Multiple sequence alignment - TraesCS7B01G083200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G083200 chr7B 100.000 3089 0 0 1 3089 94119365 94116277 0.000000e+00 5705.0
1 TraesCS7B01G083200 chr7B 92.580 1806 110 17 1 1795 94051808 94050016 0.000000e+00 2571.0
2 TraesCS7B01G083200 chr7B 87.630 1730 116 45 670 2336 157808101 157809795 0.000000e+00 1919.0
3 TraesCS7B01G083200 chr7B 92.770 1314 48 26 921 2219 94186390 94185109 0.000000e+00 1857.0
4 TraesCS7B01G083200 chr7B 90.766 1267 45 30 735 1984 93650387 93651598 0.000000e+00 1626.0
5 TraesCS7B01G083200 chr7B 88.083 1393 95 34 836 2215 93571370 93572704 0.000000e+00 1587.0
6 TraesCS7B01G083200 chr7B 94.473 778 23 6 1455 2219 94143107 94142337 0.000000e+00 1181.0
7 TraesCS7B01G083200 chr7B 86.677 638 47 19 735 1359 93864369 93864981 0.000000e+00 673.0
8 TraesCS7B01G083200 chr7B 92.366 131 9 1 576 705 93647657 93647787 5.260000e-43 185.0
9 TraesCS7B01G083200 chr7D 89.230 1597 106 31 813 2381 132764705 132763147 0.000000e+00 1936.0
10 TraesCS7B01G083200 chr7D 89.149 1539 106 32 876 2381 132830978 132829468 0.000000e+00 1860.0
11 TraesCS7B01G083200 chr7D 87.729 1638 111 46 736 2334 194129155 194130741 0.000000e+00 1829.0
12 TraesCS7B01G083200 chr7D 89.617 1358 68 26 840 2178 132156996 132158299 0.000000e+00 1659.0
13 TraesCS7B01G083200 chr7D 89.291 1326 90 29 1068 2381 132741220 132742505 0.000000e+00 1615.0
14 TraesCS7B01G083200 chr7D 85.510 1539 124 52 836 2334 132135512 132136991 0.000000e+00 1515.0
15 TraesCS7B01G083200 chr7D 81.519 698 105 19 7 690 132155840 132156527 1.250000e-153 553.0
16 TraesCS7B01G083200 chr7D 80.347 346 43 15 2057 2381 132158116 132158457 3.980000e-59 239.0
17 TraesCS7B01G083200 chr7D 83.486 218 17 11 2181 2380 132138043 132138259 5.260000e-43 185.0
18 TraesCS7B01G083200 chr7D 97.403 77 2 0 735 811 132156923 132156999 6.950000e-27 132.0
19 TraesCS7B01G083200 chr7A 86.038 1590 148 41 836 2381 131187678 131186119 0.000000e+00 1639.0
20 TraesCS7B01G083200 chr7A 86.969 1435 92 56 978 2381 210252291 210253661 0.000000e+00 1526.0
21 TraesCS7B01G083200 chr7A 84.050 1674 163 57 3 1623 130890718 130892340 0.000000e+00 1517.0
22 TraesCS7B01G083200 chr7A 87.749 1257 73 27 1128 2351 131109279 131108071 0.000000e+00 1393.0
23 TraesCS7B01G083200 chr7A 88.689 946 50 23 1414 2334 203697311 203698224 0.000000e+00 1101.0
24 TraesCS7B01G083200 chr7A 81.694 1027 131 29 3 983 131110664 131109649 0.000000e+00 802.0
25 TraesCS7B01G083200 chr7A 86.740 724 52 27 1615 2334 130893568 130894251 0.000000e+00 765.0
26 TraesCS7B01G083200 chr7A 88.802 509 47 7 2381 2884 320242385 320242888 1.570000e-172 616.0
27 TraesCS7B01G083200 chr7A 82.114 246 22 14 2089 2334 130784691 130784914 1.130000e-44 191.0
28 TraesCS7B01G083200 chr7A 81.928 249 23 14 2089 2337 131119244 131119018 1.130000e-44 191.0
29 TraesCS7B01G083200 chr6B 95.763 708 28 2 2383 3089 466782983 466782277 0.000000e+00 1140.0
30 TraesCS7B01G083200 chr5D 93.362 693 41 5 2386 3075 557042580 557041890 0.000000e+00 1020.0
31 TraesCS7B01G083200 chr5D 91.164 713 47 9 2384 3089 396950136 396949433 0.000000e+00 953.0
32 TraesCS7B01G083200 chr5B 89.640 695 54 11 2384 3075 695996521 695995842 0.000000e+00 869.0
33 TraesCS7B01G083200 chr5B 90.909 506 37 6 2384 2884 516546214 516545713 0.000000e+00 671.0
34 TraesCS7B01G083200 chr5B 90.909 506 37 7 2384 2884 656238125 656237624 0.000000e+00 671.0
35 TraesCS7B01G083200 chr5B 89.723 506 42 7 2384 2884 596877028 596877528 3.360000e-179 638.0
36 TraesCS7B01G083200 chr5B 94.836 213 11 0 2877 3089 695995997 695995785 1.780000e-87 333.0
37 TraesCS7B01G083200 chr1B 89.879 662 41 9 2394 3054 8712898 8713534 0.000000e+00 828.0
38 TraesCS7B01G083200 chr4A 86.846 707 48 20 2384 3089 613772631 613771969 0.000000e+00 749.0
39 TraesCS7B01G083200 chr4B 89.723 506 43 6 2384 2884 434343735 434344236 3.360000e-179 638.0
40 TraesCS7B01G083200 chr3B 89.495 495 44 5 2395 2884 184537345 184536854 1.220000e-173 619.0
41 TraesCS7B01G083200 chr4D 87.379 206 24 2 2883 3087 450216194 450215990 5.150000e-58 235.0
42 TraesCS7B01G083200 chr6D 78.261 138 24 5 112 244 224744624 224744760 1.970000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G083200 chr7B 94116277 94119365 3088 True 5705.00 5705 100.0000 1 3089 1 chr7B.!!$R2 3088
1 TraesCS7B01G083200 chr7B 94050016 94051808 1792 True 2571.00 2571 92.5800 1 1795 1 chr7B.!!$R1 1794
2 TraesCS7B01G083200 chr7B 157808101 157809795 1694 False 1919.00 1919 87.6300 670 2336 1 chr7B.!!$F3 1666
3 TraesCS7B01G083200 chr7B 94185109 94186390 1281 True 1857.00 1857 92.7700 921 2219 1 chr7B.!!$R4 1298
4 TraesCS7B01G083200 chr7B 93571370 93572704 1334 False 1587.00 1587 88.0830 836 2215 1 chr7B.!!$F1 1379
5 TraesCS7B01G083200 chr7B 94142337 94143107 770 True 1181.00 1181 94.4730 1455 2219 1 chr7B.!!$R3 764
6 TraesCS7B01G083200 chr7B 93647657 93651598 3941 False 905.50 1626 91.5660 576 1984 2 chr7B.!!$F4 1408
7 TraesCS7B01G083200 chr7B 93864369 93864981 612 False 673.00 673 86.6770 735 1359 1 chr7B.!!$F2 624
8 TraesCS7B01G083200 chr7D 132763147 132764705 1558 True 1936.00 1936 89.2300 813 2381 1 chr7D.!!$R1 1568
9 TraesCS7B01G083200 chr7D 132829468 132830978 1510 True 1860.00 1860 89.1490 876 2381 1 chr7D.!!$R2 1505
10 TraesCS7B01G083200 chr7D 194129155 194130741 1586 False 1829.00 1829 87.7290 736 2334 1 chr7D.!!$F2 1598
11 TraesCS7B01G083200 chr7D 132741220 132742505 1285 False 1615.00 1615 89.2910 1068 2381 1 chr7D.!!$F1 1313
12 TraesCS7B01G083200 chr7D 132135512 132138259 2747 False 850.00 1515 84.4980 836 2380 2 chr7D.!!$F3 1544
13 TraesCS7B01G083200 chr7D 132155840 132158457 2617 False 645.75 1659 87.2215 7 2381 4 chr7D.!!$F4 2374
14 TraesCS7B01G083200 chr7A 131186119 131187678 1559 True 1639.00 1639 86.0380 836 2381 1 chr7A.!!$R2 1545
15 TraesCS7B01G083200 chr7A 210252291 210253661 1370 False 1526.00 1526 86.9690 978 2381 1 chr7A.!!$F3 1403
16 TraesCS7B01G083200 chr7A 130890718 130894251 3533 False 1141.00 1517 85.3950 3 2334 2 chr7A.!!$F5 2331
17 TraesCS7B01G083200 chr7A 203697311 203698224 913 False 1101.00 1101 88.6890 1414 2334 1 chr7A.!!$F2 920
18 TraesCS7B01G083200 chr7A 131108071 131110664 2593 True 1097.50 1393 84.7215 3 2351 2 chr7A.!!$R3 2348
19 TraesCS7B01G083200 chr7A 320242385 320242888 503 False 616.00 616 88.8020 2381 2884 1 chr7A.!!$F4 503
20 TraesCS7B01G083200 chr6B 466782277 466782983 706 True 1140.00 1140 95.7630 2383 3089 1 chr6B.!!$R1 706
21 TraesCS7B01G083200 chr5D 557041890 557042580 690 True 1020.00 1020 93.3620 2386 3075 1 chr5D.!!$R2 689
22 TraesCS7B01G083200 chr5D 396949433 396950136 703 True 953.00 953 91.1640 2384 3089 1 chr5D.!!$R1 705
23 TraesCS7B01G083200 chr5B 516545713 516546214 501 True 671.00 671 90.9090 2384 2884 1 chr5B.!!$R1 500
24 TraesCS7B01G083200 chr5B 656237624 656238125 501 True 671.00 671 90.9090 2384 2884 1 chr5B.!!$R2 500
25 TraesCS7B01G083200 chr5B 596877028 596877528 500 False 638.00 638 89.7230 2384 2884 1 chr5B.!!$F1 500
26 TraesCS7B01G083200 chr5B 695995785 695996521 736 True 601.00 869 92.2380 2384 3089 2 chr5B.!!$R3 705
27 TraesCS7B01G083200 chr1B 8712898 8713534 636 False 828.00 828 89.8790 2394 3054 1 chr1B.!!$F1 660
28 TraesCS7B01G083200 chr4A 613771969 613772631 662 True 749.00 749 86.8460 2384 3089 1 chr4A.!!$R1 705
29 TraesCS7B01G083200 chr4B 434343735 434344236 501 False 638.00 638 89.7230 2384 2884 1 chr4B.!!$F1 500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 44 0.383231 GCTTGCCATGGTAGCATCAC 59.617 55.0 26.45 5.63 40.59 3.06 F
1890 6343 0.246360 CGTGGTAGTGCTCATGGTCA 59.754 55.0 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1911 6368 1.040646 TCAACAAGGCGTCTCTCACT 58.959 50.0 0.0 0.0 0.00 3.41 R
2891 8043 6.806751 ACATTACTGTGATATACGCTGAACT 58.193 36.0 0.0 0.0 33.22 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 44 0.383231 GCTTGCCATGGTAGCATCAC 59.617 55.000 26.45 5.63 40.59 3.06
101 108 9.486123 TTTTTATGAATTTCTCATGGGACCATA 57.514 29.630 3.05 0.00 44.84 2.74
102 109 9.659135 TTTTATGAATTTCTCATGGGACCATAT 57.341 29.630 3.05 0.00 44.84 1.78
105 112 6.855667 TGAATTTCTCATGGGACCATATGAT 58.144 36.000 3.65 0.00 34.91 2.45
254 271 5.481200 TTGACATGTACCGAAAACGAAAA 57.519 34.783 0.00 0.00 0.00 2.29
255 272 5.481200 TGACATGTACCGAAAACGAAAAA 57.519 34.783 0.00 0.00 0.00 1.94
257 274 6.496571 TGACATGTACCGAAAACGAAAAATT 58.503 32.000 0.00 0.00 0.00 1.82
258 275 6.633634 TGACATGTACCGAAAACGAAAAATTC 59.366 34.615 0.00 0.00 0.00 2.17
264 281 8.944029 TGTACCGAAAACGAAAAATTCCATATA 58.056 29.630 0.00 0.00 0.00 0.86
330 347 7.973388 GGATCTGAGATTTAATCATAGACCTCG 59.027 40.741 7.74 0.00 0.00 4.63
336 353 2.176247 AATCATAGACCTCGGGTGGT 57.824 50.000 0.00 0.00 44.10 4.16
361 378 1.202533 TCTGCTTGGTTAGGATAGCGC 60.203 52.381 0.00 0.00 36.43 5.92
370 387 0.673985 TAGGATAGCGCTCGTGCAAT 59.326 50.000 16.34 0.00 39.64 3.56
383 400 4.615912 GCTCGTGCAATTTTTATGTCCTGT 60.616 41.667 4.26 0.00 39.41 4.00
387 404 7.598278 TCGTGCAATTTTTATGTCCTGTTTAT 58.402 30.769 0.00 0.00 0.00 1.40
390 407 9.369904 GTGCAATTTTTATGTCCTGTTTATGAT 57.630 29.630 0.00 0.00 0.00 2.45
403 420 7.905493 GTCCTGTTTATGATTTTCGAATCTGAC 59.095 37.037 0.00 0.00 0.00 3.51
410 427 2.093306 TTTCGAATCTGACGTGGCAT 57.907 45.000 0.00 0.00 0.00 4.40
417 434 2.359850 TGACGTGGCATGGCTTCC 60.360 61.111 21.08 7.40 0.00 3.46
546 579 5.536161 CCTTGGATTTGGTGGGTCATTATAG 59.464 44.000 0.00 0.00 0.00 1.31
547 580 5.725551 TGGATTTGGTGGGTCATTATAGT 57.274 39.130 0.00 0.00 0.00 2.12
549 582 6.597562 TGGATTTGGTGGGTCATTATAGTAC 58.402 40.000 0.00 0.00 0.00 2.73
551 584 5.936187 TTTGGTGGGTCATTATAGTACGA 57.064 39.130 0.00 0.00 0.00 3.43
553 586 6.488769 TTGGTGGGTCATTATAGTACGATT 57.511 37.500 0.00 0.00 0.00 3.34
554 587 6.488769 TGGTGGGTCATTATAGTACGATTT 57.511 37.500 0.00 0.00 0.00 2.17
555 588 6.891388 TGGTGGGTCATTATAGTACGATTTT 58.109 36.000 0.00 0.00 0.00 1.82
556 589 8.020777 TGGTGGGTCATTATAGTACGATTTTA 57.979 34.615 0.00 0.00 0.00 1.52
1027 3988 6.669125 TCACCACAAGAATCCAAAATCATT 57.331 33.333 0.00 0.00 0.00 2.57
1888 6341 0.246635 GTCGTGGTAGTGCTCATGGT 59.753 55.000 0.00 0.00 0.00 3.55
1889 6342 0.530744 TCGTGGTAGTGCTCATGGTC 59.469 55.000 0.00 0.00 0.00 4.02
1890 6343 0.246360 CGTGGTAGTGCTCATGGTCA 59.754 55.000 0.00 0.00 0.00 4.02
1891 6344 1.134699 CGTGGTAGTGCTCATGGTCAT 60.135 52.381 0.00 0.00 0.00 3.06
1892 6345 2.283298 GTGGTAGTGCTCATGGTCATG 58.717 52.381 4.67 4.67 40.09 3.07
1893 6346 1.210234 TGGTAGTGCTCATGGTCATGG 59.790 52.381 10.61 3.75 39.24 3.66
1905 6358 2.366837 TCATGGAGGATGGCCGGT 60.367 61.111 1.90 0.00 39.96 5.28
1944 6408 3.494749 CCTTGTTGATGTGGGCATGTTTT 60.495 43.478 0.00 0.00 35.07 2.43
2104 6589 3.243367 TGTTGATTTCCTCAAGTTTGGCG 60.243 43.478 0.00 0.00 44.44 5.69
2111 6596 4.746535 TCCTCAAGTTTGGCGTATGATA 57.253 40.909 0.00 0.00 0.00 2.15
2255 6751 7.224297 TGAACTACTTTGATTGTCTTAAGCCT 58.776 34.615 0.00 0.00 0.00 4.58
2259 6755 8.914011 ACTACTTTGATTGTCTTAAGCCTTTTT 58.086 29.630 0.00 0.00 0.00 1.94
2282 6779 8.567285 TTTTATCTTTTCCTGGTCTTGATCTC 57.433 34.615 0.00 0.00 0.00 2.75
2295 6792 7.050377 TGGTCTTGATCTCTATTGCTTTAAGG 58.950 38.462 0.00 0.00 0.00 2.69
2361 6885 4.204028 AGTTGGTGCGGGCAGGTT 62.204 61.111 0.00 0.00 0.00 3.50
2390 6914 7.607607 GGTTGATGATTTTTGCTAGGGAAAAAT 59.392 33.333 17.61 17.61 42.80 1.82
2434 6958 1.002087 AGAGGTTCGGCGAATCAAACT 59.998 47.619 31.88 23.48 0.00 2.66
2463 6988 3.408634 CAAATCCCTGTCGTTTACACCT 58.591 45.455 0.00 0.00 33.45 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.368739 GCTACCATGGCAAGCTTTGAAAT 60.369 43.478 25.37 0.74 33.40 2.17
12 13 1.545582 GCTACCATGGCAAGCTTTGAA 59.454 47.619 25.37 0.00 33.40 2.69
77 84 9.081204 CATATGGTCCCATGAGAAATTCATAAA 57.919 33.333 9.11 0.00 44.76 1.40
119 128 8.043710 TCAAGTTTGTTTTGTACATTGGGAAAT 58.956 29.630 0.00 0.00 36.44 2.17
125 134 8.109391 CACATGTCAAGTTTGTTTTGTACATTG 58.891 33.333 0.00 0.00 36.44 2.82
126 135 8.031864 TCACATGTCAAGTTTGTTTTGTACATT 58.968 29.630 0.00 0.00 36.44 2.71
127 136 7.542890 TCACATGTCAAGTTTGTTTTGTACAT 58.457 30.769 0.00 0.00 36.44 2.29
232 249 5.481200 TTTTCGTTTTCGGTACATGTCAA 57.519 34.783 0.00 0.00 44.25 3.18
235 252 5.916320 GGAATTTTTCGTTTTCGGTACATGT 59.084 36.000 2.69 2.69 44.25 3.21
244 261 9.914923 GGCAAATATATGGAATTTTTCGTTTTC 57.085 29.630 0.00 0.00 0.00 2.29
248 265 6.983890 GGTGGCAAATATATGGAATTTTTCGT 59.016 34.615 0.00 0.00 0.00 3.85
249 266 7.209475 AGGTGGCAAATATATGGAATTTTTCG 58.791 34.615 0.00 0.00 0.00 3.46
254 271 8.546083 TTACAAGGTGGCAAATATATGGAATT 57.454 30.769 0.00 0.00 0.00 2.17
255 272 8.546083 TTTACAAGGTGGCAAATATATGGAAT 57.454 30.769 0.00 0.00 0.00 3.01
257 274 7.617723 ACTTTTACAAGGTGGCAAATATATGGA 59.382 33.333 0.00 0.00 33.82 3.41
258 275 7.781056 ACTTTTACAAGGTGGCAAATATATGG 58.219 34.615 0.00 0.00 33.82 2.74
316 333 3.323774 ACCACCCGAGGTCTATGATTA 57.676 47.619 0.00 0.00 37.28 1.75
330 347 4.021925 AAGCAGAGCCGACCACCC 62.022 66.667 0.00 0.00 0.00 4.61
336 353 0.902984 TCCTAACCAAGCAGAGCCGA 60.903 55.000 0.00 0.00 0.00 5.54
361 378 5.046910 ACAGGACATAAAAATTGCACGAG 57.953 39.130 0.00 0.00 0.00 4.18
383 400 6.674519 GCCACGTCAGATTCGAAAATCATAAA 60.675 38.462 0.00 0.00 43.21 1.40
387 404 2.415168 GCCACGTCAGATTCGAAAATCA 59.585 45.455 0.00 0.00 43.21 2.57
390 407 1.872388 TGCCACGTCAGATTCGAAAA 58.128 45.000 0.00 0.00 0.00 2.29
403 420 2.360350 ACAGGAAGCCATGCCACG 60.360 61.111 0.00 0.00 0.00 4.94
410 427 1.210478 GGATCTTAGCACAGGAAGCCA 59.790 52.381 0.00 0.00 0.00 4.75
417 434 3.441244 TGCACGGATCTTAGCACAG 57.559 52.632 0.00 0.00 31.05 3.66
516 549 3.336694 ACCCACCAAATCCAAGGTTATCT 59.663 43.478 0.00 0.00 35.52 1.98
1027 3988 4.384098 CCTCTCTTCTCTCTCTCTGCTGTA 60.384 50.000 0.00 0.00 0.00 2.74
1888 6341 2.366837 ACCGGCCATCCTCCATGA 60.367 61.111 0.00 0.00 33.80 3.07
1889 6342 2.203252 CACCGGCCATCCTCCATG 60.203 66.667 0.00 0.00 0.00 3.66
1890 6343 4.195334 GCACCGGCCATCCTCCAT 62.195 66.667 0.00 0.00 0.00 3.41
1893 6346 4.899239 CTCGCACCGGCCATCCTC 62.899 72.222 0.00 0.00 36.38 3.71
1905 6358 2.691771 GGCGTCTCTCACTCTCGCA 61.692 63.158 9.79 0.00 46.98 5.10
1911 6368 1.040646 TCAACAAGGCGTCTCTCACT 58.959 50.000 0.00 0.00 0.00 3.41
1944 6408 2.929531 TCAACGAAGCAAAACAAGCA 57.070 40.000 0.00 0.00 0.00 3.91
2104 6589 5.295787 TCGCCACCAAATCAGTTTATCATAC 59.704 40.000 0.00 0.00 0.00 2.39
2111 6596 4.057432 CAAATTCGCCACCAAATCAGTTT 58.943 39.130 0.00 0.00 0.00 2.66
2259 6755 7.502060 AGAGATCAAGACCAGGAAAAGATAA 57.498 36.000 0.00 0.00 0.00 1.75
2269 6765 7.226325 CCTTAAAGCAATAGAGATCAAGACCAG 59.774 40.741 0.00 0.00 0.00 4.00
2270 6766 7.050377 CCTTAAAGCAATAGAGATCAAGACCA 58.950 38.462 0.00 0.00 0.00 4.02
2272 6768 8.499403 AACCTTAAAGCAATAGAGATCAAGAC 57.501 34.615 0.00 0.00 0.00 3.01
2295 6792 3.726291 TGCCCAGCTTTTTACAGAAAC 57.274 42.857 0.00 0.00 0.00 2.78
2359 6883 6.095377 CCTAGCAAAAATCATCAACCAGAAC 58.905 40.000 0.00 0.00 0.00 3.01
2361 6885 4.706476 CCCTAGCAAAAATCATCAACCAGA 59.294 41.667 0.00 0.00 0.00 3.86
2390 6914 9.111613 TCTACGAGTTCAAGGTTTAAAATGAAA 57.888 29.630 11.66 0.32 33.93 2.69
2434 6958 3.170717 ACGACAGGGATTTGGACTTAGA 58.829 45.455 0.00 0.00 0.00 2.10
2463 6988 4.497291 AGACCGGGAATGCATAGTTTAA 57.503 40.909 6.32 0.00 0.00 1.52
2891 8043 6.806751 ACATTACTGTGATATACGCTGAACT 58.193 36.000 0.00 0.00 33.22 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.