Multiple sequence alignment - TraesCS7B01G082600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G082600 chr7B 100.000 2590 0 0 1 2590 93442294 93439705 0.000000e+00 4783.0
1 TraesCS7B01G082600 chr7B 80.214 1213 174 41 980 2167 94263826 94264997 0.000000e+00 850.0
2 TraesCS7B01G082600 chr7B 80.778 437 79 4 1397 1830 157808874 157809308 1.150000e-88 337.0
3 TraesCS7B01G082600 chr7B 82.935 293 32 14 1888 2167 94142700 94142413 5.530000e-62 248.0
4 TraesCS7B01G082600 chr7B 93.827 81 5 0 2432 2512 93439783 93439863 3.500000e-24 122.0
5 TraesCS7B01G082600 chr7D 92.170 894 31 9 1254 2129 131823100 131822228 0.000000e+00 1227.0
6 TraesCS7B01G082600 chr7D 85.100 698 85 12 1463 2152 133194153 133194839 0.000000e+00 695.0
7 TraesCS7B01G082600 chr7D 92.857 406 20 8 2041 2437 131822206 131821801 4.800000e-162 580.0
8 TraesCS7B01G082600 chr7D 80.549 437 80 4 1397 1830 194129817 194130251 5.340000e-87 331.0
9 TraesCS7B01G082600 chr7D 80.317 442 76 7 1397 1829 132741563 132742002 8.940000e-85 324.0
10 TraesCS7B01G082600 chr7D 84.028 288 30 11 1890 2165 194130253 194130536 1.980000e-66 263.0
11 TraesCS7B01G082600 chr7D 82.292 288 36 12 1890 2167 132763675 132763393 4.310000e-58 235.0
12 TraesCS7B01G082600 chr7D 81.164 292 31 12 1883 2167 132741994 132742268 2.020000e-51 213.0
13 TraesCS7B01G082600 chr7D 89.076 119 6 4 1075 1186 131823214 131823096 9.660000e-30 141.0
14 TraesCS7B01G082600 chr7D 93.103 87 6 0 2504 2590 131821809 131821723 7.520000e-26 128.0
15 TraesCS7B01G082600 chr7A 92.145 662 41 8 1399 2050 130614990 130614330 0.000000e+00 924.0
16 TraesCS7B01G082600 chr7A 87.260 573 63 6 1600 2167 131776444 131777011 0.000000e+00 645.0
17 TraesCS7B01G082600 chr7A 90.120 415 32 7 2022 2430 130614049 130613638 4.910000e-147 531.0
18 TraesCS7B01G082600 chr7A 87.423 326 31 8 2068 2385 130614215 130613892 1.460000e-97 366.0
19 TraesCS7B01G082600 chr7A 84.536 388 37 14 980 1359 130626376 130626004 1.890000e-96 363.0
20 TraesCS7B01G082600 chr7A 80.778 437 76 5 1397 1830 203697313 203697744 4.130000e-88 335.0
21 TraesCS7B01G082600 chr7A 93.827 81 5 0 2434 2514 310433875 310433795 3.500000e-24 122.0
22 TraesCS7B01G082600 chr7A 91.566 83 7 0 2432 2514 310433797 310433879 5.860000e-22 115.0
23 TraesCS7B01G082600 chr7A 88.421 95 5 1 2434 2522 680343963 680344057 2.720000e-20 110.0
24 TraesCS7B01G082600 chr7A 90.625 64 4 2 2529 2590 130613635 130613572 1.650000e-12 84.2
25 TraesCS7B01G082600 chr3B 93.400 500 33 0 445 944 572882888 572882389 0.000000e+00 741.0
26 TraesCS7B01G082600 chr3B 95.561 428 16 2 1 426 21767340 21767766 0.000000e+00 682.0
27 TraesCS7B01G082600 chr3B 91.566 83 7 0 2429 2511 465505712 465505794 5.860000e-22 115.0
28 TraesCS7B01G082600 chr6D 93.200 500 34 0 445 944 29167081 29166582 0.000000e+00 736.0
29 TraesCS7B01G082600 chr6D 93.014 501 35 0 444 944 67310271 67310771 0.000000e+00 732.0
30 TraesCS7B01G082600 chr1D 93.200 500 34 0 445 944 427335127 427334628 0.000000e+00 736.0
31 TraesCS7B01G082600 chr1D 88.421 95 6 2 2434 2525 487321511 487321419 2.720000e-20 110.0
32 TraesCS7B01G082600 chr1A 93.200 500 34 0 445 944 110054750 110055249 0.000000e+00 736.0
33 TraesCS7B01G082600 chr6B 93.000 500 35 0 445 944 563360071 563360570 0.000000e+00 730.0
34 TraesCS7B01G082600 chr6B 95.000 80 3 1 2432 2510 646277556 646277635 9.730000e-25 124.0
35 TraesCS7B01G082600 chr6B 93.827 81 4 1 2434 2513 646277635 646277555 1.260000e-23 121.0
36 TraesCS7B01G082600 chr5D 93.000 500 35 0 445 944 368697327 368697826 0.000000e+00 730.0
37 TraesCS7B01G082600 chr2D 93.000 500 35 0 445 944 304437838 304437339 0.000000e+00 730.0
38 TraesCS7B01G082600 chr2B 93.000 500 35 0 445 944 695454388 695453889 0.000000e+00 730.0
39 TraesCS7B01G082600 chr2B 95.327 428 18 1 1 426 655017640 655017213 0.000000e+00 678.0
40 TraesCS7B01G082600 chr2B 94.626 428 21 1 1 426 655019064 655019491 0.000000e+00 662.0
41 TraesCS7B01G082600 chr1B 96.495 428 13 1 1 426 623883047 623883474 0.000000e+00 706.0
42 TraesCS7B01G082600 chr1B 94.172 429 23 1 1 427 623881672 623881244 0.000000e+00 652.0
43 TraesCS7B01G082600 chr5B 95.814 430 16 1 1 428 662871256 662871685 0.000000e+00 693.0
44 TraesCS7B01G082600 chr5B 93.939 429 24 1 1 427 662869850 662869422 0.000000e+00 647.0
45 TraesCS7B01G082600 chr5B 95.110 409 18 1 1 407 622525570 622525978 0.000000e+00 643.0
46 TraesCS7B01G082600 chr5B 93.458 428 26 1 1 426 622524150 622523723 3.640000e-178 634.0
47 TraesCS7B01G082600 chr3A 92.593 81 4 2 2435 2515 40931788 40931866 5.860000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G082600 chr7B 93439705 93442294 2589 True 4783.0 4783 100.00000 1 2590 1 chr7B.!!$R1 2589
1 TraesCS7B01G082600 chr7B 94263826 94264997 1171 False 850.0 850 80.21400 980 2167 1 chr7B.!!$F2 1187
2 TraesCS7B01G082600 chr7D 133194153 133194839 686 False 695.0 695 85.10000 1463 2152 1 chr7D.!!$F1 689
3 TraesCS7B01G082600 chr7D 131821723 131823214 1491 True 519.0 1227 91.80150 1075 2590 4 chr7D.!!$R2 1515
4 TraesCS7B01G082600 chr7D 194129817 194130536 719 False 297.0 331 82.28850 1397 2165 2 chr7D.!!$F3 768
5 TraesCS7B01G082600 chr7D 132741563 132742268 705 False 268.5 324 80.74050 1397 2167 2 chr7D.!!$F2 770
6 TraesCS7B01G082600 chr7A 131776444 131777011 567 False 645.0 645 87.26000 1600 2167 1 chr7A.!!$F1 567
7 TraesCS7B01G082600 chr7A 130613572 130614990 1418 True 476.3 924 90.07825 1399 2590 4 chr7A.!!$R3 1191
8 TraesCS7B01G082600 chr6D 67310271 67310771 500 False 732.0 732 93.01400 444 944 1 chr6D.!!$F1 500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
355 356 0.108615 ACTCGAAATGGTCAGCTCGG 60.109 55.0 0.0 0.0 32.25 4.63 F
356 357 0.108615 CTCGAAATGGTCAGCTCGGT 60.109 55.0 0.0 0.0 32.25 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1378 1411 0.031178 AAGAGCGGCAAAAGCTGTTG 59.969 50.0 12.62 12.62 44.80 3.33 R
2007 2178 0.099613 CCACCAGTCGATCAGAGACG 59.900 60.0 0.00 0.00 42.97 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.836864 TCTGTCAGTTATATTATGATGCACTTT 57.163 29.630 0.00 0.00 0.00 2.66
45 46 7.712264 CACTTTTGCAATAAGGTTTTCATCA 57.288 32.000 18.96 0.00 0.00 3.07
46 47 8.140677 CACTTTTGCAATAAGGTTTTCATCAA 57.859 30.769 18.96 0.03 0.00 2.57
47 48 8.277713 CACTTTTGCAATAAGGTTTTCATCAAG 58.722 33.333 18.96 9.92 0.00 3.02
48 49 6.783892 TTTGCAATAAGGTTTTCATCAAGC 57.216 33.333 0.00 0.00 0.00 4.01
49 50 5.465532 TGCAATAAGGTTTTCATCAAGCA 57.534 34.783 0.00 0.00 0.00 3.91
50 51 5.851720 TGCAATAAGGTTTTCATCAAGCAA 58.148 33.333 0.00 0.00 0.00 3.91
51 52 6.286758 TGCAATAAGGTTTTCATCAAGCAAA 58.713 32.000 0.00 0.00 0.00 3.68
52 53 6.935771 TGCAATAAGGTTTTCATCAAGCAAAT 59.064 30.769 0.00 0.00 0.00 2.32
53 54 7.444792 TGCAATAAGGTTTTCATCAAGCAAATT 59.555 29.630 0.00 0.00 0.00 1.82
54 55 7.747357 GCAATAAGGTTTTCATCAAGCAAATTG 59.253 33.333 0.00 0.00 40.52 2.32
68 69 8.985315 TCAAGCAAATTGATCCTAACATAGAT 57.015 30.769 0.00 0.00 43.09 1.98
69 70 8.843262 TCAAGCAAATTGATCCTAACATAGATG 58.157 33.333 0.00 0.00 43.09 2.90
70 71 8.843262 CAAGCAAATTGATCCTAACATAGATGA 58.157 33.333 0.00 0.00 41.83 2.92
71 72 8.985315 AGCAAATTGATCCTAACATAGATGAA 57.015 30.769 0.00 0.00 0.00 2.57
72 73 9.412460 AGCAAATTGATCCTAACATAGATGAAA 57.588 29.630 0.00 0.00 0.00 2.69
77 78 7.750229 TGATCCTAACATAGATGAAAATGCC 57.250 36.000 0.00 0.00 0.00 4.40
78 79 7.289310 TGATCCTAACATAGATGAAAATGCCA 58.711 34.615 0.00 0.00 0.00 4.92
79 80 6.942532 TCCTAACATAGATGAAAATGCCAC 57.057 37.500 0.00 0.00 0.00 5.01
80 81 5.827797 TCCTAACATAGATGAAAATGCCACC 59.172 40.000 0.00 0.00 0.00 4.61
81 82 5.593909 CCTAACATAGATGAAAATGCCACCA 59.406 40.000 0.00 0.00 0.00 4.17
82 83 6.266103 CCTAACATAGATGAAAATGCCACCAT 59.734 38.462 0.00 0.00 0.00 3.55
83 84 6.549433 AACATAGATGAAAATGCCACCATT 57.451 33.333 0.00 0.00 43.32 3.16
84 85 5.909477 ACATAGATGAAAATGCCACCATTG 58.091 37.500 0.00 0.00 40.69 2.82
85 86 3.255969 AGATGAAAATGCCACCATTGC 57.744 42.857 0.00 0.00 40.69 3.56
86 87 1.928503 GATGAAAATGCCACCATTGCG 59.071 47.619 0.00 0.00 40.69 4.85
87 88 0.678395 TGAAAATGCCACCATTGCGT 59.322 45.000 0.00 0.00 40.69 5.24
88 89 1.889170 TGAAAATGCCACCATTGCGTA 59.111 42.857 0.00 0.00 40.69 4.42
89 90 2.094803 TGAAAATGCCACCATTGCGTAG 60.095 45.455 0.00 0.00 40.69 3.51
90 91 1.832883 AAATGCCACCATTGCGTAGA 58.167 45.000 0.00 0.00 40.69 2.59
91 92 1.832883 AATGCCACCATTGCGTAGAA 58.167 45.000 0.00 0.00 40.09 2.10
92 93 1.094785 ATGCCACCATTGCGTAGAAC 58.905 50.000 0.00 0.00 0.00 3.01
93 94 0.250510 TGCCACCATTGCGTAGAACA 60.251 50.000 0.00 0.00 0.00 3.18
94 95 0.168128 GCCACCATTGCGTAGAACAC 59.832 55.000 0.00 0.00 0.00 3.32
114 115 8.842280 AGAACACGGAAAAATATACAACTTTCA 58.158 29.630 0.00 0.00 30.89 2.69
115 116 9.620660 GAACACGGAAAAATATACAACTTTCAT 57.379 29.630 0.00 0.00 30.89 2.57
139 140 1.474077 AGGCACTTTTTCATCGGATGC 59.526 47.619 13.15 0.24 27.25 3.91
140 141 1.202114 GGCACTTTTTCATCGGATGCA 59.798 47.619 13.15 0.00 33.24 3.96
141 142 2.253603 GCACTTTTTCATCGGATGCAC 58.746 47.619 13.15 0.00 0.00 4.57
142 143 2.508867 CACTTTTTCATCGGATGCACG 58.491 47.619 13.15 0.00 0.00 5.34
143 144 1.468520 ACTTTTTCATCGGATGCACGG 59.531 47.619 13.15 5.03 0.00 4.94
144 145 1.737236 CTTTTTCATCGGATGCACGGA 59.263 47.619 13.15 0.00 0.00 4.69
145 146 2.036958 TTTTCATCGGATGCACGGAT 57.963 45.000 13.15 0.00 38.74 4.18
146 147 2.036958 TTTCATCGGATGCACGGATT 57.963 45.000 13.15 0.00 36.62 3.01
147 148 2.900716 TTCATCGGATGCACGGATTA 57.099 45.000 13.15 0.00 36.62 1.75
148 149 2.900716 TCATCGGATGCACGGATTAA 57.099 45.000 13.15 0.00 36.62 1.40
149 150 3.186702 TCATCGGATGCACGGATTAAA 57.813 42.857 13.15 0.00 36.62 1.52
150 151 3.536570 TCATCGGATGCACGGATTAAAA 58.463 40.909 13.15 0.00 36.62 1.52
151 152 3.559655 TCATCGGATGCACGGATTAAAAG 59.440 43.478 13.15 0.00 36.62 2.27
152 153 2.980568 TCGGATGCACGGATTAAAAGT 58.019 42.857 0.00 0.00 0.00 2.66
153 154 3.340034 TCGGATGCACGGATTAAAAGTT 58.660 40.909 0.00 0.00 0.00 2.66
154 155 4.505808 TCGGATGCACGGATTAAAAGTTA 58.494 39.130 0.00 0.00 0.00 2.24
155 156 4.330620 TCGGATGCACGGATTAAAAGTTAC 59.669 41.667 0.00 0.00 0.00 2.50
156 157 4.093703 CGGATGCACGGATTAAAAGTTACA 59.906 41.667 0.00 0.00 0.00 2.41
157 158 5.391097 CGGATGCACGGATTAAAAGTTACAA 60.391 40.000 0.00 0.00 0.00 2.41
158 159 6.560711 GGATGCACGGATTAAAAGTTACAAT 58.439 36.000 0.00 0.00 0.00 2.71
159 160 7.466185 CGGATGCACGGATTAAAAGTTACAATA 60.466 37.037 0.00 0.00 0.00 1.90
160 161 7.855904 GGATGCACGGATTAAAAGTTACAATAG 59.144 37.037 0.00 0.00 0.00 1.73
161 162 7.675962 TGCACGGATTAAAAGTTACAATAGT 57.324 32.000 0.00 0.00 0.00 2.12
162 163 8.101654 TGCACGGATTAAAAGTTACAATAGTT 57.898 30.769 0.00 0.00 0.00 2.24
163 164 8.569641 TGCACGGATTAAAAGTTACAATAGTTT 58.430 29.630 0.00 0.00 0.00 2.66
164 165 9.401873 GCACGGATTAAAAGTTACAATAGTTTT 57.598 29.630 0.00 0.00 35.45 2.43
196 197 1.804748 GTGCAACTCCTTTCGGTTAGG 59.195 52.381 0.00 0.00 0.00 2.69
197 198 0.803117 GCAACTCCTTTCGGTTAGGC 59.197 55.000 0.00 0.00 32.59 3.93
198 199 1.076332 CAACTCCTTTCGGTTAGGCG 58.924 55.000 0.00 0.00 32.59 5.52
199 200 0.672711 AACTCCTTTCGGTTAGGCGC 60.673 55.000 0.00 0.00 32.59 6.53
200 201 1.218316 CTCCTTTCGGTTAGGCGCT 59.782 57.895 7.64 0.00 32.59 5.92
201 202 1.079405 TCCTTTCGGTTAGGCGCTG 60.079 57.895 7.64 0.00 32.59 5.18
202 203 2.750888 CCTTTCGGTTAGGCGCTGC 61.751 63.158 7.64 0.00 0.00 5.25
203 204 2.031314 TTTCGGTTAGGCGCTGCA 59.969 55.556 7.64 0.00 0.00 4.41
204 205 2.240612 CTTTCGGTTAGGCGCTGCAC 62.241 60.000 7.64 0.55 0.00 4.57
205 206 2.725203 TTTCGGTTAGGCGCTGCACT 62.725 55.000 7.64 0.00 0.00 4.40
206 207 1.879737 TTCGGTTAGGCGCTGCACTA 61.880 55.000 7.64 0.00 0.00 2.74
207 208 2.165301 CGGTTAGGCGCTGCACTAC 61.165 63.158 7.64 0.00 0.00 2.73
208 209 1.079405 GGTTAGGCGCTGCACTACA 60.079 57.895 7.64 0.00 0.00 2.74
209 210 0.462047 GGTTAGGCGCTGCACTACAT 60.462 55.000 7.64 0.00 0.00 2.29
210 211 1.369625 GTTAGGCGCTGCACTACATT 58.630 50.000 7.64 0.00 0.00 2.71
211 212 1.062587 GTTAGGCGCTGCACTACATTG 59.937 52.381 7.64 0.00 0.00 2.82
212 213 0.249120 TAGGCGCTGCACTACATTGT 59.751 50.000 7.64 0.00 0.00 2.71
213 214 1.135315 GGCGCTGCACTACATTGTG 59.865 57.895 7.64 0.00 40.62 3.33
223 224 4.836125 CACTACATTGTGCAACTCCTTT 57.164 40.909 0.00 0.00 38.04 3.11
224 225 4.787598 CACTACATTGTGCAACTCCTTTC 58.212 43.478 0.00 0.00 38.04 2.62
225 226 4.275689 CACTACATTGTGCAACTCCTTTCA 59.724 41.667 0.00 0.00 38.04 2.69
226 227 3.996150 ACATTGTGCAACTCCTTTCAG 57.004 42.857 0.00 0.00 38.04 3.02
227 228 2.035066 ACATTGTGCAACTCCTTTCAGC 59.965 45.455 0.00 0.00 38.04 4.26
228 229 2.057137 TTGTGCAACTCCTTTCAGCT 57.943 45.000 0.00 0.00 38.04 4.24
229 230 2.928801 TGTGCAACTCCTTTCAGCTA 57.071 45.000 0.00 0.00 38.04 3.32
230 231 2.771089 TGTGCAACTCCTTTCAGCTAG 58.229 47.619 0.00 0.00 38.04 3.42
231 232 2.079925 GTGCAACTCCTTTCAGCTAGG 58.920 52.381 0.00 0.00 0.00 3.02
232 233 1.090728 GCAACTCCTTTCAGCTAGGC 58.909 55.000 0.00 0.00 32.59 3.93
233 234 1.363744 CAACTCCTTTCAGCTAGGCG 58.636 55.000 0.00 0.00 32.59 5.52
234 235 0.391793 AACTCCTTTCAGCTAGGCGC 60.392 55.000 0.00 0.00 39.57 6.53
243 244 3.804193 GCTAGGCGCTGCACAACC 61.804 66.667 7.64 0.00 35.14 3.77
244 245 2.358615 CTAGGCGCTGCACAACCA 60.359 61.111 7.64 0.00 0.00 3.67
245 246 2.358615 TAGGCGCTGCACAACCAG 60.359 61.111 7.64 0.00 35.93 4.00
246 247 3.899981 TAGGCGCTGCACAACCAGG 62.900 63.158 7.64 0.00 33.44 4.45
248 249 3.730761 GCGCTGCACAACCAGGAG 61.731 66.667 0.00 0.00 33.44 3.69
249 250 2.281070 CGCTGCACAACCAGGAGT 60.281 61.111 0.00 0.00 33.44 3.85
250 251 2.610694 CGCTGCACAACCAGGAGTG 61.611 63.158 11.14 11.14 38.74 3.51
272 273 4.738998 CCGGGCTGCCATGTTGGA 62.739 66.667 22.05 0.00 40.96 3.53
273 274 3.443045 CGGGCTGCCATGTTGGAC 61.443 66.667 22.05 0.00 40.96 4.02
274 275 2.283101 GGGCTGCCATGTTGGACA 60.283 61.111 22.05 0.00 40.96 4.02
275 276 2.345760 GGGCTGCCATGTTGGACAG 61.346 63.158 22.05 11.31 40.96 3.51
276 277 2.345760 GGCTGCCATGTTGGACAGG 61.346 63.158 15.17 0.00 40.96 4.00
277 278 2.998279 GCTGCCATGTTGGACAGGC 61.998 63.158 15.13 10.72 40.96 4.85
278 279 2.672651 TGCCATGTTGGACAGGCG 60.673 61.111 13.14 0.00 41.85 5.52
279 280 2.672996 GCCATGTTGGACAGGCGT 60.673 61.111 0.00 0.00 40.96 5.68
280 281 2.981560 GCCATGTTGGACAGGCGTG 61.982 63.158 4.53 4.53 40.96 5.34
281 282 1.600636 CCATGTTGGACAGGCGTGT 60.601 57.895 12.68 12.68 40.96 4.49
282 283 1.575922 CATGTTGGACAGGCGTGTG 59.424 57.895 18.18 0.00 36.88 3.82
283 284 1.600636 ATGTTGGACAGGCGTGTGG 60.601 57.895 18.18 0.00 36.88 4.17
284 285 3.660111 GTTGGACAGGCGTGTGGC 61.660 66.667 18.18 3.04 36.88 5.01
294 295 3.188786 CGTGTGGCGCCTAAGCTC 61.189 66.667 29.70 14.15 36.60 4.09
295 296 2.820037 GTGTGGCGCCTAAGCTCC 60.820 66.667 29.70 6.99 44.63 4.70
296 297 3.003173 TGTGGCGCCTAAGCTCCT 61.003 61.111 29.70 0.00 44.67 3.69
297 298 2.512515 GTGGCGCCTAAGCTCCTG 60.513 66.667 29.70 0.00 44.67 3.86
298 299 2.683572 TGGCGCCTAAGCTCCTGA 60.684 61.111 29.70 0.00 44.67 3.86
299 300 2.202946 GGCGCCTAAGCTCCTGAC 60.203 66.667 22.15 0.00 40.94 3.51
300 301 2.583593 GCGCCTAAGCTCCTGACG 60.584 66.667 0.00 0.00 36.60 4.35
301 302 2.583593 CGCCTAAGCTCCTGACGC 60.584 66.667 0.00 0.00 36.60 5.19
302 303 2.896443 GCCTAAGCTCCTGACGCT 59.104 61.111 0.00 0.00 39.94 5.07
303 304 1.520342 GCCTAAGCTCCTGACGCTG 60.520 63.158 0.00 0.00 37.87 5.18
304 305 1.520342 CCTAAGCTCCTGACGCTGC 60.520 63.158 0.00 0.00 37.87 5.25
305 306 1.216444 CTAAGCTCCTGACGCTGCA 59.784 57.895 0.00 0.00 37.87 4.41
306 307 0.805322 CTAAGCTCCTGACGCTGCAG 60.805 60.000 10.11 10.11 37.87 4.41
307 308 1.536073 TAAGCTCCTGACGCTGCAGT 61.536 55.000 16.64 0.00 37.87 4.40
308 309 1.536073 AAGCTCCTGACGCTGCAGTA 61.536 55.000 16.64 0.00 37.87 2.74
309 310 1.142748 GCTCCTGACGCTGCAGTAT 59.857 57.895 16.64 3.21 34.06 2.12
310 311 0.385751 GCTCCTGACGCTGCAGTATA 59.614 55.000 16.64 0.00 34.06 1.47
311 312 1.601663 GCTCCTGACGCTGCAGTATAG 60.602 57.143 16.64 8.77 34.06 1.31
312 313 1.678627 CTCCTGACGCTGCAGTATAGT 59.321 52.381 16.64 10.55 34.06 2.12
313 314 1.405463 TCCTGACGCTGCAGTATAGTG 59.595 52.381 16.64 2.97 34.06 2.74
314 315 1.135139 CCTGACGCTGCAGTATAGTGT 59.865 52.381 16.64 1.63 41.24 3.55
315 316 2.188524 CTGACGCTGCAGTATAGTGTG 58.811 52.381 16.64 0.00 38.86 3.82
316 317 1.135112 TGACGCTGCAGTATAGTGTGG 60.135 52.381 16.64 3.99 38.86 4.17
317 318 0.460284 ACGCTGCAGTATAGTGTGGC 60.460 55.000 16.64 11.67 37.49 5.01
318 319 1.482621 CGCTGCAGTATAGTGTGGCG 61.483 60.000 23.61 23.61 35.52 5.69
319 320 1.766143 GCTGCAGTATAGTGTGGCGC 61.766 60.000 16.64 0.00 0.00 6.53
320 321 1.153449 TGCAGTATAGTGTGGCGCC 60.153 57.895 22.73 22.73 0.00 6.53
321 322 1.144057 GCAGTATAGTGTGGCGCCT 59.856 57.895 29.70 9.99 0.00 5.52
322 323 0.387929 GCAGTATAGTGTGGCGCCTA 59.612 55.000 29.70 14.39 0.00 3.93
323 324 1.000955 GCAGTATAGTGTGGCGCCTAT 59.999 52.381 29.70 18.85 0.00 2.57
324 325 2.927014 GCAGTATAGTGTGGCGCCTATC 60.927 54.545 29.70 17.99 0.00 2.08
325 326 2.558795 CAGTATAGTGTGGCGCCTATCT 59.441 50.000 29.70 22.70 0.00 1.98
326 327 2.558795 AGTATAGTGTGGCGCCTATCTG 59.441 50.000 29.70 0.00 0.00 2.90
327 328 1.414158 ATAGTGTGGCGCCTATCTGT 58.586 50.000 29.70 16.97 0.00 3.41
328 329 0.744874 TAGTGTGGCGCCTATCTGTC 59.255 55.000 29.70 10.72 0.00 3.51
329 330 1.878522 GTGTGGCGCCTATCTGTCG 60.879 63.158 29.70 0.00 0.00 4.35
330 331 2.279517 GTGGCGCCTATCTGTCGG 60.280 66.667 29.70 0.00 0.00 4.79
331 332 3.536917 TGGCGCCTATCTGTCGGG 61.537 66.667 29.70 0.00 0.00 5.14
332 333 4.971125 GGCGCCTATCTGTCGGGC 62.971 72.222 22.15 0.00 42.18 6.13
335 336 4.971125 GCCTATCTGTCGGGCGCC 62.971 72.222 21.18 21.18 36.37 6.53
336 337 3.536917 CCTATCTGTCGGGCGCCA 61.537 66.667 30.85 5.28 0.00 5.69
337 338 2.279517 CTATCTGTCGGGCGCCAC 60.280 66.667 30.85 19.79 0.00 5.01
338 339 2.758327 TATCTGTCGGGCGCCACT 60.758 61.111 30.85 5.56 0.00 4.00
339 340 2.685387 CTATCTGTCGGGCGCCACTC 62.685 65.000 30.85 17.36 0.00 3.51
344 345 4.077184 TCGGGCGCCACTCGAAAT 62.077 61.111 30.85 0.00 41.67 2.17
345 346 3.864686 CGGGCGCCACTCGAAATG 61.865 66.667 30.85 1.52 41.67 2.32
346 347 3.508840 GGGCGCCACTCGAAATGG 61.509 66.667 30.85 10.45 41.67 3.16
347 348 2.746277 GGCGCCACTCGAAATGGT 60.746 61.111 24.80 0.00 41.67 3.55
348 349 2.750888 GGCGCCACTCGAAATGGTC 61.751 63.158 24.80 8.53 41.67 4.02
349 350 2.032634 GCGCCACTCGAAATGGTCA 61.033 57.895 15.06 0.00 41.67 4.02
350 351 1.970917 GCGCCACTCGAAATGGTCAG 61.971 60.000 15.06 9.22 41.67 3.51
351 352 1.796796 GCCACTCGAAATGGTCAGC 59.203 57.895 15.06 0.00 39.63 4.26
352 353 0.674895 GCCACTCGAAATGGTCAGCT 60.675 55.000 15.06 0.00 39.63 4.24
353 354 1.363744 CCACTCGAAATGGTCAGCTC 58.636 55.000 7.14 0.00 32.08 4.09
354 355 0.994995 CACTCGAAATGGTCAGCTCG 59.005 55.000 0.00 0.00 0.00 5.03
355 356 0.108615 ACTCGAAATGGTCAGCTCGG 60.109 55.000 0.00 0.00 32.25 4.63
356 357 0.108615 CTCGAAATGGTCAGCTCGGT 60.109 55.000 0.00 0.00 32.25 4.69
357 358 0.389817 TCGAAATGGTCAGCTCGGTG 60.390 55.000 0.00 0.00 32.25 4.94
358 359 1.796796 GAAATGGTCAGCTCGGTGC 59.203 57.895 0.00 0.00 43.29 5.01
359 360 0.955428 GAAATGGTCAGCTCGGTGCA 60.955 55.000 4.74 0.00 45.94 4.57
360 361 0.537143 AAATGGTCAGCTCGGTGCAA 60.537 50.000 4.74 0.00 45.94 4.08
361 362 0.322816 AATGGTCAGCTCGGTGCAAT 60.323 50.000 4.74 0.00 45.94 3.56
362 363 0.322816 ATGGTCAGCTCGGTGCAATT 60.323 50.000 4.74 0.00 45.94 2.32
363 364 0.537143 TGGTCAGCTCGGTGCAATTT 60.537 50.000 4.74 0.00 45.94 1.82
364 365 0.598065 GGTCAGCTCGGTGCAATTTT 59.402 50.000 4.74 0.00 45.94 1.82
365 366 1.000274 GGTCAGCTCGGTGCAATTTTT 60.000 47.619 4.74 0.00 45.94 1.94
387 388 7.795482 TTTTCGAAAGGAGTTTAGATTGTGA 57.205 32.000 10.98 0.00 28.72 3.58
388 389 7.795482 TTTCGAAAGGAGTTTAGATTGTGAA 57.205 32.000 6.47 0.00 28.72 3.18
389 390 7.979444 TTCGAAAGGAGTTTAGATTGTGAAT 57.021 32.000 0.00 0.00 28.72 2.57
390 391 7.979444 TCGAAAGGAGTTTAGATTGTGAATT 57.021 32.000 0.00 0.00 0.00 2.17
391 392 8.029642 TCGAAAGGAGTTTAGATTGTGAATTC 57.970 34.615 0.00 0.00 0.00 2.17
392 393 7.878127 TCGAAAGGAGTTTAGATTGTGAATTCT 59.122 33.333 7.05 0.00 0.00 2.40
393 394 8.507249 CGAAAGGAGTTTAGATTGTGAATTCTT 58.493 33.333 7.05 0.00 0.00 2.52
397 398 9.971922 AGGAGTTTAGATTGTGAATTCTTTTTG 57.028 29.630 7.05 0.00 0.00 2.44
398 399 9.750125 GGAGTTTAGATTGTGAATTCTTTTTGT 57.250 29.630 7.05 0.00 0.00 2.83
400 401 9.750125 AGTTTAGATTGTGAATTCTTTTTGTCC 57.250 29.630 7.05 0.00 0.00 4.02
401 402 9.750125 GTTTAGATTGTGAATTCTTTTTGTCCT 57.250 29.630 7.05 0.00 0.00 3.85
405 406 8.579863 AGATTGTGAATTCTTTTTGTCCTTAGG 58.420 33.333 7.05 0.00 0.00 2.69
406 407 7.654022 TTGTGAATTCTTTTTGTCCTTAGGT 57.346 32.000 7.05 0.00 0.00 3.08
407 408 7.272037 TGTGAATTCTTTTTGTCCTTAGGTC 57.728 36.000 7.05 0.00 0.00 3.85
408 409 6.831353 TGTGAATTCTTTTTGTCCTTAGGTCA 59.169 34.615 7.05 0.00 0.00 4.02
409 410 7.340743 TGTGAATTCTTTTTGTCCTTAGGTCAA 59.659 33.333 6.84 6.84 0.00 3.18
410 411 8.194769 GTGAATTCTTTTTGTCCTTAGGTCAAA 58.805 33.333 17.19 17.19 38.50 2.69
411 412 8.923270 TGAATTCTTTTTGTCCTTAGGTCAAAT 58.077 29.630 20.58 8.01 39.54 2.32
415 416 8.934023 TCTTTTTGTCCTTAGGTCAAATATGT 57.066 30.769 20.58 0.00 39.54 2.29
416 417 8.792633 TCTTTTTGTCCTTAGGTCAAATATGTG 58.207 33.333 20.58 11.31 39.54 3.21
417 418 8.472007 TTTTTGTCCTTAGGTCAAATATGTGT 57.528 30.769 20.58 0.00 39.54 3.72
418 419 8.472007 TTTTGTCCTTAGGTCAAATATGTGTT 57.528 30.769 20.58 0.00 39.54 3.32
419 420 8.472007 TTTGTCCTTAGGTCAAATATGTGTTT 57.528 30.769 17.19 0.00 36.24 2.83
420 421 8.472007 TTGTCCTTAGGTCAAATATGTGTTTT 57.528 30.769 8.40 0.00 28.82 2.43
421 422 8.472007 TGTCCTTAGGTCAAATATGTGTTTTT 57.528 30.769 0.00 0.00 0.00 1.94
487 488 5.721232 ACGAAGATCTTTATCGGTCAAACT 58.279 37.500 17.21 0.00 40.71 2.66
497 498 4.685169 ATCGGTCAAACTGCATAACAAG 57.315 40.909 0.00 0.00 0.00 3.16
520 521 5.888161 AGATACATTGTTCCCTTTGTCATCC 59.112 40.000 0.00 0.00 0.00 3.51
557 558 3.120615 CGAGATTCGATCGTCGGTATCTT 60.121 47.826 15.94 2.95 43.74 2.40
602 603 3.366679 CCGGCAAGTCTCTTTACTCGTTA 60.367 47.826 0.00 0.00 0.00 3.18
604 605 4.265556 CGGCAAGTCTCTTTACTCGTTATG 59.734 45.833 0.00 0.00 0.00 1.90
605 606 4.033014 GGCAAGTCTCTTTACTCGTTATGC 59.967 45.833 0.00 0.00 30.78 3.14
671 672 7.000472 ACAAGGCTTATAGTGATGTGCATTAT 59.000 34.615 0.00 0.00 34.30 1.28
682 683 0.946221 GTGCATTATCGAGAGGGCCG 60.946 60.000 0.00 0.00 0.00 6.13
684 685 0.667792 GCATTATCGAGAGGGCCGAC 60.668 60.000 0.00 0.00 38.97 4.79
697 698 0.755698 GGCCGACAGATACCTCTCCA 60.756 60.000 0.00 0.00 0.00 3.86
712 713 2.751166 CTCCAACAATCGGAGTGACT 57.249 50.000 12.93 0.00 44.35 3.41
724 725 7.070074 ACAATCGGAGTGACTAATCCTAATCTT 59.930 37.037 12.93 0.00 38.90 2.40
733 734 9.530633 GTGACTAATCCTAATCTTGAAATACGT 57.469 33.333 0.00 0.00 0.00 3.57
753 754 4.116961 CGTCAACTCAACAAGTACCTTCA 58.883 43.478 0.00 0.00 37.17 3.02
756 757 5.815740 GTCAACTCAACAAGTACCTTCAGAA 59.184 40.000 0.00 0.00 37.17 3.02
785 786 6.183361 CCTGTAGAGCACCTTTATAATCACCT 60.183 42.308 0.00 0.00 0.00 4.00
786 787 6.817184 TGTAGAGCACCTTTATAATCACCTC 58.183 40.000 0.00 0.00 0.00 3.85
799 800 3.587797 ATCACCTCGTTACGTTGTGAT 57.412 42.857 25.91 25.91 40.79 3.06
817 818 4.158579 TGTGATGTTTGGTAGCACACAAAA 59.841 37.500 17.00 6.55 38.20 2.44
825 826 3.957497 TGGTAGCACACAAAATGTTCCTT 59.043 39.130 0.00 0.00 40.64 3.36
827 828 3.733443 AGCACACAAAATGTTCCTTCC 57.267 42.857 0.00 0.00 40.64 3.46
828 829 3.030291 AGCACACAAAATGTTCCTTCCA 58.970 40.909 0.00 0.00 40.64 3.53
853 854 3.470709 ACGGGAGTTGCATAATCTCATG 58.529 45.455 0.00 0.00 43.33 3.07
860 861 6.712095 GGAGTTGCATAATCTCATGGTCATAA 59.288 38.462 0.00 0.00 0.00 1.90
861 862 7.229306 GGAGTTGCATAATCTCATGGTCATAAA 59.771 37.037 0.00 0.00 0.00 1.40
905 906 8.335532 AGAAAGCAATAGCAACATACTAAACA 57.664 30.769 0.00 0.00 45.49 2.83
911 912 9.520204 GCAATAGCAACATACTAAACAATCAAT 57.480 29.630 0.00 0.00 41.58 2.57
930 931 8.551205 CAATCAATTGCTAAGCTAATAGAACGA 58.449 33.333 0.00 0.00 0.00 3.85
944 945 7.436673 GCTAATAGAACGAGTCAAGTCAATCAT 59.563 37.037 0.00 0.00 0.00 2.45
945 946 9.307121 CTAATAGAACGAGTCAAGTCAATCATT 57.693 33.333 0.00 0.00 0.00 2.57
946 947 8.553459 AATAGAACGAGTCAAGTCAATCATTT 57.447 30.769 0.00 0.00 0.00 2.32
947 948 6.473397 AGAACGAGTCAAGTCAATCATTTC 57.527 37.500 0.00 0.00 0.00 2.17
948 949 4.910746 ACGAGTCAAGTCAATCATTTCG 57.089 40.909 0.00 0.00 0.00 3.46
949 950 3.123621 ACGAGTCAAGTCAATCATTTCGC 59.876 43.478 0.00 0.00 0.00 4.70
950 951 3.123453 CGAGTCAAGTCAATCATTTCGCA 59.877 43.478 0.00 0.00 0.00 5.10
951 952 4.398247 GAGTCAAGTCAATCATTTCGCAC 58.602 43.478 0.00 0.00 0.00 5.34
952 953 3.189287 AGTCAAGTCAATCATTTCGCACC 59.811 43.478 0.00 0.00 0.00 5.01
953 954 2.487762 TCAAGTCAATCATTTCGCACCC 59.512 45.455 0.00 0.00 0.00 4.61
954 955 1.463674 AGTCAATCATTTCGCACCCC 58.536 50.000 0.00 0.00 0.00 4.95
955 956 0.455815 GTCAATCATTTCGCACCCCC 59.544 55.000 0.00 0.00 0.00 5.40
956 957 0.331278 TCAATCATTTCGCACCCCCT 59.669 50.000 0.00 0.00 0.00 4.79
957 958 0.740737 CAATCATTTCGCACCCCCTC 59.259 55.000 0.00 0.00 0.00 4.30
958 959 0.395724 AATCATTTCGCACCCCCTCC 60.396 55.000 0.00 0.00 0.00 4.30
959 960 1.570857 ATCATTTCGCACCCCCTCCA 61.571 55.000 0.00 0.00 0.00 3.86
960 961 2.046285 CATTTCGCACCCCCTCCAC 61.046 63.158 0.00 0.00 0.00 4.02
961 962 3.282374 ATTTCGCACCCCCTCCACC 62.282 63.158 0.00 0.00 0.00 4.61
965 966 3.256960 GCACCCCCTCCACCAGAA 61.257 66.667 0.00 0.00 0.00 3.02
966 967 2.616458 GCACCCCCTCCACCAGAAT 61.616 63.158 0.00 0.00 0.00 2.40
967 968 1.609783 CACCCCCTCCACCAGAATC 59.390 63.158 0.00 0.00 0.00 2.52
968 969 1.619669 ACCCCCTCCACCAGAATCC 60.620 63.158 0.00 0.00 0.00 3.01
969 970 1.619363 CCCCCTCCACCAGAATCCA 60.619 63.158 0.00 0.00 0.00 3.41
970 971 1.214305 CCCCCTCCACCAGAATCCAA 61.214 60.000 0.00 0.00 0.00 3.53
971 972 0.704076 CCCCTCCACCAGAATCCAAA 59.296 55.000 0.00 0.00 0.00 3.28
972 973 1.077005 CCCCTCCACCAGAATCCAAAA 59.923 52.381 0.00 0.00 0.00 2.44
973 974 2.292455 CCCCTCCACCAGAATCCAAAAT 60.292 50.000 0.00 0.00 0.00 1.82
974 975 3.026694 CCCTCCACCAGAATCCAAAATC 58.973 50.000 0.00 0.00 0.00 2.17
975 976 3.564133 CCCTCCACCAGAATCCAAAATCA 60.564 47.826 0.00 0.00 0.00 2.57
976 977 3.445096 CCTCCACCAGAATCCAAAATCAC 59.555 47.826 0.00 0.00 0.00 3.06
977 978 4.081406 CTCCACCAGAATCCAAAATCACA 58.919 43.478 0.00 0.00 0.00 3.58
978 979 4.081406 TCCACCAGAATCCAAAATCACAG 58.919 43.478 0.00 0.00 0.00 3.66
985 986 5.585445 CAGAATCCAAAATCACAGGAGAGAG 59.415 44.000 0.00 0.00 34.40 3.20
987 988 2.573462 TCCAAAATCACAGGAGAGAGGG 59.427 50.000 0.00 0.00 0.00 4.30
993 994 0.396974 CACAGGAGAGAGGGGAGAGG 60.397 65.000 0.00 0.00 0.00 3.69
995 996 1.087725 AGGAGAGAGGGGAGAGGGA 59.912 63.158 0.00 0.00 0.00 4.20
1022 1023 4.302509 TTCCGCCGTCGCTTCCAA 62.303 61.111 0.00 0.00 0.00 3.53
1063 1064 3.494336 CCAAGAAGCTGCTCGCCG 61.494 66.667 1.00 0.00 40.39 6.46
1104 1105 4.452733 GTGGCCTTCTACGCGCCT 62.453 66.667 5.73 0.00 43.42 5.52
1187 1216 3.785499 CGACGACGACTCCAGCGA 61.785 66.667 0.00 0.00 42.66 4.93
1204 1233 3.384014 GACAGCGAGGACGAGGACG 62.384 68.421 0.00 0.00 42.66 4.79
1326 1359 1.374252 TTCCTTCTCTGCGTTCGCC 60.374 57.895 14.44 0.00 0.00 5.54
1364 1397 3.721087 AATCGGGGTTCTGATTCAAGT 57.279 42.857 0.00 0.00 43.46 3.16
1365 1398 3.721087 ATCGGGGTTCTGATTCAAGTT 57.279 42.857 0.00 0.00 35.57 2.66
1366 1399 2.778299 TCGGGGTTCTGATTCAAGTTG 58.222 47.619 0.00 0.00 0.00 3.16
1367 1400 2.370519 TCGGGGTTCTGATTCAAGTTGA 59.629 45.455 0.08 0.08 0.00 3.18
1368 1401 2.744202 CGGGGTTCTGATTCAAGTTGAG 59.256 50.000 5.56 0.00 0.00 3.02
1369 1402 3.756117 GGGGTTCTGATTCAAGTTGAGT 58.244 45.455 5.56 2.68 0.00 3.41
1370 1403 4.145052 GGGGTTCTGATTCAAGTTGAGTT 58.855 43.478 5.56 0.00 0.00 3.01
1371 1404 4.216472 GGGGTTCTGATTCAAGTTGAGTTC 59.784 45.833 5.56 8.09 0.00 3.01
1372 1405 5.066593 GGGTTCTGATTCAAGTTGAGTTCT 58.933 41.667 5.56 0.00 0.00 3.01
1373 1406 5.049129 GGGTTCTGATTCAAGTTGAGTTCTG 60.049 44.000 5.56 10.90 0.00 3.02
1374 1407 5.760253 GGTTCTGATTCAAGTTGAGTTCTGA 59.240 40.000 16.60 16.60 0.00 3.27
1375 1408 6.429385 GGTTCTGATTCAAGTTGAGTTCTGAT 59.571 38.462 19.13 6.71 0.00 2.90
1376 1409 7.360776 GGTTCTGATTCAAGTTGAGTTCTGATC 60.361 40.741 19.13 17.97 0.00 2.92
1377 1410 6.762333 TCTGATTCAAGTTGAGTTCTGATCA 58.238 36.000 16.60 14.80 0.00 2.92
1378 1411 6.648310 TCTGATTCAAGTTGAGTTCTGATCAC 59.352 38.462 16.60 0.33 0.00 3.06
1379 1412 6.290605 TGATTCAAGTTGAGTTCTGATCACA 58.709 36.000 5.56 0.00 0.00 3.58
1380 1413 6.767423 TGATTCAAGTTGAGTTCTGATCACAA 59.233 34.615 5.56 0.00 0.00 3.33
1389 1431 5.179045 AGTTCTGATCACAACAGCTTTTG 57.821 39.130 15.12 11.05 35.61 2.44
1409 1451 0.531532 CCGCTCTTGATTCCGCAGAT 60.532 55.000 0.00 0.00 0.00 2.90
1838 1951 1.858372 GATCGAGTAGGGAGGCGAGC 61.858 65.000 0.00 0.00 36.12 5.03
1859 1972 3.738281 GCCGAGTAGTCGTAGTGGTAGTA 60.738 52.174 18.23 0.00 45.30 1.82
1860 1973 4.047822 CCGAGTAGTCGTAGTGGTAGTAG 58.952 52.174 18.23 0.00 45.30 2.57
1861 1974 3.489047 CGAGTAGTCGTAGTGGTAGTAGC 59.511 52.174 11.92 0.00 41.57 3.58
1953 2124 1.344438 AGAGACGCCTTGTTGATGTGA 59.656 47.619 0.00 0.00 0.00 3.58
1962 2133 4.860907 GCCTTGTTGATGTGATCATGTTTC 59.139 41.667 0.00 0.00 39.39 2.78
2007 2178 1.846782 CGTTGATCGTCTTGGATCGTC 59.153 52.381 0.00 0.00 44.61 4.20
2010 2181 1.063616 TGATCGTCTTGGATCGTCGTC 59.936 52.381 0.00 0.00 44.61 4.20
2053 2328 0.716108 GGTCGCGAACTCTGTTGATG 59.284 55.000 18.88 0.00 0.00 3.07
2079 2535 4.634004 CCAAGTTTGGCGTATGATGAACTA 59.366 41.667 0.00 0.00 42.21 2.24
2080 2536 5.447279 CCAAGTTTGGCGTATGATGAACTAC 60.447 44.000 0.00 0.00 42.21 2.73
2084 2540 4.729227 TGGCGTATGATGAACTACTTGA 57.271 40.909 0.00 0.00 0.00 3.02
2124 2580 7.424227 TGAAAATTTGTTGATTTCCTCATGC 57.576 32.000 0.00 0.00 33.23 4.06
2138 2594 2.094894 CCTCATGCTTGACGTGATGAAC 59.905 50.000 0.00 0.00 43.38 3.18
2139 2595 2.076100 TCATGCTTGACGTGATGAACC 58.924 47.619 0.00 0.00 39.44 3.62
2200 2658 3.256631 AGGATGGTCATGAACTTTGTTGC 59.743 43.478 12.94 0.00 0.00 4.17
2256 2715 3.003689 GTGGTGAAAGTGGTCATGAACTG 59.996 47.826 12.94 0.00 0.00 3.16
2363 3036 6.889177 TGGCTTGATGAACTTATTTGATGGTA 59.111 34.615 0.00 0.00 0.00 3.25
2437 3111 1.254954 AGTGGTGAACGGGAGTACTC 58.745 55.000 14.87 14.87 46.69 2.59
2438 3112 0.245813 GTGGTGAACGGGAGTACTCC 59.754 60.000 30.72 30.72 46.69 3.85
2460 3134 9.833917 ACTCCCTTTGTAAACTAATATAAGAGC 57.166 33.333 0.00 0.00 0.00 4.09
2461 3135 9.832445 CTCCCTTTGTAAACTAATATAAGAGCA 57.168 33.333 0.00 0.00 0.00 4.26
2504 3178 9.490379 AAATGCTCTTATATTAGTTTACGGAGG 57.510 33.333 0.00 0.00 0.00 4.30
2505 3179 6.989659 TGCTCTTATATTAGTTTACGGAGGG 58.010 40.000 0.00 0.00 0.00 4.30
2506 3180 6.779049 TGCTCTTATATTAGTTTACGGAGGGA 59.221 38.462 0.00 0.00 0.00 4.20
2507 3181 7.039923 TGCTCTTATATTAGTTTACGGAGGGAG 60.040 40.741 0.00 0.00 0.00 4.30
2508 3182 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
2509 3183 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
2510 3184 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
2511 3185 9.294614 CTTATATTAGTTTACGGAGGGAGTACT 57.705 37.037 0.00 0.00 0.00 2.73
2538 3212 3.988379 TGGTTGTTGCTCACTGAAATC 57.012 42.857 0.00 0.00 0.00 2.17
2541 3217 3.565482 GGTTGTTGCTCACTGAAATCTGA 59.435 43.478 0.00 0.00 0.00 3.27
2553 3229 6.894654 TCACTGAAATCTGAGTCTATCCTCTT 59.105 38.462 0.00 0.00 32.50 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.836864 AAAGTGCATCATAATATAACTGACAGA 57.163 29.630 10.08 0.00 0.00 3.41
21 22 7.712264 TGATGAAAACCTTATTGCAAAAGTG 57.288 32.000 1.71 5.93 0.00 3.16
22 23 7.041848 GCTTGATGAAAACCTTATTGCAAAAGT 60.042 33.333 1.71 0.00 0.00 2.66
23 24 7.041916 TGCTTGATGAAAACCTTATTGCAAAAG 60.042 33.333 1.71 8.65 0.00 2.27
24 25 6.765036 TGCTTGATGAAAACCTTATTGCAAAA 59.235 30.769 1.71 0.00 0.00 2.44
25 26 6.286758 TGCTTGATGAAAACCTTATTGCAAA 58.713 32.000 1.71 0.00 0.00 3.68
26 27 5.851720 TGCTTGATGAAAACCTTATTGCAA 58.148 33.333 0.00 0.00 0.00 4.08
27 28 5.465532 TGCTTGATGAAAACCTTATTGCA 57.534 34.783 0.00 0.00 0.00 4.08
28 29 6.783892 TTTGCTTGATGAAAACCTTATTGC 57.216 33.333 0.00 0.00 0.00 3.56
29 30 8.991026 TCAATTTGCTTGATGAAAACCTTATTG 58.009 29.630 0.00 0.00 38.97 1.90
44 45 8.843262 TCATCTATGTTAGGATCAATTTGCTTG 58.157 33.333 0.00 0.00 36.09 4.01
45 46 8.985315 TCATCTATGTTAGGATCAATTTGCTT 57.015 30.769 0.00 0.00 0.00 3.91
46 47 8.985315 TTCATCTATGTTAGGATCAATTTGCT 57.015 30.769 0.00 0.00 0.00 3.91
51 52 8.800332 GGCATTTTCATCTATGTTAGGATCAAT 58.200 33.333 0.00 0.00 0.00 2.57
52 53 7.779326 TGGCATTTTCATCTATGTTAGGATCAA 59.221 33.333 0.00 0.00 0.00 2.57
53 54 7.229306 GTGGCATTTTCATCTATGTTAGGATCA 59.771 37.037 0.00 0.00 0.00 2.92
54 55 7.308830 GGTGGCATTTTCATCTATGTTAGGATC 60.309 40.741 0.00 0.00 0.00 3.36
55 56 6.491403 GGTGGCATTTTCATCTATGTTAGGAT 59.509 38.462 0.00 0.00 0.00 3.24
56 57 5.827797 GGTGGCATTTTCATCTATGTTAGGA 59.172 40.000 0.00 0.00 0.00 2.94
57 58 5.593909 TGGTGGCATTTTCATCTATGTTAGG 59.406 40.000 0.00 0.00 0.00 2.69
58 59 6.698008 TGGTGGCATTTTCATCTATGTTAG 57.302 37.500 0.00 0.00 0.00 2.34
59 60 7.490840 CAATGGTGGCATTTTCATCTATGTTA 58.509 34.615 0.00 0.00 0.00 2.41
60 61 6.342906 CAATGGTGGCATTTTCATCTATGTT 58.657 36.000 0.00 0.00 0.00 2.71
61 62 5.682990 GCAATGGTGGCATTTTCATCTATGT 60.683 40.000 0.00 0.00 0.00 2.29
62 63 4.748102 GCAATGGTGGCATTTTCATCTATG 59.252 41.667 0.00 0.00 0.00 2.23
63 64 4.500205 CGCAATGGTGGCATTTTCATCTAT 60.500 41.667 0.00 0.00 0.00 1.98
64 65 3.181488 CGCAATGGTGGCATTTTCATCTA 60.181 43.478 0.00 0.00 0.00 1.98
65 66 2.417651 CGCAATGGTGGCATTTTCATCT 60.418 45.455 0.00 0.00 0.00 2.90
66 67 1.928503 CGCAATGGTGGCATTTTCATC 59.071 47.619 0.00 0.00 0.00 2.92
67 68 1.275856 ACGCAATGGTGGCATTTTCAT 59.724 42.857 0.00 0.00 0.00 2.57
68 69 0.678395 ACGCAATGGTGGCATTTTCA 59.322 45.000 0.00 0.00 0.00 2.69
69 70 2.163412 TCTACGCAATGGTGGCATTTTC 59.837 45.455 0.00 0.00 0.00 2.29
70 71 2.166829 TCTACGCAATGGTGGCATTTT 58.833 42.857 0.00 0.00 0.00 1.82
71 72 1.832883 TCTACGCAATGGTGGCATTT 58.167 45.000 0.00 0.00 0.00 2.32
72 73 1.472480 GTTCTACGCAATGGTGGCATT 59.528 47.619 0.00 0.00 0.00 3.56
73 74 1.094785 GTTCTACGCAATGGTGGCAT 58.905 50.000 0.00 0.00 0.00 4.40
74 75 0.250510 TGTTCTACGCAATGGTGGCA 60.251 50.000 0.00 0.00 0.00 4.92
75 76 0.168128 GTGTTCTACGCAATGGTGGC 59.832 55.000 0.00 0.00 0.00 5.01
76 77 0.442310 CGTGTTCTACGCAATGGTGG 59.558 55.000 0.00 0.00 46.92 4.61
77 78 3.947279 CGTGTTCTACGCAATGGTG 57.053 52.632 0.00 0.00 46.92 4.17
88 89 8.842280 TGAAAGTTGTATATTTTTCCGTGTTCT 58.158 29.630 0.00 0.00 0.00 3.01
89 90 9.620660 ATGAAAGTTGTATATTTTTCCGTGTTC 57.379 29.630 0.00 0.00 0.00 3.18
105 106 8.637986 TGAAAAAGTGCCTTATATGAAAGTTGT 58.362 29.630 0.00 0.00 0.00 3.32
106 107 9.643693 ATGAAAAAGTGCCTTATATGAAAGTTG 57.356 29.630 0.00 0.00 0.00 3.16
107 108 9.860898 GATGAAAAAGTGCCTTATATGAAAGTT 57.139 29.630 0.00 0.00 0.00 2.66
108 109 8.184192 CGATGAAAAAGTGCCTTATATGAAAGT 58.816 33.333 0.00 0.00 0.00 2.66
109 110 7.645340 CCGATGAAAAAGTGCCTTATATGAAAG 59.355 37.037 0.00 0.00 0.00 2.62
110 111 7.338196 TCCGATGAAAAAGTGCCTTATATGAAA 59.662 33.333 0.00 0.00 0.00 2.69
111 112 6.826231 TCCGATGAAAAAGTGCCTTATATGAA 59.174 34.615 0.00 0.00 0.00 2.57
112 113 6.353323 TCCGATGAAAAAGTGCCTTATATGA 58.647 36.000 0.00 0.00 0.00 2.15
113 114 6.618287 TCCGATGAAAAAGTGCCTTATATG 57.382 37.500 0.00 0.00 0.00 1.78
114 115 6.294176 GCATCCGATGAAAAAGTGCCTTATAT 60.294 38.462 12.79 0.00 0.00 0.86
115 116 5.008613 GCATCCGATGAAAAAGTGCCTTATA 59.991 40.000 12.79 0.00 0.00 0.98
116 117 4.202050 GCATCCGATGAAAAAGTGCCTTAT 60.202 41.667 12.79 0.00 0.00 1.73
117 118 3.128589 GCATCCGATGAAAAAGTGCCTTA 59.871 43.478 12.79 0.00 0.00 2.69
118 119 2.094545 GCATCCGATGAAAAAGTGCCTT 60.095 45.455 12.79 0.00 0.00 4.35
119 120 1.474077 GCATCCGATGAAAAAGTGCCT 59.526 47.619 12.79 0.00 0.00 4.75
120 121 1.202114 TGCATCCGATGAAAAAGTGCC 59.798 47.619 12.79 0.00 0.00 5.01
121 122 2.253603 GTGCATCCGATGAAAAAGTGC 58.746 47.619 12.79 0.00 0.00 4.40
122 123 2.508867 CGTGCATCCGATGAAAAAGTG 58.491 47.619 12.79 0.00 0.00 3.16
123 124 1.468520 CCGTGCATCCGATGAAAAAGT 59.531 47.619 12.79 0.00 0.00 2.66
124 125 1.737236 TCCGTGCATCCGATGAAAAAG 59.263 47.619 12.79 0.00 0.00 2.27
125 126 1.814793 TCCGTGCATCCGATGAAAAA 58.185 45.000 12.79 0.00 0.00 1.94
126 127 2.036958 ATCCGTGCATCCGATGAAAA 57.963 45.000 12.79 0.00 0.00 2.29
127 128 2.036958 AATCCGTGCATCCGATGAAA 57.963 45.000 12.79 0.00 0.00 2.69
128 129 2.900716 TAATCCGTGCATCCGATGAA 57.099 45.000 12.79 0.00 0.00 2.57
129 130 2.900716 TTAATCCGTGCATCCGATGA 57.099 45.000 12.79 0.00 0.00 2.92
130 131 3.312421 ACTTTTAATCCGTGCATCCGATG 59.688 43.478 3.82 3.82 0.00 3.84
131 132 3.541632 ACTTTTAATCCGTGCATCCGAT 58.458 40.909 0.00 0.00 0.00 4.18
132 133 2.980568 ACTTTTAATCCGTGCATCCGA 58.019 42.857 0.00 0.00 0.00 4.55
133 134 3.757745 AACTTTTAATCCGTGCATCCG 57.242 42.857 0.00 0.00 0.00 4.18
134 135 5.554822 TGTAACTTTTAATCCGTGCATCC 57.445 39.130 0.00 0.00 0.00 3.51
135 136 8.395633 ACTATTGTAACTTTTAATCCGTGCATC 58.604 33.333 0.00 0.00 0.00 3.91
136 137 8.276252 ACTATTGTAACTTTTAATCCGTGCAT 57.724 30.769 0.00 0.00 0.00 3.96
137 138 7.675962 ACTATTGTAACTTTTAATCCGTGCA 57.324 32.000 0.00 0.00 0.00 4.57
138 139 8.959734 AAACTATTGTAACTTTTAATCCGTGC 57.040 30.769 0.00 0.00 0.00 5.34
159 160 9.392259 GGAGTTGCACTACCTTATATTAAAACT 57.608 33.333 0.00 0.00 0.00 2.66
160 161 9.392259 AGGAGTTGCACTACCTTATATTAAAAC 57.608 33.333 0.00 0.00 25.63 2.43
161 162 9.969001 AAGGAGTTGCACTACCTTATATTAAAA 57.031 29.630 13.54 0.00 35.47 1.52
162 163 9.969001 AAAGGAGTTGCACTACCTTATATTAAA 57.031 29.630 14.93 0.00 35.88 1.52
163 164 9.609346 GAAAGGAGTTGCACTACCTTATATTAA 57.391 33.333 14.93 0.00 35.88 1.40
164 165 7.924412 CGAAAGGAGTTGCACTACCTTATATTA 59.076 37.037 14.93 0.00 35.88 0.98
165 166 6.761714 CGAAAGGAGTTGCACTACCTTATATT 59.238 38.462 14.93 3.33 35.88 1.28
166 167 6.281405 CGAAAGGAGTTGCACTACCTTATAT 58.719 40.000 14.93 3.62 35.88 0.86
167 168 5.657474 CGAAAGGAGTTGCACTACCTTATA 58.343 41.667 14.93 0.00 35.88 0.98
168 169 4.504858 CGAAAGGAGTTGCACTACCTTAT 58.495 43.478 14.93 7.98 35.88 1.73
169 170 3.921677 CGAAAGGAGTTGCACTACCTTA 58.078 45.455 14.93 0.00 35.88 2.69
170 171 2.767505 CGAAAGGAGTTGCACTACCTT 58.232 47.619 10.48 10.48 37.35 3.50
171 172 2.457366 CGAAAGGAGTTGCACTACCT 57.543 50.000 0.00 0.00 25.63 3.08
185 186 2.032634 TGCAGCGCCTAACCGAAAG 61.033 57.895 2.29 0.00 0.00 2.62
186 187 2.031314 TGCAGCGCCTAACCGAAA 59.969 55.556 2.29 0.00 0.00 3.46
187 188 1.879737 TAGTGCAGCGCCTAACCGAA 61.880 55.000 2.29 0.00 0.00 4.30
188 189 2.344981 TAGTGCAGCGCCTAACCGA 61.345 57.895 2.29 0.00 0.00 4.69
189 190 2.165301 GTAGTGCAGCGCCTAACCG 61.165 63.158 2.29 0.00 0.00 4.44
190 191 0.462047 ATGTAGTGCAGCGCCTAACC 60.462 55.000 2.29 0.00 0.00 2.85
191 192 1.062587 CAATGTAGTGCAGCGCCTAAC 59.937 52.381 2.29 0.00 0.00 2.34
192 193 1.338674 ACAATGTAGTGCAGCGCCTAA 60.339 47.619 2.29 0.00 0.00 2.69
193 194 0.249120 ACAATGTAGTGCAGCGCCTA 59.751 50.000 2.29 0.00 0.00 3.93
194 195 1.003355 ACAATGTAGTGCAGCGCCT 60.003 52.632 2.29 0.00 0.00 5.52
195 196 1.135315 CACAATGTAGTGCAGCGCC 59.865 57.895 2.29 0.00 32.04 6.53
196 197 4.751539 CACAATGTAGTGCAGCGC 57.248 55.556 0.00 0.00 32.04 5.92
202 203 4.275689 TGAAAGGAGTTGCACAATGTAGTG 59.724 41.667 0.00 0.00 42.37 2.74
203 204 4.460263 TGAAAGGAGTTGCACAATGTAGT 58.540 39.130 0.00 0.00 0.00 2.73
204 205 4.614535 GCTGAAAGGAGTTGCACAATGTAG 60.615 45.833 0.00 0.00 0.00 2.74
205 206 3.253188 GCTGAAAGGAGTTGCACAATGTA 59.747 43.478 0.00 0.00 0.00 2.29
206 207 2.035066 GCTGAAAGGAGTTGCACAATGT 59.965 45.455 0.00 0.00 0.00 2.71
207 208 2.295349 AGCTGAAAGGAGTTGCACAATG 59.705 45.455 0.00 0.00 0.00 2.82
208 209 2.590821 AGCTGAAAGGAGTTGCACAAT 58.409 42.857 0.00 0.00 0.00 2.71
209 210 2.057137 AGCTGAAAGGAGTTGCACAA 57.943 45.000 0.00 0.00 0.00 3.33
210 211 2.550855 CCTAGCTGAAAGGAGTTGCACA 60.551 50.000 0.00 0.00 36.08 4.57
211 212 2.079925 CCTAGCTGAAAGGAGTTGCAC 58.920 52.381 0.00 0.00 36.08 4.57
212 213 1.611673 GCCTAGCTGAAAGGAGTTGCA 60.612 52.381 5.13 0.00 36.08 4.08
213 214 1.090728 GCCTAGCTGAAAGGAGTTGC 58.909 55.000 5.13 0.00 36.08 4.17
214 215 1.363744 CGCCTAGCTGAAAGGAGTTG 58.636 55.000 5.13 0.00 36.08 3.16
215 216 0.391793 GCGCCTAGCTGAAAGGAGTT 60.392 55.000 5.13 0.00 44.04 3.01
216 217 1.219393 GCGCCTAGCTGAAAGGAGT 59.781 57.895 5.13 0.00 44.04 3.85
217 218 4.116878 GCGCCTAGCTGAAAGGAG 57.883 61.111 5.13 2.79 44.04 3.69
227 228 2.358615 TGGTTGTGCAGCGCCTAG 60.359 61.111 2.29 0.00 0.00 3.02
228 229 2.358615 CTGGTTGTGCAGCGCCTA 60.359 61.111 2.29 0.00 0.00 3.93
231 232 3.730761 CTCCTGGTTGTGCAGCGC 61.731 66.667 0.00 0.00 0.00 5.92
232 233 2.281070 ACTCCTGGTTGTGCAGCG 60.281 61.111 0.00 0.00 0.00 5.18
233 234 2.263741 CCACTCCTGGTTGTGCAGC 61.264 63.158 14.01 0.00 32.03 5.25
234 235 1.601759 CCCACTCCTGGTTGTGCAG 60.602 63.158 14.01 6.72 35.46 4.41
235 236 2.515398 CCCACTCCTGGTTGTGCA 59.485 61.111 14.01 0.00 35.46 4.57
236 237 2.282462 CCCCACTCCTGGTTGTGC 60.282 66.667 14.01 0.00 35.46 4.57
237 238 2.282462 GCCCCACTCCTGGTTGTG 60.282 66.667 12.99 12.99 35.46 3.33
238 239 3.580319 GGCCCCACTCCTGGTTGT 61.580 66.667 0.00 0.00 35.46 3.32
239 240 4.366684 GGGCCCCACTCCTGGTTG 62.367 72.222 12.23 0.00 35.46 3.77
255 256 4.738998 TCCAACATGGCAGCCCGG 62.739 66.667 9.64 3.05 37.47 5.73
256 257 3.443045 GTCCAACATGGCAGCCCG 61.443 66.667 9.64 2.13 37.47 6.13
257 258 2.283101 TGTCCAACATGGCAGCCC 60.283 61.111 9.64 0.00 37.47 5.19
258 259 2.345760 CCTGTCCAACATGGCAGCC 61.346 63.158 3.66 3.66 39.05 4.85
259 260 2.998279 GCCTGTCCAACATGGCAGC 61.998 63.158 12.45 0.00 40.07 5.25
260 261 2.693762 CGCCTGTCCAACATGGCAG 61.694 63.158 15.76 10.22 40.22 4.85
261 262 2.672651 CGCCTGTCCAACATGGCA 60.673 61.111 15.76 0.00 40.22 4.92
262 263 2.672996 ACGCCTGTCCAACATGGC 60.673 61.111 0.00 9.24 37.47 4.40
263 264 1.600636 ACACGCCTGTCCAACATGG 60.601 57.895 0.00 0.00 39.43 3.66
264 265 1.575922 CACACGCCTGTCCAACATG 59.424 57.895 0.00 0.00 0.00 3.21
265 266 1.600636 CCACACGCCTGTCCAACAT 60.601 57.895 0.00 0.00 0.00 2.71
266 267 2.203139 CCACACGCCTGTCCAACA 60.203 61.111 0.00 0.00 0.00 3.33
267 268 3.660111 GCCACACGCCTGTCCAAC 61.660 66.667 0.00 0.00 0.00 3.77
283 284 2.583593 CGTCAGGAGCTTAGGCGC 60.584 66.667 0.00 0.00 44.37 6.53
284 285 2.583593 GCGTCAGGAGCTTAGGCG 60.584 66.667 4.00 4.00 44.37 5.52
285 286 1.520342 CAGCGTCAGGAGCTTAGGC 60.520 63.158 0.00 0.00 44.06 3.93
286 287 1.520342 GCAGCGTCAGGAGCTTAGG 60.520 63.158 0.00 0.00 44.06 2.69
287 288 0.805322 CTGCAGCGTCAGGAGCTTAG 60.805 60.000 0.00 0.00 44.06 2.18
288 289 1.216444 CTGCAGCGTCAGGAGCTTA 59.784 57.895 0.00 0.00 44.06 3.09
289 290 1.536073 TACTGCAGCGTCAGGAGCTT 61.536 55.000 15.27 0.00 44.06 3.74
291 292 0.385751 TATACTGCAGCGTCAGGAGC 59.614 55.000 15.27 0.00 38.36 4.70
292 293 1.678627 ACTATACTGCAGCGTCAGGAG 59.321 52.381 15.27 4.31 38.36 3.69
293 294 1.405463 CACTATACTGCAGCGTCAGGA 59.595 52.381 15.27 4.66 38.36 3.86
294 295 1.135139 ACACTATACTGCAGCGTCAGG 59.865 52.381 15.27 2.34 38.36 3.86
295 296 2.188524 CACACTATACTGCAGCGTCAG 58.811 52.381 15.27 8.59 39.86 3.51
296 297 1.135112 CCACACTATACTGCAGCGTCA 60.135 52.381 15.27 0.00 0.00 4.35
297 298 1.560923 CCACACTATACTGCAGCGTC 58.439 55.000 15.27 0.00 0.00 5.19
298 299 0.460284 GCCACACTATACTGCAGCGT 60.460 55.000 15.27 5.02 0.00 5.07
299 300 1.482621 CGCCACACTATACTGCAGCG 61.483 60.000 15.27 4.21 36.06 5.18
300 301 1.766143 GCGCCACACTATACTGCAGC 61.766 60.000 15.27 0.00 0.00 5.25
301 302 1.154205 GGCGCCACACTATACTGCAG 61.154 60.000 24.80 13.48 0.00 4.41
302 303 1.153449 GGCGCCACACTATACTGCA 60.153 57.895 24.80 0.00 0.00 4.41
303 304 0.387929 TAGGCGCCACACTATACTGC 59.612 55.000 31.54 0.00 0.00 4.40
304 305 2.558795 AGATAGGCGCCACACTATACTG 59.441 50.000 31.54 0.00 30.43 2.74
305 306 2.558795 CAGATAGGCGCCACACTATACT 59.441 50.000 31.54 13.05 30.43 2.12
306 307 2.296471 ACAGATAGGCGCCACACTATAC 59.704 50.000 31.54 11.13 30.43 1.47
307 308 2.557056 GACAGATAGGCGCCACACTATA 59.443 50.000 31.54 11.70 30.43 1.31
308 309 1.341531 GACAGATAGGCGCCACACTAT 59.658 52.381 31.54 17.74 32.83 2.12
309 310 0.744874 GACAGATAGGCGCCACACTA 59.255 55.000 31.54 12.99 0.00 2.74
310 311 1.517832 GACAGATAGGCGCCACACT 59.482 57.895 31.54 20.50 0.00 3.55
311 312 1.878522 CGACAGATAGGCGCCACAC 60.879 63.158 31.54 18.46 45.03 3.82
312 313 2.494445 CGACAGATAGGCGCCACA 59.506 61.111 31.54 17.07 45.03 4.17
318 319 4.971125 GGCGCCCGACAGATAGGC 62.971 72.222 18.11 0.00 43.53 3.93
319 320 3.536917 TGGCGCCCGACAGATAGG 61.537 66.667 26.77 0.00 0.00 2.57
320 321 2.279517 GTGGCGCCCGACAGATAG 60.280 66.667 26.77 0.00 31.40 2.08
321 322 2.758327 AGTGGCGCCCGACAGATA 60.758 61.111 26.77 0.00 31.40 1.98
322 323 4.148825 GAGTGGCGCCCGACAGAT 62.149 66.667 26.77 0.00 31.40 2.90
327 328 4.077184 ATTTCGAGTGGCGCCCGA 62.077 61.111 26.77 23.03 40.61 5.14
328 329 3.864686 CATTTCGAGTGGCGCCCG 61.865 66.667 26.77 20.88 40.61 6.13
329 330 3.508840 CCATTTCGAGTGGCGCCC 61.509 66.667 26.77 15.80 40.61 6.13
330 331 2.746277 ACCATTTCGAGTGGCGCC 60.746 61.111 22.73 22.73 40.49 6.53
331 332 1.970917 CTGACCATTTCGAGTGGCGC 61.971 60.000 16.30 0.00 40.49 6.53
332 333 1.970917 GCTGACCATTTCGAGTGGCG 61.971 60.000 16.30 8.31 40.49 5.69
333 334 0.674895 AGCTGACCATTTCGAGTGGC 60.675 55.000 16.30 10.88 40.49 5.01
334 335 1.363744 GAGCTGACCATTTCGAGTGG 58.636 55.000 15.15 15.15 42.55 4.00
335 336 0.994995 CGAGCTGACCATTTCGAGTG 59.005 55.000 0.00 0.00 35.19 3.51
336 337 0.108615 CCGAGCTGACCATTTCGAGT 60.109 55.000 0.00 0.00 35.19 4.18
337 338 0.108615 ACCGAGCTGACCATTTCGAG 60.109 55.000 0.00 0.00 35.19 4.04
338 339 0.389817 CACCGAGCTGACCATTTCGA 60.390 55.000 0.00 0.00 35.19 3.71
339 340 1.970917 GCACCGAGCTGACCATTTCG 61.971 60.000 0.00 0.00 41.15 3.46
340 341 0.955428 TGCACCGAGCTGACCATTTC 60.955 55.000 0.00 0.00 45.94 2.17
341 342 0.537143 TTGCACCGAGCTGACCATTT 60.537 50.000 0.00 0.00 45.94 2.32
342 343 0.322816 ATTGCACCGAGCTGACCATT 60.323 50.000 0.00 0.00 45.94 3.16
343 344 0.322816 AATTGCACCGAGCTGACCAT 60.323 50.000 0.00 0.00 45.94 3.55
344 345 0.537143 AAATTGCACCGAGCTGACCA 60.537 50.000 0.00 0.00 45.94 4.02
345 346 0.598065 AAAATTGCACCGAGCTGACC 59.402 50.000 0.00 0.00 45.94 4.02
346 347 2.422276 AAAAATTGCACCGAGCTGAC 57.578 45.000 0.00 0.00 45.94 3.51
362 363 8.215926 TCACAATCTAAACTCCTTTCGAAAAA 57.784 30.769 12.41 2.38 0.00 1.94
363 364 7.795482 TCACAATCTAAACTCCTTTCGAAAA 57.205 32.000 12.41 0.00 0.00 2.29
364 365 7.795482 TTCACAATCTAAACTCCTTTCGAAA 57.205 32.000 10.71 10.71 0.00 3.46
365 366 7.979444 ATTCACAATCTAAACTCCTTTCGAA 57.021 32.000 0.00 0.00 0.00 3.71
366 367 7.878127 AGAATTCACAATCTAAACTCCTTTCGA 59.122 33.333 8.44 0.00 0.00 3.71
367 368 8.034058 AGAATTCACAATCTAAACTCCTTTCG 57.966 34.615 8.44 0.00 0.00 3.46
371 372 9.971922 CAAAAAGAATTCACAATCTAAACTCCT 57.028 29.630 8.44 0.00 0.00 3.69
372 373 9.750125 ACAAAAAGAATTCACAATCTAAACTCC 57.250 29.630 8.44 0.00 0.00 3.85
374 375 9.750125 GGACAAAAAGAATTCACAATCTAAACT 57.250 29.630 8.44 0.00 0.00 2.66
375 376 9.750125 AGGACAAAAAGAATTCACAATCTAAAC 57.250 29.630 8.44 0.00 0.00 2.01
379 380 8.579863 CCTAAGGACAAAAAGAATTCACAATCT 58.420 33.333 8.44 0.00 0.00 2.40
380 381 8.360390 ACCTAAGGACAAAAAGAATTCACAATC 58.640 33.333 8.44 0.00 0.00 2.67
381 382 8.250143 ACCTAAGGACAAAAAGAATTCACAAT 57.750 30.769 8.44 0.00 0.00 2.71
382 383 7.340743 TGACCTAAGGACAAAAAGAATTCACAA 59.659 33.333 8.44 0.00 0.00 3.33
383 384 6.831353 TGACCTAAGGACAAAAAGAATTCACA 59.169 34.615 8.44 0.00 0.00 3.58
384 385 7.272037 TGACCTAAGGACAAAAAGAATTCAC 57.728 36.000 8.44 0.00 0.00 3.18
385 386 7.889873 TTGACCTAAGGACAAAAAGAATTCA 57.110 32.000 8.44 0.00 34.82 2.57
389 390 9.362151 ACATATTTGACCTAAGGACAAAAAGAA 57.638 29.630 11.33 1.11 46.24 2.52
390 391 8.792633 CACATATTTGACCTAAGGACAAAAAGA 58.207 33.333 11.33 2.87 46.24 2.52
391 392 8.576442 ACACATATTTGACCTAAGGACAAAAAG 58.424 33.333 11.33 7.66 46.24 2.27
392 393 8.472007 ACACATATTTGACCTAAGGACAAAAA 57.528 30.769 11.33 0.00 46.24 1.94
393 394 8.472007 AACACATATTTGACCTAAGGACAAAA 57.528 30.769 11.33 0.00 46.24 2.44
394 395 8.472007 AAACACATATTTGACCTAAGGACAAA 57.528 30.769 10.04 10.04 46.87 2.83
395 396 8.472007 AAAACACATATTTGACCTAAGGACAA 57.528 30.769 0.00 0.00 35.80 3.18
396 397 8.472007 AAAAACACATATTTGACCTAAGGACA 57.528 30.769 0.00 0.00 0.00 4.02
428 429 3.089284 CCAATACGGAAGAGGGCTTTTT 58.911 45.455 0.00 0.00 36.56 1.94
429 430 2.723273 CCAATACGGAAGAGGGCTTTT 58.277 47.619 0.00 0.00 36.56 2.27
430 431 1.682087 GCCAATACGGAAGAGGGCTTT 60.682 52.381 0.00 0.00 38.37 3.51
431 432 0.107165 GCCAATACGGAAGAGGGCTT 60.107 55.000 0.00 0.00 38.37 4.35
432 433 0.983378 AGCCAATACGGAAGAGGGCT 60.983 55.000 0.00 0.00 46.33 5.19
433 434 0.533085 GAGCCAATACGGAAGAGGGC 60.533 60.000 0.00 0.00 41.65 5.19
434 435 0.106894 GGAGCCAATACGGAAGAGGG 59.893 60.000 0.00 0.00 36.56 4.30
435 436 1.123928 AGGAGCCAATACGGAAGAGG 58.876 55.000 0.00 0.00 36.56 3.69
436 437 2.693591 TGTAGGAGCCAATACGGAAGAG 59.306 50.000 0.00 0.00 36.56 2.85
437 438 2.742348 TGTAGGAGCCAATACGGAAGA 58.258 47.619 0.00 0.00 36.56 2.87
438 439 3.753294 ATGTAGGAGCCAATACGGAAG 57.247 47.619 0.00 0.00 36.56 3.46
439 440 5.542635 AGAATATGTAGGAGCCAATACGGAA 59.457 40.000 0.00 0.00 36.56 4.30
440 441 5.084519 AGAATATGTAGGAGCCAATACGGA 58.915 41.667 0.00 0.00 36.56 4.69
441 442 5.407407 AGAATATGTAGGAGCCAATACGG 57.593 43.478 0.00 0.00 38.11 4.02
442 443 6.028368 CGTAGAATATGTAGGAGCCAATACG 58.972 44.000 0.00 0.00 0.00 3.06
443 444 7.154435 TCGTAGAATATGTAGGAGCCAATAC 57.846 40.000 0.00 0.00 0.00 1.89
444 445 7.668469 TCTTCGTAGAATATGTAGGAGCCAATA 59.332 37.037 0.00 0.00 45.90 1.90
445 446 6.493802 TCTTCGTAGAATATGTAGGAGCCAAT 59.506 38.462 0.00 0.00 45.90 3.16
446 447 5.831525 TCTTCGTAGAATATGTAGGAGCCAA 59.168 40.000 0.00 0.00 45.90 4.52
487 488 6.186957 AGGGAACAATGTATCTTGTTATGCA 58.813 36.000 2.45 0.00 46.50 3.96
497 498 5.220854 CGGATGACAAAGGGAACAATGTATC 60.221 44.000 0.00 0.00 32.42 2.24
520 521 2.572191 TCTCGGGCAAGTAACATACG 57.428 50.000 0.00 0.00 0.00 3.06
557 558 8.199449 CCGGTAACAAGATTGAACTAGGTATTA 58.801 37.037 0.00 0.00 0.00 0.98
575 576 2.922740 AAAGAGACTTGCCGGTAACA 57.077 45.000 0.00 0.00 0.00 2.41
604 605 0.872881 GTTGCGGGATGATGCATTGC 60.873 55.000 0.00 0.46 41.42 3.56
605 606 0.742505 AGTTGCGGGATGATGCATTG 59.257 50.000 0.00 0.00 41.42 2.82
646 647 4.220693 TGCACATCACTATAAGCCTTGT 57.779 40.909 0.00 0.00 0.00 3.16
671 672 0.818445 GTATCTGTCGGCCCTCTCGA 60.818 60.000 0.00 0.00 0.00 4.04
682 683 4.363999 CGATTGTTGGAGAGGTATCTGTC 58.636 47.826 0.00 0.00 35.30 3.51
684 685 3.384789 TCCGATTGTTGGAGAGGTATCTG 59.615 47.826 0.00 0.00 35.30 2.90
697 698 6.540438 TTAGGATTAGTCACTCCGATTGTT 57.460 37.500 0.00 0.00 36.62 2.83
724 725 6.201425 GGTACTTGTTGAGTTGACGTATTTCA 59.799 38.462 0.00 0.00 39.86 2.69
753 754 2.330216 AGGTGCTCTACAGGTGTTTCT 58.670 47.619 0.00 0.00 0.00 2.52
756 757 4.910458 ATAAAGGTGCTCTACAGGTGTT 57.090 40.909 0.00 0.00 0.00 3.32
785 786 3.196463 ACCAAACATCACAACGTAACGA 58.804 40.909 0.00 0.00 0.00 3.85
786 787 3.595709 ACCAAACATCACAACGTAACG 57.404 42.857 0.00 0.00 0.00 3.18
799 800 4.727507 ACATTTTGTGTGCTACCAAACA 57.272 36.364 0.00 0.00 40.28 2.83
817 818 3.265995 ACTCCCGTTTATGGAAGGAACAT 59.734 43.478 0.00 0.00 0.00 2.71
825 826 2.799126 ATGCAACTCCCGTTTATGGA 57.201 45.000 0.00 0.00 0.00 3.41
827 828 5.527214 TGAGATTATGCAACTCCCGTTTATG 59.473 40.000 0.00 0.00 0.00 1.90
828 829 5.680619 TGAGATTATGCAACTCCCGTTTAT 58.319 37.500 0.00 0.00 0.00 1.40
860 861 9.846248 GCTTTCTTCATGACTTATACATGTTTT 57.154 29.630 2.30 0.00 43.56 2.43
861 862 9.013229 TGCTTTCTTCATGACTTATACATGTTT 57.987 29.630 2.30 0.00 43.56 2.83
905 906 8.662781 TCGTTCTATTAGCTTAGCAATTGATT 57.337 30.769 10.34 0.00 0.00 2.57
911 912 6.203808 TGACTCGTTCTATTAGCTTAGCAA 57.796 37.500 7.07 0.00 0.00 3.91
923 924 6.308041 CGAAATGATTGACTTGACTCGTTCTA 59.692 38.462 0.00 0.00 0.00 2.10
924 925 5.119279 CGAAATGATTGACTTGACTCGTTCT 59.881 40.000 0.00 0.00 0.00 3.01
928 929 3.123453 TGCGAAATGATTGACTTGACTCG 59.877 43.478 0.00 0.00 0.00 4.18
930 931 3.189287 GGTGCGAAATGATTGACTTGACT 59.811 43.478 0.00 0.00 0.00 3.41
944 945 3.961414 GGTGGAGGGGGTGCGAAA 61.961 66.667 0.00 0.00 0.00 3.46
948 949 2.558380 GATTCTGGTGGAGGGGGTGC 62.558 65.000 0.00 0.00 0.00 5.01
949 950 1.609783 GATTCTGGTGGAGGGGGTG 59.390 63.158 0.00 0.00 0.00 4.61
950 951 1.619669 GGATTCTGGTGGAGGGGGT 60.620 63.158 0.00 0.00 0.00 4.95
951 952 1.214305 TTGGATTCTGGTGGAGGGGG 61.214 60.000 0.00 0.00 0.00 5.40
952 953 0.704076 TTTGGATTCTGGTGGAGGGG 59.296 55.000 0.00 0.00 0.00 4.79
953 954 2.603075 TTTTGGATTCTGGTGGAGGG 57.397 50.000 0.00 0.00 0.00 4.30
954 955 3.445096 GTGATTTTGGATTCTGGTGGAGG 59.555 47.826 0.00 0.00 0.00 4.30
955 956 4.081406 TGTGATTTTGGATTCTGGTGGAG 58.919 43.478 0.00 0.00 0.00 3.86
956 957 4.081406 CTGTGATTTTGGATTCTGGTGGA 58.919 43.478 0.00 0.00 0.00 4.02
957 958 3.194116 CCTGTGATTTTGGATTCTGGTGG 59.806 47.826 0.00 0.00 0.00 4.61
958 959 4.081406 TCCTGTGATTTTGGATTCTGGTG 58.919 43.478 0.00 0.00 0.00 4.17
959 960 4.043310 TCTCCTGTGATTTTGGATTCTGGT 59.957 41.667 0.00 0.00 0.00 4.00
960 961 4.592942 TCTCCTGTGATTTTGGATTCTGG 58.407 43.478 0.00 0.00 0.00 3.86
961 962 5.494724 TCTCTCCTGTGATTTTGGATTCTG 58.505 41.667 0.00 0.00 0.00 3.02
962 963 5.339035 CCTCTCTCCTGTGATTTTGGATTCT 60.339 44.000 0.00 0.00 0.00 2.40
963 964 4.880696 CCTCTCTCCTGTGATTTTGGATTC 59.119 45.833 0.00 0.00 0.00 2.52
964 965 4.324874 CCCTCTCTCCTGTGATTTTGGATT 60.325 45.833 0.00 0.00 0.00 3.01
965 966 3.201708 CCCTCTCTCCTGTGATTTTGGAT 59.798 47.826 0.00 0.00 0.00 3.41
966 967 2.573462 CCCTCTCTCCTGTGATTTTGGA 59.427 50.000 0.00 0.00 0.00 3.53
967 968 2.356535 CCCCTCTCTCCTGTGATTTTGG 60.357 54.545 0.00 0.00 0.00 3.28
968 969 2.573462 TCCCCTCTCTCCTGTGATTTTG 59.427 50.000 0.00 0.00 0.00 2.44
969 970 2.843113 CTCCCCTCTCTCCTGTGATTTT 59.157 50.000 0.00 0.00 0.00 1.82
970 971 2.045047 TCTCCCCTCTCTCCTGTGATTT 59.955 50.000 0.00 0.00 0.00 2.17
971 972 1.648568 TCTCCCCTCTCTCCTGTGATT 59.351 52.381 0.00 0.00 0.00 2.57
972 973 1.217689 CTCTCCCCTCTCTCCTGTGAT 59.782 57.143 0.00 0.00 0.00 3.06
973 974 0.628522 CTCTCCCCTCTCTCCTGTGA 59.371 60.000 0.00 0.00 0.00 3.58
974 975 0.396974 CCTCTCCCCTCTCTCCTGTG 60.397 65.000 0.00 0.00 0.00 3.66
975 976 1.589399 CCCTCTCCCCTCTCTCCTGT 61.589 65.000 0.00 0.00 0.00 4.00
976 977 1.232792 CCCTCTCCCCTCTCTCCTG 59.767 68.421 0.00 0.00 0.00 3.86
977 978 0.998945 CTCCCTCTCCCCTCTCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
978 979 0.996762 TCTCCCTCTCCCCTCTCTCC 60.997 65.000 0.00 0.00 0.00 3.71
985 986 1.768077 CCATGGTCTCCCTCTCCCC 60.768 68.421 2.57 0.00 0.00 4.81
987 988 0.985490 AAGCCATGGTCTCCCTCTCC 60.985 60.000 14.67 0.00 0.00 3.71
1042 1043 1.003355 CGAGCAGCTTCTTGGGGAA 60.003 57.895 0.00 0.00 0.00 3.97
1187 1216 3.432588 CGTCCTCGTCCTCGCTGT 61.433 66.667 0.00 0.00 36.96 4.40
1246 1275 4.097361 GGGGAAGCTGGGGACGAC 62.097 72.222 0.00 0.00 0.00 4.34
1309 1342 1.816863 AAGGCGAACGCAGAGAAGGA 61.817 55.000 20.16 0.00 44.11 3.36
1359 1392 5.427378 TGTTGTGATCAGAACTCAACTTGA 58.573 37.500 29.38 9.92 40.24 3.02
1360 1393 5.739752 TGTTGTGATCAGAACTCAACTTG 57.260 39.130 29.38 0.00 40.24 3.16
1361 1394 4.274459 GCTGTTGTGATCAGAACTCAACTT 59.726 41.667 29.38 0.00 40.24 2.66
1362 1395 3.812053 GCTGTTGTGATCAGAACTCAACT 59.188 43.478 29.38 0.00 40.24 3.16
1363 1396 3.812053 AGCTGTTGTGATCAGAACTCAAC 59.188 43.478 29.38 22.36 40.10 3.18
1364 1397 4.077300 AGCTGTTGTGATCAGAACTCAA 57.923 40.909 29.38 13.20 35.81 3.02
1365 1398 3.758755 AGCTGTTGTGATCAGAACTCA 57.241 42.857 29.38 14.43 35.81 3.41
1366 1399 5.210715 CAAAAGCTGTTGTGATCAGAACTC 58.789 41.667 29.38 21.99 35.81 3.01
1367 1400 4.498682 GCAAAAGCTGTTGTGATCAGAACT 60.499 41.667 29.38 12.47 35.81 3.01
1368 1401 3.732721 GCAAAAGCTGTTGTGATCAGAAC 59.267 43.478 24.78 24.78 35.20 3.01
1369 1402 3.243501 GGCAAAAGCTGTTGTGATCAGAA 60.244 43.478 17.92 0.23 35.20 3.02
1370 1403 2.294233 GGCAAAAGCTGTTGTGATCAGA 59.706 45.455 17.92 0.00 35.20 3.27
1371 1404 2.669364 GGCAAAAGCTGTTGTGATCAG 58.331 47.619 17.92 0.00 36.18 2.90
1372 1405 1.001487 CGGCAAAAGCTGTTGTGATCA 60.001 47.619 17.92 0.00 0.00 2.92
1373 1406 1.689959 CGGCAAAAGCTGTTGTGATC 58.310 50.000 17.92 1.12 0.00 2.92
1374 1407 0.318955 GCGGCAAAAGCTGTTGTGAT 60.319 50.000 17.92 0.00 0.00 3.06
1375 1408 1.065600 GCGGCAAAAGCTGTTGTGA 59.934 52.632 17.92 0.00 0.00 3.58
1376 1409 0.936297 GAGCGGCAAAAGCTGTTGTG 60.936 55.000 17.92 11.78 46.13 3.33
1377 1410 1.103398 AGAGCGGCAAAAGCTGTTGT 61.103 50.000 17.92 0.00 46.13 3.32
1378 1411 0.031178 AAGAGCGGCAAAAGCTGTTG 59.969 50.000 12.62 12.62 44.80 3.33
1379 1412 0.031178 CAAGAGCGGCAAAAGCTGTT 59.969 50.000 1.45 0.00 46.98 3.16
1380 1413 0.819259 TCAAGAGCGGCAAAAGCTGT 60.819 50.000 1.45 0.00 46.13 4.40
1389 1431 2.817423 CTGCGGAATCAAGAGCGGC 61.817 63.158 0.00 0.00 0.00 6.53
1390 1432 0.531532 ATCTGCGGAATCAAGAGCGG 60.532 55.000 0.00 0.00 37.33 5.52
1393 1435 1.329906 GCACATCTGCGGAATCAAGAG 59.670 52.381 0.00 0.00 32.44 2.85
1409 1451 3.066190 CCTACCGGGTCGAGCACA 61.066 66.667 17.59 0.00 0.00 4.57
1517 1565 2.856988 TTCTCCACCCACCACCCC 60.857 66.667 0.00 0.00 0.00 4.95
1587 1635 2.048597 CCACACCTTCACGCGCTA 60.049 61.111 5.73 0.00 0.00 4.26
1654 1702 1.602327 GGGGTCGTAGTCGCCTTTCT 61.602 60.000 0.00 0.00 44.30 2.52
1767 1815 2.669569 CACCTTGGGCACGGTCAG 60.670 66.667 0.00 0.00 29.62 3.51
1838 1951 2.898705 ACTACCACTACGACTACTCGG 58.101 52.381 0.00 0.00 44.80 4.63
1859 1972 1.137872 GATCCGTCTTCCATGAGTGCT 59.862 52.381 0.00 0.00 0.00 4.40
1860 1973 1.576356 GATCCGTCTTCCATGAGTGC 58.424 55.000 0.00 0.00 0.00 4.40
1861 1974 1.405463 TCGATCCGTCTTCCATGAGTG 59.595 52.381 0.00 0.00 0.00 3.51
1888 2002 1.893137 TGAGCACTACCACTACCACTG 59.107 52.381 0.00 0.00 0.00 3.66
1921 2090 2.255554 GTCTCTCACACTCGCGCA 59.744 61.111 8.75 0.00 0.00 6.09
1953 2124 3.189287 GGCAGAAAGACACGAAACATGAT 59.811 43.478 0.00 0.00 0.00 2.45
1962 2133 1.308998 AAACAGGGCAGAAAGACACG 58.691 50.000 0.00 0.00 0.00 4.49
2007 2178 0.099613 CCACCAGTCGATCAGAGACG 59.900 60.000 0.00 0.00 42.97 4.18
2010 2181 1.177401 TCACCACCAGTCGATCAGAG 58.823 55.000 0.00 0.00 0.00 3.35
2079 2535 5.078949 TCATGACCAATTTCACCATCAAGT 58.921 37.500 0.00 0.00 0.00 3.16
2080 2536 5.648178 TCATGACCAATTTCACCATCAAG 57.352 39.130 0.00 0.00 0.00 3.02
2084 2540 7.720515 ACAAATTTTCATGACCAATTTCACCAT 59.279 29.630 16.77 0.09 29.49 3.55
2124 2580 4.151070 CAAAATCGGTTCATCACGTCAAG 58.849 43.478 0.00 0.00 0.00 3.02
2138 2594 3.244044 ACCAATTTCACCACCAAAATCGG 60.244 43.478 0.00 0.00 0.00 4.18
2139 2595 3.740321 CACCAATTTCACCACCAAAATCG 59.260 43.478 0.00 0.00 0.00 3.34
2177 2633 4.616835 GCAACAAAGTTCATGACCATCCTC 60.617 45.833 0.00 0.00 0.00 3.71
2178 2634 3.256631 GCAACAAAGTTCATGACCATCCT 59.743 43.478 0.00 0.00 0.00 3.24
2200 2658 3.076621 TCATGTGCAAGCTTGAGGTAAG 58.923 45.455 30.39 13.71 39.49 2.34
2256 2715 3.243501 TGCAAGCTTGAGGAAATCAACAC 60.244 43.478 30.39 7.71 43.09 3.32
2320 2993 5.379706 AGCCAAGCTGGAGTAAATCTTAT 57.620 39.130 6.40 0.00 40.96 1.73
2323 2996 3.009473 TCAAGCCAAGCTGGAGTAAATCT 59.991 43.478 6.40 0.00 40.96 2.40
2363 3036 4.136051 CAACCAAGTTCATGGCCATTTTT 58.864 39.130 17.92 5.21 44.75 1.94
2367 3040 2.307496 TCAACCAAGTTCATGGCCAT 57.693 45.000 14.09 14.09 44.75 4.40
2478 3152 9.490379 CCTCCGTAAACTAATATAAGAGCATTT 57.510 33.333 0.00 0.00 0.00 2.32
2479 3153 8.095169 CCCTCCGTAAACTAATATAAGAGCATT 58.905 37.037 0.00 0.00 0.00 3.56
2480 3154 7.453752 TCCCTCCGTAAACTAATATAAGAGCAT 59.546 37.037 0.00 0.00 0.00 3.79
2481 3155 6.779049 TCCCTCCGTAAACTAATATAAGAGCA 59.221 38.462 0.00 0.00 0.00 4.26
2482 3156 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
2483 3157 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2484 3158 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
2485 3159 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
2488 3162 9.072375 GTTAGTACTCCCTCCGTAAACTAATAT 57.928 37.037 0.00 0.00 0.00 1.28
2489 3163 8.275040 AGTTAGTACTCCCTCCGTAAACTAATA 58.725 37.037 0.00 0.00 0.00 0.98
2490 3164 7.122048 AGTTAGTACTCCCTCCGTAAACTAAT 58.878 38.462 0.00 0.00 0.00 1.73
2491 3165 6.485171 AGTTAGTACTCCCTCCGTAAACTAA 58.515 40.000 0.00 0.00 0.00 2.24
2492 3166 6.067217 AGTTAGTACTCCCTCCGTAAACTA 57.933 41.667 0.00 0.00 0.00 2.24
2493 3167 4.928263 AGTTAGTACTCCCTCCGTAAACT 58.072 43.478 0.00 0.00 0.00 2.66
2494 3168 6.759497 TTAGTTAGTACTCCCTCCGTAAAC 57.241 41.667 0.00 0.00 35.78 2.01
2495 3169 6.322201 CCATTAGTTAGTACTCCCTCCGTAAA 59.678 42.308 0.00 0.00 35.78 2.01
2496 3170 5.829924 CCATTAGTTAGTACTCCCTCCGTAA 59.170 44.000 0.00 0.00 35.78 3.18
2497 3171 5.103940 ACCATTAGTTAGTACTCCCTCCGTA 60.104 44.000 0.00 0.00 35.78 4.02
2498 3172 4.213513 CCATTAGTTAGTACTCCCTCCGT 58.786 47.826 0.00 0.00 35.78 4.69
2499 3173 4.213513 ACCATTAGTTAGTACTCCCTCCG 58.786 47.826 0.00 0.00 35.78 4.63
2500 3174 5.424573 ACAACCATTAGTTAGTACTCCCTCC 59.575 44.000 0.00 0.00 36.18 4.30
2501 3175 6.541934 ACAACCATTAGTTAGTACTCCCTC 57.458 41.667 0.00 0.00 36.18 4.30
2502 3176 6.708285 CAACAACCATTAGTTAGTACTCCCT 58.292 40.000 0.00 0.00 36.18 4.20
2503 3177 5.353400 GCAACAACCATTAGTTAGTACTCCC 59.647 44.000 0.00 0.00 36.18 4.30
2504 3178 6.171213 AGCAACAACCATTAGTTAGTACTCC 58.829 40.000 0.00 0.00 36.18 3.85
2505 3179 6.872020 TGAGCAACAACCATTAGTTAGTACTC 59.128 38.462 0.00 0.00 36.18 2.59
2506 3180 6.649557 GTGAGCAACAACCATTAGTTAGTACT 59.350 38.462 0.00 0.00 36.18 2.73
2507 3181 6.649557 AGTGAGCAACAACCATTAGTTAGTAC 59.350 38.462 0.00 0.00 36.18 2.73
2508 3182 6.649141 CAGTGAGCAACAACCATTAGTTAGTA 59.351 38.462 0.00 0.00 36.18 1.82
2509 3183 5.470098 CAGTGAGCAACAACCATTAGTTAGT 59.530 40.000 0.00 0.00 36.18 2.24
2510 3184 5.700832 TCAGTGAGCAACAACCATTAGTTAG 59.299 40.000 0.00 0.00 36.18 2.34
2511 3185 5.616270 TCAGTGAGCAACAACCATTAGTTA 58.384 37.500 0.00 0.00 36.18 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.