Multiple sequence alignment - TraesCS7B01G083500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G083500 chr7B 100.000 1880 0 0 932 2811 94263778 94265657 0.000000e+00 3472.0
1 TraesCS7B01G083500 chr7B 100.000 568 0 0 1 568 94262847 94263414 0.000000e+00 1050.0
2 TraesCS7B01G083500 chr7B 80.214 1213 174 40 980 2151 93441315 93440128 0.000000e+00 850.0
3 TraesCS7B01G083500 chr7B 84.078 515 72 7 1306 1812 157808796 157809308 3.250000e-134 488.0
4 TraesCS7B01G083500 chr7B 85.714 434 62 0 1378 1811 93865004 93865437 2.550000e-125 459.0
5 TraesCS7B01G083500 chr7B 91.538 260 14 8 153 407 63829679 63829935 4.460000e-93 351.0
6 TraesCS7B01G083500 chr7B 82.121 330 43 13 1879 2201 94142686 94142366 4.620000e-68 268.0
7 TraesCS7B01G083500 chr7B 81.707 328 48 10 1879 2201 94185458 94185138 2.150000e-66 263.0
8 TraesCS7B01G083500 chr7B 85.446 213 19 7 2097 2299 94117343 94117133 7.890000e-51 211.0
9 TraesCS7B01G083500 chr7B 84.772 197 19 6 2097 2283 94142532 94142337 1.330000e-43 187.0
10 TraesCS7B01G083500 chr7B 77.483 151 27 6 2311 2458 93865610 93865756 1.790000e-12 84.2
11 TraesCS7B01G083500 chr7B 92.308 39 2 1 480 518 94263297 94263334 1.000000e-03 54.7
12 TraesCS7B01G083500 chr7B 92.308 39 2 1 451 488 94263326 94263364 1.000000e-03 54.7
13 TraesCS7B01G083500 chr7D 88.216 1536 94 37 932 2429 133193644 133195130 0.000000e+00 1753.0
14 TraesCS7B01G083500 chr7D 79.892 1109 142 51 1444 2503 131822901 131821825 0.000000e+00 737.0
15 TraesCS7B01G083500 chr7D 86.144 599 49 11 2065 2638 133194707 133195296 1.430000e-172 616.0
16 TraesCS7B01G083500 chr7D 82.534 584 83 13 1245 1812 194129671 194130251 1.940000e-136 496.0
17 TraesCS7B01G083500 chr7D 83.269 520 71 6 1306 1811 132741485 132742002 5.480000e-127 464.0
18 TraesCS7B01G083500 chr7D 81.575 597 74 24 1245 1811 132748317 132748907 7.090000e-126 460.0
19 TraesCS7B01G083500 chr7D 83.951 486 61 10 1346 1815 132764158 132763674 1.540000e-122 449.0
20 TraesCS7B01G083500 chr7D 83.884 484 59 12 1346 1812 132136059 132136540 7.150000e-121 444.0
21 TraesCS7B01G083500 chr7D 82.405 341 46 9 1867 2201 132763677 132763345 4.580000e-73 285.0
22 TraesCS7B01G083500 chr7D 81.765 340 39 11 1864 2200 132741996 132742315 2.150000e-66 263.0
23 TraesCS7B01G083500 chr7D 84.047 257 28 7 2065 2312 132763541 132763289 4.680000e-58 235.0
24 TraesCS7B01G083500 chr7D 96.970 66 2 0 413 478 133193474 133193539 8.230000e-21 111.0
25 TraesCS7B01G083500 chr7D 81.651 109 13 3 2699 2806 194130934 194131036 1.790000e-12 84.2
26 TraesCS7B01G083500 chr7D 80.531 113 14 7 2400 2506 131822208 131822098 2.320000e-11 80.5
27 TraesCS7B01G083500 chr7D 95.652 46 2 0 1 46 351560980 351561025 1.080000e-09 75.0
28 TraesCS7B01G083500 chr7D 94.444 36 0 2 2406 2439 131822238 131822203 1.000000e-03 54.7
29 TraesCS7B01G083500 chr7A 90.375 1174 85 23 1581 2740 131776444 131777603 0.000000e+00 1517.0
30 TraesCS7B01G083500 chr7A 85.117 598 76 9 1444 2029 130614926 130614330 1.440000e-167 599.0
31 TraesCS7B01G083500 chr7A 86.897 435 54 3 1378 1812 203697313 203697744 4.210000e-133 484.0
32 TraesCS7B01G083500 chr7A 84.444 315 41 6 1868 2177 210253121 210253432 1.270000e-78 303.0
33 TraesCS7B01G083500 chr7A 85.776 232 21 7 2087 2308 131108414 131108185 4.680000e-58 235.0
34 TraesCS7B01G083500 chr7A 85.590 229 21 7 2087 2305 130893928 130894154 2.180000e-56 230.0
35 TraesCS7B01G083500 chr7A 84.034 238 23 10 2087 2312 131186504 131186270 6.100000e-52 215.0
36 TraesCS7B01G083500 chr7A 82.677 254 30 6 2065 2309 203697874 203698122 2.190000e-51 213.0
37 TraesCS7B01G083500 chr7A 84.615 195 19 7 2087 2271 130783466 130783659 1.720000e-42 183.0
38 TraesCS7B01G083500 chr7A 82.873 181 22 8 2332 2506 130614099 130613922 1.350000e-33 154.0
39 TraesCS7B01G083500 chr7A 81.188 202 26 8 2206 2404 130614091 130613899 4.850000e-33 152.0
40 TraesCS7B01G083500 chr7A 77.419 186 22 14 2247 2428 131776866 131777035 2.980000e-15 93.5
41 TraesCS7B01G083500 chr5B 92.620 271 14 6 149 416 661248787 661248520 4.390000e-103 385.0
42 TraesCS7B01G083500 chr5B 97.436 39 1 0 1 39 605317356 605317394 1.810000e-07 67.6
43 TraesCS7B01G083500 chr1B 93.798 258 10 5 153 407 389308941 389309195 1.580000e-102 383.0
44 TraesCS7B01G083500 chr1B 90.037 271 20 7 153 420 538625638 538625372 7.450000e-91 344.0
45 TraesCS7B01G083500 chr4B 91.353 266 14 7 153 415 86761453 86761712 3.440000e-94 355.0
46 TraesCS7B01G083500 chr3B 90.706 269 19 6 151 416 420902286 420902551 1.240000e-93 353.0
47 TraesCS7B01G083500 chr3B 97.436 39 1 0 1 39 486798965 486799003 1.810000e-07 67.6
48 TraesCS7B01G083500 chr3B 97.436 39 1 0 1 39 720233987 720233949 1.810000e-07 67.6
49 TraesCS7B01G083500 chr1D 91.045 268 15 8 156 421 76971206 76970946 1.240000e-93 353.0
50 TraesCS7B01G083500 chr5D 90.637 267 18 6 153 416 534789311 534789049 5.760000e-92 348.0
51 TraesCS7B01G083500 chr5D 95.238 42 2 0 1 42 81454125 81454084 1.810000e-07 67.6
52 TraesCS7B01G083500 chr5A 90.074 272 17 9 154 420 34842167 34841901 7.450000e-91 344.0
53 TraesCS7B01G083500 chr2B 86.222 225 20 8 2093 2309 726685063 726684842 1.680000e-57 233.0
54 TraesCS7B01G083500 chr2B 94.872 39 2 0 1 39 781062825 781062863 8.410000e-06 62.1
55 TraesCS7B01G083500 chr6B 97.436 39 1 0 1 39 500651285 500651323 1.810000e-07 67.6
56 TraesCS7B01G083500 chr6A 97.436 39 1 0 1 39 592277186 592277224 1.810000e-07 67.6
57 TraesCS7B01G083500 chr2D 88.235 51 6 0 1 51 54105328 54105278 8.410000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G083500 chr7B 94262847 94265657 2810 False 1157.850000 3472 96.154000 1 2811 4 chr7B.!!$F4 2810
1 TraesCS7B01G083500 chr7B 93440128 93441315 1187 True 850.000000 850 80.214000 980 2151 1 chr7B.!!$R1 1171
2 TraesCS7B01G083500 chr7B 157808796 157809308 512 False 488.000000 488 84.078000 1306 1812 1 chr7B.!!$F2 506
3 TraesCS7B01G083500 chr7B 93865004 93865756 752 False 271.600000 459 81.598500 1378 2458 2 chr7B.!!$F3 1080
4 TraesCS7B01G083500 chr7D 133193474 133195296 1822 False 826.666667 1753 90.443333 413 2638 3 chr7D.!!$F5 2225
5 TraesCS7B01G083500 chr7D 132748317 132748907 590 False 460.000000 460 81.575000 1245 1811 1 chr7D.!!$F2 566
6 TraesCS7B01G083500 chr7D 132741485 132742315 830 False 363.500000 464 82.517000 1306 2200 2 chr7D.!!$F4 894
7 TraesCS7B01G083500 chr7D 132763289 132764158 869 True 323.000000 449 83.467667 1346 2312 3 chr7D.!!$R2 966
8 TraesCS7B01G083500 chr7D 131821825 131822901 1076 True 290.733333 737 84.955667 1444 2506 3 chr7D.!!$R1 1062
9 TraesCS7B01G083500 chr7D 194129671 194131036 1365 False 290.100000 496 82.092500 1245 2806 2 chr7D.!!$F6 1561
10 TraesCS7B01G083500 chr7A 131776444 131777603 1159 False 805.250000 1517 83.897000 1581 2740 2 chr7A.!!$F4 1159
11 TraesCS7B01G083500 chr7A 203697313 203698122 809 False 348.500000 484 84.787000 1378 2309 2 chr7A.!!$F5 931
12 TraesCS7B01G083500 chr7A 130613899 130614926 1027 True 301.666667 599 83.059333 1444 2506 3 chr7A.!!$R3 1062

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
458 459 0.037232 CTGTGGTCTCCCGGTCTTTC 60.037 60.0 0.0 0.0 0.0 2.62 F
460 461 0.037232 GTGGTCTCCCGGTCTTTCTG 60.037 60.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1267 1288 0.107643 GGCATACCCTGAGAGAAGCC 59.892 60.0 0.00 0.0 0.00 4.35 R
2361 3318 0.108804 ATCCGTTCATCGCGTCAAGT 60.109 50.0 5.77 0.0 38.35 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.465273 AGCTTTTATCTACAACTTCAAGGTTT 57.535 30.769 0.00 0.00 0.00 3.27
27 28 9.569122 AGCTTTTATCTACAACTTCAAGGTTTA 57.431 29.630 0.00 0.00 0.00 2.01
41 42 8.857098 ACTTCAAGGTTTATTTTAGACTTTCCC 58.143 33.333 0.00 0.00 0.00 3.97
42 43 7.770366 TCAAGGTTTATTTTAGACTTTCCCC 57.230 36.000 0.00 0.00 0.00 4.81
43 44 7.532199 TCAAGGTTTATTTTAGACTTTCCCCT 58.468 34.615 0.00 0.00 0.00 4.79
44 45 8.008332 TCAAGGTTTATTTTAGACTTTCCCCTT 58.992 33.333 0.00 0.00 0.00 3.95
45 46 8.304596 CAAGGTTTATTTTAGACTTTCCCCTTC 58.695 37.037 0.00 0.00 0.00 3.46
46 47 7.532199 AGGTTTATTTTAGACTTTCCCCTTCA 58.468 34.615 0.00 0.00 0.00 3.02
47 48 7.450634 AGGTTTATTTTAGACTTTCCCCTTCAC 59.549 37.037 0.00 0.00 0.00 3.18
48 49 7.231925 GGTTTATTTTAGACTTTCCCCTTCACA 59.768 37.037 0.00 0.00 0.00 3.58
49 50 8.635328 GTTTATTTTAGACTTTCCCCTTCACAA 58.365 33.333 0.00 0.00 0.00 3.33
50 51 8.770010 TTATTTTAGACTTTCCCCTTCACAAA 57.230 30.769 0.00 0.00 0.00 2.83
51 52 6.459670 TTTTAGACTTTCCCCTTCACAAAC 57.540 37.500 0.00 0.00 0.00 2.93
52 53 3.662759 AGACTTTCCCCTTCACAAACA 57.337 42.857 0.00 0.00 0.00 2.83
53 54 3.555966 AGACTTTCCCCTTCACAAACAG 58.444 45.455 0.00 0.00 0.00 3.16
54 55 3.202151 AGACTTTCCCCTTCACAAACAGA 59.798 43.478 0.00 0.00 0.00 3.41
55 56 4.141158 AGACTTTCCCCTTCACAAACAGAT 60.141 41.667 0.00 0.00 0.00 2.90
56 57 3.891366 ACTTTCCCCTTCACAAACAGATG 59.109 43.478 0.00 0.00 0.00 2.90
57 58 1.909700 TCCCCTTCACAAACAGATGC 58.090 50.000 0.00 0.00 0.00 3.91
58 59 0.890683 CCCCTTCACAAACAGATGCC 59.109 55.000 0.00 0.00 0.00 4.40
59 60 0.890683 CCCTTCACAAACAGATGCCC 59.109 55.000 0.00 0.00 0.00 5.36
60 61 1.619654 CCTTCACAAACAGATGCCCA 58.380 50.000 0.00 0.00 0.00 5.36
61 62 1.270550 CCTTCACAAACAGATGCCCAC 59.729 52.381 0.00 0.00 0.00 4.61
62 63 1.270550 CTTCACAAACAGATGCCCACC 59.729 52.381 0.00 0.00 0.00 4.61
63 64 0.184692 TCACAAACAGATGCCCACCA 59.815 50.000 0.00 0.00 0.00 4.17
64 65 1.203038 TCACAAACAGATGCCCACCAT 60.203 47.619 0.00 0.00 36.70 3.55
70 71 4.963878 GATGCCCACCATCTTCGT 57.036 55.556 0.00 0.00 45.58 3.85
71 72 2.695314 GATGCCCACCATCTTCGTC 58.305 57.895 0.00 0.00 45.58 4.20
72 73 0.815615 GATGCCCACCATCTTCGTCC 60.816 60.000 0.00 0.00 45.58 4.79
73 74 1.561769 ATGCCCACCATCTTCGTCCA 61.562 55.000 0.00 0.00 0.00 4.02
74 75 1.450312 GCCCACCATCTTCGTCCAG 60.450 63.158 0.00 0.00 0.00 3.86
75 76 1.983224 CCCACCATCTTCGTCCAGT 59.017 57.895 0.00 0.00 0.00 4.00
76 77 0.324943 CCCACCATCTTCGTCCAGTT 59.675 55.000 0.00 0.00 0.00 3.16
77 78 1.442769 CCACCATCTTCGTCCAGTTG 58.557 55.000 0.00 0.00 0.00 3.16
78 79 1.442769 CACCATCTTCGTCCAGTTGG 58.557 55.000 0.00 0.00 38.95 3.77
79 80 1.056660 ACCATCTTCGTCCAGTTGGT 58.943 50.000 8.20 8.20 40.62 3.67
80 81 1.420138 ACCATCTTCGTCCAGTTGGTT 59.580 47.619 8.20 0.00 42.08 3.67
81 82 2.635915 ACCATCTTCGTCCAGTTGGTTA 59.364 45.455 8.20 0.00 42.08 2.85
82 83 3.000727 CCATCTTCGTCCAGTTGGTTAC 58.999 50.000 0.00 0.00 36.34 2.50
83 84 3.556213 CCATCTTCGTCCAGTTGGTTACA 60.556 47.826 0.00 0.00 36.34 2.41
84 85 3.102052 TCTTCGTCCAGTTGGTTACAC 57.898 47.619 0.00 0.00 36.34 2.90
85 86 2.431419 TCTTCGTCCAGTTGGTTACACA 59.569 45.455 0.00 0.00 36.34 3.72
86 87 2.519377 TCGTCCAGTTGGTTACACAG 57.481 50.000 0.00 0.00 36.34 3.66
87 88 2.033372 TCGTCCAGTTGGTTACACAGA 58.967 47.619 0.00 0.00 36.34 3.41
88 89 2.035449 TCGTCCAGTTGGTTACACAGAG 59.965 50.000 0.00 0.00 36.34 3.35
89 90 2.767505 GTCCAGTTGGTTACACAGAGG 58.232 52.381 0.00 0.00 36.34 3.69
90 91 2.367567 GTCCAGTTGGTTACACAGAGGA 59.632 50.000 0.00 0.00 36.34 3.71
91 92 2.367567 TCCAGTTGGTTACACAGAGGAC 59.632 50.000 0.00 0.00 36.34 3.85
92 93 2.104111 CCAGTTGGTTACACAGAGGACA 59.896 50.000 0.00 0.00 0.00 4.02
93 94 3.244561 CCAGTTGGTTACACAGAGGACAT 60.245 47.826 0.00 0.00 0.00 3.06
94 95 3.997021 CAGTTGGTTACACAGAGGACATC 59.003 47.826 0.00 0.00 0.00 3.06
95 96 2.993899 GTTGGTTACACAGAGGACATCG 59.006 50.000 0.00 0.00 0.00 3.84
96 97 2.521126 TGGTTACACAGAGGACATCGA 58.479 47.619 0.00 0.00 0.00 3.59
97 98 2.492088 TGGTTACACAGAGGACATCGAG 59.508 50.000 0.00 0.00 0.00 4.04
98 99 2.492484 GGTTACACAGAGGACATCGAGT 59.508 50.000 0.00 0.00 0.00 4.18
99 100 3.693085 GGTTACACAGAGGACATCGAGTA 59.307 47.826 0.00 0.00 0.00 2.59
100 101 4.338682 GGTTACACAGAGGACATCGAGTAT 59.661 45.833 0.00 0.00 0.00 2.12
101 102 5.505985 GGTTACACAGAGGACATCGAGTATC 60.506 48.000 0.00 0.00 0.00 2.24
102 103 3.621558 ACACAGAGGACATCGAGTATCA 58.378 45.455 0.00 0.00 33.17 2.15
103 104 4.017126 ACACAGAGGACATCGAGTATCAA 58.983 43.478 0.00 0.00 33.17 2.57
104 105 4.462834 ACACAGAGGACATCGAGTATCAAA 59.537 41.667 0.00 0.00 33.17 2.69
105 106 5.047306 ACACAGAGGACATCGAGTATCAAAA 60.047 40.000 0.00 0.00 33.17 2.44
106 107 5.289675 CACAGAGGACATCGAGTATCAAAAC 59.710 44.000 0.00 0.00 33.17 2.43
107 108 4.806247 CAGAGGACATCGAGTATCAAAACC 59.194 45.833 0.00 0.00 33.17 3.27
108 109 4.712337 AGAGGACATCGAGTATCAAAACCT 59.288 41.667 0.00 0.00 33.17 3.50
109 110 5.012328 AGGACATCGAGTATCAAAACCTC 57.988 43.478 0.00 0.00 33.17 3.85
110 111 4.712337 AGGACATCGAGTATCAAAACCTCT 59.288 41.667 0.00 0.00 33.17 3.69
111 112 5.044558 GGACATCGAGTATCAAAACCTCTC 58.955 45.833 0.00 0.00 33.17 3.20
112 113 5.163499 GGACATCGAGTATCAAAACCTCTCT 60.163 44.000 0.00 0.00 33.17 3.10
113 114 5.897050 ACATCGAGTATCAAAACCTCTCTC 58.103 41.667 0.00 0.00 33.17 3.20
114 115 5.419155 ACATCGAGTATCAAAACCTCTCTCA 59.581 40.000 0.00 0.00 33.17 3.27
115 116 5.977489 TCGAGTATCAAAACCTCTCTCAA 57.023 39.130 0.00 0.00 33.17 3.02
116 117 5.710984 TCGAGTATCAAAACCTCTCTCAAC 58.289 41.667 0.00 0.00 33.17 3.18
117 118 4.559251 CGAGTATCAAAACCTCTCTCAACG 59.441 45.833 0.00 0.00 33.17 4.10
118 119 4.822026 AGTATCAAAACCTCTCTCAACGG 58.178 43.478 0.00 0.00 0.00 4.44
119 120 4.527038 AGTATCAAAACCTCTCTCAACGGA 59.473 41.667 0.00 0.00 0.00 4.69
120 121 4.559862 ATCAAAACCTCTCTCAACGGAT 57.440 40.909 0.00 0.00 0.00 4.18
121 122 3.926616 TCAAAACCTCTCTCAACGGATC 58.073 45.455 0.00 0.00 0.00 3.36
122 123 3.323691 TCAAAACCTCTCTCAACGGATCA 59.676 43.478 0.00 0.00 0.00 2.92
123 124 4.065088 CAAAACCTCTCTCAACGGATCAA 58.935 43.478 0.00 0.00 0.00 2.57
124 125 4.351874 AAACCTCTCTCAACGGATCAAA 57.648 40.909 0.00 0.00 0.00 2.69
125 126 4.351874 AACCTCTCTCAACGGATCAAAA 57.648 40.909 0.00 0.00 0.00 2.44
126 127 3.665190 ACCTCTCTCAACGGATCAAAAC 58.335 45.455 0.00 0.00 0.00 2.43
127 128 2.668457 CCTCTCTCAACGGATCAAAACG 59.332 50.000 0.00 0.00 0.00 3.60
128 129 3.318017 CTCTCTCAACGGATCAAAACGT 58.682 45.455 0.00 0.00 46.48 3.99
129 130 4.482386 CTCTCTCAACGGATCAAAACGTA 58.518 43.478 0.00 0.00 43.31 3.57
130 131 5.068234 TCTCTCAACGGATCAAAACGTAT 57.932 39.130 0.00 0.00 43.31 3.06
131 132 5.100259 TCTCTCAACGGATCAAAACGTATC 58.900 41.667 0.00 0.00 43.31 2.24
132 133 4.811908 TCTCAACGGATCAAAACGTATCA 58.188 39.130 0.00 0.00 43.31 2.15
133 134 4.624024 TCTCAACGGATCAAAACGTATCAC 59.376 41.667 0.00 0.00 43.31 3.06
134 135 3.680937 TCAACGGATCAAAACGTATCACC 59.319 43.478 0.00 0.00 43.31 4.02
135 136 3.322211 ACGGATCAAAACGTATCACCA 57.678 42.857 0.00 0.00 42.15 4.17
136 137 2.997986 ACGGATCAAAACGTATCACCAC 59.002 45.455 0.00 0.00 42.15 4.16
137 138 2.350498 CGGATCAAAACGTATCACCACC 59.650 50.000 0.00 0.00 0.00 4.61
138 139 2.681344 GGATCAAAACGTATCACCACCC 59.319 50.000 0.00 0.00 0.00 4.61
139 140 3.606687 GATCAAAACGTATCACCACCCT 58.393 45.455 0.00 0.00 0.00 4.34
140 141 3.495434 TCAAAACGTATCACCACCCTT 57.505 42.857 0.00 0.00 0.00 3.95
141 142 3.142951 TCAAAACGTATCACCACCCTTG 58.857 45.455 0.00 0.00 0.00 3.61
142 143 1.530323 AAACGTATCACCACCCTTGC 58.470 50.000 0.00 0.00 0.00 4.01
143 144 0.672401 AACGTATCACCACCCTTGCG 60.672 55.000 0.00 0.00 0.00 4.85
144 145 2.461110 CGTATCACCACCCTTGCGC 61.461 63.158 0.00 0.00 0.00 6.09
145 146 2.112815 GTATCACCACCCTTGCGCC 61.113 63.158 4.18 0.00 0.00 6.53
146 147 3.338275 TATCACCACCCTTGCGCCC 62.338 63.158 4.18 0.00 0.00 6.13
154 155 4.077184 CCTTGCGCCCTGGTCGTA 62.077 66.667 4.18 0.00 0.00 3.43
155 156 2.813908 CTTGCGCCCTGGTCGTAC 60.814 66.667 4.18 0.00 0.00 3.67
156 157 3.296709 CTTGCGCCCTGGTCGTACT 62.297 63.158 4.18 0.00 0.00 2.73
157 158 3.291101 TTGCGCCCTGGTCGTACTC 62.291 63.158 4.18 0.00 0.00 2.59
158 159 4.509737 GCGCCCTGGTCGTACTCC 62.510 72.222 0.00 0.00 0.00 3.85
159 160 2.754658 CGCCCTGGTCGTACTCCT 60.755 66.667 0.00 0.00 0.00 3.69
160 161 2.348888 CGCCCTGGTCGTACTCCTT 61.349 63.158 0.00 0.00 0.00 3.36
161 162 1.885163 CGCCCTGGTCGTACTCCTTT 61.885 60.000 0.00 0.00 0.00 3.11
162 163 0.108281 GCCCTGGTCGTACTCCTTTC 60.108 60.000 0.00 0.00 0.00 2.62
163 164 1.558233 CCCTGGTCGTACTCCTTTCT 58.442 55.000 0.00 0.00 0.00 2.52
164 165 1.900486 CCCTGGTCGTACTCCTTTCTT 59.100 52.381 0.00 0.00 0.00 2.52
165 166 2.302157 CCCTGGTCGTACTCCTTTCTTT 59.698 50.000 0.00 0.00 0.00 2.52
166 167 3.244457 CCCTGGTCGTACTCCTTTCTTTT 60.244 47.826 0.00 0.00 0.00 2.27
167 168 4.386711 CCTGGTCGTACTCCTTTCTTTTT 58.613 43.478 5.74 0.00 0.00 1.94
168 169 4.213482 CCTGGTCGTACTCCTTTCTTTTTG 59.787 45.833 5.74 0.00 0.00 2.44
169 170 4.773013 TGGTCGTACTCCTTTCTTTTTGT 58.227 39.130 5.74 0.00 0.00 2.83
170 171 5.187687 TGGTCGTACTCCTTTCTTTTTGTT 58.812 37.500 5.74 0.00 0.00 2.83
171 172 6.347696 TGGTCGTACTCCTTTCTTTTTGTTA 58.652 36.000 5.74 0.00 0.00 2.41
172 173 6.480981 TGGTCGTACTCCTTTCTTTTTGTTAG 59.519 38.462 5.74 0.00 0.00 2.34
173 174 6.481313 GGTCGTACTCCTTTCTTTTTGTTAGT 59.519 38.462 0.00 0.00 0.00 2.24
174 175 7.307042 GGTCGTACTCCTTTCTTTTTGTTAGTC 60.307 40.741 0.00 0.00 0.00 2.59
175 176 7.437565 GTCGTACTCCTTTCTTTTTGTTAGTCT 59.562 37.037 0.00 0.00 0.00 3.24
176 177 7.437267 TCGTACTCCTTTCTTTTTGTTAGTCTG 59.563 37.037 0.00 0.00 0.00 3.51
177 178 6.378710 ACTCCTTTCTTTTTGTTAGTCTGC 57.621 37.500 0.00 0.00 0.00 4.26
178 179 5.885912 ACTCCTTTCTTTTTGTTAGTCTGCA 59.114 36.000 0.00 0.00 0.00 4.41
179 180 6.547510 ACTCCTTTCTTTTTGTTAGTCTGCAT 59.452 34.615 0.00 0.00 0.00 3.96
180 181 7.719633 ACTCCTTTCTTTTTGTTAGTCTGCATA 59.280 33.333 0.00 0.00 0.00 3.14
181 182 8.635765 TCCTTTCTTTTTGTTAGTCTGCATAT 57.364 30.769 0.00 0.00 0.00 1.78
182 183 9.733556 TCCTTTCTTTTTGTTAGTCTGCATATA 57.266 29.630 0.00 0.00 0.00 0.86
191 192 9.461312 TTTGTTAGTCTGCATATAAGATTTGGT 57.539 29.630 0.00 0.00 0.00 3.67
192 193 8.662781 TGTTAGTCTGCATATAAGATTTGGTC 57.337 34.615 0.00 0.00 0.00 4.02
193 194 8.264347 TGTTAGTCTGCATATAAGATTTGGTCA 58.736 33.333 0.00 0.00 0.00 4.02
194 195 9.109393 GTTAGTCTGCATATAAGATTTGGTCAA 57.891 33.333 0.00 0.00 0.00 3.18
195 196 9.679661 TTAGTCTGCATATAAGATTTGGTCAAA 57.320 29.630 0.00 0.00 34.46 2.69
196 197 8.218338 AGTCTGCATATAAGATTTGGTCAAAG 57.782 34.615 2.55 0.00 33.32 2.77
197 198 7.831193 AGTCTGCATATAAGATTTGGTCAAAGT 59.169 33.333 2.55 0.00 33.32 2.66
198 199 8.125448 GTCTGCATATAAGATTTGGTCAAAGTC 58.875 37.037 2.55 1.51 33.32 3.01
199 200 7.828717 TCTGCATATAAGATTTGGTCAAAGTCA 59.171 33.333 2.55 0.00 33.32 3.41
200 201 8.347004 TGCATATAAGATTTGGTCAAAGTCAA 57.653 30.769 2.55 0.00 33.32 3.18
201 202 8.801299 TGCATATAAGATTTGGTCAAAGTCAAA 58.199 29.630 2.55 0.00 37.29 2.69
202 203 9.076596 GCATATAAGATTTGGTCAAAGTCAAAC 57.923 33.333 2.55 0.00 35.97 2.93
207 208 7.881775 AGATTTGGTCAAAGTCAAACTTAGT 57.118 32.000 2.55 0.00 37.47 2.24
208 209 7.931275 AGATTTGGTCAAAGTCAAACTTAGTC 58.069 34.615 2.55 0.00 37.47 2.59
209 210 7.556275 AGATTTGGTCAAAGTCAAACTTAGTCA 59.444 33.333 2.55 0.00 37.47 3.41
210 211 7.455641 TTTGGTCAAAGTCAAACTTAGTCAA 57.544 32.000 0.00 0.00 37.47 3.18
211 212 6.677781 TGGTCAAAGTCAAACTTAGTCAAG 57.322 37.500 0.00 0.00 37.47 3.02
232 233 8.665643 TCAAGTTTGACCGACTTTATAGAAAA 57.334 30.769 0.00 0.00 35.26 2.29
233 234 9.111613 TCAAGTTTGACCGACTTTATAGAAAAA 57.888 29.630 0.00 0.00 35.26 1.94
234 235 9.382244 CAAGTTTGACCGACTTTATAGAAAAAG 57.618 33.333 0.00 0.00 41.35 2.27
235 236 8.897872 AGTTTGACCGACTTTATAGAAAAAGA 57.102 30.769 3.51 0.00 38.50 2.52
236 237 9.333724 AGTTTGACCGACTTTATAGAAAAAGAA 57.666 29.630 3.51 0.00 38.50 2.52
390 391 9.733556 TTGACTTTAACAAATCTTATAGGCAGA 57.266 29.630 0.00 0.00 28.18 4.26
391 392 9.162764 TGACTTTAACAAATCTTATAGGCAGAC 57.837 33.333 0.00 0.00 0.00 3.51
392 393 9.384764 GACTTTAACAAATCTTATAGGCAGACT 57.615 33.333 0.00 0.00 0.00 3.24
399 400 9.959721 ACAAATCTTATAGGCAGACTAAAAAGA 57.040 29.630 11.94 11.94 39.77 2.52
403 404 8.475331 TCTTATAGGCAGACTAAAAAGAAACG 57.525 34.615 8.42 0.00 36.03 3.60
404 405 7.548075 TCTTATAGGCAGACTAAAAAGAAACGG 59.452 37.037 8.42 0.00 36.03 4.44
405 406 4.081322 AGGCAGACTAAAAAGAAACGGA 57.919 40.909 0.00 0.00 0.00 4.69
406 407 4.065789 AGGCAGACTAAAAAGAAACGGAG 58.934 43.478 0.00 0.00 0.00 4.63
407 408 4.062991 GGCAGACTAAAAAGAAACGGAGA 58.937 43.478 0.00 0.00 0.00 3.71
408 409 4.152580 GGCAGACTAAAAAGAAACGGAGAG 59.847 45.833 0.00 0.00 0.00 3.20
409 410 4.152580 GCAGACTAAAAAGAAACGGAGAGG 59.847 45.833 0.00 0.00 0.00 3.69
410 411 4.691216 CAGACTAAAAAGAAACGGAGAGGG 59.309 45.833 0.00 0.00 0.00 4.30
411 412 4.591924 AGACTAAAAAGAAACGGAGAGGGA 59.408 41.667 0.00 0.00 0.00 4.20
420 421 2.060050 ACGGAGAGGGAGTACATCAG 57.940 55.000 0.00 0.00 0.00 2.90
452 453 2.266055 GAAGCTGTGGTCTCCCGG 59.734 66.667 0.00 0.00 0.00 5.73
453 454 2.526873 AAGCTGTGGTCTCCCGGT 60.527 61.111 0.00 0.00 0.00 5.28
454 455 2.508586 GAAGCTGTGGTCTCCCGGTC 62.509 65.000 0.00 0.00 0.00 4.79
455 456 2.997897 GCTGTGGTCTCCCGGTCT 60.998 66.667 0.00 0.00 0.00 3.85
456 457 2.584391 GCTGTGGTCTCCCGGTCTT 61.584 63.158 0.00 0.00 0.00 3.01
457 458 2.058675 CTGTGGTCTCCCGGTCTTT 58.941 57.895 0.00 0.00 0.00 2.52
458 459 0.037232 CTGTGGTCTCCCGGTCTTTC 60.037 60.000 0.00 0.00 0.00 2.62
459 460 0.471211 TGTGGTCTCCCGGTCTTTCT 60.471 55.000 0.00 0.00 0.00 2.52
460 461 0.037232 GTGGTCTCCCGGTCTTTCTG 60.037 60.000 0.00 0.00 0.00 3.02
461 462 1.192146 TGGTCTCCCGGTCTTTCTGG 61.192 60.000 0.00 0.00 42.06 3.86
462 463 0.903454 GGTCTCCCGGTCTTTCTGGA 60.903 60.000 0.00 0.00 45.09 3.86
463 464 0.974383 GTCTCCCGGTCTTTCTGGAA 59.026 55.000 0.00 0.00 45.09 3.53
464 465 1.066787 GTCTCCCGGTCTTTCTGGAAG 60.067 57.143 0.00 0.00 45.09 3.46
465 466 1.203137 TCTCCCGGTCTTTCTGGAAGA 60.203 52.381 0.00 0.00 45.09 2.87
474 475 4.019983 TCTGGAAGACTCGAGGCC 57.980 61.111 16.58 11.55 38.67 5.19
475 476 1.682684 TCTGGAAGACTCGAGGCCC 60.683 63.158 16.58 10.98 38.67 5.80
476 477 2.683933 TGGAAGACTCGAGGCCCC 60.684 66.667 16.58 17.36 0.00 5.80
477 478 2.683933 GGAAGACTCGAGGCCCCA 60.684 66.667 16.58 0.00 0.00 4.96
478 479 2.726351 GGAAGACTCGAGGCCCCAG 61.726 68.421 16.58 0.00 0.00 4.45
479 480 3.378399 GAAGACTCGAGGCCCCAGC 62.378 68.421 16.58 0.00 38.76 4.85
515 516 4.660938 GAGGCCCCAACCGTGCTT 62.661 66.667 0.00 0.00 33.69 3.91
541 542 1.379776 ACCTTCTAAACCCTTCCCCC 58.620 55.000 0.00 0.00 0.00 5.40
549 550 3.105928 CCCTTCCCCCATCCCCTG 61.106 72.222 0.00 0.00 0.00 4.45
959 962 0.459489 ATTCGCAGCAGAGAGGAGAC 59.541 55.000 0.00 0.00 0.00 3.36
968 971 2.923121 CAGAGAGGAGACAGAGAGAGG 58.077 57.143 0.00 0.00 0.00 3.69
972 975 0.926293 AGGAGACAGAGAGAGGGAGG 59.074 60.000 0.00 0.00 0.00 4.30
1176 1188 2.320383 CGCCTCTACGACGACGAG 59.680 66.667 15.32 6.52 42.66 4.18
1178 1190 1.812922 GCCTCTACGACGACGAGGA 60.813 63.158 28.52 10.05 42.66 3.71
1180 1192 1.630026 CTCTACGACGACGAGGACG 59.370 63.158 15.32 4.49 42.66 4.79
1181 1193 0.799917 CTCTACGACGACGAGGACGA 60.800 60.000 15.32 2.04 42.66 4.20
1330 1375 2.283661 GTTCGCGTTCGTGTTAACAAG 58.716 47.619 10.51 12.77 36.96 3.16
1344 1390 1.601166 AACAAGTTAACCTCGTGGGC 58.399 50.000 8.63 0.00 39.10 5.36
1450 1527 1.672356 GCTTTCTGCGCTGGAGGAA 60.672 57.895 14.70 0.29 0.00 3.36
1531 1617 3.264866 GAAGGTGGACGACGACGCT 62.265 63.158 7.30 0.00 43.96 5.07
1835 2053 2.975103 CGAGTCGAGTAGTCGTAGTG 57.025 55.000 18.99 5.44 46.85 2.74
1841 2059 3.305629 GTCGAGTAGTCGTAGTGGTAGTG 59.694 52.174 18.99 0.00 46.85 2.74
1845 2063 1.085091 AGTCGTAGTGGTAGTGCTCG 58.915 55.000 0.00 0.00 0.00 5.03
1849 2067 0.886563 GTAGTGGTAGTGCTCGTGGT 59.113 55.000 0.00 0.00 0.00 4.16
1853 2071 1.135460 GTGGTAGTGCTCGTGGTAGAC 60.135 57.143 0.00 0.00 0.00 2.59
1862 2080 2.686602 CGTGGTAGACGGATCGAGA 58.313 57.895 0.00 0.00 44.85 4.04
1872 2096 0.582482 CGGATCGAGACGAGTAGTGG 59.418 60.000 5.70 0.00 39.91 4.00
1873 2097 1.666054 GGATCGAGACGAGTAGTGGT 58.334 55.000 0.00 0.00 39.91 4.16
1874 2098 2.800985 CGGATCGAGACGAGTAGTGGTA 60.801 54.545 5.70 0.00 39.91 3.25
1875 2099 2.801679 GGATCGAGACGAGTAGTGGTAG 59.198 54.545 0.00 0.00 39.91 3.18
1876 2100 3.456280 GATCGAGACGAGTAGTGGTAGT 58.544 50.000 0.00 0.00 39.91 2.73
1877 2101 4.500545 GGATCGAGACGAGTAGTGGTAGTA 60.501 50.000 0.00 0.00 39.91 1.82
2056 2398 3.819337 CCCAAGTATGGCATGAGATGAAG 59.181 47.826 10.98 0.00 46.09 3.02
2087 2429 5.363939 GGTGGTGAAATTGGTCATGAAAAA 58.636 37.500 0.00 0.00 0.00 1.94
2088 2430 5.236263 GGTGGTGAAATTGGTCATGAAAAAC 59.764 40.000 0.00 0.00 0.00 2.43
2089 2431 5.236263 GTGGTGAAATTGGTCATGAAAAACC 59.764 40.000 0.00 0.00 36.03 3.27
2090 2432 5.130145 TGGTGAAATTGGTCATGAAAAACCT 59.870 36.000 0.00 0.00 36.47 3.50
2091 2433 5.466393 GGTGAAATTGGTCATGAAAAACCTG 59.534 40.000 0.00 0.00 36.47 4.00
2092 2434 6.048509 GTGAAATTGGTCATGAAAAACCTGT 58.951 36.000 0.00 0.00 36.47 4.00
2093 2435 6.538381 GTGAAATTGGTCATGAAAAACCTGTT 59.462 34.615 0.00 0.00 36.47 3.16
2094 2436 7.708752 GTGAAATTGGTCATGAAAAACCTGTTA 59.291 33.333 0.00 0.00 36.47 2.41
2095 2437 8.428063 TGAAATTGGTCATGAAAAACCTGTTAT 58.572 29.630 0.00 0.00 36.47 1.89
2096 2438 9.271828 GAAATTGGTCATGAAAAACCTGTTATT 57.728 29.630 0.00 0.00 36.47 1.40
2097 2439 9.625747 AAATTGGTCATGAAAAACCTGTTATTT 57.374 25.926 0.00 0.00 36.47 1.40
2098 2440 9.625747 AATTGGTCATGAAAAACCTGTTATTTT 57.374 25.926 0.00 0.00 36.47 1.82
2099 2441 8.655651 TTGGTCATGAAAAACCTGTTATTTTC 57.344 30.769 0.00 4.49 42.87 2.29
2100 2442 7.213678 TGGTCATGAAAAACCTGTTATTTTCC 58.786 34.615 0.00 0.00 42.23 3.13
2101 2443 7.070571 TGGTCATGAAAAACCTGTTATTTTCCT 59.929 33.333 0.00 0.00 42.23 3.36
2102 2444 7.598869 GGTCATGAAAAACCTGTTATTTTCCTC 59.401 37.037 0.00 0.00 42.23 3.71
2103 2445 8.141268 GTCATGAAAAACCTGTTATTTTCCTCA 58.859 33.333 0.00 0.00 42.23 3.86
2104 2446 8.700051 TCATGAAAAACCTGTTATTTTCCTCAA 58.300 29.630 0.00 0.00 42.23 3.02
2105 2447 8.981647 CATGAAAAACCTGTTATTTTCCTCAAG 58.018 33.333 8.11 0.00 42.23 3.02
2106 2448 8.073467 TGAAAAACCTGTTATTTTCCTCAAGT 57.927 30.769 8.11 0.00 42.23 3.16
2107 2449 8.536175 TGAAAAACCTGTTATTTTCCTCAAGTT 58.464 29.630 8.11 0.00 42.23 2.66
2108 2450 9.378551 GAAAAACCTGTTATTTTCCTCAAGTTT 57.621 29.630 0.00 0.00 38.82 2.66
2109 2451 8.716646 AAAACCTGTTATTTTCCTCAAGTTTG 57.283 30.769 0.00 0.00 29.05 2.93
2110 2452 6.405278 ACCTGTTATTTTCCTCAAGTTTGG 57.595 37.500 0.00 0.00 0.00 3.28
2111 2453 5.221441 ACCTGTTATTTTCCTCAAGTTTGGC 60.221 40.000 0.00 0.00 0.00 4.52
2112 2454 5.221422 CCTGTTATTTTCCTCAAGTTTGGCA 60.221 40.000 0.00 0.00 0.00 4.92
2113 2455 6.418057 TGTTATTTTCCTCAAGTTTGGCAT 57.582 33.333 0.00 0.00 0.00 4.40
2114 2456 7.309744 CCTGTTATTTTCCTCAAGTTTGGCATA 60.310 37.037 0.00 0.00 0.00 3.14
2115 2457 8.133024 TGTTATTTTCCTCAAGTTTGGCATAT 57.867 30.769 0.00 0.00 0.00 1.78
2116 2458 8.034215 TGTTATTTTCCTCAAGTTTGGCATATG 58.966 33.333 0.00 0.00 0.00 1.78
2117 2459 6.855763 ATTTTCCTCAAGTTTGGCATATGA 57.144 33.333 6.97 0.00 0.00 2.15
2118 2460 6.855763 TTTTCCTCAAGTTTGGCATATGAT 57.144 33.333 6.97 0.00 0.00 2.45
2119 2461 5.840243 TTCCTCAAGTTTGGCATATGATG 57.160 39.130 6.97 0.00 0.00 3.07
2120 2462 5.114764 TCCTCAAGTTTGGCATATGATGA 57.885 39.130 6.97 0.00 0.00 2.92
2121 2463 5.508567 TCCTCAAGTTTGGCATATGATGAA 58.491 37.500 6.97 0.00 0.00 2.57
2122 2464 5.357878 TCCTCAAGTTTGGCATATGATGAAC 59.642 40.000 6.97 7.10 0.00 3.18
2123 2465 5.359009 CCTCAAGTTTGGCATATGATGAACT 59.641 40.000 6.97 9.21 0.00 3.01
2124 2466 6.127535 CCTCAAGTTTGGCATATGATGAACTT 60.128 38.462 17.67 17.67 36.11 2.66
2125 2467 7.067372 CCTCAAGTTTGGCATATGATGAACTTA 59.933 37.037 20.57 13.10 34.54 2.24
2126 2468 7.761409 TCAAGTTTGGCATATGATGAACTTAC 58.239 34.615 20.57 5.05 34.54 2.34
2127 2469 7.611467 TCAAGTTTGGCATATGATGAACTTACT 59.389 33.333 20.57 6.66 34.54 2.24
2128 2470 7.944729 AGTTTGGCATATGATGAACTTACTT 57.055 32.000 6.97 0.00 0.00 2.24
2129 2471 8.353423 AGTTTGGCATATGATGAACTTACTTT 57.647 30.769 6.97 0.00 0.00 2.66
2130 2472 8.246180 AGTTTGGCATATGATGAACTTACTTTG 58.754 33.333 6.97 0.00 0.00 2.77
2131 2473 6.698008 TGGCATATGATGAACTTACTTTGG 57.302 37.500 6.97 0.00 0.00 3.28
2132 2474 6.186957 TGGCATATGATGAACTTACTTTGGT 58.813 36.000 6.97 0.00 0.00 3.67
2133 2475 6.095300 TGGCATATGATGAACTTACTTTGGTG 59.905 38.462 6.97 0.00 0.00 4.17
2134 2476 6.460123 GGCATATGATGAACTTACTTTGGTGG 60.460 42.308 6.97 0.00 0.00 4.61
2135 2477 6.095440 GCATATGATGAACTTACTTTGGTGGT 59.905 38.462 6.97 0.00 0.00 4.16
2136 2478 5.964958 ATGATGAACTTACTTTGGTGGTG 57.035 39.130 0.00 0.00 0.00 4.17
2137 2479 5.042463 TGATGAACTTACTTTGGTGGTGA 57.958 39.130 0.00 0.00 0.00 4.02
2138 2480 5.063204 TGATGAACTTACTTTGGTGGTGAG 58.937 41.667 0.00 0.00 0.00 3.51
2139 2481 4.764050 TGAACTTACTTTGGTGGTGAGA 57.236 40.909 0.00 0.00 0.00 3.27
2140 2482 5.304686 TGAACTTACTTTGGTGGTGAGAT 57.695 39.130 0.00 0.00 0.00 2.75
2141 2483 5.690865 TGAACTTACTTTGGTGGTGAGATT 58.309 37.500 0.00 0.00 0.00 2.40
2142 2484 5.763204 TGAACTTACTTTGGTGGTGAGATTC 59.237 40.000 0.00 0.00 0.00 2.52
2143 2485 4.315803 ACTTACTTTGGTGGTGAGATTCG 58.684 43.478 0.00 0.00 0.00 3.34
2144 2486 2.930826 ACTTTGGTGGTGAGATTCGT 57.069 45.000 0.00 0.00 0.00 3.85
2145 2487 2.767505 ACTTTGGTGGTGAGATTCGTC 58.232 47.619 0.00 0.00 0.00 4.20
2146 2488 2.104111 ACTTTGGTGGTGAGATTCGTCA 59.896 45.455 0.00 0.00 0.00 4.35
2147 2489 3.244561 ACTTTGGTGGTGAGATTCGTCAT 60.245 43.478 0.00 0.00 0.00 3.06
2148 2490 2.385013 TGGTGGTGAGATTCGTCATG 57.615 50.000 0.00 0.00 0.00 3.07
2149 2491 1.899142 TGGTGGTGAGATTCGTCATGA 59.101 47.619 0.00 0.00 0.00 3.07
2150 2492 2.301583 TGGTGGTGAGATTCGTCATGAA 59.698 45.455 0.00 0.00 41.81 2.57
2151 2493 3.244387 TGGTGGTGAGATTCGTCATGAAA 60.244 43.478 0.00 0.00 40.71 2.69
2152 2494 3.125316 GGTGGTGAGATTCGTCATGAAAC 59.875 47.826 0.00 0.00 40.71 2.78
2167 2509 6.376978 GTCATGAAACTCTGTTGATTTCCTG 58.623 40.000 0.00 0.00 32.44 3.86
2171 2513 5.532406 TGAAACTCTGTTGATTTCCTGAAGG 59.468 40.000 0.00 0.00 32.44 3.46
2226 2864 5.707298 TGAAACTTTGCTGATCTCCTTAAGG 59.293 40.000 15.98 15.98 0.00 2.69
2271 2973 5.222631 GTGGTGAAATTGGTCATGAACTTC 58.777 41.667 12.94 8.22 0.00 3.01
2309 3011 4.144297 AGTTTGGCTTGATGAACTGCTTA 58.856 39.130 0.00 0.00 31.59 3.09
2321 3023 4.920376 TGAACTGCTTAGAACTGTTTTGC 58.080 39.130 0.00 0.00 30.47 3.68
2360 3317 7.835682 TCATGAACTAATGGTGATTTTCCTCAT 59.164 33.333 0.00 0.00 0.00 2.90
2361 3318 9.123902 CATGAACTAATGGTGATTTTCCTCATA 57.876 33.333 0.00 0.00 0.00 2.15
2362 3319 8.506168 TGAACTAATGGTGATTTTCCTCATAC 57.494 34.615 0.00 0.00 0.00 2.39
2369 3326 4.201822 GGTGATTTTCCTCATACTTGACGC 60.202 45.833 0.00 0.00 0.00 5.19
2407 3364 5.222631 GTGGTGAAATTGGTCATGAAACTC 58.777 41.667 0.00 0.00 0.00 3.01
2423 3380 4.758674 TGAAACTCTGCTGATTTCCTCAAG 59.241 41.667 17.41 0.07 32.14 3.02
2430 3387 3.250762 TGCTGATTTCCTCAAGTTTGACG 59.749 43.478 0.00 0.00 32.14 4.35
2440 3397 4.319046 CCTCAAGTTTGACGTGATGAACAG 60.319 45.833 0.00 0.00 36.12 3.16
2547 3528 0.738975 TAGCTAGTCGCGCATGTCTT 59.261 50.000 8.75 0.00 45.59 3.01
2548 3529 0.738975 AGCTAGTCGCGCATGTCTTA 59.261 50.000 8.75 0.00 45.59 2.10
2549 3530 1.338337 AGCTAGTCGCGCATGTCTTAT 59.662 47.619 8.75 0.00 45.59 1.73
2550 3531 1.716581 GCTAGTCGCGCATGTCTTATC 59.283 52.381 8.75 0.00 0.00 1.75
2551 3532 2.858646 GCTAGTCGCGCATGTCTTATCA 60.859 50.000 8.75 0.00 0.00 2.15
2552 3533 1.560923 AGTCGCGCATGTCTTATCAC 58.439 50.000 8.75 0.00 0.00 3.06
2566 3547 4.033014 GTCTTATCACTTTTCGCTGTAGCC 59.967 45.833 0.00 0.00 37.91 3.93
2585 3566 2.703416 CCTGTGCTGCTTTCTATGTCA 58.297 47.619 0.00 0.00 0.00 3.58
2600 3581 7.609760 TTCTATGTCATGTGTGTATGTTTCC 57.390 36.000 0.00 0.00 0.00 3.13
2603 3584 4.323417 TGTCATGTGTGTATGTTTCCTCC 58.677 43.478 0.00 0.00 0.00 4.30
2614 3595 2.766313 TGTTTCCTCCGTTGATCTGTG 58.234 47.619 0.00 0.00 0.00 3.66
2632 3618 1.416030 GTGTTGGCTTGGTTTTCCCAT 59.584 47.619 0.00 0.00 44.74 4.00
2638 3624 2.556559 GGCTTGGTTTTCCCATACCTGA 60.557 50.000 0.00 0.00 44.74 3.86
2640 3626 3.381590 GCTTGGTTTTCCCATACCTGATC 59.618 47.826 0.00 0.00 44.74 2.92
2654 3640 3.421844 ACCTGATCCGCTTAAGCTTTTT 58.578 40.909 24.33 7.27 39.32 1.94
2661 3647 8.142994 TGATCCGCTTAAGCTTTTTCTATAAG 57.857 34.615 24.33 0.91 39.32 1.73
2688 3674 1.005340 GCATTCGTGCCTCTTCTCTG 58.995 55.000 0.00 0.00 0.00 3.35
2723 3709 8.458573 TTGATTTTCTCAAGTTTAACCTGCTA 57.541 30.769 0.00 0.00 38.97 3.49
2731 3717 6.354130 TCAAGTTTAACCTGCTAAACTGAGT 58.646 36.000 8.98 0.00 46.53 3.41
2734 3720 6.120220 AGTTTAACCTGCTAAACTGAGTTGT 58.880 36.000 0.00 0.00 45.85 3.32
2740 3726 4.576463 CCTGCTAAACTGAGTTGTTGAACT 59.424 41.667 0.00 0.00 45.59 3.01
2741 3727 5.484173 TGCTAAACTGAGTTGTTGAACTG 57.516 39.130 0.00 0.00 42.80 3.16
2742 3728 4.941263 TGCTAAACTGAGTTGTTGAACTGT 59.059 37.500 0.00 0.00 42.80 3.55
2743 3729 5.414454 TGCTAAACTGAGTTGTTGAACTGTT 59.586 36.000 0.00 0.00 42.80 3.16
2744 3730 5.965918 GCTAAACTGAGTTGTTGAACTGTTC 59.034 40.000 13.49 13.49 42.80 3.18
2745 3731 4.965119 AACTGAGTTGTTGAACTGTTCC 57.035 40.909 17.26 4.18 42.80 3.62
2746 3732 2.936498 ACTGAGTTGTTGAACTGTTCCG 59.064 45.455 17.26 1.11 42.80 4.30
2747 3733 2.936498 CTGAGTTGTTGAACTGTTCCGT 59.064 45.455 17.26 0.00 42.80 4.69
2748 3734 2.675844 TGAGTTGTTGAACTGTTCCGTG 59.324 45.455 17.26 0.00 42.80 4.94
2749 3735 2.933906 GAGTTGTTGAACTGTTCCGTGA 59.066 45.455 17.26 0.00 42.80 4.35
2750 3736 3.541632 AGTTGTTGAACTGTTCCGTGAT 58.458 40.909 17.26 0.00 41.12 3.06
2751 3737 3.560068 AGTTGTTGAACTGTTCCGTGATC 59.440 43.478 17.26 4.77 41.12 2.92
2752 3738 3.186702 TGTTGAACTGTTCCGTGATCA 57.813 42.857 17.26 0.00 0.00 2.92
2753 3739 3.738982 TGTTGAACTGTTCCGTGATCAT 58.261 40.909 17.26 0.00 0.00 2.45
2782 3768 4.879545 TGTTTGTCCTCTGTGTTTACTTCC 59.120 41.667 0.00 0.00 0.00 3.46
2785 3771 3.067833 GTCCTCTGTGTTTACTTCCTGC 58.932 50.000 0.00 0.00 0.00 4.85
2793 3779 4.702612 TGTGTTTACTTCCTGCAAGAACAA 59.297 37.500 0.00 0.00 35.82 2.83
2798 3784 7.067615 TGTTTACTTCCTGCAAGAACAATAACA 59.932 33.333 0.00 0.96 35.82 2.41
2806 3792 6.238731 CCTGCAAGAACAATAACAGTTTCAGA 60.239 38.462 0.00 0.00 34.07 3.27
2807 3793 6.494842 TGCAAGAACAATAACAGTTTCAGAC 58.505 36.000 0.00 0.00 0.00 3.51
2808 3794 6.318648 TGCAAGAACAATAACAGTTTCAGACT 59.681 34.615 0.00 0.00 39.89 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.569122 AAACCTTGAAGTTGTAGATAAAAGCTA 57.431 29.630 0.00 0.00 0.00 3.32
1 2 8.465273 AAACCTTGAAGTTGTAGATAAAAGCT 57.535 30.769 0.00 0.00 0.00 3.74
15 16 8.857098 GGGAAAGTCTAAAATAAACCTTGAAGT 58.143 33.333 0.00 0.00 0.00 3.01
16 17 8.304596 GGGGAAAGTCTAAAATAAACCTTGAAG 58.695 37.037 0.00 0.00 0.00 3.02
17 18 8.008332 AGGGGAAAGTCTAAAATAAACCTTGAA 58.992 33.333 0.00 0.00 0.00 2.69
18 19 7.532199 AGGGGAAAGTCTAAAATAAACCTTGA 58.468 34.615 0.00 0.00 0.00 3.02
19 20 7.776618 AGGGGAAAGTCTAAAATAAACCTTG 57.223 36.000 0.00 0.00 0.00 3.61
20 21 8.008332 TGAAGGGGAAAGTCTAAAATAAACCTT 58.992 33.333 0.00 0.00 36.25 3.50
21 22 7.450634 GTGAAGGGGAAAGTCTAAAATAAACCT 59.549 37.037 0.00 0.00 0.00 3.50
22 23 7.231925 TGTGAAGGGGAAAGTCTAAAATAAACC 59.768 37.037 0.00 0.00 0.00 3.27
23 24 8.173542 TGTGAAGGGGAAAGTCTAAAATAAAC 57.826 34.615 0.00 0.00 0.00 2.01
24 25 8.770010 TTGTGAAGGGGAAAGTCTAAAATAAA 57.230 30.769 0.00 0.00 0.00 1.40
25 26 8.635328 GTTTGTGAAGGGGAAAGTCTAAAATAA 58.365 33.333 0.00 0.00 0.00 1.40
26 27 7.780745 TGTTTGTGAAGGGGAAAGTCTAAAATA 59.219 33.333 0.00 0.00 0.00 1.40
27 28 6.609616 TGTTTGTGAAGGGGAAAGTCTAAAAT 59.390 34.615 0.00 0.00 0.00 1.82
28 29 5.952947 TGTTTGTGAAGGGGAAAGTCTAAAA 59.047 36.000 0.00 0.00 0.00 1.52
29 30 5.511363 TGTTTGTGAAGGGGAAAGTCTAAA 58.489 37.500 0.00 0.00 0.00 1.85
30 31 5.104277 TCTGTTTGTGAAGGGGAAAGTCTAA 60.104 40.000 0.00 0.00 0.00 2.10
31 32 4.410883 TCTGTTTGTGAAGGGGAAAGTCTA 59.589 41.667 0.00 0.00 0.00 2.59
32 33 3.202151 TCTGTTTGTGAAGGGGAAAGTCT 59.798 43.478 0.00 0.00 0.00 3.24
33 34 3.551846 TCTGTTTGTGAAGGGGAAAGTC 58.448 45.455 0.00 0.00 0.00 3.01
34 35 3.662759 TCTGTTTGTGAAGGGGAAAGT 57.337 42.857 0.00 0.00 0.00 2.66
35 36 3.305608 GCATCTGTTTGTGAAGGGGAAAG 60.306 47.826 0.00 0.00 0.00 2.62
36 37 2.627699 GCATCTGTTTGTGAAGGGGAAA 59.372 45.455 0.00 0.00 0.00 3.13
37 38 2.238521 GCATCTGTTTGTGAAGGGGAA 58.761 47.619 0.00 0.00 0.00 3.97
38 39 1.547675 GGCATCTGTTTGTGAAGGGGA 60.548 52.381 0.00 0.00 0.00 4.81
39 40 0.890683 GGCATCTGTTTGTGAAGGGG 59.109 55.000 0.00 0.00 0.00 4.79
40 41 0.890683 GGGCATCTGTTTGTGAAGGG 59.109 55.000 0.00 0.00 0.00 3.95
41 42 1.270550 GTGGGCATCTGTTTGTGAAGG 59.729 52.381 0.00 0.00 0.00 3.46
42 43 1.270550 GGTGGGCATCTGTTTGTGAAG 59.729 52.381 0.00 0.00 0.00 3.02
43 44 1.327303 GGTGGGCATCTGTTTGTGAA 58.673 50.000 0.00 0.00 0.00 3.18
44 45 0.184692 TGGTGGGCATCTGTTTGTGA 59.815 50.000 0.00 0.00 0.00 3.58
45 46 1.203052 GATGGTGGGCATCTGTTTGTG 59.797 52.381 0.00 0.00 0.00 3.33
46 47 1.076024 AGATGGTGGGCATCTGTTTGT 59.924 47.619 0.00 0.00 37.93 2.83
47 48 1.843368 AGATGGTGGGCATCTGTTTG 58.157 50.000 0.00 0.00 37.93 2.93
48 49 2.450476 GAAGATGGTGGGCATCTGTTT 58.550 47.619 0.00 0.00 39.16 2.83
49 50 1.679944 CGAAGATGGTGGGCATCTGTT 60.680 52.381 0.00 0.00 39.16 3.16
50 51 0.107508 CGAAGATGGTGGGCATCTGT 60.108 55.000 0.00 0.00 39.16 3.41
51 52 0.107508 ACGAAGATGGTGGGCATCTG 60.108 55.000 0.00 0.00 39.16 2.90
52 53 0.179000 GACGAAGATGGTGGGCATCT 59.821 55.000 0.00 0.00 40.77 2.90
53 54 0.815615 GGACGAAGATGGTGGGCATC 60.816 60.000 0.00 0.00 0.00 3.91
54 55 1.224592 GGACGAAGATGGTGGGCAT 59.775 57.895 0.00 0.00 0.00 4.40
55 56 2.184020 CTGGACGAAGATGGTGGGCA 62.184 60.000 0.00 0.00 0.00 5.36
56 57 1.450312 CTGGACGAAGATGGTGGGC 60.450 63.158 0.00 0.00 0.00 5.36
57 58 0.324943 AACTGGACGAAGATGGTGGG 59.675 55.000 0.00 0.00 0.00 4.61
58 59 1.442769 CAACTGGACGAAGATGGTGG 58.557 55.000 0.00 0.00 0.00 4.61
59 60 1.442769 CCAACTGGACGAAGATGGTG 58.557 55.000 0.00 0.00 35.84 4.17
60 61 1.056660 ACCAACTGGACGAAGATGGT 58.943 50.000 1.86 11.56 45.59 3.55
61 62 2.185004 AACCAACTGGACGAAGATGG 57.815 50.000 1.86 10.57 43.78 3.51
62 63 3.432252 GTGTAACCAACTGGACGAAGATG 59.568 47.826 1.86 0.00 38.94 2.90
63 64 3.070446 TGTGTAACCAACTGGACGAAGAT 59.930 43.478 1.86 0.00 38.94 2.40
64 65 2.431419 TGTGTAACCAACTGGACGAAGA 59.569 45.455 1.86 0.00 38.94 2.87
65 66 2.800544 CTGTGTAACCAACTGGACGAAG 59.199 50.000 1.86 0.00 38.94 3.79
66 67 2.431419 TCTGTGTAACCAACTGGACGAA 59.569 45.455 1.86 0.00 38.94 3.85
67 68 2.033372 TCTGTGTAACCAACTGGACGA 58.967 47.619 1.86 0.00 38.94 4.20
68 69 2.404215 CTCTGTGTAACCAACTGGACG 58.596 52.381 1.86 0.00 38.94 4.79
69 70 2.367567 TCCTCTGTGTAACCAACTGGAC 59.632 50.000 1.86 0.00 38.94 4.02
70 71 2.367567 GTCCTCTGTGTAACCAACTGGA 59.632 50.000 1.86 0.00 38.94 3.86
71 72 2.104111 TGTCCTCTGTGTAACCAACTGG 59.896 50.000 0.00 0.00 42.17 4.00
72 73 3.469008 TGTCCTCTGTGTAACCAACTG 57.531 47.619 0.00 0.00 34.36 3.16
73 74 3.306088 CGATGTCCTCTGTGTAACCAACT 60.306 47.826 0.00 0.00 34.36 3.16
74 75 2.993899 CGATGTCCTCTGTGTAACCAAC 59.006 50.000 0.00 0.00 34.36 3.77
75 76 2.894765 TCGATGTCCTCTGTGTAACCAA 59.105 45.455 0.00 0.00 34.36 3.67
76 77 2.492088 CTCGATGTCCTCTGTGTAACCA 59.508 50.000 0.00 0.00 34.36 3.67
77 78 2.492484 ACTCGATGTCCTCTGTGTAACC 59.508 50.000 0.00 0.00 34.36 2.85
78 79 3.851976 ACTCGATGTCCTCTGTGTAAC 57.148 47.619 0.00 0.00 37.35 2.50
79 80 5.190677 TGATACTCGATGTCCTCTGTGTAA 58.809 41.667 0.00 0.00 0.00 2.41
80 81 4.777463 TGATACTCGATGTCCTCTGTGTA 58.223 43.478 0.00 0.00 0.00 2.90
81 82 3.621558 TGATACTCGATGTCCTCTGTGT 58.378 45.455 0.00 0.00 0.00 3.72
82 83 4.639135 TTGATACTCGATGTCCTCTGTG 57.361 45.455 0.00 0.00 0.00 3.66
83 84 5.411781 GTTTTGATACTCGATGTCCTCTGT 58.588 41.667 0.00 0.00 0.00 3.41
84 85 4.806247 GGTTTTGATACTCGATGTCCTCTG 59.194 45.833 0.00 0.00 0.00 3.35
85 86 4.712337 AGGTTTTGATACTCGATGTCCTCT 59.288 41.667 0.00 0.00 0.00 3.69
86 87 5.012328 AGGTTTTGATACTCGATGTCCTC 57.988 43.478 0.00 0.00 0.00 3.71
87 88 4.712337 AGAGGTTTTGATACTCGATGTCCT 59.288 41.667 0.00 0.00 36.40 3.85
88 89 5.012328 AGAGGTTTTGATACTCGATGTCC 57.988 43.478 0.00 0.00 36.40 4.02
89 90 5.897050 AGAGAGGTTTTGATACTCGATGTC 58.103 41.667 0.00 0.00 36.40 3.06
90 91 5.419155 TGAGAGAGGTTTTGATACTCGATGT 59.581 40.000 0.00 0.00 36.40 3.06
91 92 5.895928 TGAGAGAGGTTTTGATACTCGATG 58.104 41.667 0.00 0.00 36.40 3.84
92 93 6.334202 GTTGAGAGAGGTTTTGATACTCGAT 58.666 40.000 0.00 0.00 36.40 3.59
93 94 5.619309 CGTTGAGAGAGGTTTTGATACTCGA 60.619 44.000 0.00 0.00 36.40 4.04
94 95 4.559251 CGTTGAGAGAGGTTTTGATACTCG 59.441 45.833 0.00 0.00 36.40 4.18
95 96 4.865365 CCGTTGAGAGAGGTTTTGATACTC 59.135 45.833 0.00 0.00 0.00 2.59
96 97 4.527038 TCCGTTGAGAGAGGTTTTGATACT 59.473 41.667 0.00 0.00 0.00 2.12
97 98 4.817517 TCCGTTGAGAGAGGTTTTGATAC 58.182 43.478 0.00 0.00 0.00 2.24
98 99 5.186992 TGATCCGTTGAGAGAGGTTTTGATA 59.813 40.000 0.00 0.00 0.00 2.15
99 100 4.020218 TGATCCGTTGAGAGAGGTTTTGAT 60.020 41.667 0.00 0.00 0.00 2.57
100 101 3.323691 TGATCCGTTGAGAGAGGTTTTGA 59.676 43.478 0.00 0.00 0.00 2.69
101 102 3.664107 TGATCCGTTGAGAGAGGTTTTG 58.336 45.455 0.00 0.00 0.00 2.44
102 103 4.351874 TTGATCCGTTGAGAGAGGTTTT 57.648 40.909 0.00 0.00 0.00 2.43
103 104 4.351874 TTTGATCCGTTGAGAGAGGTTT 57.648 40.909 0.00 0.00 0.00 3.27
104 105 4.065789 GTTTTGATCCGTTGAGAGAGGTT 58.934 43.478 0.00 0.00 0.00 3.50
105 106 3.665190 GTTTTGATCCGTTGAGAGAGGT 58.335 45.455 0.00 0.00 0.00 3.85
106 107 2.668457 CGTTTTGATCCGTTGAGAGAGG 59.332 50.000 0.00 0.00 0.00 3.69
107 108 3.318017 ACGTTTTGATCCGTTGAGAGAG 58.682 45.455 0.00 0.00 32.50 3.20
108 109 3.380479 ACGTTTTGATCCGTTGAGAGA 57.620 42.857 0.00 0.00 32.50 3.10
109 110 4.862574 TGATACGTTTTGATCCGTTGAGAG 59.137 41.667 0.00 0.00 38.43 3.20
110 111 4.624024 GTGATACGTTTTGATCCGTTGAGA 59.376 41.667 0.00 0.00 38.43 3.27
111 112 4.201685 GGTGATACGTTTTGATCCGTTGAG 60.202 45.833 0.00 0.00 38.43 3.02
112 113 3.680937 GGTGATACGTTTTGATCCGTTGA 59.319 43.478 0.00 0.00 38.43 3.18
113 114 3.433957 TGGTGATACGTTTTGATCCGTTG 59.566 43.478 0.00 0.00 38.43 4.10
114 115 3.434299 GTGGTGATACGTTTTGATCCGTT 59.566 43.478 0.00 0.00 38.43 4.44
115 116 2.997986 GTGGTGATACGTTTTGATCCGT 59.002 45.455 0.00 0.55 40.87 4.69
116 117 2.350498 GGTGGTGATACGTTTTGATCCG 59.650 50.000 0.00 0.00 0.00 4.18
117 118 2.681344 GGGTGGTGATACGTTTTGATCC 59.319 50.000 0.00 0.00 0.00 3.36
118 119 3.606687 AGGGTGGTGATACGTTTTGATC 58.393 45.455 0.00 0.00 0.00 2.92
119 120 3.713826 AGGGTGGTGATACGTTTTGAT 57.286 42.857 0.00 0.00 0.00 2.57
120 121 3.142951 CAAGGGTGGTGATACGTTTTGA 58.857 45.455 0.00 0.00 0.00 2.69
121 122 2.351350 GCAAGGGTGGTGATACGTTTTG 60.351 50.000 0.00 0.00 0.00 2.44
122 123 1.883926 GCAAGGGTGGTGATACGTTTT 59.116 47.619 0.00 0.00 0.00 2.43
123 124 1.530323 GCAAGGGTGGTGATACGTTT 58.470 50.000 0.00 0.00 0.00 3.60
124 125 0.672401 CGCAAGGGTGGTGATACGTT 60.672 55.000 0.00 0.00 0.00 3.99
125 126 1.079405 CGCAAGGGTGGTGATACGT 60.079 57.895 0.00 0.00 0.00 3.57
126 127 2.461110 GCGCAAGGGTGGTGATACG 61.461 63.158 0.30 0.00 38.28 3.06
127 128 2.112815 GGCGCAAGGGTGGTGATAC 61.113 63.158 10.83 0.00 38.28 2.24
128 129 2.270850 GGCGCAAGGGTGGTGATA 59.729 61.111 10.83 0.00 38.28 2.15
129 130 4.740822 GGGCGCAAGGGTGGTGAT 62.741 66.667 10.83 0.00 38.28 3.06
137 138 4.077184 TACGACCAGGGCGCAAGG 62.077 66.667 17.16 10.36 38.28 3.61
138 139 2.813908 GTACGACCAGGGCGCAAG 60.814 66.667 17.16 0.00 43.44 4.01
139 140 3.291101 GAGTACGACCAGGGCGCAA 62.291 63.158 17.16 0.00 0.00 4.85
140 141 3.755628 GAGTACGACCAGGGCGCA 61.756 66.667 17.16 0.00 0.00 6.09
141 142 4.509737 GGAGTACGACCAGGGCGC 62.510 72.222 17.16 0.00 0.00 6.53
142 143 1.885163 AAAGGAGTACGACCAGGGCG 61.885 60.000 15.24 15.24 0.00 6.13
143 144 0.108281 GAAAGGAGTACGACCAGGGC 60.108 60.000 13.06 0.00 0.00 5.19
144 145 1.558233 AGAAAGGAGTACGACCAGGG 58.442 55.000 13.06 0.00 0.00 4.45
145 146 3.679824 AAAGAAAGGAGTACGACCAGG 57.320 47.619 13.06 0.00 0.00 4.45
146 147 4.814771 ACAAAAAGAAAGGAGTACGACCAG 59.185 41.667 13.06 0.00 0.00 4.00
147 148 4.773013 ACAAAAAGAAAGGAGTACGACCA 58.227 39.130 13.06 0.00 0.00 4.02
148 149 5.746307 AACAAAAAGAAAGGAGTACGACC 57.254 39.130 0.00 4.37 0.00 4.79
149 150 7.437565 AGACTAACAAAAAGAAAGGAGTACGAC 59.562 37.037 0.00 0.00 0.00 4.34
150 151 7.437267 CAGACTAACAAAAAGAAAGGAGTACGA 59.563 37.037 0.00 0.00 0.00 3.43
151 152 7.564988 CAGACTAACAAAAAGAAAGGAGTACG 58.435 38.462 0.00 0.00 0.00 3.67
152 153 7.012044 TGCAGACTAACAAAAAGAAAGGAGTAC 59.988 37.037 0.00 0.00 0.00 2.73
153 154 7.051623 TGCAGACTAACAAAAAGAAAGGAGTA 58.948 34.615 0.00 0.00 0.00 2.59
154 155 5.885912 TGCAGACTAACAAAAAGAAAGGAGT 59.114 36.000 0.00 0.00 0.00 3.85
155 156 6.377327 TGCAGACTAACAAAAAGAAAGGAG 57.623 37.500 0.00 0.00 0.00 3.69
156 157 6.959639 ATGCAGACTAACAAAAAGAAAGGA 57.040 33.333 0.00 0.00 0.00 3.36
165 166 9.461312 ACCAAATCTTATATGCAGACTAACAAA 57.539 29.630 0.00 0.00 0.00 2.83
166 167 9.109393 GACCAAATCTTATATGCAGACTAACAA 57.891 33.333 0.00 0.00 0.00 2.83
167 168 8.264347 TGACCAAATCTTATATGCAGACTAACA 58.736 33.333 0.00 0.00 0.00 2.41
168 169 8.662781 TGACCAAATCTTATATGCAGACTAAC 57.337 34.615 0.00 0.00 0.00 2.34
169 170 9.679661 TTTGACCAAATCTTATATGCAGACTAA 57.320 29.630 0.00 0.00 0.00 2.24
170 171 9.330063 CTTTGACCAAATCTTATATGCAGACTA 57.670 33.333 0.00 0.00 0.00 2.59
171 172 7.831193 ACTTTGACCAAATCTTATATGCAGACT 59.169 33.333 0.00 0.00 0.00 3.24
172 173 7.989826 ACTTTGACCAAATCTTATATGCAGAC 58.010 34.615 0.00 0.00 0.00 3.51
173 174 7.828717 TGACTTTGACCAAATCTTATATGCAGA 59.171 33.333 0.00 0.00 0.00 4.26
174 175 7.988737 TGACTTTGACCAAATCTTATATGCAG 58.011 34.615 0.00 0.00 0.00 4.41
175 176 7.936496 TGACTTTGACCAAATCTTATATGCA 57.064 32.000 0.00 0.00 0.00 3.96
176 177 9.076596 GTTTGACTTTGACCAAATCTTATATGC 57.923 33.333 0.00 0.00 35.14 3.14
181 182 9.403583 ACTAAGTTTGACTTTGACCAAATCTTA 57.596 29.630 8.78 0.00 39.51 2.10
182 183 8.293699 ACTAAGTTTGACTTTGACCAAATCTT 57.706 30.769 8.78 0.00 39.51 2.40
183 184 7.556275 TGACTAAGTTTGACTTTGACCAAATCT 59.444 33.333 8.78 0.00 39.51 2.40
184 185 7.703328 TGACTAAGTTTGACTTTGACCAAATC 58.297 34.615 8.78 0.00 39.51 2.17
185 186 7.639113 TGACTAAGTTTGACTTTGACCAAAT 57.361 32.000 8.78 0.00 39.51 2.32
186 187 7.175990 ACTTGACTAAGTTTGACTTTGACCAAA 59.824 33.333 8.78 0.00 44.57 3.28
187 188 6.657541 ACTTGACTAAGTTTGACTTTGACCAA 59.342 34.615 8.78 10.04 44.57 3.67
188 189 6.177610 ACTTGACTAAGTTTGACTTTGACCA 58.822 36.000 8.78 4.51 44.57 4.02
189 190 6.679327 ACTTGACTAAGTTTGACTTTGACC 57.321 37.500 8.78 2.51 44.57 4.02
207 208 8.665643 TTTTCTATAAAGTCGGTCAAACTTGA 57.334 30.769 0.00 0.00 37.06 3.02
208 209 9.382244 CTTTTTCTATAAAGTCGGTCAAACTTG 57.618 33.333 0.00 0.00 37.06 3.16
209 210 9.333724 TCTTTTTCTATAAAGTCGGTCAAACTT 57.666 29.630 0.00 0.00 38.59 2.66
210 211 8.897872 TCTTTTTCTATAAAGTCGGTCAAACT 57.102 30.769 0.00 0.00 36.67 2.66
364 365 9.733556 TCTGCCTATAAGATTTGTTAAAGTCAA 57.266 29.630 0.00 0.00 0.00 3.18
365 366 9.162764 GTCTGCCTATAAGATTTGTTAAAGTCA 57.837 33.333 0.00 0.00 0.00 3.41
366 367 9.384764 AGTCTGCCTATAAGATTTGTTAAAGTC 57.615 33.333 0.00 0.00 0.00 3.01
373 374 9.959721 TCTTTTTAGTCTGCCTATAAGATTTGT 57.040 29.630 0.00 0.00 29.03 2.83
377 378 9.099454 CGTTTCTTTTTAGTCTGCCTATAAGAT 57.901 33.333 0.00 0.00 31.82 2.40
378 379 7.548075 CCGTTTCTTTTTAGTCTGCCTATAAGA 59.452 37.037 0.00 0.00 30.70 2.10
379 380 7.548075 TCCGTTTCTTTTTAGTCTGCCTATAAG 59.452 37.037 0.00 0.00 0.00 1.73
380 381 7.388437 TCCGTTTCTTTTTAGTCTGCCTATAA 58.612 34.615 0.00 0.00 0.00 0.98
381 382 6.938507 TCCGTTTCTTTTTAGTCTGCCTATA 58.061 36.000 0.00 0.00 0.00 1.31
382 383 5.801380 TCCGTTTCTTTTTAGTCTGCCTAT 58.199 37.500 0.00 0.00 0.00 2.57
383 384 5.011329 TCTCCGTTTCTTTTTAGTCTGCCTA 59.989 40.000 0.00 0.00 0.00 3.93
384 385 4.065789 CTCCGTTTCTTTTTAGTCTGCCT 58.934 43.478 0.00 0.00 0.00 4.75
385 386 4.062991 TCTCCGTTTCTTTTTAGTCTGCC 58.937 43.478 0.00 0.00 0.00 4.85
386 387 4.152580 CCTCTCCGTTTCTTTTTAGTCTGC 59.847 45.833 0.00 0.00 0.00 4.26
387 388 4.691216 CCCTCTCCGTTTCTTTTTAGTCTG 59.309 45.833 0.00 0.00 0.00 3.51
388 389 4.591924 TCCCTCTCCGTTTCTTTTTAGTCT 59.408 41.667 0.00 0.00 0.00 3.24
389 390 4.891260 TCCCTCTCCGTTTCTTTTTAGTC 58.109 43.478 0.00 0.00 0.00 2.59
390 391 4.347292 ACTCCCTCTCCGTTTCTTTTTAGT 59.653 41.667 0.00 0.00 0.00 2.24
391 392 4.895961 ACTCCCTCTCCGTTTCTTTTTAG 58.104 43.478 0.00 0.00 0.00 1.85
392 393 4.968971 ACTCCCTCTCCGTTTCTTTTTA 57.031 40.909 0.00 0.00 0.00 1.52
393 394 3.859061 ACTCCCTCTCCGTTTCTTTTT 57.141 42.857 0.00 0.00 0.00 1.94
394 395 3.644738 TGTACTCCCTCTCCGTTTCTTTT 59.355 43.478 0.00 0.00 0.00 2.27
395 396 3.236896 TGTACTCCCTCTCCGTTTCTTT 58.763 45.455 0.00 0.00 0.00 2.52
396 397 2.885616 TGTACTCCCTCTCCGTTTCTT 58.114 47.619 0.00 0.00 0.00 2.52
397 398 2.599408 TGTACTCCCTCTCCGTTTCT 57.401 50.000 0.00 0.00 0.00 2.52
398 399 2.758979 TGATGTACTCCCTCTCCGTTTC 59.241 50.000 0.00 0.00 0.00 2.78
399 400 2.761208 CTGATGTACTCCCTCTCCGTTT 59.239 50.000 0.00 0.00 0.00 3.60
400 401 2.379972 CTGATGTACTCCCTCTCCGTT 58.620 52.381 0.00 0.00 0.00 4.44
401 402 2.024825 GCTGATGTACTCCCTCTCCGT 61.025 57.143 0.00 0.00 0.00 4.69
402 403 0.671251 GCTGATGTACTCCCTCTCCG 59.329 60.000 0.00 0.00 0.00 4.63
403 404 1.044611 GGCTGATGTACTCCCTCTCC 58.955 60.000 0.00 0.00 0.00 3.71
404 405 1.686052 CTGGCTGATGTACTCCCTCTC 59.314 57.143 0.00 0.00 0.00 3.20
405 406 1.786937 CTGGCTGATGTACTCCCTCT 58.213 55.000 0.00 0.00 0.00 3.69
406 407 0.105778 GCTGGCTGATGTACTCCCTC 59.894 60.000 0.00 0.00 0.00 4.30
407 408 0.618680 TGCTGGCTGATGTACTCCCT 60.619 55.000 0.00 0.00 0.00 4.20
408 409 0.462759 GTGCTGGCTGATGTACTCCC 60.463 60.000 0.00 0.00 0.00 4.30
409 410 0.807667 CGTGCTGGCTGATGTACTCC 60.808 60.000 0.00 0.00 0.00 3.85
410 411 0.173481 TCGTGCTGGCTGATGTACTC 59.827 55.000 0.00 0.00 0.00 2.59
411 412 0.608130 TTCGTGCTGGCTGATGTACT 59.392 50.000 0.00 0.00 0.00 2.73
420 421 3.425938 CTTCGCGATTCGTGCTGGC 62.426 63.158 10.88 0.00 37.28 4.85
453 454 1.546476 GCCTCGAGTCTTCCAGAAAGA 59.454 52.381 12.31 0.00 41.81 2.52
454 455 1.404851 GGCCTCGAGTCTTCCAGAAAG 60.405 57.143 12.31 0.00 36.22 2.62
455 456 0.608640 GGCCTCGAGTCTTCCAGAAA 59.391 55.000 12.31 0.00 0.00 2.52
456 457 1.258445 GGGCCTCGAGTCTTCCAGAA 61.258 60.000 12.31 0.00 0.00 3.02
457 458 1.682684 GGGCCTCGAGTCTTCCAGA 60.683 63.158 12.31 0.00 0.00 3.86
458 459 2.726351 GGGGCCTCGAGTCTTCCAG 61.726 68.421 12.31 0.00 0.00 3.86
459 460 2.683933 GGGGCCTCGAGTCTTCCA 60.684 66.667 12.31 0.00 0.00 3.53
460 461 2.683933 TGGGGCCTCGAGTCTTCC 60.684 66.667 12.31 7.91 0.00 3.46
461 462 2.896443 CTGGGGCCTCGAGTCTTC 59.104 66.667 12.31 0.00 0.00 2.87
462 463 3.394836 GCTGGGGCCTCGAGTCTT 61.395 66.667 12.31 0.00 0.00 3.01
469 470 3.978571 GAAAGACCGCTGGGGCCTC 62.979 68.421 11.10 0.00 45.55 4.70
470 471 4.035102 GAAAGACCGCTGGGGCCT 62.035 66.667 11.10 1.45 45.55 5.19
471 472 4.035102 AGAAAGACCGCTGGGGCC 62.035 66.667 11.10 0.00 45.55 5.80
472 473 2.747855 CAGAAAGACCGCTGGGGC 60.748 66.667 11.10 3.96 44.27 5.80
473 474 2.045926 CCAGAAAGACCGCTGGGG 60.046 66.667 9.49 9.49 46.24 4.96
476 477 3.914984 TCTTCCAGAAAGACCGCTG 57.085 52.632 0.00 0.00 39.12 5.18
495 496 4.760047 CACGGTTGGGGCCTCGAG 62.760 72.222 5.13 5.13 0.00 4.04
515 516 4.202535 GGAAGGGTTTAGAAGGTTCTGGAA 60.203 45.833 2.32 0.00 38.19 3.53
541 542 0.031817 ATTTCTTGGGGCAGGGGATG 60.032 55.000 0.00 0.00 0.00 3.51
549 550 3.503998 GGGAGAGATTTCTTGGGGC 57.496 57.895 0.00 0.00 32.53 5.80
959 962 1.143684 CTCTCTCCCTCCCTCTCTCTG 59.856 61.905 0.00 0.00 0.00 3.35
968 971 2.777692 TCTCTTCTCTCTCTCTCCCTCC 59.222 54.545 0.00 0.00 0.00 4.30
972 975 4.202305 CCTCTCTCTCTTCTCTCTCTCTCC 60.202 54.167 0.00 0.00 0.00 3.71
1178 1190 3.432588 CGCTGGAGGAGTCGTCGT 61.433 66.667 6.74 0.00 0.00 4.34
1180 1192 4.500116 GCCGCTGGAGGAGTCGTC 62.500 72.222 4.18 4.18 0.00 4.20
1183 1195 4.200283 CTCGCCGCTGGAGGAGTC 62.200 72.222 0.00 0.00 32.66 3.36
1184 1196 4.742649 TCTCGCCGCTGGAGGAGT 62.743 66.667 12.26 0.00 32.66 3.85
1267 1288 0.107643 GGCATACCCTGAGAGAAGCC 59.892 60.000 0.00 0.00 0.00 4.35
1302 1331 1.435966 CGAACGCGAACAAACGTCC 60.436 57.895 15.93 0.00 42.68 4.79
1304 1333 1.013106 CACGAACGCGAACAAACGT 60.013 52.632 15.93 11.78 46.07 3.99
1310 1348 2.283661 CTTGTTAACACGAACGCGAAC 58.716 47.619 15.93 4.35 41.64 3.95
1313 1351 2.356386 AACTTGTTAACACGAACGCG 57.644 45.000 18.05 3.53 44.79 6.01
1330 1375 1.471287 GATTTGGCCCACGAGGTTAAC 59.529 52.381 0.00 0.00 38.26 2.01
1336 1381 2.824041 CCCGATTTGGCCCACGAG 60.824 66.667 0.00 0.00 35.87 4.18
1344 1390 2.292267 CTGATCAGAACCCCGATTTGG 58.708 52.381 18.34 0.00 37.55 3.28
1421 1498 4.329545 AGAAAGCAGGCGGCCGAA 62.330 61.111 33.48 0.00 46.50 4.30
1468 1548 2.363018 CCGGCAGTGGAGGAGAGA 60.363 66.667 0.00 0.00 0.00 3.10
1511 1597 2.949106 GTCGTCGTCCACCTTCGA 59.051 61.111 0.00 0.00 0.00 3.71
1833 2051 1.135460 GTCTACCACGAGCACTACCAC 60.135 57.143 0.00 0.00 0.00 4.16
1845 2063 0.304098 CGTCTCGATCCGTCTACCAC 59.696 60.000 0.00 0.00 0.00 4.16
1849 2067 2.360483 ACTACTCGTCTCGATCCGTCTA 59.640 50.000 4.14 0.00 34.61 2.59
1853 2071 0.582482 CCACTACTCGTCTCGATCCG 59.418 60.000 0.00 0.00 34.61 4.18
1862 2080 4.081198 AGCACTACTACTACCACTACTCGT 60.081 45.833 0.00 0.00 0.00 4.18
1872 2096 4.462133 TCCTCCATGAGCACTACTACTAC 58.538 47.826 0.00 0.00 0.00 2.73
1873 2097 4.790718 TCCTCCATGAGCACTACTACTA 57.209 45.455 0.00 0.00 0.00 1.82
1874 2098 3.671740 TCCTCCATGAGCACTACTACT 57.328 47.619 0.00 0.00 0.00 2.57
1875 2099 3.006323 CCATCCTCCATGAGCACTACTAC 59.994 52.174 0.00 0.00 33.80 2.73
1876 2100 3.234353 CCATCCTCCATGAGCACTACTA 58.766 50.000 0.00 0.00 33.80 1.82
1877 2101 2.045524 CCATCCTCCATGAGCACTACT 58.954 52.381 0.00 0.00 33.80 2.57
2056 2398 3.566742 ACCAATTTCACCACCGAAGTAAC 59.433 43.478 0.00 0.00 0.00 2.50
2087 2429 5.221441 GCCAAACTTGAGGAAAATAACAGGT 60.221 40.000 0.00 0.00 0.00 4.00
2088 2430 5.221422 TGCCAAACTTGAGGAAAATAACAGG 60.221 40.000 0.00 0.00 0.00 4.00
2089 2431 5.841810 TGCCAAACTTGAGGAAAATAACAG 58.158 37.500 0.00 0.00 0.00 3.16
2090 2432 5.860941 TGCCAAACTTGAGGAAAATAACA 57.139 34.783 0.00 0.00 0.00 2.41
2091 2433 8.250332 TCATATGCCAAACTTGAGGAAAATAAC 58.750 33.333 0.00 0.00 0.00 1.89
2092 2434 8.359875 TCATATGCCAAACTTGAGGAAAATAA 57.640 30.769 0.00 0.00 0.00 1.40
2093 2435 7.953005 TCATATGCCAAACTTGAGGAAAATA 57.047 32.000 0.00 0.00 0.00 1.40
2094 2436 6.855763 TCATATGCCAAACTTGAGGAAAAT 57.144 33.333 0.00 0.00 0.00 1.82
2095 2437 6.436847 TCATCATATGCCAAACTTGAGGAAAA 59.563 34.615 0.00 0.00 0.00 2.29
2096 2438 5.951148 TCATCATATGCCAAACTTGAGGAAA 59.049 36.000 0.00 0.00 0.00 3.13
2097 2439 5.508567 TCATCATATGCCAAACTTGAGGAA 58.491 37.500 0.00 0.00 0.00 3.36
2098 2440 5.114764 TCATCATATGCCAAACTTGAGGA 57.885 39.130 0.00 0.00 0.00 3.71
2099 2441 5.359009 AGTTCATCATATGCCAAACTTGAGG 59.641 40.000 0.00 0.00 0.00 3.86
2100 2442 6.446781 AGTTCATCATATGCCAAACTTGAG 57.553 37.500 0.00 0.00 0.00 3.02
2101 2443 6.839124 AAGTTCATCATATGCCAAACTTGA 57.161 33.333 19.53 5.13 35.10 3.02
2102 2444 7.765307 AGTAAGTTCATCATATGCCAAACTTG 58.235 34.615 24.31 7.14 36.29 3.16
2103 2445 7.944729 AGTAAGTTCATCATATGCCAAACTT 57.055 32.000 21.85 21.85 38.02 2.66
2104 2446 7.944729 AAGTAAGTTCATCATATGCCAAACT 57.055 32.000 0.00 4.47 0.00 2.66
2105 2447 7.489113 CCAAAGTAAGTTCATCATATGCCAAAC 59.511 37.037 0.00 2.22 0.00 2.93
2106 2448 7.178274 ACCAAAGTAAGTTCATCATATGCCAAA 59.822 33.333 0.00 0.00 0.00 3.28
2107 2449 6.663093 ACCAAAGTAAGTTCATCATATGCCAA 59.337 34.615 0.00 0.00 0.00 4.52
2108 2450 6.095300 CACCAAAGTAAGTTCATCATATGCCA 59.905 38.462 0.00 0.00 0.00 4.92
2109 2451 6.460123 CCACCAAAGTAAGTTCATCATATGCC 60.460 42.308 0.00 0.00 0.00 4.40
2110 2452 6.095440 ACCACCAAAGTAAGTTCATCATATGC 59.905 38.462 0.00 0.00 0.00 3.14
2111 2453 7.336679 TCACCACCAAAGTAAGTTCATCATATG 59.663 37.037 0.00 0.00 0.00 1.78
2112 2454 7.402054 TCACCACCAAAGTAAGTTCATCATAT 58.598 34.615 0.00 0.00 0.00 1.78
2113 2455 6.774673 TCACCACCAAAGTAAGTTCATCATA 58.225 36.000 0.00 0.00 0.00 2.15
2114 2456 5.630121 TCACCACCAAAGTAAGTTCATCAT 58.370 37.500 0.00 0.00 0.00 2.45
2115 2457 5.042463 TCACCACCAAAGTAAGTTCATCA 57.958 39.130 0.00 0.00 0.00 3.07
2116 2458 5.305585 TCTCACCACCAAAGTAAGTTCATC 58.694 41.667 0.00 0.00 0.00 2.92
2117 2459 5.304686 TCTCACCACCAAAGTAAGTTCAT 57.695 39.130 0.00 0.00 0.00 2.57
2118 2460 4.764050 TCTCACCACCAAAGTAAGTTCA 57.236 40.909 0.00 0.00 0.00 3.18
2119 2461 5.107065 CGAATCTCACCACCAAAGTAAGTTC 60.107 44.000 0.00 0.00 0.00 3.01
2120 2462 4.755123 CGAATCTCACCACCAAAGTAAGTT 59.245 41.667 0.00 0.00 0.00 2.66
2121 2463 4.202326 ACGAATCTCACCACCAAAGTAAGT 60.202 41.667 0.00 0.00 0.00 2.24
2122 2464 4.315803 ACGAATCTCACCACCAAAGTAAG 58.684 43.478 0.00 0.00 0.00 2.34
2123 2465 4.202274 TGACGAATCTCACCACCAAAGTAA 60.202 41.667 0.00 0.00 0.00 2.24
2124 2466 3.322541 TGACGAATCTCACCACCAAAGTA 59.677 43.478 0.00 0.00 0.00 2.24
2125 2467 2.104111 TGACGAATCTCACCACCAAAGT 59.896 45.455 0.00 0.00 0.00 2.66
2126 2468 2.766313 TGACGAATCTCACCACCAAAG 58.234 47.619 0.00 0.00 0.00 2.77
2127 2469 2.920724 TGACGAATCTCACCACCAAA 57.079 45.000 0.00 0.00 0.00 3.28
2128 2470 2.301583 TCATGACGAATCTCACCACCAA 59.698 45.455 0.00 0.00 0.00 3.67
2129 2471 1.899142 TCATGACGAATCTCACCACCA 59.101 47.619 0.00 0.00 0.00 4.17
2130 2472 2.672961 TCATGACGAATCTCACCACC 57.327 50.000 0.00 0.00 0.00 4.61
2131 2473 3.997021 AGTTTCATGACGAATCTCACCAC 59.003 43.478 0.00 0.00 29.28 4.16
2132 2474 4.021104 AGAGTTTCATGACGAATCTCACCA 60.021 41.667 12.84 0.00 46.43 4.17
2133 2475 4.328440 CAGAGTTTCATGACGAATCTCACC 59.672 45.833 12.84 0.00 46.43 4.02
2134 2476 4.926238 ACAGAGTTTCATGACGAATCTCAC 59.074 41.667 12.84 0.00 46.43 3.51
2135 2477 5.139435 ACAGAGTTTCATGACGAATCTCA 57.861 39.130 12.84 0.00 46.43 3.27
2136 2478 5.635280 TCAACAGAGTTTCATGACGAATCTC 59.365 40.000 0.00 0.00 45.23 2.75
2137 2479 5.541845 TCAACAGAGTTTCATGACGAATCT 58.458 37.500 0.00 0.00 36.55 2.40
2138 2480 5.845985 TCAACAGAGTTTCATGACGAATC 57.154 39.130 0.00 0.00 32.32 2.52
2139 2481 6.808008 AATCAACAGAGTTTCATGACGAAT 57.192 33.333 0.00 0.00 32.32 3.34
2140 2482 6.293407 GGAAATCAACAGAGTTTCATGACGAA 60.293 38.462 0.00 0.00 34.40 3.85
2141 2483 5.179368 GGAAATCAACAGAGTTTCATGACGA 59.821 40.000 0.00 0.00 34.40 4.20
2142 2484 5.180117 AGGAAATCAACAGAGTTTCATGACG 59.820 40.000 0.00 0.00 34.40 4.35
2143 2485 6.205464 TCAGGAAATCAACAGAGTTTCATGAC 59.795 38.462 9.47 0.00 43.42 3.06
2144 2486 6.298361 TCAGGAAATCAACAGAGTTTCATGA 58.702 36.000 9.47 9.47 44.97 3.07
2145 2487 6.564709 TCAGGAAATCAACAGAGTTTCATG 57.435 37.500 5.64 5.64 42.01 3.07
2146 2488 6.208204 CCTTCAGGAAATCAACAGAGTTTCAT 59.792 38.462 0.00 0.00 37.39 2.57
2147 2489 5.532406 CCTTCAGGAAATCAACAGAGTTTCA 59.468 40.000 0.00 0.00 37.39 2.69
2148 2490 5.532779 ACCTTCAGGAAATCAACAGAGTTTC 59.467 40.000 0.00 0.00 38.94 2.78
2149 2491 5.449553 ACCTTCAGGAAATCAACAGAGTTT 58.550 37.500 0.00 0.00 38.94 2.66
2150 2492 5.053978 ACCTTCAGGAAATCAACAGAGTT 57.946 39.130 0.00 0.00 38.94 3.01
2151 2493 4.713792 ACCTTCAGGAAATCAACAGAGT 57.286 40.909 0.00 0.00 38.94 3.24
2152 2494 4.217118 CCAACCTTCAGGAAATCAACAGAG 59.783 45.833 0.00 0.00 38.94 3.35
2167 2509 3.129287 CAGTTCACCATATGCCAACCTTC 59.871 47.826 0.00 0.00 0.00 3.46
2171 2513 4.036027 CAGATCAGTTCACCATATGCCAAC 59.964 45.833 0.00 0.00 0.00 3.77
2226 2864 1.165270 AATTAGTCCAGCACGCCAAC 58.835 50.000 0.00 0.00 0.00 3.77
2271 2973 4.776743 CCAAACTTGAGAGACAATCAACG 58.223 43.478 0.00 0.00 37.88 4.10
2309 3011 5.111293 CAAATTCACCAGCAAAACAGTTCT 58.889 37.500 0.00 0.00 0.00 3.01
2321 3023 6.573664 TTAGTTCATGACCAAATTCACCAG 57.426 37.500 0.00 0.00 0.00 4.00
2360 3317 0.522626 TCCGTTCATCGCGTCAAGTA 59.477 50.000 5.77 0.00 38.35 2.24
2361 3318 0.108804 ATCCGTTCATCGCGTCAAGT 60.109 50.000 5.77 0.00 38.35 3.16
2362 3319 0.999406 AATCCGTTCATCGCGTCAAG 59.001 50.000 5.77 0.00 38.35 3.02
2369 3326 1.130373 CACCACCAAATCCGTTCATCG 59.870 52.381 0.00 0.00 39.52 3.84
2407 3364 4.612259 CGTCAAACTTGAGGAAATCAGCAG 60.612 45.833 6.33 0.00 43.66 4.24
2423 3380 4.795970 AGTTCTGTTCATCACGTCAAAC 57.204 40.909 0.00 0.00 0.00 2.93
2440 3397 3.568007 TGCCAATTTCACCACAGTAGTTC 59.432 43.478 0.00 0.00 0.00 3.01
2448 3405 4.051237 GAGTTTCTTGCCAATTTCACCAC 58.949 43.478 0.00 0.00 0.00 4.16
2537 3518 3.345714 CGAAAAGTGATAAGACATGCGC 58.654 45.455 0.00 0.00 0.00 6.09
2547 3528 3.056107 ACAGGCTACAGCGAAAAGTGATA 60.056 43.478 0.00 0.00 43.26 2.15
2548 3529 2.289694 ACAGGCTACAGCGAAAAGTGAT 60.290 45.455 0.00 0.00 43.26 3.06
2549 3530 1.070134 ACAGGCTACAGCGAAAAGTGA 59.930 47.619 0.00 0.00 43.26 3.41
2550 3531 1.195448 CACAGGCTACAGCGAAAAGTG 59.805 52.381 0.00 0.00 43.26 3.16
2551 3532 1.512926 CACAGGCTACAGCGAAAAGT 58.487 50.000 0.00 0.00 43.26 2.66
2552 3533 0.166814 GCACAGGCTACAGCGAAAAG 59.833 55.000 0.00 0.00 43.26 2.27
2566 3547 3.688185 ACATGACATAGAAAGCAGCACAG 59.312 43.478 0.00 0.00 0.00 3.66
2580 3561 4.943705 GGAGGAAACATACACACATGACAT 59.056 41.667 0.00 0.00 0.00 3.06
2585 3566 3.695830 ACGGAGGAAACATACACACAT 57.304 42.857 0.00 0.00 0.00 3.21
2600 3581 0.798776 GCCAACACAGATCAACGGAG 59.201 55.000 0.00 0.00 0.00 4.63
2603 3584 1.069022 CCAAGCCAACACAGATCAACG 60.069 52.381 0.00 0.00 0.00 4.10
2638 3624 6.960468 GCTTATAGAAAAAGCTTAAGCGGAT 58.040 36.000 21.33 9.50 44.75 4.18
2654 3640 2.548707 CGAATGCCCAGCTGCTTATAGA 60.549 50.000 8.66 0.00 0.00 1.98
2661 3647 4.487412 GCACGAATGCCCAGCTGC 62.487 66.667 8.66 0.00 46.97 5.25
2706 3692 6.483640 ACTCAGTTTAGCAGGTTAAACTTGAG 59.516 38.462 24.87 24.87 46.42 3.02
2715 3701 4.523083 TCAACAACTCAGTTTAGCAGGTT 58.477 39.130 0.00 0.00 0.00 3.50
2718 3704 5.065218 ACAGTTCAACAACTCAGTTTAGCAG 59.935 40.000 0.00 0.00 41.24 4.24
2721 3707 6.487103 GGAACAGTTCAACAACTCAGTTTAG 58.513 40.000 15.36 0.00 41.24 1.85
2723 3709 4.142687 CGGAACAGTTCAACAACTCAGTTT 60.143 41.667 15.36 0.00 41.24 2.66
2731 3717 3.536570 TGATCACGGAACAGTTCAACAA 58.463 40.909 15.36 0.00 0.00 2.83
2734 3720 5.766150 AAAATGATCACGGAACAGTTCAA 57.234 34.783 15.36 0.00 0.00 2.69
2740 3726 4.909696 ACACAAAAATGATCACGGAACA 57.090 36.364 0.00 0.00 0.00 3.18
2741 3727 5.518487 ACAAACACAAAAATGATCACGGAAC 59.482 36.000 0.00 0.00 0.00 3.62
2742 3728 5.655488 ACAAACACAAAAATGATCACGGAA 58.345 33.333 0.00 0.00 0.00 4.30
2743 3729 5.255710 ACAAACACAAAAATGATCACGGA 57.744 34.783 0.00 0.00 0.00 4.69
2744 3730 4.444056 GGACAAACACAAAAATGATCACGG 59.556 41.667 0.00 0.00 0.00 4.94
2745 3731 5.280945 AGGACAAACACAAAAATGATCACG 58.719 37.500 0.00 0.00 0.00 4.35
2746 3732 6.418819 CAGAGGACAAACACAAAAATGATCAC 59.581 38.462 0.00 0.00 0.00 3.06
2747 3733 6.096705 ACAGAGGACAAACACAAAAATGATCA 59.903 34.615 0.00 0.00 0.00 2.92
2748 3734 6.418819 CACAGAGGACAAACACAAAAATGATC 59.581 38.462 0.00 0.00 0.00 2.92
2749 3735 6.127366 ACACAGAGGACAAACACAAAAATGAT 60.127 34.615 0.00 0.00 0.00 2.45
2750 3736 5.184864 ACACAGAGGACAAACACAAAAATGA 59.815 36.000 0.00 0.00 0.00 2.57
2751 3737 5.410067 ACACAGAGGACAAACACAAAAATG 58.590 37.500 0.00 0.00 0.00 2.32
2752 3738 5.659440 ACACAGAGGACAAACACAAAAAT 57.341 34.783 0.00 0.00 0.00 1.82
2753 3739 5.461032 AACACAGAGGACAAACACAAAAA 57.539 34.783 0.00 0.00 0.00 1.94
2782 3768 6.634436 GTCTGAAACTGTTATTGTTCTTGCAG 59.366 38.462 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.