGGGTGCTTCTG 57.877 50.000 0.00 0.00 0.00 3.02
2458 2564 0.404040 ATTTTCGGGGGTGCTTCTGA 59.596 50.000 0.00 0.00 0.00 3.27
2459 2565 0.183971 TTTTCGGGGGTGCTTCTGAA 59.816 50.000 0.00 0.00 0.00 3.02
2460 2566 0.536460 TTTCGGGGGTGCTTCTGAAC 60.536 55.000 0.00 0.00 0.00 3.18
2461 2567 1.701031 TTCGGGGGTGCTTCTGAACA 61.701 55.000 0.00 0.00 0.00 3.18
2462 2568 1.966451 CGGGGGTGCTTCTGAACAC 60.966 63.158 11.94 11.94 36.03 3.32
2463 2569 1.150536 GGGGGTGCTTCTGAACACA 59.849 57.895 18.15 5.28 38.57 3.72
2464 2570 1.172812 GGGGGTGCTTCTGAACACAC 61.173 60.000 18.15 15.91 39.55 3.82
2465 2571 0.179018 GGGGTGCTTCTGAACACACT 60.179 55.000 18.18 0.00 40.16 3.55
2466 2572 0.947244 GGGTGCTTCTGAACACACTG 59.053 55.000 18.15 0.00 37.23 3.66
2467 2573 1.668419 GGTGCTTCTGAACACACTGT 58.332 50.000 18.15 0.00 38.57 3.55
2468 2574 1.599542 GGTGCTTCTGAACACACTGTC 59.400 52.381 18.15 3.26 38.57 3.51
2469 2575 2.279741 GTGCTTCTGAACACACTGTCA 58.720 47.619 14.16 0.00 36.77 3.58
2470 2576 2.874701 GTGCTTCTGAACACACTGTCAT 59.125 45.455 14.16 0.00 36.77 3.06
2471 2577 3.313526 GTGCTTCTGAACACACTGTCATT 59.686 43.478 14.16 0.00 36.77 2.57
2472 2578 3.313249 TGCTTCTGAACACACTGTCATTG 59.687 43.478 0.00 0.00 0.00 2.82
2473 2579 3.561310 GCTTCTGAACACACTGTCATTGA 59.439 43.478 0.00 0.00 0.00 2.57
2474 2580 4.214971 GCTTCTGAACACACTGTCATTGAT 59.785 41.667 0.00 0.00 0.00 2.57
2475 2581 5.409520 GCTTCTGAACACACTGTCATTGATA 59.590 40.000 0.00 0.00 0.00 2.15
2476 2582 6.401903 GCTTCTGAACACACTGTCATTGATAG 60.402 42.308 8.70 8.70 0.00 2.08
2477 2583 6.345096 TCTGAACACACTGTCATTGATAGA 57.655 37.500 16.31 0.00 0.00 1.98
2478 2584 6.393171 TCTGAACACACTGTCATTGATAGAG 58.607 40.000 16.31 11.14 0.00 2.43
2479 2585 6.209391 TCTGAACACACTGTCATTGATAGAGA 59.791 38.462 16.31 4.89 0.00 3.10
2480 2586 6.393171 TGAACACACTGTCATTGATAGAGAG 58.607 40.000 16.31 9.86 33.05 3.20
2481 2587 5.336150 ACACACTGTCATTGATAGAGAGG 57.664 43.478 16.31 9.19 31.22 3.69
2482 2588 4.118410 CACACTGTCATTGATAGAGAGGC 58.882 47.826 16.31 0.00 31.22 4.70
2483 2589 3.181482 ACACTGTCATTGATAGAGAGGCG 60.181 47.826 16.31 1.77 31.22 5.52
2484 2590 3.067320 CACTGTCATTGATAGAGAGGCGA 59.933 47.826 16.31 0.00 31.22 5.54
2485 2591 3.894427 ACTGTCATTGATAGAGAGGCGAT 59.106 43.478 16.31 0.00 31.22 4.58
2486 2592 4.343526 ACTGTCATTGATAGAGAGGCGATT 59.656 41.667 16.31 0.00 31.22 3.34
2487 2593 5.536538 ACTGTCATTGATAGAGAGGCGATTA 59.463 40.000 16.31 0.00 31.22 1.75
2488 2594 6.040955 ACTGTCATTGATAGAGAGGCGATTAA 59.959 38.462 16.31 0.00 31.22 1.40
2489 2595 6.816136 TGTCATTGATAGAGAGGCGATTAAA 58.184 36.000 0.00 0.00 0.00 1.52
2490 2596 7.272244 TGTCATTGATAGAGAGGCGATTAAAA 58.728 34.615 0.00 0.00 0.00 1.52
2491 2597 7.768582 TGTCATTGATAGAGAGGCGATTAAAAA 59.231 33.333 0.00 0.00 0.00 1.94
2492 2598 8.778358 GTCATTGATAGAGAGGCGATTAAAAAT 58.222 33.333 0.00 0.00 0.00 1.82
2493 2599 8.993121 TCATTGATAGAGAGGCGATTAAAAATC 58.007 33.333 0.00 0.00 0.00 2.17
2494 2600 8.997323 CATTGATAGAGAGGCGATTAAAAATCT 58.003 33.333 0.00 0.00 0.00 2.40
2500 2606 8.794335 AGAGAGGCGATTAAAAATCTAAACTT 57.206 30.769 0.00 0.00 0.00 2.66
2501 2607 8.884726 AGAGAGGCGATTAAAAATCTAAACTTC 58.115 33.333 0.00 0.00 0.00 3.01
2502 2608 7.685594 AGAGGCGATTAAAAATCTAAACTTCG 58.314 34.615 0.00 0.00 0.00 3.79
2503 2609 6.782150 AGGCGATTAAAAATCTAAACTTCGG 58.218 36.000 0.00 0.00 0.00 4.30
2504 2610 6.596497 AGGCGATTAAAAATCTAAACTTCGGA 59.404 34.615 0.00 0.00 0.00 4.55
2505 2611 7.120138 AGGCGATTAAAAATCTAAACTTCGGAA 59.880 33.333 0.00 0.00 0.00 4.30
2506 2612 7.428472 GGCGATTAAAAATCTAAACTTCGGAAG 59.572 37.037 15.96 15.96 0.00 3.46
2507 2613 7.961283 GCGATTAAAAATCTAAACTTCGGAAGT 59.039 33.333 17.38 17.38 45.46 3.01
2516 2622 2.100605 ACTTCGGAAGTTCCATGCTC 57.899 50.000 21.76 0.00 39.04 4.26
2517 2623 1.339151 ACTTCGGAAGTTCCATGCTCC 60.339 52.381 21.76 0.00 39.04 4.70
2518 2624 0.690192 TTCGGAAGTTCCATGCTCCA 59.310 50.000 21.76 0.00 35.91 3.86
2519 2625 0.250234 TCGGAAGTTCCATGCTCCAG 59.750 55.000 21.76 2.94 35.91 3.86
2520 2626 0.036010 CGGAAGTTCCATGCTCCAGT 60.036 55.000 21.76 0.00 35.91 4.00
2521 2627 1.457346 GGAAGTTCCATGCTCCAGTG 58.543 55.000 17.44 0.00 36.28 3.66
2522 2628 1.457346 GAAGTTCCATGCTCCAGTGG 58.543 55.000 1.40 1.40 36.82 4.00
2523 2629 1.003580 GAAGTTCCATGCTCCAGTGGA 59.996 52.381 12.40 12.40 42.55 4.02
2524 2630 1.293062 AGTTCCATGCTCCAGTGGAT 58.707 50.000 13.56 0.00 43.61 3.41
2525 2631 1.064906 AGTTCCATGCTCCAGTGGATG 60.065 52.381 13.56 8.36 43.61 3.51
2536 2642 2.026641 CCAGTGGATGGCAAACTATGG 58.973 52.381 1.68 0.00 43.83 2.74
2537 2643 2.357050 CCAGTGGATGGCAAACTATGGA 60.357 50.000 1.68 0.00 43.83 3.41
2538 2644 3.355378 CAGTGGATGGCAAACTATGGAA 58.645 45.455 0.00 0.00 0.00 3.53
2539 2645 3.379372 CAGTGGATGGCAAACTATGGAAG 59.621 47.826 0.00 0.00 0.00 3.46
2540 2646 2.689983 GTGGATGGCAAACTATGGAAGG 59.310 50.000 0.00 0.00 0.00 3.46
2541 2647 2.580322 TGGATGGCAAACTATGGAAGGA 59.420 45.455 0.00 0.00 0.00 3.36
2542 2648 3.011144 TGGATGGCAAACTATGGAAGGAA 59.989 43.478 0.00 0.00 0.00 3.36
2543 2649 3.633986 GGATGGCAAACTATGGAAGGAAG 59.366 47.826 0.00 0.00 0.00 3.46
2544 2650 4.526970 GATGGCAAACTATGGAAGGAAGA 58.473 43.478 0.00 0.00 0.00 2.87
2545 2651 4.380843 TGGCAAACTATGGAAGGAAGAA 57.619 40.909 0.00 0.00 0.00 2.52
2546 2652 4.335416 TGGCAAACTATGGAAGGAAGAAG 58.665 43.478 0.00 0.00 0.00 2.85
2547 2653 4.042809 TGGCAAACTATGGAAGGAAGAAGA 59.957 41.667 0.00 0.00 0.00 2.87
2548 2654 4.396478 GGCAAACTATGGAAGGAAGAAGAC 59.604 45.833 0.00 0.00 0.00 3.01
2549 2655 5.003804 GCAAACTATGGAAGGAAGAAGACA 58.996 41.667 0.00 0.00 0.00 3.41
2550 2656 5.473504 GCAAACTATGGAAGGAAGAAGACAA 59.526 40.000 0.00 0.00 0.00 3.18
2551 2657 6.151817 GCAAACTATGGAAGGAAGAAGACAAT 59.848 38.462 0.00 0.00 0.00 2.71
2552 2658 7.627300 GCAAACTATGGAAGGAAGAAGACAATC 60.627 40.741 0.00 0.00 0.00 2.67
2553 2659 6.627087 ACTATGGAAGGAAGAAGACAATCA 57.373 37.500 0.00 0.00 0.00 2.57
2554 2660 7.020827 ACTATGGAAGGAAGAAGACAATCAA 57.979 36.000 0.00 0.00 0.00 2.57
2555 2661 7.637511 ACTATGGAAGGAAGAAGACAATCAAT 58.362 34.615 0.00 0.00 0.00 2.57
2556 2662 8.772250 ACTATGGAAGGAAGAAGACAATCAATA 58.228 33.333 0.00 0.00 0.00 1.90
2557 2663 9.790344 CTATGGAAGGAAGAAGACAATCAATAT 57.210 33.333 0.00 0.00 0.00 1.28
2558 2664 7.870509 TGGAAGGAAGAAGACAATCAATATG 57.129 36.000 0.00 0.00 0.00 1.78
2559 2665 7.632861 TGGAAGGAAGAAGACAATCAATATGA 58.367 34.615 0.00 0.00 0.00 2.15
2560 2666 8.277197 TGGAAGGAAGAAGACAATCAATATGAT 58.723 33.333 0.00 0.00 39.09 2.45
2563 2669 9.690913 AAGGAAGAAGACAATCAATATGATTCA 57.309 29.630 2.70 0.00 43.03 2.57
2564 2670 9.690913 AGGAAGAAGACAATCAATATGATTCAA 57.309 29.630 2.70 0.00 43.03 2.69
2591 2697 9.488124 TGTAACTTTTTACACATTGTTTCGTAC 57.512 29.630 0.00 0.00 42.23 3.67
2592 2698 9.706846 GTAACTTTTTACACATTGTTTCGTACT 57.293 29.630 0.00 0.00 38.01 2.73
2593 2699 8.831000 AACTTTTTACACATTGTTTCGTACTC 57.169 30.769 0.00 0.00 0.00 2.59
2594 2700 7.412063 ACTTTTTACACATTGTTTCGTACTCC 58.588 34.615 0.00 0.00 0.00 3.85
2595 2701 5.927954 TTTACACATTGTTTCGTACTCCC 57.072 39.130 0.00 0.00 0.00 4.30
2596 2702 3.764237 ACACATTGTTTCGTACTCCCT 57.236 42.857 0.00 0.00 0.00 4.20
2597 2703 4.081322 ACACATTGTTTCGTACTCCCTT 57.919 40.909 0.00 0.00 0.00 3.95
2598 2704 4.062991 ACACATTGTTTCGTACTCCCTTC 58.937 43.478 0.00 0.00 0.00 3.46
2599 2705 4.062293 CACATTGTTTCGTACTCCCTTCA 58.938 43.478 0.00 0.00 0.00 3.02
2600 2706 4.695455 CACATTGTTTCGTACTCCCTTCAT 59.305 41.667 0.00 0.00 0.00 2.57
2601 2707 5.181245 CACATTGTTTCGTACTCCCTTCATT 59.819 40.000 0.00 0.00 0.00 2.57
2602 2708 5.768164 ACATTGTTTCGTACTCCCTTCATTT 59.232 36.000 0.00 0.00 0.00 2.32
2603 2709 5.682943 TTGTTTCGTACTCCCTTCATTTG 57.317 39.130 0.00 0.00 0.00 2.32
2604 2710 4.069304 TGTTTCGTACTCCCTTCATTTGG 58.931 43.478 0.00 0.00 0.00 3.28
2605 2711 4.202377 TGTTTCGTACTCCCTTCATTTGGA 60.202 41.667 0.00 0.00 0.00 3.53
2606 2712 4.627284 TTCGTACTCCCTTCATTTGGAA 57.373 40.909 0.00 0.00 0.00 3.53
2607 2713 4.837093 TCGTACTCCCTTCATTTGGAAT 57.163 40.909 0.00 0.00 34.32 3.01
2608 2714 5.174037 TCGTACTCCCTTCATTTGGAATT 57.826 39.130 0.00 0.00 34.32 2.17
2609 2715 6.302535 TCGTACTCCCTTCATTTGGAATTA 57.697 37.500 0.00 0.00 34.32 1.40
2610 2716 6.110707 TCGTACTCCCTTCATTTGGAATTAC 58.889 40.000 0.00 0.00 34.32 1.89
2611 2717 6.070424 TCGTACTCCCTTCATTTGGAATTACT 60.070 38.462 0.00 0.00 34.32 2.24
2612 2718 7.124599 TCGTACTCCCTTCATTTGGAATTACTA 59.875 37.037 0.00 0.00 34.32 1.82
2613 2719 7.438459 CGTACTCCCTTCATTTGGAATTACTAG 59.562 40.741 0.00 0.00 34.32 2.57
2614 2720 7.272144 ACTCCCTTCATTTGGAATTACTAGT 57.728 36.000 0.00 0.00 34.32 2.57
2615 2721 7.339482 ACTCCCTTCATTTGGAATTACTAGTC 58.661 38.462 0.00 0.00 34.32 2.59
2616 2722 6.346096 TCCCTTCATTTGGAATTACTAGTCG 58.654 40.000 0.00 0.00 34.32 4.18
2617 2723 5.007724 CCCTTCATTTGGAATTACTAGTCGC 59.992 44.000 0.00 0.00 34.32 5.19
2618 2724 5.584649 CCTTCATTTGGAATTACTAGTCGCA 59.415 40.000 0.00 0.00 34.32 5.10
2619 2725 6.093495 CCTTCATTTGGAATTACTAGTCGCAA 59.907 38.462 0.00 0.00 34.32 4.85
2620 2726 6.417191 TCATTTGGAATTACTAGTCGCAAC 57.583 37.500 0.00 0.00 0.00 4.17
2621 2727 5.935206 TCATTTGGAATTACTAGTCGCAACA 59.065 36.000 0.00 0.00 0.00 3.33
2622 2728 6.428465 TCATTTGGAATTACTAGTCGCAACAA 59.572 34.615 0.00 0.00 0.00 2.83
2623 2729 5.600908 TTGGAATTACTAGTCGCAACAAC 57.399 39.130 0.00 0.00 0.00 3.32
2624 2730 3.676172 TGGAATTACTAGTCGCAACAACG 59.324 43.478 0.00 0.00 0.00 4.10
2625 2731 3.922240 GGAATTACTAGTCGCAACAACGA 59.078 43.478 0.00 0.00 40.36 3.85
2626 2732 4.386652 GGAATTACTAGTCGCAACAACGAA 59.613 41.667 0.00 0.00 44.93 3.85
2627 2733 5.063060 GGAATTACTAGTCGCAACAACGAAT 59.937 40.000 0.00 0.00 44.93 3.34
2628 2734 6.254157 GGAATTACTAGTCGCAACAACGAATA 59.746 38.462 0.00 0.00 44.93 1.75
2629 2735 5.997732 TTACTAGTCGCAACAACGAATAC 57.002 39.130 0.00 0.00 44.93 1.89
2630 2736 3.904571 ACTAGTCGCAACAACGAATACA 58.095 40.909 0.00 0.00 44.93 2.29
2631 2737 4.300803 ACTAGTCGCAACAACGAATACAA 58.699 39.130 0.00 0.00 44.93 2.41
2632 2738 4.746115 ACTAGTCGCAACAACGAATACAAA 59.254 37.500 0.00 0.00 44.93 2.83
2633 2739 4.742438 AGTCGCAACAACGAATACAAAT 57.258 36.364 0.00 0.00 44.93 2.32
2634 2740 4.463209 AGTCGCAACAACGAATACAAATG 58.537 39.130 0.00 0.00 44.93 2.32
2635 2741 4.212425 AGTCGCAACAACGAATACAAATGA 59.788 37.500 0.00 0.00 44.93 2.57
2636 2742 4.907010 GTCGCAACAACGAATACAAATGAA 59.093 37.500 0.00 0.00 44.93 2.57
2637 2743 5.567534 GTCGCAACAACGAATACAAATGAAT 59.432 36.000 0.00 0.00 44.93 2.57
2638 2744 5.567154 TCGCAACAACGAATACAAATGAATG 59.433 36.000 0.00 0.00 39.54 2.67
2639 2745 5.341993 CGCAACAACGAATACAAATGAATGT 59.658 36.000 0.00 0.00 34.48 2.71
2640 2746 6.521477 CGCAACAACGAATACAAATGAATGTA 59.479 34.615 0.00 0.00 36.30 2.29
2641 2747 7.218014 CGCAACAACGAATACAAATGAATGTAT 59.782 33.333 0.00 0.00 45.93 2.29
2642 2748 8.523464 GCAACAACGAATACAAATGAATGTATC 58.477 33.333 0.00 0.00 43.83 2.24
2643 2749 9.773328 CAACAACGAATACAAATGAATGTATCT 57.227 29.630 0.00 0.00 43.83 1.98
2648 2754 9.698309 ACGAATACAAATGAATGTATCTAGGAG 57.302 33.333 0.00 0.00 43.83 3.69
2649 2755 9.698309 CGAATACAAATGAATGTATCTAGGAGT 57.302 33.333 0.85 0.00 43.83 3.85
2681 2787 9.303116 ACATATAGATACATTCGTCCTTTCTCT 57.697 33.333 0.00 0.00 0.00 3.10
2682 2788 9.566530 CATATAGATACATTCGTCCTTTCTCTG 57.433 37.037 0.00 0.00 0.00 3.35
2683 2789 5.923733 AGATACATTCGTCCTTTCTCTGT 57.076 39.130 0.00 0.00 0.00 3.41
2684 2790 8.693120 ATAGATACATTCGTCCTTTCTCTGTA 57.307 34.615 0.00 0.00 0.00 2.74
2685 2791 7.589958 AGATACATTCGTCCTTTCTCTGTAT 57.410 36.000 0.00 0.00 32.60 2.29
2686 2792 8.012957 AGATACATTCGTCCTTTCTCTGTATT 57.987 34.615 0.00 0.00 30.69 1.89
2687 2793 8.478877 AGATACATTCGTCCTTTCTCTGTATTT 58.521 33.333 0.00 0.00 30.69 1.40
2688 2794 9.099454 GATACATTCGTCCTTTCTCTGTATTTT 57.901 33.333 0.00 0.00 30.69 1.82
2689 2795 7.365840 ACATTCGTCCTTTCTCTGTATTTTC 57.634 36.000 0.00 0.00 0.00 2.29
2690 2796 7.162082 ACATTCGTCCTTTCTCTGTATTTTCT 58.838 34.615 0.00 0.00 0.00 2.52
2691 2797 8.311836 ACATTCGTCCTTTCTCTGTATTTTCTA 58.688 33.333 0.00 0.00 0.00 2.10
2692 2798 9.319143 CATTCGTCCTTTCTCTGTATTTTCTAT 57.681 33.333 0.00 0.00 0.00 1.98
2742 2848 9.962783 ATAAGATAGAAAAGCATTTGATTCAGC 57.037 29.630 0.00 0.00 39.02 4.26
2743 2849 7.642082 AGATAGAAAAGCATTTGATTCAGCT 57.358 32.000 0.00 0.00 39.02 4.24
2744 2850 7.481642 AGATAGAAAAGCATTTGATTCAGCTG 58.518 34.615 7.63 7.63 39.02 4.24
2745 2851 5.717078 AGAAAAGCATTTGATTCAGCTGA 57.283 34.783 13.74 13.74 39.02 4.26
2746 2852 5.467705 AGAAAAGCATTTGATTCAGCTGAC 58.532 37.500 18.03 6.65 39.02 3.51
2747 2853 5.243283 AGAAAAGCATTTGATTCAGCTGACT 59.757 36.000 18.03 11.94 39.02 3.41
2748 2854 4.436242 AAGCATTTGATTCAGCTGACTG 57.564 40.909 18.03 8.36 45.95 3.51
2749 2855 4.521639 AAAGCATTTGATTCAGCTGACTGA 59.478 37.500 18.03 1.55 44.16 3.41
2750 2856 5.185249 AAAGCATTTGATTCAGCTGACTGAT 59.815 36.000 18.03 7.61 44.80 2.90
2751 2857 6.625300 AAAGCATTTGATTCAGCTGACTGATC 60.625 38.462 18.03 17.20 44.80 2.92
2752 2858 9.445419 AAAGCATTTGATTCAGCTGACTGATCC 62.445 40.741 18.03 4.18 44.80 3.36
2762 2868 4.818642 AGCTGACTGATCCGATCATTATG 58.181 43.478 11.53 3.00 38.85 1.90
2763 2869 4.282957 AGCTGACTGATCCGATCATTATGT 59.717 41.667 11.53 6.16 38.85 2.29
2764 2870 4.993584 GCTGACTGATCCGATCATTATGTT 59.006 41.667 11.53 0.00 38.85 2.71
2765 2871 6.015095 AGCTGACTGATCCGATCATTATGTTA 60.015 38.462 11.53 2.83 38.85 2.41
2766 2872 6.309980 GCTGACTGATCCGATCATTATGTTAG 59.690 42.308 11.53 12.08 38.85 2.34
2767 2873 7.290110 TGACTGATCCGATCATTATGTTAGT 57.710 36.000 11.53 3.74 38.85 2.24
2768 2874 7.371159 TGACTGATCCGATCATTATGTTAGTC 58.629 38.462 11.53 12.26 38.85 2.59
2769 2875 7.014230 TGACTGATCCGATCATTATGTTAGTCA 59.986 37.037 11.53 14.36 38.85 3.41
2770 2876 7.901029 ACTGATCCGATCATTATGTTAGTCAT 58.099 34.615 11.53 0.00 38.85 3.06
2771 2877 7.816513 ACTGATCCGATCATTATGTTAGTCATG 59.183 37.037 11.53 0.00 38.85 3.07
2772 2878 7.670364 TGATCCGATCATTATGTTAGTCATGT 58.330 34.615 7.00 0.00 34.78 3.21
2773 2879 7.599998 TGATCCGATCATTATGTTAGTCATGTG 59.400 37.037 7.00 0.00 34.78 3.21
2774 2880 5.696270 TCCGATCATTATGTTAGTCATGTGC 59.304 40.000 0.00 0.00 37.91 4.57
2775 2881 5.388786 CCGATCATTATGTTAGTCATGTGCG 60.389 44.000 0.00 0.00 37.91 5.34
2776 2882 5.175673 CGATCATTATGTTAGTCATGTGCGT 59.824 40.000 0.00 0.00 37.91 5.24
2777 2883 5.717038 TCATTATGTTAGTCATGTGCGTG 57.283 39.130 0.00 0.00 37.91 5.34
2778 2884 5.415221 TCATTATGTTAGTCATGTGCGTGA 58.585 37.500 0.00 0.00 37.91 4.35
2779 2885 5.290885 TCATTATGTTAGTCATGTGCGTGAC 59.709 40.000 14.71 14.71 46.90 3.67
2785 2891 2.979006 GTCATGTGCGTGACTATTCG 57.021 50.000 15.12 0.00 43.96 3.34
2786 2892 2.259618 GTCATGTGCGTGACTATTCGT 58.740 47.619 15.12 0.00 43.96 3.85
2787 2893 3.431856 GTCATGTGCGTGACTATTCGTA 58.568 45.455 15.12 0.00 43.96 3.43
2788 2894 3.855379 GTCATGTGCGTGACTATTCGTAA 59.145 43.478 15.12 0.00 43.96 3.18
2789 2895 4.503007 GTCATGTGCGTGACTATTCGTAAT 59.497 41.667 15.12 0.00 43.96 1.89
2790 2896 4.502645 TCATGTGCGTGACTATTCGTAATG 59.497 41.667 0.00 0.00 0.00 1.90
2791 2897 3.840468 TGTGCGTGACTATTCGTAATGT 58.160 40.909 0.00 0.00 0.00 2.71
2792 2898 4.984205 TGTGCGTGACTATTCGTAATGTA 58.016 39.130 0.00 0.00 0.00 2.29
2793 2899 5.400703 TGTGCGTGACTATTCGTAATGTAA 58.599 37.500 0.00 0.00 0.00 2.41
2794 2900 6.037726 TGTGCGTGACTATTCGTAATGTAAT 58.962 36.000 0.00 0.00 0.00 1.89
2795 2901 6.532302 TGTGCGTGACTATTCGTAATGTAATT 59.468 34.615 0.00 0.00 41.28 1.40
2796 2902 6.839301 GTGCGTGACTATTCGTAATGTAATTG 59.161 38.462 0.00 0.00 36.99 2.32
2797 2903 6.532302 TGCGTGACTATTCGTAATGTAATTGT 59.468 34.615 0.00 0.00 36.99 2.71
2798 2904 6.839301 GCGTGACTATTCGTAATGTAATTGTG 59.161 38.462 0.00 0.00 36.99 3.33
2799 2905 7.253850 GCGTGACTATTCGTAATGTAATTGTGA 60.254 37.037 0.00 0.00 36.99 3.58
2800 2906 8.588789 CGTGACTATTCGTAATGTAATTGTGAA 58.411 33.333 0.00 0.00 36.99 3.18
2801 2907 9.685005 GTGACTATTCGTAATGTAATTGTGAAC 57.315 33.333 0.00 0.00 36.99 3.18
2802 2908 9.425577 TGACTATTCGTAATGTAATTGTGAACA 57.574 29.630 0.00 0.00 36.99 3.18
2829 2935 8.888579 TTTTTAAACACAGACACCTTTTGAAA 57.111 26.923 0.00 0.00 0.00 2.69
2830 2936 8.888579 TTTTAAACACAGACACCTTTTGAAAA 57.111 26.923 0.00 0.00 0.00 2.29
2831 2937 8.888579 TTTAAACACAGACACCTTTTGAAAAA 57.111 26.923 0.00 0.00 0.00 1.94
2832 2938 9.495572 TTTAAACACAGACACCTTTTGAAAAAT 57.504 25.926 0.00 0.00 0.00 1.82
2835 2941 8.647143 AACACAGACACCTTTTGAAAAATATG 57.353 30.769 0.00 0.00 0.00 1.78
2836 2942 8.006298 ACACAGACACCTTTTGAAAAATATGA 57.994 30.769 0.00 0.00 0.00 2.15
2837 2943 8.474025 ACACAGACACCTTTTGAAAAATATGAA 58.526 29.630 0.00 0.00 0.00 2.57
2838 2944 9.480053 CACAGACACCTTTTGAAAAATATGAAT 57.520 29.630 0.00 0.00 0.00 2.57
2882 2988 5.365021 TTTTTGAATTTTTGAGCAGGGGA 57.635 34.783 0.00 0.00 0.00 4.81
2883 2989 5.365021 TTTTGAATTTTTGAGCAGGGGAA 57.635 34.783 0.00 0.00 0.00 3.97
2884 2990 4.335400 TTGAATTTTTGAGCAGGGGAAC 57.665 40.909 0.00 0.00 0.00 3.62
2885 2991 3.575805 TGAATTTTTGAGCAGGGGAACT 58.424 40.909 0.00 0.00 0.00 3.01
2886 2992 3.966665 TGAATTTTTGAGCAGGGGAACTT 59.033 39.130 0.00 0.00 0.00 2.66
2887 2993 4.408596 TGAATTTTTGAGCAGGGGAACTTT 59.591 37.500 0.00 0.00 0.00 2.66
2888 2994 5.104569 TGAATTTTTGAGCAGGGGAACTTTT 60.105 36.000 0.00 0.00 0.00 2.27
2889 2995 3.817709 TTTTGAGCAGGGGAACTTTTG 57.182 42.857 0.00 0.00 0.00 2.44
2890 2996 2.452600 TTGAGCAGGGGAACTTTTGT 57.547 45.000 0.00 0.00 0.00 2.83
2891 2997 2.452600 TGAGCAGGGGAACTTTTGTT 57.547 45.000 0.00 0.00 46.75 2.83
2892 2998 2.031120 TGAGCAGGGGAACTTTTGTTG 58.969 47.619 0.00 0.00 43.66 3.33
2893 2999 2.306847 GAGCAGGGGAACTTTTGTTGA 58.693 47.619 0.00 0.00 43.66 3.18
2894 3000 2.693074 GAGCAGGGGAACTTTTGTTGAA 59.307 45.455 0.00 0.00 43.66 2.69
2895 3001 3.103742 AGCAGGGGAACTTTTGTTGAAA 58.896 40.909 0.00 0.00 43.66 2.69
2896 3002 3.711190 AGCAGGGGAACTTTTGTTGAAAT 59.289 39.130 0.00 0.00 43.66 2.17
2897 3003 4.164030 AGCAGGGGAACTTTTGTTGAAATT 59.836 37.500 0.00 0.00 43.66 1.82
2898 3004 4.511454 GCAGGGGAACTTTTGTTGAAATTC 59.489 41.667 0.00 0.00 43.66 2.17
2899 3005 5.669477 CAGGGGAACTTTTGTTGAAATTCA 58.331 37.500 0.00 0.00 43.66 2.57
2900 3006 5.754890 CAGGGGAACTTTTGTTGAAATTCAG 59.245 40.000 0.00 0.00 43.66 3.02
2901 3007 5.660864 AGGGGAACTTTTGTTGAAATTCAGA 59.339 36.000 0.00 0.00 43.66 3.27
2902 3008 6.156083 AGGGGAACTTTTGTTGAAATTCAGAA 59.844 34.615 0.00 0.00 43.66 3.02
2903 3009 6.257849 GGGGAACTTTTGTTGAAATTCAGAAC 59.742 38.462 0.00 0.00 43.66 3.01
2904 3010 6.816140 GGGAACTTTTGTTGAAATTCAGAACA 59.184 34.615 0.00 0.00 43.66 3.18
2905 3011 7.333174 GGGAACTTTTGTTGAAATTCAGAACAA 59.667 33.333 8.64 8.64 43.66 2.83
2906 3012 8.882736 GGAACTTTTGTTGAAATTCAGAACAAT 58.117 29.630 12.33 0.68 43.66 2.71
2907 3013 9.693157 GAACTTTTGTTGAAATTCAGAACAATG 57.307 29.630 12.33 10.99 43.66 2.82
2908 3014 8.776376 ACTTTTGTTGAAATTCAGAACAATGT 57.224 26.923 12.33 11.45 38.88 2.71
2909 3015 9.218440 ACTTTTGTTGAAATTCAGAACAATGTT 57.782 25.926 12.33 0.00 38.88 2.71
2920 3026 9.844257 AATTCAGAACAATGTTTAAATTTCCCA 57.156 25.926 0.00 0.00 0.00 4.37
2921 3027 9.844257 ATTCAGAACAATGTTTAAATTTCCCAA 57.156 25.926 0.00 0.00 0.00 4.12
2922 3028 9.672673 TTCAGAACAATGTTTAAATTTCCCAAA 57.327 25.926 0.00 0.00 0.00 3.28
2923 3029 9.103861 TCAGAACAATGTTTAAATTTCCCAAAC 57.896 29.630 0.00 7.73 33.70 2.93
2924 3030 8.887717 CAGAACAATGTTTAAATTTCCCAAACA 58.112 29.630 16.22 16.22 43.91 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.378427 GCCGAGAATAATTGGATATGCCC 59.622 47.826 0.00 0.00 34.97 5.36
1 2 4.265073 AGCCGAGAATAATTGGATATGCC 58.735 43.478 0.00 0.00 37.10 4.40
2 3 6.763135 TGATAGCCGAGAATAATTGGATATGC 59.237 38.462 0.00 0.00 35.81 3.14
3 4 8.722480 TTGATAGCCGAGAATAATTGGATATG 57.278 34.615 0.00 0.00 35.81 1.78
4 5 9.167311 GTTTGATAGCCGAGAATAATTGGATAT 57.833 33.333 0.00 0.00 37.91 1.63
5 6 7.606456 GGTTTGATAGCCGAGAATAATTGGATA 59.394 37.037 0.00 0.00 0.00 2.59
23 24 4.085733 CCTTGGGTTGACATGGTTTGATA 58.914 43.478 0.00 0.00 32.60 2.15
30 31 1.984026 GGCCCTTGGGTTGACATGG 60.984 63.158 7.61 0.00 35.91 3.66
39 40 0.259938 AAGCAATCTAGGCCCTTGGG 59.740 55.000 0.00 0.32 0.00 4.12
44 45 5.072741 TCATTATTCAAGCAATCTAGGCCC 58.927 41.667 0.00 0.00 0.00 5.80
46 47 5.335504 GCCTCATTATTCAAGCAATCTAGGC 60.336 44.000 0.00 0.00 35.13 3.93
59 60 7.380602 GCTAAACATGTTGATGCCTCATTATTC 59.619 37.037 12.82 0.00 32.14 1.75
63 64 4.463539 TGCTAAACATGTTGATGCCTCATT 59.536 37.500 12.82 0.00 32.14 2.57
114 117 7.262048 TGTTAATCACGTGATTAGCATAGACA 58.738 34.615 40.56 34.98 46.19 3.41
148 151 6.570672 TCACGTTGATATGAGGTAGGATAC 57.429 41.667 0.00 0.00 42.04 2.24
222 231 7.264947 CGCCTTTTGGGTCTTTTTATATTGAT 58.735 34.615 0.00 0.00 40.82 2.57
273 283 5.097742 TCCAGATCGTTGGATTGTAATGT 57.902 39.130 0.00 0.00 42.24 2.71
293 303 4.744795 ACACTCATCACTGGAGTAATCC 57.255 45.455 1.18 1.18 43.47 3.01
298 308 3.134623 TGTTGAACACTCATCACTGGAGT 59.865 43.478 0.00 0.00 46.11 3.85
304 314 7.751732 TGCTAAATATGTTGAACACTCATCAC 58.248 34.615 0.00 0.00 34.79 3.06
351 361 7.558161 TTTGTGATTAGCATAGAGGTTGATG 57.442 36.000 0.00 0.00 0.00 3.07
421 433 7.114866 TGATTACACGTTGATATTGGGTAGA 57.885 36.000 0.00 0.00 0.00 2.59
427 439 9.825972 AAGAAAGTTGATTACACGTTGATATTG 57.174 29.630 0.00 0.00 0.00 1.90
477 508 5.041287 TGCACGGTAATATCTCGAAGAAAG 58.959 41.667 0.00 0.00 34.09 2.62
478 509 5.001237 TGCACGGTAATATCTCGAAGAAA 57.999 39.130 0.00 0.00 34.09 2.52
479 510 4.642445 TGCACGGTAATATCTCGAAGAA 57.358 40.909 0.00 0.00 34.09 2.52
480 511 4.848562 ATGCACGGTAATATCTCGAAGA 57.151 40.909 0.00 0.00 0.00 2.87
481 512 5.918576 TGTAATGCACGGTAATATCTCGAAG 59.081 40.000 0.00 0.00 0.00 3.79
482 513 5.688621 GTGTAATGCACGGTAATATCTCGAA 59.311 40.000 0.00 0.00 38.45 3.71
483 514 5.217393 GTGTAATGCACGGTAATATCTCGA 58.783 41.667 0.00 0.00 38.45 4.04
484 515 5.496330 GTGTAATGCACGGTAATATCTCG 57.504 43.478 0.00 0.00 38.45 4.04
563 598 3.641436 ACTGAGATATACCATCGGTGCAA 59.359 43.478 0.00 0.00 36.19 4.08
594 642 9.914131 GATTTCTTAGTTGATTTACCAGCTTTT 57.086 29.630 0.00 0.00 0.00 2.27
626 674 4.473520 CGGGATGCAAGTCCGGCT 62.474 66.667 15.18 0.00 39.26 5.52
665 714 0.817229 GGCTAGCTGTGGAATGCTCC 60.817 60.000 15.72 0.00 42.81 4.70
680 729 2.822561 TCCGCAACAATTTTCATGGCTA 59.177 40.909 0.00 0.00 0.00 3.93
708 757 2.203394 CTGTGCCACTTGGGTGCT 60.203 61.111 0.00 0.00 41.75 4.40
737 800 3.375922 GGTTCTGGTTTTGAGTTCGTTGA 59.624 43.478 0.00 0.00 0.00 3.18
751 814 4.675029 CGGTTCCGCGGTTCTGGT 62.675 66.667 27.15 0.00 0.00 4.00
899 963 1.068885 GTCGATCTATCAGGGTCTGCG 60.069 57.143 0.00 0.00 0.00 5.18
934 998 1.133025 GTGTGCTTGCTGACTTGTGTT 59.867 47.619 0.00 0.00 0.00 3.32
986 1079 0.957395 GGCCATGGCATACAGGATCG 60.957 60.000 36.56 0.00 44.11 3.69
994 1090 4.927782 GCGGTCGGCCATGGCATA 62.928 66.667 36.56 21.74 44.11 3.14
1020 1116 2.033141 AGCAGTGGCAGCAACGAT 59.967 55.556 1.37 0.00 44.61 3.73
1170 1269 0.314302 AGAGGACGTTGACCTTGACG 59.686 55.000 0.00 0.00 44.34 4.35
1915 2014 2.663852 CGTTGTCGGGTCCCACAC 60.664 66.667 9.12 4.28 0.00 3.82
1959 2058 2.424842 ATTTTGCCTGCTCCCACGGA 62.425 55.000 0.00 0.00 0.00 4.69
1996 2095 1.301558 CTCCGGATCTCATGCAGCC 60.302 63.158 3.57 0.00 0.00 4.85
2094 2200 4.350346 CTTCAGAAAACACATTGCAACGA 58.650 39.130 0.00 0.00 0.00 3.85
2169 2275 6.151663 TCATGTGCCAAATTGAATATCCTG 57.848 37.500 0.00 0.00 0.00 3.86
2172 2278 7.095774 GCAGAATCATGTGCCAAATTGAATATC 60.096 37.037 0.00 0.00 39.82 1.63
2175 2281 4.873827 GCAGAATCATGTGCCAAATTGAAT 59.126 37.500 0.00 0.00 39.82 2.57
2176 2282 4.247258 GCAGAATCATGTGCCAAATTGAA 58.753 39.130 0.00 0.00 39.82 2.69
2177 2283 3.673866 CGCAGAATCATGTGCCAAATTGA 60.674 43.478 0.00 0.00 42.60 2.57
2178 2284 2.601314 CGCAGAATCATGTGCCAAATTG 59.399 45.455 0.86 0.00 42.60 2.32
2179 2285 2.231964 ACGCAGAATCATGTGCCAAATT 59.768 40.909 0.86 0.00 42.60 1.82
2180 2286 1.820519 ACGCAGAATCATGTGCCAAAT 59.179 42.857 0.86 0.00 42.60 2.32
2181 2287 1.068402 CACGCAGAATCATGTGCCAAA 60.068 47.619 0.86 0.00 42.60 3.28
2182 2288 0.522626 CACGCAGAATCATGTGCCAA 59.477 50.000 0.86 0.00 42.60 4.52
2183 2289 2.173433 CACGCAGAATCATGTGCCA 58.827 52.632 0.86 0.00 42.60 4.92
2186 2292 3.745332 TTTAGCACGCAGAATCATGTG 57.255 42.857 0.00 0.00 36.74 3.21
2187 2293 4.764679 TTTTTAGCACGCAGAATCATGT 57.235 36.364 0.00 0.00 0.00 3.21
2188 2294 5.334319 TCATTTTTAGCACGCAGAATCATG 58.666 37.500 0.00 0.00 0.00 3.07
2189 2295 5.565592 TCATTTTTAGCACGCAGAATCAT 57.434 34.783 0.00 0.00 0.00 2.45
2190 2296 5.369685 TTCATTTTTAGCACGCAGAATCA 57.630 34.783 0.00 0.00 0.00 2.57
2191 2297 6.875926 AATTCATTTTTAGCACGCAGAATC 57.124 33.333 0.00 0.00 0.00 2.52
2192 2298 7.656707 AAAATTCATTTTTAGCACGCAGAAT 57.343 28.000 0.00 0.00 36.65 2.40
2193 2299 7.149047 CGTAAAATTCATTTTTAGCACGCAGAA 60.149 33.333 2.91 0.00 39.77 3.02
2194 2300 6.304445 CGTAAAATTCATTTTTAGCACGCAGA 59.696 34.615 2.91 0.00 39.77 4.26
2195 2301 6.304445 TCGTAAAATTCATTTTTAGCACGCAG 59.696 34.615 10.92 0.00 39.77 5.18
2196 2302 6.143496 TCGTAAAATTCATTTTTAGCACGCA 58.857 32.000 10.92 2.21 39.77 5.24
2197 2303 6.605496 TCGTAAAATTCATTTTTAGCACGC 57.395 33.333 10.92 0.00 39.77 5.34
2198 2304 8.635124 ACATTCGTAAAATTCATTTTTAGCACG 58.365 29.630 2.91 7.13 39.77 5.34
2199 2305 9.937577 GACATTCGTAAAATTCATTTTTAGCAC 57.062 29.630 2.91 0.00 39.77 4.40
2200 2306 9.684448 TGACATTCGTAAAATTCATTTTTAGCA 57.316 25.926 2.91 0.00 39.77 3.49
2214 2320 9.658475 CACAACTATCTTTTTGACATTCGTAAA 57.342 29.630 0.00 0.00 0.00 2.01
2215 2321 8.832521 ACACAACTATCTTTTTGACATTCGTAA 58.167 29.630 0.00 0.00 0.00 3.18
2216 2322 8.373048 ACACAACTATCTTTTTGACATTCGTA 57.627 30.769 0.00 0.00 0.00 3.43
2217 2323 7.259290 ACACAACTATCTTTTTGACATTCGT 57.741 32.000 0.00 0.00 0.00 3.85
2218 2324 7.855409 TGAACACAACTATCTTTTTGACATTCG 59.145 33.333 0.00 0.00 0.00 3.34
2219 2325 9.683069 ATGAACACAACTATCTTTTTGACATTC 57.317 29.630 0.00 0.00 0.00 2.67
2221 2327 9.467258 CAATGAACACAACTATCTTTTTGACAT 57.533 29.630 0.00 0.00 0.00 3.06
2222 2328 8.465999 ACAATGAACACAACTATCTTTTTGACA 58.534 29.630 0.00 0.00 0.00 3.58
2223 2329 8.856490 ACAATGAACACAACTATCTTTTTGAC 57.144 30.769 0.00 0.00 0.00 3.18
2224 2330 8.681806 TGACAATGAACACAACTATCTTTTTGA 58.318 29.630 0.00 0.00 0.00 2.69
2225 2331 8.745837 GTGACAATGAACACAACTATCTTTTTG 58.254 33.333 9.40 0.00 37.05 2.44
2226 2332 8.465999 TGTGACAATGAACACAACTATCTTTTT 58.534 29.630 13.05 0.00 42.72 1.94
2227 2333 7.915397 GTGTGACAATGAACACAACTATCTTTT 59.085 33.333 15.78 0.00 46.17 2.27
2228 2334 7.417612 GTGTGACAATGAACACAACTATCTTT 58.582 34.615 15.78 0.00 46.17 2.52
2229 2335 6.959361 GTGTGACAATGAACACAACTATCTT 58.041 36.000 15.78 0.00 46.17 2.40
2230 2336 6.545504 GTGTGACAATGAACACAACTATCT 57.454 37.500 15.78 0.00 46.17 1.98
2238 2344 4.503734 CCATTTGTGTGTGACAATGAACAC 59.496 41.667 13.99 13.99 44.23 3.32
2239 2345 4.159321 ACCATTTGTGTGTGACAATGAACA 59.841 37.500 0.00 0.00 44.23 3.18
2240 2346 4.681744 ACCATTTGTGTGTGACAATGAAC 58.318 39.130 0.00 0.00 44.23 3.18
2241 2347 4.998671 ACCATTTGTGTGTGACAATGAA 57.001 36.364 0.00 0.00 44.23 2.57
2242 2348 4.884164 TGTACCATTTGTGTGTGACAATGA 59.116 37.500 0.00 0.00 44.23 2.57
2243 2349 5.180367 TGTACCATTTGTGTGTGACAATG 57.820 39.130 0.00 0.00 44.23 2.82
2244 2350 5.771469 CATGTACCATTTGTGTGTGACAAT 58.229 37.500 0.00 0.00 44.23 2.71
2245 2351 4.498850 GCATGTACCATTTGTGTGTGACAA 60.499 41.667 0.00 0.00 43.11 3.18
2246 2352 3.004210 GCATGTACCATTTGTGTGTGACA 59.996 43.478 0.00 0.00 0.00 3.58
2247 2353 3.004210 TGCATGTACCATTTGTGTGTGAC 59.996 43.478 0.00 0.00 0.00 3.67
2248 2354 3.217626 TGCATGTACCATTTGTGTGTGA 58.782 40.909 0.00 0.00 0.00 3.58
2249 2355 3.639716 TGCATGTACCATTTGTGTGTG 57.360 42.857 0.00 0.00 0.00 3.82
2250 2356 4.662468 TTTGCATGTACCATTTGTGTGT 57.338 36.364 0.00 0.00 0.00 3.72
2251 2357 6.364261 CAAATTTGCATGTACCATTTGTGTG 58.636 36.000 5.01 0.00 32.48 3.82
2252 2358 6.542574 CAAATTTGCATGTACCATTTGTGT 57.457 33.333 5.01 0.00 32.48 3.72
2268 2374 7.416022 TGCTTAAATTTTCACCTGCAAATTTG 58.584 30.769 14.03 14.03 39.73 2.32
2269 2375 7.565323 TGCTTAAATTTTCACCTGCAAATTT 57.435 28.000 11.44 11.44 41.33 1.82
2270 2376 7.748691 ATGCTTAAATTTTCACCTGCAAATT 57.251 28.000 0.00 0.00 33.51 1.82
2271 2377 7.748691 AATGCTTAAATTTTCACCTGCAAAT 57.251 28.000 0.00 0.00 32.88 2.32
2272 2378 7.565323 AAATGCTTAAATTTTCACCTGCAAA 57.435 28.000 0.00 0.00 32.88 3.68
2273 2379 7.281774 TCAAAATGCTTAAATTTTCACCTGCAA 59.718 29.630 0.00 0.00 37.59 4.08
2274 2380 6.765036 TCAAAATGCTTAAATTTTCACCTGCA 59.235 30.769 0.00 0.00 37.59 4.41
2275 2381 7.071414 GTCAAAATGCTTAAATTTTCACCTGC 58.929 34.615 0.00 0.00 37.59 4.85
2276 2382 7.575365 GGTCAAAATGCTTAAATTTTCACCTG 58.425 34.615 9.82 0.00 43.50 4.00
2277 2383 7.728847 GGTCAAAATGCTTAAATTTTCACCT 57.271 32.000 9.82 0.00 43.50 4.00
2278 2384 7.226523 ACAGGTCAAAATGCTTAAATTTTCACC 59.773 33.333 9.30 9.30 45.78 4.02
2279 2385 8.063630 CACAGGTCAAAATGCTTAAATTTTCAC 58.936 33.333 0.00 0.00 37.59 3.18
2280 2386 7.254727 GCACAGGTCAAAATGCTTAAATTTTCA 60.255 33.333 0.00 0.00 37.59 2.69
2281 2387 7.071414 GCACAGGTCAAAATGCTTAAATTTTC 58.929 34.615 0.00 0.00 37.59 2.29
2282 2388 6.541641 TGCACAGGTCAAAATGCTTAAATTTT 59.458 30.769 0.00 0.00 39.71 1.82
2283 2389 6.018016 GTGCACAGGTCAAAATGCTTAAATTT 60.018 34.615 13.17 0.00 38.90 1.82
2284 2390 5.466393 GTGCACAGGTCAAAATGCTTAAATT 59.534 36.000 13.17 0.00 38.90 1.82
2285 2391 4.990426 GTGCACAGGTCAAAATGCTTAAAT 59.010 37.500 13.17 0.00 38.90 1.40
2286 2392 4.142071 TGTGCACAGGTCAAAATGCTTAAA 60.142 37.500 17.42 0.00 38.90 1.52
2287 2393 3.382865 TGTGCACAGGTCAAAATGCTTAA 59.617 39.130 17.42 0.00 38.90 1.85
2288 2394 2.954989 TGTGCACAGGTCAAAATGCTTA 59.045 40.909 17.42 0.00 38.90 3.09
2289 2395 1.755959 TGTGCACAGGTCAAAATGCTT 59.244 42.857 17.42 0.00 38.90 3.91
2290 2396 1.401761 TGTGCACAGGTCAAAATGCT 58.598 45.000 17.42 0.00 38.90 3.79
2291 2397 2.222007 TTGTGCACAGGTCAAAATGC 57.778 45.000 20.59 0.00 38.59 3.56
2312 2418 5.694458 GGTAACATTTGGCATTCGACTTTTT 59.306 36.000 0.00 0.00 0.00 1.94
2313 2419 5.010617 AGGTAACATTTGGCATTCGACTTTT 59.989 36.000 0.00 0.00 41.41 2.27
2314 2420 4.522789 AGGTAACATTTGGCATTCGACTTT 59.477 37.500 0.00 0.00 41.41 2.66
2315 2421 4.079253 AGGTAACATTTGGCATTCGACTT 58.921 39.130 0.00 0.00 41.41 3.01
2316 2422 3.686016 AGGTAACATTTGGCATTCGACT 58.314 40.909 0.00 0.00 41.41 4.18
2317 2423 4.083003 TGAAGGTAACATTTGGCATTCGAC 60.083 41.667 0.00 0.00 41.41 4.20
2318 2424 4.075682 TGAAGGTAACATTTGGCATTCGA 58.924 39.130 0.00 0.00 41.41 3.71
2319 2425 4.433186 TGAAGGTAACATTTGGCATTCG 57.567 40.909 0.00 0.00 41.41 3.34
2320 2426 7.671495 AATTTGAAGGTAACATTTGGCATTC 57.329 32.000 0.00 0.00 41.41 2.67
2321 2427 8.462589 AAAATTTGAAGGTAACATTTGGCATT 57.537 26.923 0.00 0.00 41.41 3.56
2322 2428 8.998377 GTAAAATTTGAAGGTAACATTTGGCAT 58.002 29.630 0.00 0.00 41.41 4.40
2323 2429 7.987458 TGTAAAATTTGAAGGTAACATTTGGCA 59.013 29.630 0.00 0.00 41.41 4.92
2324 2430 8.279800 GTGTAAAATTTGAAGGTAACATTTGGC 58.720 33.333 0.00 0.00 41.41 4.52
2325 2431 9.541143 AGTGTAAAATTTGAAGGTAACATTTGG 57.459 29.630 0.00 0.00 41.41 3.28
2364 2470 1.891919 GCAGTGCTTCACCGGTGAA 60.892 57.895 39.81 39.81 46.27 3.18
2365 2471 1.468506 TAGCAGTGCTTCACCGGTGA 61.469 55.000 33.23 33.23 40.44 4.02
2366 2472 0.391661 ATAGCAGTGCTTCACCGGTG 60.392 55.000 29.26 29.26 40.44 4.94
2367 2473 0.108138 GATAGCAGTGCTTCACCGGT 60.108 55.000 25.23 0.00 40.44 5.28
2368 2474 0.811616 GGATAGCAGTGCTTCACCGG 60.812 60.000 25.23 0.00 40.44 5.28
2369 2475 0.811616 GGGATAGCAGTGCTTCACCG 60.812 60.000 25.23 0.00 40.44 4.94
2370 2476 0.253044 TGGGATAGCAGTGCTTCACC 59.747 55.000 25.23 21.45 40.44 4.02
2371 2477 2.338577 ATGGGATAGCAGTGCTTCAC 57.661 50.000 25.23 20.41 40.44 3.18
2372 2478 4.323028 GCTATATGGGATAGCAGTGCTTCA 60.323 45.833 25.23 16.38 44.64 3.02
2373 2479 4.187694 GCTATATGGGATAGCAGTGCTTC 58.812 47.826 25.23 18.88 44.64 3.86
2374 2480 4.213564 GCTATATGGGATAGCAGTGCTT 57.786 45.455 25.23 11.25 44.64 3.91
2375 2481 3.902881 GCTATATGGGATAGCAGTGCT 57.097 47.619 23.44 23.44 44.64 4.40
2381 2487 8.970859 ACAATTTCTATGCTATATGGGATAGC 57.029 34.615 18.93 9.19 45.28 2.97
2384 2490 9.458727 CTTGACAATTTCTATGCTATATGGGAT 57.541 33.333 0.00 0.00 0.00 3.85
2385 2491 7.391554 GCTTGACAATTTCTATGCTATATGGGA 59.608 37.037 0.00 0.00 0.00 4.37
2386 2492 7.175467 TGCTTGACAATTTCTATGCTATATGGG 59.825 37.037 0.00 0.00 0.00 4.00
2387 2493 8.102800 TGCTTGACAATTTCTATGCTATATGG 57.897 34.615 0.00 0.00 0.00 2.74
2388 2494 8.781196 ACTGCTTGACAATTTCTATGCTATATG 58.219 33.333 0.00 0.00 0.00 1.78
2389 2495 8.915057 ACTGCTTGACAATTTCTATGCTATAT 57.085 30.769 0.00 0.00 0.00 0.86
2391 2497 8.915057 ATACTGCTTGACAATTTCTATGCTAT 57.085 30.769 0.00 0.00 0.00 2.97
2392 2498 8.737168 AATACTGCTTGACAATTTCTATGCTA 57.263 30.769 0.00 0.00 0.00 3.49
2393 2499 7.636150 AATACTGCTTGACAATTTCTATGCT 57.364 32.000 0.00 0.00 0.00 3.79
2394 2500 9.956720 ATTAATACTGCTTGACAATTTCTATGC 57.043 29.630 0.00 0.00 0.00 3.14
2398 2504 9.236006 AGTCATTAATACTGCTTGACAATTTCT 57.764 29.630 6.04 0.00 39.27 2.52
2399 2505 9.846248 AAGTCATTAATACTGCTTGACAATTTC 57.154 29.630 6.04 0.00 39.27 2.17
2401 2507 9.846248 GAAAGTCATTAATACTGCTTGACAATT 57.154 29.630 6.04 1.65 39.27 2.32
2402 2508 8.462016 GGAAAGTCATTAATACTGCTTGACAAT 58.538 33.333 6.04 0.00 39.27 2.71
2403 2509 7.446931 TGGAAAGTCATTAATACTGCTTGACAA 59.553 33.333 6.04 0.00 39.27 3.18
2404 2510 6.939730 TGGAAAGTCATTAATACTGCTTGACA 59.060 34.615 6.04 1.92 39.27 3.58
2405 2511 7.377766 TGGAAAGTCATTAATACTGCTTGAC 57.622 36.000 0.00 0.00 37.54 3.18
2406 2512 9.109393 GTATGGAAAGTCATTAATACTGCTTGA 57.891 33.333 0.00 0.00 0.00 3.02
2407 2513 8.892723 TGTATGGAAAGTCATTAATACTGCTTG 58.107 33.333 0.00 0.00 0.00 4.01
2408 2514 9.632638 ATGTATGGAAAGTCATTAATACTGCTT 57.367 29.630 0.00 0.00 0.00 3.91
2409 2515 9.060347 CATGTATGGAAAGTCATTAATACTGCT 57.940 33.333 0.00 0.00 0.00 4.24
2410 2516 8.840321 ACATGTATGGAAAGTCATTAATACTGC 58.160 33.333 0.00 0.00 0.00 4.40
2419 2525 9.787532 CGAAAATAAACATGTATGGAAAGTCAT 57.212 29.630 0.00 0.00 0.00 3.06
2420 2526 8.240682 CCGAAAATAAACATGTATGGAAAGTCA 58.759 33.333 0.00 0.00 0.00 3.41
2421 2527 7.700656 CCCGAAAATAAACATGTATGGAAAGTC 59.299 37.037 0.00 0.00 0.00 3.01
2422 2528 7.363443 CCCCGAAAATAAACATGTATGGAAAGT 60.363 37.037 0.00 0.00 0.00 2.66
2423 2529 6.978080 CCCCGAAAATAAACATGTATGGAAAG 59.022 38.462 0.00 0.00 0.00 2.62
2424 2530 6.127310 CCCCCGAAAATAAACATGTATGGAAA 60.127 38.462 0.00 0.00 0.00 3.13
2425 2531 5.361285 CCCCCGAAAATAAACATGTATGGAA 59.639 40.000 0.00 0.00 0.00 3.53
2426 2532 4.890581 CCCCCGAAAATAAACATGTATGGA 59.109 41.667 0.00 0.00 0.00 3.41
2427 2533 4.647399 ACCCCCGAAAATAAACATGTATGG 59.353 41.667 0.00 0.00 0.00 2.74
2428 2534 5.587289 CACCCCCGAAAATAAACATGTATG 58.413 41.667 0.00 0.00 0.00 2.39
2429 2535 4.098807 GCACCCCCGAAAATAAACATGTAT 59.901 41.667 0.00 0.00 0.00 2.29
2430 2536 3.444388 GCACCCCCGAAAATAAACATGTA 59.556 43.478 0.00 0.00 0.00 2.29
2431 2537 2.232696 GCACCCCCGAAAATAAACATGT 59.767 45.455 0.00 0.00 0.00 3.21
2432 2538 2.495669 AGCACCCCCGAAAATAAACATG 59.504 45.455 0.00 0.00 0.00 3.21
2433 2539 2.815158 AGCACCCCCGAAAATAAACAT 58.185 42.857 0.00 0.00 0.00 2.71
2434 2540 2.296073 AGCACCCCCGAAAATAAACA 57.704 45.000 0.00 0.00 0.00 2.83
2435 2541 2.823747 AGAAGCACCCCCGAAAATAAAC 59.176 45.455 0.00 0.00 0.00 2.01
2436 2542 2.823154 CAGAAGCACCCCCGAAAATAAA 59.177 45.455 0.00 0.00 0.00 1.40
2437 2543 2.040545 TCAGAAGCACCCCCGAAAATAA 59.959 45.455 0.00 0.00 0.00 1.40
2438 2544 1.631388 TCAGAAGCACCCCCGAAAATA 59.369 47.619 0.00 0.00 0.00 1.40
2439 2545 0.404040 TCAGAAGCACCCCCGAAAAT 59.596 50.000 0.00 0.00 0.00 1.82
2440 2546 0.183971 TTCAGAAGCACCCCCGAAAA 59.816 50.000 0.00 0.00 0.00 2.29
2441 2547 0.536460 GTTCAGAAGCACCCCCGAAA 60.536 55.000 0.00 0.00 0.00 3.46
2442 2548 1.072505 GTTCAGAAGCACCCCCGAA 59.927 57.895 0.00 0.00 0.00 4.30
2443 2549 2.144078 TGTTCAGAAGCACCCCCGA 61.144 57.895 0.00 0.00 0.00 5.14
2444 2550 1.966451 GTGTTCAGAAGCACCCCCG 60.966 63.158 5.14 0.00 0.00 5.73
2445 2551 1.150536 TGTGTTCAGAAGCACCCCC 59.849 57.895 11.20 0.00 34.94 5.40
2446 2552 0.179018 AGTGTGTTCAGAAGCACCCC 60.179 55.000 12.01 5.12 34.94 4.95
2447 2553 0.947244 CAGTGTGTTCAGAAGCACCC 59.053 55.000 12.01 3.36 34.94 4.61
2448 2554 1.599542 GACAGTGTGTTCAGAAGCACC 59.400 52.381 0.00 5.70 34.94 5.01
2449 2555 2.279741 TGACAGTGTGTTCAGAAGCAC 58.720 47.619 0.00 8.91 36.26 4.40
2450 2556 2.689553 TGACAGTGTGTTCAGAAGCA 57.310 45.000 0.00 0.00 0.00 3.91
2451 2557 3.561310 TCAATGACAGTGTGTTCAGAAGC 59.439 43.478 0.00 0.00 0.00 3.86
2452 2558 5.936686 ATCAATGACAGTGTGTTCAGAAG 57.063 39.130 0.00 0.00 0.00 2.85
2453 2559 6.758254 TCTATCAATGACAGTGTGTTCAGAA 58.242 36.000 0.00 0.00 0.00 3.02
2454 2560 6.209391 TCTCTATCAATGACAGTGTGTTCAGA 59.791 38.462 0.00 0.00 0.00 3.27
2455 2561 6.393171 TCTCTATCAATGACAGTGTGTTCAG 58.607 40.000 0.00 0.00 0.00 3.02
2456 2562 6.345096 TCTCTATCAATGACAGTGTGTTCA 57.655 37.500 0.00 0.00 0.00 3.18
2457 2563 5.809562 CCTCTCTATCAATGACAGTGTGTTC 59.190 44.000 0.00 0.00 0.00 3.18
2458 2564 5.728471 CCTCTCTATCAATGACAGTGTGTT 58.272 41.667 0.00 0.00 0.00 3.32
2459 2565 4.382470 GCCTCTCTATCAATGACAGTGTGT 60.382 45.833 0.00 0.00 0.00 3.72
2460 2566 4.118410 GCCTCTCTATCAATGACAGTGTG 58.882 47.826 0.00 0.00 0.00 3.82
2461 2567 3.181482 CGCCTCTCTATCAATGACAGTGT 60.181 47.826 0.00 0.00 0.00 3.55
2462 2568 3.067320 TCGCCTCTCTATCAATGACAGTG 59.933 47.826 0.00 0.00 0.00 3.66
2463 2569 3.291584 TCGCCTCTCTATCAATGACAGT 58.708 45.455 0.00 0.00 0.00 3.55
2464 2570 3.998099 TCGCCTCTCTATCAATGACAG 57.002 47.619 0.00 0.00 0.00 3.51
2465 2571 4.944619 AATCGCCTCTCTATCAATGACA 57.055 40.909 0.00 0.00 0.00 3.58
2466 2572 7.715265 TTTTAATCGCCTCTCTATCAATGAC 57.285 36.000 0.00 0.00 0.00 3.06
2467 2573 8.908786 ATTTTTAATCGCCTCTCTATCAATGA 57.091 30.769 0.00 0.00 0.00 2.57
2468 2574 8.997323 AGATTTTTAATCGCCTCTCTATCAATG 58.003 33.333 0.00 0.00 0.00 2.82
2474 2580 9.886132 AAGTTTAGATTTTTAATCGCCTCTCTA 57.114 29.630 0.00 0.00 0.00 2.43
2475 2581 8.794335 AAGTTTAGATTTTTAATCGCCTCTCT 57.206 30.769 0.00 0.00 0.00 3.10
2476 2582 7.846592 CGAAGTTTAGATTTTTAATCGCCTCTC 59.153 37.037 0.00 0.00 0.00 3.20
2477 2583 7.201617 CCGAAGTTTAGATTTTTAATCGCCTCT 60.202 37.037 0.00 0.00 0.00 3.69
2478 2584 6.905609 CCGAAGTTTAGATTTTTAATCGCCTC 59.094 38.462 0.00 0.00 0.00 4.70
2479 2585 6.596497 TCCGAAGTTTAGATTTTTAATCGCCT 59.404 34.615 0.00 0.00 0.00 5.52
2480 2586 6.778108 TCCGAAGTTTAGATTTTTAATCGCC 58.222 36.000 0.00 0.00 0.00 5.54
2481 2587 7.961283 ACTTCCGAAGTTTAGATTTTTAATCGC 59.039 33.333 8.03 0.00 39.04 4.58
2497 2603 1.339151 GGAGCATGGAACTTCCGAAGT 60.339 52.381 8.03 8.03 45.46 3.01
2498 2604 1.339055 TGGAGCATGGAACTTCCGAAG 60.339 52.381 6.59 6.59 40.17 3.79
2499 2605 0.690192 TGGAGCATGGAACTTCCGAA 59.310 50.000 3.28 0.00 40.17 4.30
2500 2606 0.250234 CTGGAGCATGGAACTTCCGA 59.750 55.000 3.28 0.00 40.17 4.55
2501 2607 0.036010 ACTGGAGCATGGAACTTCCG 60.036 55.000 3.28 0.00 40.17 4.30
2502 2608 1.457346 CACTGGAGCATGGAACTTCC 58.543 55.000 0.20 0.20 36.96 3.46
2503 2609 1.003580 TCCACTGGAGCATGGAACTTC 59.996 52.381 0.00 0.00 42.14 3.01
2504 2610 1.067295 TCCACTGGAGCATGGAACTT 58.933 50.000 0.00 0.00 42.14 2.66
2505 2611 2.777536 TCCACTGGAGCATGGAACT 58.222 52.632 0.00 0.00 42.14 3.01
2517 2623 3.003394 TCCATAGTTTGCCATCCACTG 57.997 47.619 0.00 0.00 0.00 3.66
2518 2624 3.624777 CTTCCATAGTTTGCCATCCACT 58.375 45.455 0.00 0.00 0.00 4.00
2519 2625 2.689983 CCTTCCATAGTTTGCCATCCAC 59.310 50.000 0.00 0.00 0.00 4.02
2520 2626 2.580322 TCCTTCCATAGTTTGCCATCCA 59.420 45.455 0.00 0.00 0.00 3.41
2521 2627 3.297134 TCCTTCCATAGTTTGCCATCC 57.703 47.619 0.00 0.00 0.00 3.51
2522 2628 4.526970 TCTTCCTTCCATAGTTTGCCATC 58.473 43.478 0.00 0.00 0.00 3.51
2523 2629 4.591321 TCTTCCTTCCATAGTTTGCCAT 57.409 40.909 0.00 0.00 0.00 4.40
2524 2630 4.042809 TCTTCTTCCTTCCATAGTTTGCCA 59.957 41.667 0.00 0.00 0.00 4.92
2525 2631 4.396478 GTCTTCTTCCTTCCATAGTTTGCC 59.604 45.833 0.00 0.00 0.00 4.52
2526 2632 5.003804 TGTCTTCTTCCTTCCATAGTTTGC 58.996 41.667 0.00 0.00 0.00 3.68
2527 2633 7.391554 TGATTGTCTTCTTCCTTCCATAGTTTG 59.608 37.037 0.00 0.00 0.00 2.93
2528 2634 7.461749 TGATTGTCTTCTTCCTTCCATAGTTT 58.538 34.615 0.00 0.00 0.00 2.66
2529 2635 7.020827 TGATTGTCTTCTTCCTTCCATAGTT 57.979 36.000 0.00 0.00 0.00 2.24
2530 2636 6.627087 TGATTGTCTTCTTCCTTCCATAGT 57.373 37.500 0.00 0.00 0.00 2.12
2531 2637 9.790344 ATATTGATTGTCTTCTTCCTTCCATAG 57.210 33.333 0.00 0.00 0.00 2.23
2532 2638 9.565090 CATATTGATTGTCTTCTTCCTTCCATA 57.435 33.333 0.00 0.00 0.00 2.74
2533 2639 8.277197 TCATATTGATTGTCTTCTTCCTTCCAT 58.723 33.333 0.00 0.00 0.00 3.41
2534 2640 7.632861 TCATATTGATTGTCTTCTTCCTTCCA 58.367 34.615 0.00 0.00 0.00 3.53
2535 2641 8.688747 ATCATATTGATTGTCTTCTTCCTTCC 57.311 34.615 0.00 0.00 32.13 3.46
2537 2643 9.690913 TGAATCATATTGATTGTCTTCTTCCTT 57.309 29.630 7.43 0.00 46.20 3.36
2538 2644 9.690913 TTGAATCATATTGATTGTCTTCTTCCT 57.309 29.630 7.43 0.00 46.20 3.36
2565 2671 9.488124 GTACGAAACAATGTGTAAAAAGTTACA 57.512 29.630 0.00 0.00 45.84 2.41
2566 2672 9.706846 AGTACGAAACAATGTGTAAAAAGTTAC 57.293 29.630 0.00 0.00 40.15 2.50
2567 2673 9.919348 GAGTACGAAACAATGTGTAAAAAGTTA 57.081 29.630 0.00 0.00 0.00 2.24
2568 2674 7.911727 GGAGTACGAAACAATGTGTAAAAAGTT 59.088 33.333 0.00 0.00 0.00 2.66
2569 2675 7.412063 GGAGTACGAAACAATGTGTAAAAAGT 58.588 34.615 0.00 0.00 0.00 2.66
2570 2676 6.854381 GGGAGTACGAAACAATGTGTAAAAAG 59.146 38.462 0.00 0.00 0.00 2.27
2571 2677 6.543100 AGGGAGTACGAAACAATGTGTAAAAA 59.457 34.615 0.00 0.00 0.00 1.94
2572 2678 6.056884 AGGGAGTACGAAACAATGTGTAAAA 58.943 36.000 0.00 0.00 0.00 1.52
2573 2679 5.613329 AGGGAGTACGAAACAATGTGTAAA 58.387 37.500 0.00 0.00 0.00 2.01
2574 2680 5.217978 AGGGAGTACGAAACAATGTGTAA 57.782 39.130 0.00 0.00 0.00 2.41
2575 2681 4.877378 AGGGAGTACGAAACAATGTGTA 57.123 40.909 0.00 0.00 0.00 2.90
2576 2682 3.764237 AGGGAGTACGAAACAATGTGT 57.236 42.857 0.00 0.00 0.00 3.72
2577 2683 4.062293 TGAAGGGAGTACGAAACAATGTG 58.938 43.478 0.00 0.00 0.00 3.21
2578 2684 4.345859 TGAAGGGAGTACGAAACAATGT 57.654 40.909 0.00 0.00 0.00 2.71
2579 2685 5.880054 AATGAAGGGAGTACGAAACAATG 57.120 39.130 0.00 0.00 0.00 2.82
2580 2686 5.183140 CCAAATGAAGGGAGTACGAAACAAT 59.817 40.000 0.00 0.00 0.00 2.71
2581 2687 4.517453 CCAAATGAAGGGAGTACGAAACAA 59.483 41.667 0.00 0.00 0.00 2.83
2582 2688 4.069304 CCAAATGAAGGGAGTACGAAACA 58.931 43.478 0.00 0.00 0.00 2.83
2583 2689 4.320870 TCCAAATGAAGGGAGTACGAAAC 58.679 43.478 0.00 0.00 0.00 2.78
2584 2690 4.627284 TCCAAATGAAGGGAGTACGAAA 57.373 40.909 0.00 0.00 0.00 3.46
2585 2691 4.627284 TTCCAAATGAAGGGAGTACGAA 57.373 40.909 0.00 0.00 34.02 3.85
2586 2692 4.837093 ATTCCAAATGAAGGGAGTACGA 57.163 40.909 0.00 0.00 36.14 3.43
2587 2693 6.113411 AGTAATTCCAAATGAAGGGAGTACG 58.887 40.000 0.00 0.00 36.14 3.67
2588 2694 8.265764 ACTAGTAATTCCAAATGAAGGGAGTAC 58.734 37.037 0.00 0.00 36.14 2.73
2589 2695 8.388656 ACTAGTAATTCCAAATGAAGGGAGTA 57.611 34.615 0.00 0.00 36.14 2.59
2590 2696 7.272144 ACTAGTAATTCCAAATGAAGGGAGT 57.728 36.000 0.00 0.00 36.14 3.85
2591 2697 6.480320 CGACTAGTAATTCCAAATGAAGGGAG 59.520 42.308 0.00 0.00 36.14 4.30
2592 2698 6.346096 CGACTAGTAATTCCAAATGAAGGGA 58.654 40.000 0.00 0.00 36.14 4.20
2593 2699 5.007724 GCGACTAGTAATTCCAAATGAAGGG 59.992 44.000 0.00 0.00 36.14 3.95
2594 2700 5.584649 TGCGACTAGTAATTCCAAATGAAGG 59.415 40.000 0.00 0.00 36.14 3.46
2595 2701 6.662414 TGCGACTAGTAATTCCAAATGAAG 57.338 37.500 0.00 0.00 36.14 3.02
2596 2702 6.428465 TGTTGCGACTAGTAATTCCAAATGAA 59.572 34.615 5.50 0.00 37.38 2.57
2597 2703 5.935206 TGTTGCGACTAGTAATTCCAAATGA 59.065 36.000 5.50 0.00 0.00 2.57
2598 2704 6.176975 TGTTGCGACTAGTAATTCCAAATG 57.823 37.500 5.50 0.00 0.00 2.32
2599 2705 6.608610 GTTGTTGCGACTAGTAATTCCAAAT 58.391 36.000 5.50 0.00 0.00 2.32
2600 2706 5.333492 CGTTGTTGCGACTAGTAATTCCAAA 60.333 40.000 5.50 0.00 0.00 3.28
2601 2707 4.150980 CGTTGTTGCGACTAGTAATTCCAA 59.849 41.667 5.50 0.00 0.00 3.53
2602 2708 3.676172 CGTTGTTGCGACTAGTAATTCCA 59.324 43.478 5.50 0.00 0.00 3.53
2603 2709 3.922240 TCGTTGTTGCGACTAGTAATTCC 59.078 43.478 5.50 0.00 35.83 3.01
2604 2710 5.505165 TTCGTTGTTGCGACTAGTAATTC 57.495 39.130 5.50 0.00 40.85 2.17
2605 2711 6.587226 TGTATTCGTTGTTGCGACTAGTAATT 59.413 34.615 5.50 0.00 40.85 1.40
2606 2712 6.094719 TGTATTCGTTGTTGCGACTAGTAAT 58.905 36.000 5.50 3.56 40.85 1.89
2607 2713 5.459768 TGTATTCGTTGTTGCGACTAGTAA 58.540 37.500 5.50 0.00 40.85 2.24
2608 2714 5.045668 TGTATTCGTTGTTGCGACTAGTA 57.954 39.130 5.50 0.00 40.85 1.82
2609 2715 3.904571 TGTATTCGTTGTTGCGACTAGT 58.095 40.909 5.50 0.00 40.85 2.57
2610 2716 4.896562 TTGTATTCGTTGTTGCGACTAG 57.103 40.909 5.50 0.00 40.85 2.57
2611 2717 5.405873 TCATTTGTATTCGTTGTTGCGACTA 59.594 36.000 5.50 0.00 40.85 2.59
2612 2718 4.212425 TCATTTGTATTCGTTGTTGCGACT 59.788 37.500 5.50 0.00 40.85 4.18
2613 2719 4.459606 TCATTTGTATTCGTTGTTGCGAC 58.540 39.130 0.00 0.00 40.85 5.19
2614 2720 4.733972 TCATTTGTATTCGTTGTTGCGA 57.266 36.364 0.00 0.00 39.28 5.10
2615 2721 5.341993 ACATTCATTTGTATTCGTTGTTGCG 59.658 36.000 0.00 0.00 0.00 4.85
2616 2722 6.689178 ACATTCATTTGTATTCGTTGTTGC 57.311 33.333 0.00 0.00 0.00 4.17
2617 2723 9.773328 AGATACATTCATTTGTATTCGTTGTTG 57.227 29.630 0.00 0.00 41.67 3.33
2622 2728 9.698309 CTCCTAGATACATTCATTTGTATTCGT 57.302 33.333 0.00 0.00 41.67 3.85
2623 2729 9.698309 ACTCCTAGATACATTCATTTGTATTCG 57.302 33.333 0.00 0.00 41.67 3.34
2655 2761 9.303116 AGAGAAAGGACGAATGTATCTATATGT 57.697 33.333 0.00 0.00 0.00 2.29
2656 2762 9.566530 CAGAGAAAGGACGAATGTATCTATATG 57.433 37.037 0.00 0.00 0.00 1.78
2657 2763 9.303116 ACAGAGAAAGGACGAATGTATCTATAT 57.697 33.333 0.00 0.00 0.00 0.86
2658 2764 8.693120 ACAGAGAAAGGACGAATGTATCTATA 57.307 34.615 0.00 0.00 0.00 1.31
2659 2765 7.589958 ACAGAGAAAGGACGAATGTATCTAT 57.410 36.000 0.00 0.00 0.00 1.98
2660 2766 8.693120 ATACAGAGAAAGGACGAATGTATCTA 57.307 34.615 0.00 0.00 28.86 1.98
2661 2767 5.923733 ACAGAGAAAGGACGAATGTATCT 57.076 39.130 0.00 0.00 0.00 1.98
2662 2768 8.649973 AAATACAGAGAAAGGACGAATGTATC 57.350 34.615 0.00 0.00 32.71 2.24
2663 2769 9.099454 GAAAATACAGAGAAAGGACGAATGTAT 57.901 33.333 0.00 0.00 34.70 2.29
2664 2770 8.311836 AGAAAATACAGAGAAAGGACGAATGTA 58.688 33.333 0.00 0.00 0.00 2.29
2665 2771 7.162082 AGAAAATACAGAGAAAGGACGAATGT 58.838 34.615 0.00 0.00 0.00 2.71
2666 2772 7.602517 AGAAAATACAGAGAAAGGACGAATG 57.397 36.000 0.00 0.00 0.00 2.67
2716 2822 9.962783 GCTGAATCAAATGCTTTTCTATCTTAT 57.037 29.630 0.00 0.00 0.00 1.73
2717 2823 9.182214 AGCTGAATCAAATGCTTTTCTATCTTA 57.818 29.630 0.00 0.00 30.96 2.10
2718 2824 7.974501 CAGCTGAATCAAATGCTTTTCTATCTT 59.025 33.333 8.42 0.00 33.03 2.40
2719 2825 7.338703 TCAGCTGAATCAAATGCTTTTCTATCT 59.661 33.333 15.67 0.00 33.03 1.98
2720 2826 7.431668 GTCAGCTGAATCAAATGCTTTTCTATC 59.568 37.037 20.19 0.00 33.03 2.08
2721 2827 7.122353 AGTCAGCTGAATCAAATGCTTTTCTAT 59.878 33.333 20.19 0.00 33.03 1.98
2722 2828 6.432162 AGTCAGCTGAATCAAATGCTTTTCTA 59.568 34.615 20.19 0.00 33.03 2.10
2723 2829 5.243283 AGTCAGCTGAATCAAATGCTTTTCT 59.757 36.000 20.19 2.74 33.03 2.52
2724 2830 5.345202 CAGTCAGCTGAATCAAATGCTTTTC 59.655 40.000 20.19 0.06 45.28 2.29
2725 2831 5.227908 CAGTCAGCTGAATCAAATGCTTTT 58.772 37.500 20.19 0.00 45.28 2.27
2726 2832 4.806330 CAGTCAGCTGAATCAAATGCTTT 58.194 39.130 20.19 0.00 45.28 3.51
2727 2833 4.436242 CAGTCAGCTGAATCAAATGCTT 57.564 40.909 20.19 0.00 45.28 3.91
2739 2845 2.816204 ATGATCGGATCAGTCAGCTG 57.184 50.000 23.59 7.63 43.53 4.24
2740 2846 4.282957 ACATAATGATCGGATCAGTCAGCT 59.717 41.667 22.57 4.09 43.53 4.24
2741 2847 4.564041 ACATAATGATCGGATCAGTCAGC 58.436 43.478 22.57 0.00 43.53 4.26
2742 2848 7.374272 ACTAACATAATGATCGGATCAGTCAG 58.626 38.462 22.57 17.89 43.53 3.51
2743 2849 7.014230 TGACTAACATAATGATCGGATCAGTCA 59.986 37.037 22.57 21.95 43.53 3.41
2744 2850 7.371159 TGACTAACATAATGATCGGATCAGTC 58.629 38.462 22.57 20.05 43.53 3.51
2745 2851 7.290110 TGACTAACATAATGATCGGATCAGT 57.710 36.000 23.59 23.05 43.53 3.41
2746 2852 7.816513 ACATGACTAACATAATGATCGGATCAG 59.183 37.037 23.59 13.58 38.98 2.90
2747 2853 7.599998 CACATGACTAACATAATGATCGGATCA 59.400 37.037 21.92 21.92 39.52 2.92
2748 2854 7.412346 GCACATGACTAACATAATGATCGGATC 60.412 40.741 11.07 11.07 37.46 3.36
2749 2855 6.369890 GCACATGACTAACATAATGATCGGAT 59.630 38.462 0.00 0.00 37.46 4.18
2750 2856 5.696270 GCACATGACTAACATAATGATCGGA 59.304 40.000 0.00 0.00 37.46 4.55
2751 2857 5.388786 CGCACATGACTAACATAATGATCGG 60.389 44.000 0.00 0.00 37.46 4.18
2752 2858 5.175673 ACGCACATGACTAACATAATGATCG 59.824 40.000 0.00 0.00 37.46 3.69
2753 2859 6.200854 TCACGCACATGACTAACATAATGATC 59.799 38.462 0.00 0.00 37.46 2.92
2754 2860 6.018751 GTCACGCACATGACTAACATAATGAT 60.019 38.462 0.00 0.00 44.71 2.45
2755 2861 5.290885 GTCACGCACATGACTAACATAATGA 59.709 40.000 0.00 0.00 44.71 2.57
2756 2862 5.492854 GTCACGCACATGACTAACATAATG 58.507 41.667 0.00 0.00 44.71 1.90
2757 2863 5.718649 GTCACGCACATGACTAACATAAT 57.281 39.130 0.00 0.00 44.71 1.28
2767 2873 2.647529 ACGAATAGTCACGCACATGA 57.352 45.000 0.00 0.00 0.00 3.07
2768 2874 4.267690 ACATTACGAATAGTCACGCACATG 59.732 41.667 0.00 0.00 0.00 3.21
2769 2875 4.430007 ACATTACGAATAGTCACGCACAT 58.570 39.130 0.00 0.00 0.00 3.21
2770 2876 3.840468 ACATTACGAATAGTCACGCACA 58.160 40.909 0.00 0.00 0.00 4.57
2771 2877 5.937165 TTACATTACGAATAGTCACGCAC 57.063 39.130 0.00 0.00 0.00 5.34
2772 2878 6.532302 ACAATTACATTACGAATAGTCACGCA 59.468 34.615 0.00 0.00 0.00 5.24
2773 2879 6.839301 CACAATTACATTACGAATAGTCACGC 59.161 38.462 0.00 0.00 0.00 5.34
2774 2880 8.110970 TCACAATTACATTACGAATAGTCACG 57.889 34.615 0.00 0.00 0.00 4.35
2775 2881 9.685005 GTTCACAATTACATTACGAATAGTCAC 57.315 33.333 0.00 0.00 0.00 3.67
2776 2882 9.425577 TGTTCACAATTACATTACGAATAGTCA 57.574 29.630 0.00 0.00 0.00 3.41
2804 2910 8.888579 TTTCAAAAGGTGTCTGTGTTTAAAAA 57.111 26.923 0.00 0.00 0.00 1.94
2805 2911 8.888579 TTTTCAAAAGGTGTCTGTGTTTAAAA 57.111 26.923 0.00 0.00 0.00 1.52
2806 2912 8.888579 TTTTTCAAAAGGTGTCTGTGTTTAAA 57.111 26.923 0.00 0.00 0.00 1.52
2809 2915 9.097257 CATATTTTTCAAAAGGTGTCTGTGTTT 57.903 29.630 0.00 0.00 0.00 2.83
2810 2916 8.474025 TCATATTTTTCAAAAGGTGTCTGTGTT 58.526 29.630 0.00 0.00 0.00 3.32
2811 2917 8.006298 TCATATTTTTCAAAAGGTGTCTGTGT 57.994 30.769 0.00 0.00 0.00 3.72
2812 2918 8.870160 TTCATATTTTTCAAAAGGTGTCTGTG 57.130 30.769 0.00 0.00 0.00 3.66
2860 2966 5.365021 TCCCCTGCTCAAAAATTCAAAAA 57.635 34.783 0.00 0.00 0.00 1.94
2861 2967 5.104569 AGTTCCCCTGCTCAAAAATTCAAAA 60.105 36.000 0.00 0.00 0.00 2.44
2862 2968 4.408596 AGTTCCCCTGCTCAAAAATTCAAA 59.591 37.500 0.00 0.00 0.00 2.69
2863 2969 3.966665 AGTTCCCCTGCTCAAAAATTCAA 59.033 39.130 0.00 0.00 0.00 2.69
2864 2970 3.575805 AGTTCCCCTGCTCAAAAATTCA 58.424 40.909 0.00 0.00 0.00 2.57
2865 2971 4.607293 AAGTTCCCCTGCTCAAAAATTC 57.393 40.909 0.00 0.00 0.00 2.17
2866 2972 5.125356 CAAAAGTTCCCCTGCTCAAAAATT 58.875 37.500 0.00 0.00 0.00 1.82
2867 2973 4.164030 ACAAAAGTTCCCCTGCTCAAAAAT 59.836 37.500 0.00 0.00 0.00 1.82
2868 2974 3.517500 ACAAAAGTTCCCCTGCTCAAAAA 59.482 39.130 0.00 0.00 0.00 1.94
2869 2975 3.103742 ACAAAAGTTCCCCTGCTCAAAA 58.896 40.909 0.00 0.00 0.00 2.44
2870 2976 2.745968 ACAAAAGTTCCCCTGCTCAAA 58.254 42.857 0.00 0.00 0.00 2.69
2871 2977 2.430332 CAACAAAAGTTCCCCTGCTCAA 59.570 45.455 0.00 0.00 0.00 3.02
2872 2978 2.031120 CAACAAAAGTTCCCCTGCTCA 58.969 47.619 0.00 0.00 0.00 4.26
2873 2979 2.306847 TCAACAAAAGTTCCCCTGCTC 58.693 47.619 0.00 0.00 0.00 4.26
2874 2980 2.452600 TCAACAAAAGTTCCCCTGCT 57.547 45.000 0.00 0.00 0.00 4.24
2875 2981 3.535280 TTTCAACAAAAGTTCCCCTGC 57.465 42.857 0.00 0.00 0.00 4.85
2876 2982 5.669477 TGAATTTCAACAAAAGTTCCCCTG 58.331 37.500 0.00 0.00 0.00 4.45
2877 2983 5.660864 TCTGAATTTCAACAAAAGTTCCCCT 59.339 36.000 0.01 0.00 0.00 4.79
2878 2984 5.912892 TCTGAATTTCAACAAAAGTTCCCC 58.087 37.500 0.01 0.00 0.00 4.81
2879 2985 6.816140 TGTTCTGAATTTCAACAAAAGTTCCC 59.184 34.615 0.01 0.00 0.00 3.97
2880 2986 7.826260 TGTTCTGAATTTCAACAAAAGTTCC 57.174 32.000 0.01 0.00 0.00 3.62
2881 2987 9.693157 CATTGTTCTGAATTTCAACAAAAGTTC 57.307 29.630 16.51 0.00 41.93 3.01
2882 2988 9.218440 ACATTGTTCTGAATTTCAACAAAAGTT 57.782 25.926 16.51 2.80 41.93 2.66
2883 2989 8.776376 ACATTGTTCTGAATTTCAACAAAAGT 57.224 26.923 16.51 14.99 41.93 2.66
2894 3000 9.844257 TGGGAAATTTAAACATTGTTCTGAATT 57.156 25.926 1.83 7.08 0.00 2.17
2895 3001 9.844257 TTGGGAAATTTAAACATTGTTCTGAAT 57.156 25.926 1.83 1.58 0.00 2.57
2896 3002 9.672673 TTTGGGAAATTTAAACATTGTTCTGAA 57.327 25.926 1.83 0.00 0.00 3.02
2897 3003 9.103861 GTTTGGGAAATTTAAACATTGTTCTGA 57.896 29.630 1.83 0.00 35.11 3.27
2898 3004 8.887717 TGTTTGGGAAATTTAAACATTGTTCTG 58.112 29.630 11.82 0.00 38.83 3.02
2899 3005 9.625747 ATGTTTGGGAAATTTAAACATTGTTCT 57.374 25.926 18.46 3.91 46.87 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.