Multiple sequence alignment - TraesCS7B01G079800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G079800 chr7B 100.000 4121 0 0 1 4121 89790195 89786075 0.000000e+00 7611.0
1 TraesCS7B01G079800 chr7B 91.176 2278 134 29 1149 3379 89920062 89917805 0.000000e+00 3031.0
2 TraesCS7B01G079800 chr7B 90.914 2036 140 20 1376 3379 89885690 89883668 0.000000e+00 2693.0
3 TraesCS7B01G079800 chr7B 89.052 1224 63 31 194 1391 89892382 89891204 0.000000e+00 1452.0
4 TraesCS7B01G079800 chr7B 92.386 788 58 2 2353 3139 89912298 89911512 0.000000e+00 1122.0
5 TraesCS7B01G079800 chr7B 80.738 732 68 35 453 1127 89920845 89920130 1.710000e-138 503.0
6 TraesCS7B01G079800 chr7B 95.161 248 10 2 3875 4121 150064548 150064302 1.390000e-104 390.0
7 TraesCS7B01G079800 chr7B 94.388 196 10 1 1 196 89862881 89862687 2.410000e-77 300.0
8 TraesCS7B01G079800 chr7B 83.505 291 24 7 3388 3675 89883546 89883277 2.460000e-62 250.0
9 TraesCS7B01G079800 chr7B 82.292 288 27 11 3388 3675 89907841 89907578 1.150000e-55 228.0
10 TraesCS7B01G079800 chr7A 89.093 2558 202 53 731 3232 128776920 128774384 0.000000e+00 3107.0
11 TraesCS7B01G079800 chr7A 86.512 215 15 6 3673 3873 128758447 128758233 1.490000e-54 224.0
12 TraesCS7B01G079800 chr7A 90.741 54 0 2 596 648 128777241 128777192 2.660000e-07 67.6
13 TraesCS7B01G079800 chr7D 90.517 2225 133 36 1175 3341 128748413 128746209 0.000000e+00 2868.0
14 TraesCS7B01G079800 chr7D 88.844 2241 159 46 1175 3357 128480595 128478388 0.000000e+00 2669.0
15 TraesCS7B01G079800 chr7D 92.906 1452 92 8 1789 3232 128143291 128141843 0.000000e+00 2100.0
16 TraesCS7B01G079800 chr7D 88.843 959 69 20 194 1127 128481617 128480672 0.000000e+00 1144.0
17 TraesCS7B01G079800 chr7D 88.705 965 69 18 194 1127 128145488 128144533 0.000000e+00 1142.0
18 TraesCS7B01G079800 chr7D 80.663 724 68 36 453 1127 128749203 128748503 2.860000e-136 496.0
19 TraesCS7B01G079800 chr7D 86.279 481 35 20 2909 3364 128472153 128471679 1.030000e-135 494.0
20 TraesCS7B01G079800 chr7D 84.413 494 40 10 2902 3364 128745605 128745118 6.280000e-123 451.0
21 TraesCS7B01G079800 chr7D 95.149 268 13 0 1461 1728 128143778 128143511 1.370000e-114 424.0
22 TraesCS7B01G079800 chr7D 95.968 248 8 2 3875 4121 73111943 73112189 6.420000e-108 401.0
23 TraesCS7B01G079800 chr7D 91.633 251 17 1 1136 1386 128144489 128144243 1.100000e-90 344.0
24 TraesCS7B01G079800 chr7D 83.062 307 22 13 3059 3341 128744299 128743999 6.840000e-63 252.0
25 TraesCS7B01G079800 chr6B 79.630 1458 242 29 1468 2891 585327725 585329161 0.000000e+00 996.0
26 TraesCS7B01G079800 chr6B 93.878 196 11 1 1 196 303416163 303416357 1.120000e-75 294.0
27 TraesCS7B01G079800 chr6D 77.085 1043 198 30 1871 2891 391563932 391564955 7.730000e-157 564.0
28 TraesCS7B01G079800 chr6D 78.464 599 115 11 2300 2891 391688532 391689123 3.010000e-101 379.0
29 TraesCS7B01G079800 chr6D 90.079 252 20 3 1468 1718 391694136 391694383 5.140000e-84 322.0
30 TraesCS7B01G079800 chr6A 76.567 1037 214 22 1871 2891 537866814 537867837 3.620000e-150 542.0
31 TraesCS7B01G079800 chr6A 81.299 508 76 14 1216 1718 537874261 537874754 1.070000e-105 394.0
32 TraesCS7B01G079800 chr5B 93.117 247 14 3 3877 4121 672447185 672446940 3.920000e-95 359.0
33 TraesCS7B01G079800 chr5B 93.089 246 14 3 3877 4121 672479534 672479291 1.410000e-94 357.0
34 TraesCS7B01G079800 chr5B 94.359 195 10 1 2 196 331879799 331879606 8.660000e-77 298.0
35 TraesCS7B01G079800 chr5B 93.878 196 11 1 1 196 49855787 49855981 1.120000e-75 294.0
36 TraesCS7B01G079800 chr3D 92.032 251 17 3 3872 4121 254742671 254742423 2.360000e-92 350.0
37 TraesCS7B01G079800 chr3D 81.818 132 17 7 3673 3800 480362578 480362450 2.030000e-18 104.0
38 TraesCS7B01G079800 chr3D 80.000 150 21 8 3673 3818 480285624 480285480 7.290000e-18 102.0
39 TraesCS7B01G079800 chr4A 90.763 249 19 4 3875 4121 41936150 41935904 3.070000e-86 329.0
40 TraesCS7B01G079800 chr3A 90.650 246 19 4 3877 4121 644993926 644993684 1.430000e-84 324.0
41 TraesCS7B01G079800 chr3A 79.433 141 22 7 3681 3815 623358205 623358066 4.390000e-15 93.5
42 TraesCS7B01G079800 chr3A 79.545 132 20 7 3673 3800 623338140 623338012 2.040000e-13 87.9
43 TraesCS7B01G079800 chr3A 81.250 80 8 7 313 387 387848960 387849037 1.600000e-04 58.4
44 TraesCS7B01G079800 chr2A 90.400 250 19 5 3874 4121 768268167 768268413 1.430000e-84 324.0
45 TraesCS7B01G079800 chr2A 90.000 120 10 2 3389 3507 764138482 764138600 1.980000e-33 154.0
46 TraesCS7B01G079800 chr5D 90.079 252 19 6 3872 4121 100058090 100058337 5.140000e-84 322.0
47 TraesCS7B01G079800 chr5D 94.872 195 9 1 2 196 248836995 248836802 1.860000e-78 303.0
48 TraesCS7B01G079800 chr3B 94.898 196 9 1 1 196 115958709 115958903 5.180000e-79 305.0
49 TraesCS7B01G079800 chr3B 79.104 134 19 9 3673 3800 640699488 640699358 2.640000e-12 84.2
50 TraesCS7B01G079800 chr3B 92.857 42 3 0 3686 3727 640705586 640705545 1.240000e-05 62.1
51 TraesCS7B01G079800 chr4B 94.359 195 10 1 2 196 387665621 387665428 8.660000e-77 298.0
52 TraesCS7B01G079800 chr2B 94.330 194 10 1 3 196 276467839 276467647 3.110000e-76 296.0
53 TraesCS7B01G079800 chr2B 93.878 196 11 1 1 196 457989873 457989679 1.120000e-75 294.0
54 TraesCS7B01G079800 chrUn 93.023 43 3 0 294 336 30105160 30105118 3.440000e-06 63.9
55 TraesCS7B01G079800 chr1D 94.286 35 2 0 1959 1993 23247993 23248027 2.000000e-03 54.7
56 TraesCS7B01G079800 chr1A 94.286 35 2 0 1959 1993 24339349 24339383 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G079800 chr7B 89786075 89790195 4120 True 7611.00 7611 100.00000 1 4121 1 chr7B.!!$R1 4120
1 TraesCS7B01G079800 chr7B 89917805 89920845 3040 True 1767.00 3031 85.95700 453 3379 2 chr7B.!!$R7 2926
2 TraesCS7B01G079800 chr7B 89883277 89885690 2413 True 1471.50 2693 87.20950 1376 3675 2 chr7B.!!$R5 2299
3 TraesCS7B01G079800 chr7B 89891204 89892382 1178 True 1452.00 1452 89.05200 194 1391 1 chr7B.!!$R3 1197
4 TraesCS7B01G079800 chr7B 89907578 89912298 4720 True 675.00 1122 87.33900 2353 3675 2 chr7B.!!$R6 1322
5 TraesCS7B01G079800 chr7A 128774384 128777241 2857 True 1587.30 3107 89.91700 596 3232 2 chr7A.!!$R2 2636
6 TraesCS7B01G079800 chr7D 128478388 128481617 3229 True 1906.50 2669 88.84350 194 3357 2 chr7D.!!$R3 3163
7 TraesCS7B01G079800 chr7D 128743999 128749203 5204 True 1016.75 2868 84.66375 453 3364 4 chr7D.!!$R4 2911
8 TraesCS7B01G079800 chr7D 128141843 128145488 3645 True 1002.50 2100 92.09825 194 3232 4 chr7D.!!$R2 3038
9 TraesCS7B01G079800 chr6B 585327725 585329161 1436 False 996.00 996 79.63000 1468 2891 1 chr6B.!!$F2 1423
10 TraesCS7B01G079800 chr6D 391563932 391564955 1023 False 564.00 564 77.08500 1871 2891 1 chr6D.!!$F1 1020
11 TraesCS7B01G079800 chr6D 391688532 391689123 591 False 379.00 379 78.46400 2300 2891 1 chr6D.!!$F2 591
12 TraesCS7B01G079800 chr6A 537866814 537867837 1023 False 542.00 542 76.56700 1871 2891 1 chr6A.!!$F1 1020

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
79 80 0.108424 GCAGAGCAGGACTAGGTGTG 60.108 60.0 0.00 0.00 0.00 3.82 F
122 123 0.179148 CTTGGGTAAAATTCGCCGGC 60.179 55.0 19.07 19.07 0.00 6.13 F
1066 1370 0.321298 GTTAGCGCTGGGAGTTTCCA 60.321 55.0 22.90 0.00 38.64 3.53 F
1262 1631 1.127343 GGCTATGCAAGGAGAGGACT 58.873 55.0 0.00 0.00 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1408 1777 0.107654 AGCGGATGGTTACTTCCAGC 60.108 55.000 5.91 8.62 42.40 4.85 R
1457 2226 0.320334 CACCATGCCTGTGTACACGA 60.320 55.000 20.61 9.35 0.00 4.35 R
2419 3383 1.081509 CGCATGTTTCGTTGGGTGG 60.082 57.895 0.00 0.00 0.00 4.61 R
3145 6407 1.337447 GGCTTGATTGTGCTGCACATT 60.337 47.619 33.25 28.90 44.16 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.540314 CTCAAGGAGCATCTTGTAGCT 57.460 47.619 15.48 0.00 43.25 3.32
28 29 4.662468 CTCAAGGAGCATCTTGTAGCTA 57.338 45.455 15.48 0.00 43.25 3.32
29 30 4.367450 CTCAAGGAGCATCTTGTAGCTAC 58.633 47.826 17.30 17.30 43.25 3.58
33 34 2.869192 GGAGCATCTTGTAGCTACTTGC 59.131 50.000 23.84 23.11 42.04 4.01
34 35 3.431486 GGAGCATCTTGTAGCTACTTGCT 60.431 47.826 28.10 28.10 45.64 3.91
35 36 5.503116 GGAGCATCTTGTAGCTACTTGCTG 61.503 50.000 30.57 22.17 44.16 4.41
36 37 7.636859 GGAGCATCTTGTAGCTACTTGCTGA 62.637 48.000 30.57 19.82 44.16 4.26
37 38 8.847363 GGAGCATCTTGTAGCTACTTGCTGAT 62.847 46.154 30.57 21.19 44.16 2.90
48 49 6.857777 GCTACTTGCTGATTTAGTGATCAT 57.142 37.500 0.00 0.00 35.62 2.45
49 50 6.656945 GCTACTTGCTGATTTAGTGATCATG 58.343 40.000 0.00 0.00 35.62 3.07
50 51 5.496133 ACTTGCTGATTTAGTGATCATGC 57.504 39.130 0.00 0.00 35.62 4.06
51 52 4.034858 ACTTGCTGATTTAGTGATCATGCG 59.965 41.667 0.00 0.00 35.62 4.73
52 53 2.874086 TGCTGATTTAGTGATCATGCGG 59.126 45.455 0.00 0.00 35.62 5.69
53 54 3.133691 GCTGATTTAGTGATCATGCGGA 58.866 45.455 0.00 0.00 35.62 5.54
54 55 3.186001 GCTGATTTAGTGATCATGCGGAG 59.814 47.826 0.00 0.00 35.62 4.63
55 56 4.625028 CTGATTTAGTGATCATGCGGAGA 58.375 43.478 0.00 0.00 35.62 3.71
56 57 4.371786 TGATTTAGTGATCATGCGGAGAC 58.628 43.478 0.00 0.00 31.35 3.36
57 58 2.890808 TTAGTGATCATGCGGAGACC 57.109 50.000 0.00 0.00 0.00 3.85
58 59 1.040646 TAGTGATCATGCGGAGACCC 58.959 55.000 0.00 0.00 0.00 4.46
59 60 0.689080 AGTGATCATGCGGAGACCCT 60.689 55.000 0.00 0.00 0.00 4.34
60 61 0.531532 GTGATCATGCGGAGACCCTG 60.532 60.000 0.00 0.00 0.00 4.45
61 62 1.596477 GATCATGCGGAGACCCTGC 60.596 63.158 0.00 0.00 34.23 4.85
62 63 2.315781 GATCATGCGGAGACCCTGCA 62.316 60.000 0.00 0.00 42.72 4.41
63 64 2.321263 ATCATGCGGAGACCCTGCAG 62.321 60.000 6.78 6.78 42.17 4.41
64 65 2.685017 ATGCGGAGACCCTGCAGA 60.685 61.111 17.39 0.00 42.17 4.26
65 66 2.729479 ATGCGGAGACCCTGCAGAG 61.729 63.158 17.39 3.79 42.17 3.35
66 67 4.828925 GCGGAGACCCTGCAGAGC 62.829 72.222 17.39 3.64 33.96 4.09
67 68 3.385384 CGGAGACCCTGCAGAGCA 61.385 66.667 17.39 0.00 36.92 4.26
76 77 4.874521 TGCAGAGCAGGACTAGGT 57.125 55.556 0.00 0.00 33.32 3.08
77 78 2.280835 TGCAGAGCAGGACTAGGTG 58.719 57.895 0.00 0.00 33.32 4.00
78 79 0.542938 TGCAGAGCAGGACTAGGTGT 60.543 55.000 0.00 0.00 33.32 4.16
79 80 0.108424 GCAGAGCAGGACTAGGTGTG 60.108 60.000 0.00 0.00 0.00 3.82
80 81 1.261480 CAGAGCAGGACTAGGTGTGT 58.739 55.000 0.00 0.00 0.00 3.72
81 82 1.620819 CAGAGCAGGACTAGGTGTGTT 59.379 52.381 0.00 0.00 0.00 3.32
82 83 2.826128 CAGAGCAGGACTAGGTGTGTTA 59.174 50.000 0.00 0.00 0.00 2.41
83 84 3.449018 CAGAGCAGGACTAGGTGTGTTAT 59.551 47.826 0.00 0.00 0.00 1.89
84 85 3.702045 AGAGCAGGACTAGGTGTGTTATC 59.298 47.826 0.00 0.00 0.00 1.75
85 86 3.702045 GAGCAGGACTAGGTGTGTTATCT 59.298 47.826 0.00 0.00 0.00 1.98
86 87 3.702045 AGCAGGACTAGGTGTGTTATCTC 59.298 47.826 0.00 0.00 0.00 2.75
87 88 3.181474 GCAGGACTAGGTGTGTTATCTCC 60.181 52.174 0.00 0.00 0.00 3.71
88 89 4.282496 CAGGACTAGGTGTGTTATCTCCT 58.718 47.826 0.00 0.00 35.77 3.69
89 90 5.446860 CAGGACTAGGTGTGTTATCTCCTA 58.553 45.833 0.00 0.00 33.97 2.94
91 92 4.828387 GGACTAGGTGTGTTATCTCCTAGG 59.172 50.000 19.15 0.82 46.91 3.02
92 93 5.398809 GGACTAGGTGTGTTATCTCCTAGGA 60.399 48.000 11.98 11.98 46.91 2.94
93 94 5.697067 ACTAGGTGTGTTATCTCCTAGGAG 58.303 45.833 30.15 30.15 46.91 3.69
100 101 4.206418 TCTCCTAGGAGAGCCCCA 57.794 61.111 33.59 13.97 45.26 4.96
101 102 2.421317 TCTCCTAGGAGAGCCCCAA 58.579 57.895 33.59 13.24 45.26 4.12
102 103 0.716591 TCTCCTAGGAGAGCCCCAAA 59.283 55.000 33.59 12.50 45.26 3.28
103 104 0.833949 CTCCTAGGAGAGCCCCAAAC 59.166 60.000 31.97 0.00 44.53 2.93
104 105 0.417841 TCCTAGGAGAGCCCCAAACT 59.582 55.000 7.62 0.00 34.66 2.66
105 106 1.203440 TCCTAGGAGAGCCCCAAACTT 60.203 52.381 7.62 0.00 34.66 2.66
106 107 1.065126 CCTAGGAGAGCCCCAAACTTG 60.065 57.143 1.05 0.00 34.66 3.16
119 120 3.322369 CCAAACTTGGGTAAAATTCGCC 58.678 45.455 0.09 0.00 44.70 5.54
120 121 2.983803 CAAACTTGGGTAAAATTCGCCG 59.016 45.455 0.00 0.00 0.00 6.46
121 122 1.170442 ACTTGGGTAAAATTCGCCGG 58.830 50.000 0.00 0.00 0.00 6.13
122 123 0.179148 CTTGGGTAAAATTCGCCGGC 60.179 55.000 19.07 19.07 0.00 6.13
123 124 1.924320 TTGGGTAAAATTCGCCGGCG 61.924 55.000 42.13 42.13 41.35 6.46
124 125 2.400962 GGGTAAAATTCGCCGGCGT 61.401 57.895 44.16 29.30 40.74 5.68
125 126 1.226184 GGTAAAATTCGCCGGCGTG 60.226 57.895 44.16 22.01 40.74 5.34
126 127 1.866059 GTAAAATTCGCCGGCGTGC 60.866 57.895 44.16 26.70 40.74 5.34
127 128 2.325835 TAAAATTCGCCGGCGTGCA 61.326 52.632 44.16 30.42 40.74 4.57
128 129 1.649390 TAAAATTCGCCGGCGTGCAT 61.649 50.000 44.16 31.15 40.74 3.96
129 130 3.681961 AAATTCGCCGGCGTGCATG 62.682 57.895 44.16 19.59 40.74 4.06
134 135 4.166011 GCCGGCGTGCATGTCTTC 62.166 66.667 12.58 0.00 0.00 2.87
135 136 3.853330 CCGGCGTGCATGTCTTCG 61.853 66.667 9.20 7.41 0.00 3.79
136 137 4.505217 CGGCGTGCATGTCTTCGC 62.505 66.667 9.20 8.80 46.42 4.70
138 139 3.121030 GCGTGCATGTCTTCGCCT 61.121 61.111 7.93 0.00 42.33 5.52
139 140 2.680913 GCGTGCATGTCTTCGCCTT 61.681 57.895 7.93 0.00 42.33 4.35
140 141 1.358725 GCGTGCATGTCTTCGCCTTA 61.359 55.000 7.93 0.00 42.33 2.69
141 142 1.290203 CGTGCATGTCTTCGCCTTAT 58.710 50.000 0.00 0.00 0.00 1.73
142 143 1.258982 CGTGCATGTCTTCGCCTTATC 59.741 52.381 0.00 0.00 0.00 1.75
143 144 1.599542 GTGCATGTCTTCGCCTTATCC 59.400 52.381 0.00 0.00 0.00 2.59
144 145 1.230324 GCATGTCTTCGCCTTATCCC 58.770 55.000 0.00 0.00 0.00 3.85
145 146 1.502231 CATGTCTTCGCCTTATCCCG 58.498 55.000 0.00 0.00 0.00 5.14
146 147 1.120530 ATGTCTTCGCCTTATCCCGT 58.879 50.000 0.00 0.00 0.00 5.28
147 148 0.899720 TGTCTTCGCCTTATCCCGTT 59.100 50.000 0.00 0.00 0.00 4.44
148 149 1.276989 TGTCTTCGCCTTATCCCGTTT 59.723 47.619 0.00 0.00 0.00 3.60
149 150 1.931841 GTCTTCGCCTTATCCCGTTTC 59.068 52.381 0.00 0.00 0.00 2.78
150 151 1.829222 TCTTCGCCTTATCCCGTTTCT 59.171 47.619 0.00 0.00 0.00 2.52
151 152 3.025978 TCTTCGCCTTATCCCGTTTCTA 58.974 45.455 0.00 0.00 0.00 2.10
152 153 3.067742 TCTTCGCCTTATCCCGTTTCTAG 59.932 47.826 0.00 0.00 0.00 2.43
153 154 1.684983 TCGCCTTATCCCGTTTCTAGG 59.315 52.381 0.00 0.00 0.00 3.02
154 155 1.872653 CGCCTTATCCCGTTTCTAGGC 60.873 57.143 0.00 0.00 43.60 3.93
155 156 1.140252 GCCTTATCCCGTTTCTAGGCA 59.860 52.381 0.00 0.00 45.73 4.75
156 157 2.835027 CCTTATCCCGTTTCTAGGCAC 58.165 52.381 0.00 0.00 0.00 5.01
157 158 2.484947 CCTTATCCCGTTTCTAGGCACC 60.485 54.545 0.00 0.00 0.00 5.01
158 159 0.748450 TATCCCGTTTCTAGGCACCG 59.252 55.000 0.00 0.00 0.00 4.94
159 160 1.968050 ATCCCGTTTCTAGGCACCGG 61.968 60.000 0.00 0.00 38.39 5.28
160 161 2.818274 CCGTTTCTAGGCACCGGC 60.818 66.667 0.00 0.00 40.13 6.13
161 162 3.186047 CGTTTCTAGGCACCGGCG 61.186 66.667 0.00 0.00 42.47 6.46
162 163 2.263540 GTTTCTAGGCACCGGCGA 59.736 61.111 9.30 0.00 42.47 5.54
163 164 1.153429 GTTTCTAGGCACCGGCGAT 60.153 57.895 9.30 0.00 42.47 4.58
164 165 1.153449 TTTCTAGGCACCGGCGATG 60.153 57.895 9.30 0.65 42.47 3.84
165 166 1.895020 TTTCTAGGCACCGGCGATGT 61.895 55.000 9.30 0.00 42.47 3.06
166 167 2.279517 CTAGGCACCGGCGATGTC 60.280 66.667 9.30 1.25 42.47 3.06
167 168 2.758327 TAGGCACCGGCGATGTCT 60.758 61.111 15.08 15.08 42.47 3.41
168 169 2.298158 CTAGGCACCGGCGATGTCTT 62.298 60.000 16.20 0.00 42.47 3.01
169 170 1.038681 TAGGCACCGGCGATGTCTTA 61.039 55.000 16.20 0.00 42.47 2.10
170 171 2.171725 GGCACCGGCGATGTCTTAC 61.172 63.158 9.30 0.00 42.47 2.34
171 172 1.153628 GCACCGGCGATGTCTTACT 60.154 57.895 9.30 0.00 0.00 2.24
172 173 1.421410 GCACCGGCGATGTCTTACTG 61.421 60.000 9.30 0.00 0.00 2.74
173 174 0.806102 CACCGGCGATGTCTTACTGG 60.806 60.000 9.30 0.00 34.56 4.00
174 175 1.883084 CCGGCGATGTCTTACTGGC 60.883 63.158 9.30 0.00 0.00 4.85
175 176 1.141881 CGGCGATGTCTTACTGGCT 59.858 57.895 0.00 0.00 0.00 4.75
176 177 0.872021 CGGCGATGTCTTACTGGCTC 60.872 60.000 0.00 0.00 0.00 4.70
177 178 0.530870 GGCGATGTCTTACTGGCTCC 60.531 60.000 0.00 0.00 0.00 4.70
178 179 0.530870 GCGATGTCTTACTGGCTCCC 60.531 60.000 0.00 0.00 0.00 4.30
179 180 0.824109 CGATGTCTTACTGGCTCCCA 59.176 55.000 0.00 0.00 0.00 4.37
180 181 1.471676 CGATGTCTTACTGGCTCCCAC 60.472 57.143 0.00 0.00 0.00 4.61
181 182 1.555075 GATGTCTTACTGGCTCCCACA 59.445 52.381 0.00 0.00 0.00 4.17
182 183 1.429930 TGTCTTACTGGCTCCCACAA 58.570 50.000 0.00 0.00 0.00 3.33
183 184 1.985159 TGTCTTACTGGCTCCCACAAT 59.015 47.619 0.00 0.00 0.00 2.71
184 185 2.290260 TGTCTTACTGGCTCCCACAATG 60.290 50.000 0.00 0.00 0.00 2.82
185 186 2.027192 GTCTTACTGGCTCCCACAATGA 60.027 50.000 0.00 0.00 0.00 2.57
186 187 2.846206 TCTTACTGGCTCCCACAATGAT 59.154 45.455 0.00 0.00 0.00 2.45
187 188 3.266772 TCTTACTGGCTCCCACAATGATT 59.733 43.478 0.00 0.00 0.00 2.57
188 189 4.473196 TCTTACTGGCTCCCACAATGATTA 59.527 41.667 0.00 0.00 0.00 1.75
189 190 3.287867 ACTGGCTCCCACAATGATTAG 57.712 47.619 0.00 0.00 0.00 1.73
190 191 1.952296 CTGGCTCCCACAATGATTAGC 59.048 52.381 0.00 0.00 0.00 3.09
191 192 1.322442 GGCTCCCACAATGATTAGCC 58.678 55.000 0.59 0.59 42.40 3.93
192 193 1.322442 GCTCCCACAATGATTAGCCC 58.678 55.000 0.00 0.00 0.00 5.19
197 198 2.669781 CCACAATGATTAGCCCACCAT 58.330 47.619 0.00 0.00 0.00 3.55
202 203 6.183360 CCACAATGATTAGCCCACCATAAATT 60.183 38.462 0.00 0.00 0.00 1.82
204 205 7.769970 CACAATGATTAGCCCACCATAAATTTT 59.230 33.333 0.00 0.00 0.00 1.82
211 212 4.162131 AGCCCACCATAAATTTTAGCTTGG 59.838 41.667 0.00 5.95 0.00 3.61
356 359 7.009550 ACTACATACTGGATGAGATGAGTGAT 58.990 38.462 6.92 0.00 39.06 3.06
522 534 8.365210 CGTGTTGATTTTCTGATTAATTTTCGG 58.635 33.333 0.00 0.00 0.00 4.30
774 1021 6.321945 AGCTAATCATATGAAACCATGCACAA 59.678 34.615 9.99 0.00 0.00 3.33
831 1103 6.101296 CCTCCCCATATGACCTATAAATACCC 59.899 46.154 3.65 0.00 0.00 3.69
886 1159 4.711355 CCATCCATCCCACACATTAGTTTT 59.289 41.667 0.00 0.00 0.00 2.43
891 1164 5.476599 CCATCCCACACATTAGTTTTCAGAA 59.523 40.000 0.00 0.00 0.00 3.02
1020 1324 4.717280 GGCATGGGTATAGCTAAGATACCT 59.283 45.833 19.17 3.06 45.61 3.08
1023 1327 5.011982 TGGGTATAGCTAAGATACCTGCT 57.988 43.478 19.17 0.00 45.61 4.24
1066 1370 0.321298 GTTAGCGCTGGGAGTTTCCA 60.321 55.000 22.90 0.00 38.64 3.53
1127 1431 6.875948 TTTCTTTGTAAGTCTGCTTGCATA 57.124 33.333 0.00 0.00 44.53 3.14
1128 1432 5.862924 TCTTTGTAAGTCTGCTTGCATAC 57.137 39.130 3.39 3.39 44.53 2.39
1129 1433 4.695455 TCTTTGTAAGTCTGCTTGCATACC 59.305 41.667 7.37 0.00 44.53 2.73
1165 1531 7.899178 TTTATCCTAACATGTACATATGCCG 57.101 36.000 8.32 0.00 0.00 5.69
1169 1535 5.069914 TCCTAACATGTACATATGCCGTCTT 59.930 40.000 8.32 0.00 0.00 3.01
1170 1536 6.265876 TCCTAACATGTACATATGCCGTCTTA 59.734 38.462 8.32 0.00 0.00 2.10
1171 1537 6.926826 CCTAACATGTACATATGCCGTCTTAA 59.073 38.462 8.32 0.00 0.00 1.85
1172 1538 7.602644 CCTAACATGTACATATGCCGTCTTAAT 59.397 37.037 8.32 0.00 0.00 1.40
1173 1539 7.801716 AACATGTACATATGCCGTCTTAATT 57.198 32.000 8.32 0.00 0.00 1.40
1247 1616 2.233922 GGAGAGCAACTACACAAGGCTA 59.766 50.000 0.00 0.00 34.44 3.93
1262 1631 1.127343 GGCTATGCAAGGAGAGGACT 58.873 55.000 0.00 0.00 0.00 3.85
1274 1643 4.621269 AGGACTGTCCTCACCGTT 57.379 55.556 23.49 0.00 45.66 4.44
1305 1674 1.152312 CCCGGCCCTACCATCTACT 60.152 63.158 0.00 0.00 39.03 2.57
1386 1755 5.116882 CCATCCACTGGTAAGTTAGTTAGC 58.883 45.833 2.38 2.38 40.49 3.09
1392 1761 2.907696 TGGTAAGTTAGTTAGCCTGGCA 59.092 45.455 22.65 3.92 38.20 4.92
1397 1766 1.203994 GTTAGTTAGCCTGGCAGTCGA 59.796 52.381 22.65 3.70 0.00 4.20
1398 1767 1.776662 TAGTTAGCCTGGCAGTCGAT 58.223 50.000 22.65 0.61 0.00 3.59
1408 1777 3.081133 CAGTCGATCGGCCGTTTG 58.919 61.111 27.15 21.07 0.00 2.93
1415 1784 1.982073 GATCGGCCGTTTGCTGGAAG 61.982 60.000 27.15 0.00 46.96 3.46
1436 1811 6.183360 GGAAGTAACCATCCGCTAAACTTAAC 60.183 42.308 0.00 0.00 0.00 2.01
1441 1816 5.176592 ACCATCCGCTAAACTTAACTTCTC 58.823 41.667 0.00 0.00 0.00 2.87
1451 2220 3.043586 ACTTAACTTCTCGCGCGATATG 58.956 45.455 34.86 28.04 0.00 1.78
1457 2226 2.699251 TCTCGCGCGATATGTATGTT 57.301 45.000 34.86 0.00 0.00 2.71
1728 2640 7.307042 CCGTCATACTCGGTATATAATACTCCG 60.307 44.444 3.02 3.02 42.62 4.63
2419 3383 4.329545 TCAACGTGCTCCCCTGCC 62.330 66.667 0.00 0.00 0.00 4.85
2433 3397 1.826054 CTGCCCACCCAACGAAACA 60.826 57.895 0.00 0.00 0.00 2.83
2488 3458 1.581934 CCTCAACAACGTCAGCTTCA 58.418 50.000 0.00 0.00 0.00 3.02
2534 3504 1.452651 CCTACTACCGCTCCGTCCA 60.453 63.158 0.00 0.00 0.00 4.02
2793 3766 3.706373 GAGCAGAAGGACCCGGCA 61.706 66.667 0.00 0.00 0.00 5.69
2803 3776 0.542805 GGACCCGGCAACCTATAACA 59.457 55.000 0.00 0.00 0.00 2.41
2922 3899 8.565379 TCATATTCATGTTTTGGGCTATGCCTT 61.565 37.037 8.56 0.00 39.88 4.35
3000 3977 3.380320 GCTCTTGTTTAGGTGTGTGGTTT 59.620 43.478 0.00 0.00 0.00 3.27
3017 3994 4.008330 TGGTTTATGCATTGCCATTTTGG 58.992 39.130 3.54 0.00 41.55 3.28
3101 4078 0.539438 AAAATGTTGCCTCCGCCTCA 60.539 50.000 0.00 0.00 0.00 3.86
3102 4079 0.962356 AAATGTTGCCTCCGCCTCAG 60.962 55.000 0.00 0.00 0.00 3.35
3129 4106 5.381184 TGCCTACCTGCTAAATAATCCAA 57.619 39.130 0.00 0.00 0.00 3.53
3134 4111 5.535753 ACCTGCTAAATAATCCAAATGGC 57.464 39.130 0.00 0.00 34.44 4.40
3141 6403 6.260714 GCTAAATAATCCAAATGGCAAAAGGG 59.739 38.462 0.00 0.00 34.44 3.95
3145 6407 2.969628 TCCAAATGGCAAAAGGGAGAA 58.030 42.857 0.00 0.00 34.44 2.87
3251 6540 5.453903 GCATAGTTGAGACCCATGTGACTAT 60.454 44.000 0.00 0.00 31.12 2.12
3257 6546 6.620877 TGAGACCCATGTGACTATAAGTTT 57.379 37.500 0.00 0.00 0.00 2.66
3264 6553 9.582648 ACCCATGTGACTATAAGTTTAGTTTTT 57.417 29.630 0.00 0.00 32.59 1.94
3285 6576 1.470098 CTTTCCGTTTGGCTGGATGAG 59.530 52.381 0.00 0.00 33.42 2.90
3293 6584 4.378459 CGTTTGGCTGGATGAGAAAGTAAC 60.378 45.833 0.00 0.00 0.00 2.50
3379 6675 6.281848 TCGAATATTTGTAATCTTGTCGCC 57.718 37.500 2.57 0.00 0.00 5.54
3380 6676 5.051307 TCGAATATTTGTAATCTTGTCGCCG 60.051 40.000 2.57 0.00 0.00 6.46
3382 6678 3.740044 ATTTGTAATCTTGTCGCCGTG 57.260 42.857 0.00 0.00 0.00 4.94
3386 6682 2.029200 TGTAATCTTGTCGCCGTGGTTA 60.029 45.455 0.00 0.00 0.00 2.85
3437 7848 4.437390 CGTGGCACAAACTTAGGATCATTC 60.437 45.833 19.09 0.00 44.16 2.67
3446 7857 8.598041 ACAAACTTAGGATCATTCTGTTAGACT 58.402 33.333 0.00 0.00 0.00 3.24
3453 7864 5.293079 GGATCATTCTGTTAGACTGTTGAGC 59.707 44.000 0.00 0.00 0.00 4.26
3469 7880 6.704493 ACTGTTGAGCTGTTAAATAAACGAGA 59.296 34.615 0.00 0.00 41.30 4.04
3470 7881 7.225931 ACTGTTGAGCTGTTAAATAAACGAGAA 59.774 33.333 0.00 0.00 41.30 2.87
3471 7882 7.921787 TGTTGAGCTGTTAAATAAACGAGAAA 58.078 30.769 0.00 0.00 41.30 2.52
3472 7883 7.853929 TGTTGAGCTGTTAAATAAACGAGAAAC 59.146 33.333 0.00 0.00 41.30 2.78
3473 7884 6.894828 TGAGCTGTTAAATAAACGAGAAACC 58.105 36.000 0.00 0.00 41.30 3.27
3474 7885 6.483974 TGAGCTGTTAAATAAACGAGAAACCA 59.516 34.615 0.00 0.00 41.30 3.67
3475 7886 6.899114 AGCTGTTAAATAAACGAGAAACCAG 58.101 36.000 0.00 0.00 41.30 4.00
3476 7887 6.708949 AGCTGTTAAATAAACGAGAAACCAGA 59.291 34.615 0.00 0.00 41.30 3.86
3477 7888 7.227910 AGCTGTTAAATAAACGAGAAACCAGAA 59.772 33.333 0.00 0.00 41.30 3.02
3478 7889 7.858879 GCTGTTAAATAAACGAGAAACCAGAAA 59.141 33.333 0.00 0.00 41.30 2.52
3479 7890 9.724839 CTGTTAAATAAACGAGAAACCAGAAAA 57.275 29.630 0.00 0.00 41.30 2.29
3480 7891 9.724839 TGTTAAATAAACGAGAAACCAGAAAAG 57.275 29.630 0.00 0.00 41.30 2.27
3481 7892 8.688184 GTTAAATAAACGAGAAACCAGAAAAGC 58.312 33.333 0.00 0.00 0.00 3.51
3482 7893 6.635030 AATAAACGAGAAACCAGAAAAGCT 57.365 33.333 0.00 0.00 0.00 3.74
3483 7894 3.971032 AACGAGAAACCAGAAAAGCTG 57.029 42.857 0.00 0.00 44.49 4.24
3484 7895 1.604278 ACGAGAAACCAGAAAAGCTGC 59.396 47.619 0.00 0.00 43.50 5.25
3485 7896 1.603802 CGAGAAACCAGAAAAGCTGCA 59.396 47.619 1.02 0.00 43.50 4.41
3486 7897 2.033299 CGAGAAACCAGAAAAGCTGCAA 59.967 45.455 1.02 0.00 43.50 4.08
3487 7898 3.375642 GAGAAACCAGAAAAGCTGCAAC 58.624 45.455 1.02 0.00 43.50 4.17
3527 7938 7.770897 ACAAAATACTCTCTCTCTCTCTCTCTC 59.229 40.741 0.00 0.00 0.00 3.20
3528 7939 7.682787 AAATACTCTCTCTCTCTCTCTCTCT 57.317 40.000 0.00 0.00 0.00 3.10
3529 7940 6.909550 ATACTCTCTCTCTCTCTCTCTCTC 57.090 45.833 0.00 0.00 0.00 3.20
3530 7941 4.877773 ACTCTCTCTCTCTCTCTCTCTCT 58.122 47.826 0.00 0.00 0.00 3.10
3531 7942 4.892934 ACTCTCTCTCTCTCTCTCTCTCTC 59.107 50.000 0.00 0.00 0.00 3.20
3532 7943 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
3533 7944 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3534 7945 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3535 7946 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3536 7947 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3537 7948 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3538 7949 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3539 7950 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3540 7951 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3544 7955 5.089970 TCTCTCTCTCTCTCTCTCTTGTG 57.910 47.826 0.00 0.00 0.00 3.33
3545 7956 4.532126 TCTCTCTCTCTCTCTCTCTTGTGT 59.468 45.833 0.00 0.00 0.00 3.72
3546 7957 4.578871 TCTCTCTCTCTCTCTCTTGTGTG 58.421 47.826 0.00 0.00 0.00 3.82
3560 7972 3.132111 TCTTGTGTGTGTGTGAGCTTCTA 59.868 43.478 0.00 0.00 0.00 2.10
3583 7995 8.023706 TCTACATCGATCAGCTACAACATATTC 58.976 37.037 0.00 0.00 0.00 1.75
3589 8001 7.598869 TCGATCAGCTACAACATATTCCATTAC 59.401 37.037 0.00 0.00 0.00 1.89
3618 8030 8.458573 TTCCGGTTATATGCATTATTGTCTTT 57.541 30.769 3.54 0.00 0.00 2.52
3663 8075 5.534207 ACTTTTGCATCATGGAGTTCAAA 57.466 34.783 0.00 0.00 0.00 2.69
3664 8076 6.105397 ACTTTTGCATCATGGAGTTCAAAT 57.895 33.333 0.00 0.00 0.00 2.32
3700 8112 9.811995 ATGTTCCAATGAGATTTGATTGTATTG 57.188 29.630 0.00 0.00 0.00 1.90
3704 8116 9.022884 TCCAATGAGATTTGATTGTATTGAACA 57.977 29.630 0.00 0.00 35.88 3.18
3705 8117 9.811995 CCAATGAGATTTGATTGTATTGAACAT 57.188 29.630 0.00 0.00 38.10 2.71
3830 9223 8.321650 TCATAAATGAATGGAAAACCTTTTGC 57.678 30.769 0.00 0.00 35.18 3.68
3833 9226 7.643569 AAATGAATGGAAAACCTTTTGCTTT 57.356 28.000 4.01 3.86 38.99 3.51
3834 9227 6.622833 ATGAATGGAAAACCTTTTGCTTTG 57.377 33.333 7.56 0.00 38.99 2.77
3835 9228 4.335037 TGAATGGAAAACCTTTTGCTTTGC 59.665 37.500 7.56 0.00 38.99 3.68
3836 9229 3.340814 TGGAAAACCTTTTGCTTTGCA 57.659 38.095 4.01 0.00 38.99 4.08
3837 9230 3.883669 TGGAAAACCTTTTGCTTTGCAT 58.116 36.364 4.01 0.00 38.76 3.96
3839 9232 3.627123 GGAAAACCTTTTGCTTTGCATGT 59.373 39.130 0.00 0.00 38.76 3.21
3840 9233 4.096231 GGAAAACCTTTTGCTTTGCATGTT 59.904 37.500 0.00 0.00 38.76 2.71
3841 9234 4.880886 AAACCTTTTGCTTTGCATGTTC 57.119 36.364 0.00 0.00 38.76 3.18
3842 9235 3.540314 ACCTTTTGCTTTGCATGTTCA 57.460 38.095 0.00 0.00 38.76 3.18
3844 9237 2.803956 CCTTTTGCTTTGCATGTTCAGG 59.196 45.455 0.00 0.00 38.76 3.86
3845 9238 3.460103 CTTTTGCTTTGCATGTTCAGGT 58.540 40.909 0.00 0.00 38.76 4.00
3846 9239 2.512485 TTGCTTTGCATGTTCAGGTG 57.488 45.000 0.00 0.00 38.76 4.00
3847 9240 1.689984 TGCTTTGCATGTTCAGGTGA 58.310 45.000 0.00 0.00 31.71 4.02
3849 9242 1.610522 GCTTTGCATGTTCAGGTGACT 59.389 47.619 0.00 0.00 46.44 3.41
3850 9243 2.035066 GCTTTGCATGTTCAGGTGACTT 59.965 45.455 0.00 0.00 40.21 3.01
3851 9244 3.635331 CTTTGCATGTTCAGGTGACTTG 58.365 45.455 0.00 0.00 40.21 3.16
3852 9245 1.608055 TGCATGTTCAGGTGACTTGG 58.392 50.000 0.00 0.00 40.21 3.61
3853 9246 1.133823 TGCATGTTCAGGTGACTTGGT 60.134 47.619 0.00 0.00 40.21 3.67
3854 9247 1.537202 GCATGTTCAGGTGACTTGGTC 59.463 52.381 0.00 0.00 40.21 4.02
3855 9248 1.800586 CATGTTCAGGTGACTTGGTCG 59.199 52.381 0.00 0.00 40.21 4.79
3857 9250 0.531974 GTTCAGGTGACTTGGTCGCA 60.532 55.000 12.27 0.00 43.87 5.10
3858 9251 0.396435 TTCAGGTGACTTGGTCGCAT 59.604 50.000 12.27 3.41 43.87 4.73
3860 9253 0.603707 CAGGTGACTTGGTCGCATGT 60.604 55.000 14.84 0.00 45.60 3.21
3861 9254 0.108585 AGGTGACTTGGTCGCATGTT 59.891 50.000 12.27 0.00 43.87 2.71
3862 9255 0.238289 GGTGACTTGGTCGCATGTTG 59.762 55.000 12.27 0.00 43.87 3.33
3864 9257 1.195448 GTGACTTGGTCGCATGTTGAG 59.805 52.381 6.39 0.00 41.96 3.02
3865 9258 1.069978 TGACTTGGTCGCATGTTGAGA 59.930 47.619 0.00 0.00 34.95 3.27
3866 9259 1.728971 GACTTGGTCGCATGTTGAGAG 59.271 52.381 0.00 0.00 0.00 3.20
3867 9260 1.344438 ACTTGGTCGCATGTTGAGAGA 59.656 47.619 0.00 0.00 0.00 3.10
3869 9262 2.542020 TGGTCGCATGTTGAGAGAAA 57.458 45.000 0.00 0.00 0.00 2.52
3870 9263 3.057969 TGGTCGCATGTTGAGAGAAAT 57.942 42.857 0.00 0.00 0.00 2.17
3872 9265 4.574892 TGGTCGCATGTTGAGAGAAATAA 58.425 39.130 0.00 0.00 0.00 1.40
3874 9267 4.631813 GGTCGCATGTTGAGAGAAATAAGT 59.368 41.667 0.00 0.00 0.00 2.24
3875 9268 5.122396 GGTCGCATGTTGAGAGAAATAAGTT 59.878 40.000 0.00 0.00 0.00 2.66
3876 9269 6.312918 GGTCGCATGTTGAGAGAAATAAGTTA 59.687 38.462 0.00 0.00 0.00 2.24
3879 9272 6.238211 CGCATGTTGAGAGAAATAAGTTAGGG 60.238 42.308 0.00 0.00 0.00 3.53
3880 9273 6.599638 GCATGTTGAGAGAAATAAGTTAGGGT 59.400 38.462 0.00 0.00 0.00 4.34
3881 9274 7.414540 GCATGTTGAGAGAAATAAGTTAGGGTG 60.415 40.741 0.00 0.00 0.00 4.61
3882 9275 7.074653 TGTTGAGAGAAATAAGTTAGGGTGT 57.925 36.000 0.00 0.00 0.00 4.16
3885 9278 7.074653 TGAGAGAAATAAGTTAGGGTGTGTT 57.925 36.000 0.00 0.00 0.00 3.32
3887 9280 7.444183 TGAGAGAAATAAGTTAGGGTGTGTTTG 59.556 37.037 0.00 0.00 0.00 2.93
3888 9281 6.715264 AGAGAAATAAGTTAGGGTGTGTTTGG 59.285 38.462 0.00 0.00 0.00 3.28
3889 9282 5.773176 AGAAATAAGTTAGGGTGTGTTTGGG 59.227 40.000 0.00 0.00 0.00 4.12
3890 9283 5.327737 AATAAGTTAGGGTGTGTTTGGGA 57.672 39.130 0.00 0.00 0.00 4.37
3892 9285 1.202891 AGTTAGGGTGTGTTTGGGAGC 60.203 52.381 0.00 0.00 0.00 4.70
3893 9286 1.145571 TTAGGGTGTGTTTGGGAGCT 58.854 50.000 0.00 0.00 0.00 4.09
3894 9287 1.145571 TAGGGTGTGTTTGGGAGCTT 58.854 50.000 0.00 0.00 0.00 3.74
3896 9289 1.497286 AGGGTGTGTTTGGGAGCTTAA 59.503 47.619 0.00 0.00 0.00 1.85
3900 9293 4.332828 GGTGTGTTTGGGAGCTTAAGTAT 58.667 43.478 4.02 0.00 0.00 2.12
3901 9294 4.765339 GGTGTGTTTGGGAGCTTAAGTATT 59.235 41.667 4.02 0.00 0.00 1.89
3902 9295 5.243060 GGTGTGTTTGGGAGCTTAAGTATTT 59.757 40.000 4.02 0.00 0.00 1.40
3906 9299 7.068839 TGTGTTTGGGAGCTTAAGTATTTTTGA 59.931 33.333 4.02 0.00 0.00 2.69
3908 9301 8.141268 TGTTTGGGAGCTTAAGTATTTTTGAAG 58.859 33.333 4.02 0.00 0.00 3.02
3909 9302 7.833285 TTGGGAGCTTAAGTATTTTTGAAGT 57.167 32.000 4.02 0.00 0.00 3.01
3910 9303 7.833285 TGGGAGCTTAAGTATTTTTGAAGTT 57.167 32.000 4.02 0.00 0.00 2.66
3912 9305 8.700973 TGGGAGCTTAAGTATTTTTGAAGTTTT 58.299 29.630 4.02 0.00 0.00 2.43
3914 9307 9.529325 GGAGCTTAAGTATTTTTGAAGTTTTGT 57.471 29.630 4.02 0.00 0.00 2.83
3928 9321 6.597562 TGAAGTTTTGTAGGAATACTGTGGT 58.402 36.000 0.00 0.00 0.00 4.16
3929 9322 7.057894 TGAAGTTTTGTAGGAATACTGTGGTT 58.942 34.615 0.00 0.00 0.00 3.67
3932 9325 7.287810 AGTTTTGTAGGAATACTGTGGTTTCT 58.712 34.615 0.00 0.00 0.00 2.52
3937 9330 9.629878 TTGTAGGAATACTGTGGTTTCTAAAAA 57.370 29.630 0.00 0.00 0.00 1.94
3970 9363 9.840427 CAGTATTAAATACTTTGAGGTGTTTGG 57.160 33.333 0.00 0.00 43.27 3.28
3971 9364 9.802039 AGTATTAAATACTTTGAGGTGTTTGGA 57.198 29.630 0.00 0.00 43.27 3.53
3976 9369 8.934023 AAATACTTTGAGGTGTTTGGATAGAA 57.066 30.769 0.00 0.00 31.25 2.10
3978 9371 8.934023 ATACTTTGAGGTGTTTGGATAGAAAA 57.066 30.769 0.00 0.00 0.00 2.29
3979 9372 7.654022 ACTTTGAGGTGTTTGGATAGAAAAA 57.346 32.000 0.00 0.00 0.00 1.94
4000 9393 7.924103 AAAAATACTGCAGTTTAAGAAACCG 57.076 32.000 27.06 0.00 42.34 4.44
4006 9399 6.461640 ACTGCAGTTTAAGAAACCGTAGTAT 58.538 36.000 15.25 0.00 41.07 2.12
4007 9400 6.589139 ACTGCAGTTTAAGAAACCGTAGTATC 59.411 38.462 15.25 0.00 41.07 2.24
4008 9401 6.694447 TGCAGTTTAAGAAACCGTAGTATCT 58.306 36.000 0.00 0.00 42.34 1.98
4009 9402 6.810182 TGCAGTTTAAGAAACCGTAGTATCTC 59.190 38.462 0.00 0.00 42.34 2.75
4010 9403 7.034397 GCAGTTTAAGAAACCGTAGTATCTCT 58.966 38.462 0.00 0.00 42.34 3.10
4011 9404 8.186821 GCAGTTTAAGAAACCGTAGTATCTCTA 58.813 37.037 0.00 0.00 42.34 2.43
4017 9410 8.983307 AAGAAACCGTAGTATCTCTAAAACTG 57.017 34.615 0.00 0.00 0.00 3.16
4020 9413 6.205101 ACCGTAGTATCTCTAAAACTGTGG 57.795 41.667 0.00 0.00 0.00 4.17
4021 9414 5.713861 ACCGTAGTATCTCTAAAACTGTGGT 59.286 40.000 0.00 0.00 31.28 4.16
4022 9415 6.886459 ACCGTAGTATCTCTAAAACTGTGGTA 59.114 38.462 0.00 0.00 33.17 3.25
4023 9416 7.559170 ACCGTAGTATCTCTAAAACTGTGGTAT 59.441 37.037 0.00 0.00 33.17 2.73
4024 9417 8.411683 CCGTAGTATCTCTAAAACTGTGGTATT 58.588 37.037 0.00 0.00 0.00 1.89
4050 9443 9.810545 TTTTGTAGTATTTGAAAAAGAGGTTGG 57.189 29.630 0.00 0.00 0.00 3.77
4052 9445 7.064229 TGTAGTATTTGAAAAAGAGGTTGGGT 58.936 34.615 0.00 0.00 0.00 4.51
4053 9446 6.650427 AGTATTTGAAAAAGAGGTTGGGTC 57.350 37.500 0.00 0.00 0.00 4.46
4054 9447 4.955811 ATTTGAAAAAGAGGTTGGGTCC 57.044 40.909 0.00 0.00 0.00 4.46
4056 9449 3.680777 TGAAAAAGAGGTTGGGTCCTT 57.319 42.857 0.00 0.00 38.02 3.36
4057 9450 3.989056 TGAAAAAGAGGTTGGGTCCTTT 58.011 40.909 0.00 0.00 38.02 3.11
4059 9452 4.780554 TGAAAAAGAGGTTGGGTCCTTTTT 59.219 37.500 10.31 10.31 45.72 1.94
4081 9474 4.364415 TTTCAAAACTGAGAAACGGTGG 57.636 40.909 0.00 0.00 38.23 4.61
4082 9475 1.673920 TCAAAACTGAGAAACGGTGGC 59.326 47.619 0.00 0.00 38.23 5.01
4083 9476 1.676006 CAAAACTGAGAAACGGTGGCT 59.324 47.619 0.00 0.00 38.23 4.75
4084 9477 1.594331 AAACTGAGAAACGGTGGCTC 58.406 50.000 0.00 4.16 38.23 4.70
4085 9478 0.468226 AACTGAGAAACGGTGGCTCA 59.532 50.000 11.26 11.26 38.23 4.26
4086 9479 0.687354 ACTGAGAAACGGTGGCTCAT 59.313 50.000 11.94 3.16 37.95 2.90
4087 9480 1.072331 ACTGAGAAACGGTGGCTCATT 59.928 47.619 11.94 5.85 37.95 2.57
4088 9481 1.466167 CTGAGAAACGGTGGCTCATTG 59.534 52.381 11.94 1.30 37.95 2.82
4089 9482 0.804989 GAGAAACGGTGGCTCATTGG 59.195 55.000 5.84 0.00 0.00 3.16
4098 9491 4.555610 GCTCATTGGCCTCCTGAG 57.444 61.111 19.39 19.39 39.50 3.35
4100 9493 0.463474 GCTCATTGGCCTCCTGAGTC 60.463 60.000 22.43 14.87 38.88 3.36
4101 9494 0.179936 CTCATTGGCCTCCTGAGTCC 59.820 60.000 16.87 0.00 33.34 3.85
4102 9495 0.547471 TCATTGGCCTCCTGAGTCCA 60.547 55.000 3.32 0.00 0.00 4.02
4104 9497 0.842635 ATTGGCCTCCTGAGTCCATC 59.157 55.000 3.32 0.00 0.00 3.51
4105 9498 0.252881 TTGGCCTCCTGAGTCCATCT 60.253 55.000 3.32 0.00 0.00 2.90
4107 9500 0.467804 GGCCTCCTGAGTCCATCTTC 59.532 60.000 0.00 0.00 0.00 2.87
4109 9502 1.836802 GCCTCCTGAGTCCATCTTCTT 59.163 52.381 0.00 0.00 0.00 2.52
4110 9503 3.034635 GCCTCCTGAGTCCATCTTCTTA 58.965 50.000 0.00 0.00 0.00 2.10
4111 9504 3.645687 GCCTCCTGAGTCCATCTTCTTAT 59.354 47.826 0.00 0.00 0.00 1.73
4112 9505 4.502950 GCCTCCTGAGTCCATCTTCTTATG 60.503 50.000 0.00 0.00 0.00 1.90
4114 9507 5.221422 CCTCCTGAGTCCATCTTCTTATGAC 60.221 48.000 0.00 0.00 0.00 3.06
4115 9508 4.651503 TCCTGAGTCCATCTTCTTATGACC 59.348 45.833 0.00 0.00 0.00 4.02
4116 9509 4.406972 CCTGAGTCCATCTTCTTATGACCA 59.593 45.833 0.00 0.00 0.00 4.02
4118 9511 6.409005 CCTGAGTCCATCTTCTTATGACCAAT 60.409 42.308 0.00 0.00 0.00 3.16
4119 9512 7.202038 CCTGAGTCCATCTTCTTATGACCAATA 60.202 40.741 0.00 0.00 0.00 1.90
4120 9513 7.500992 TGAGTCCATCTTCTTATGACCAATAC 58.499 38.462 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.540314 AGCTACAAGATGCTCCTTGAG 57.460 47.619 20.21 14.72 44.66 3.02
8 9 4.026744 AGTAGCTACAAGATGCTCCTTGA 58.973 43.478 25.28 7.64 44.66 3.02
9 10 4.399004 AGTAGCTACAAGATGCTCCTTG 57.601 45.455 25.28 14.29 46.61 3.61
10 11 4.764172 CAAGTAGCTACAAGATGCTCCTT 58.236 43.478 25.28 4.39 40.35 3.36
11 12 3.431486 GCAAGTAGCTACAAGATGCTCCT 60.431 47.826 25.28 0.00 40.35 3.69
12 13 2.869192 GCAAGTAGCTACAAGATGCTCC 59.131 50.000 25.28 3.73 40.35 4.70
25 26 6.656945 CATGATCACTAAATCAGCAAGTAGC 58.343 40.000 0.00 0.00 38.96 3.58
26 27 6.563567 CGCATGATCACTAAATCAGCAAGTAG 60.564 42.308 0.00 0.00 38.96 2.57
27 28 5.234972 CGCATGATCACTAAATCAGCAAGTA 59.765 40.000 0.00 0.00 38.96 2.24
28 29 4.034858 CGCATGATCACTAAATCAGCAAGT 59.965 41.667 0.00 0.00 38.96 3.16
29 30 4.524749 CGCATGATCACTAAATCAGCAAG 58.475 43.478 0.00 0.00 38.96 4.01
30 31 3.313249 CCGCATGATCACTAAATCAGCAA 59.687 43.478 0.00 0.00 38.96 3.91
31 32 2.874086 CCGCATGATCACTAAATCAGCA 59.126 45.455 0.00 0.00 38.96 4.41
32 33 3.133691 TCCGCATGATCACTAAATCAGC 58.866 45.455 0.00 0.00 38.96 4.26
33 34 4.447054 GTCTCCGCATGATCACTAAATCAG 59.553 45.833 0.00 0.00 38.96 2.90
34 35 4.371786 GTCTCCGCATGATCACTAAATCA 58.628 43.478 0.00 0.00 39.85 2.57
35 36 3.743396 GGTCTCCGCATGATCACTAAATC 59.257 47.826 0.00 0.00 0.00 2.17
36 37 3.495100 GGGTCTCCGCATGATCACTAAAT 60.495 47.826 0.00 0.00 0.00 1.40
37 38 2.158957 GGGTCTCCGCATGATCACTAAA 60.159 50.000 0.00 0.00 0.00 1.85
38 39 1.412710 GGGTCTCCGCATGATCACTAA 59.587 52.381 0.00 0.00 0.00 2.24
39 40 1.040646 GGGTCTCCGCATGATCACTA 58.959 55.000 0.00 0.00 0.00 2.74
40 41 0.689080 AGGGTCTCCGCATGATCACT 60.689 55.000 0.00 0.00 38.33 3.41
41 42 0.531532 CAGGGTCTCCGCATGATCAC 60.532 60.000 0.00 0.00 38.33 3.06
42 43 1.825341 CAGGGTCTCCGCATGATCA 59.175 57.895 0.00 0.00 38.33 2.92
43 44 1.596477 GCAGGGTCTCCGCATGATC 60.596 63.158 0.00 0.00 38.33 2.92
44 45 2.321263 CTGCAGGGTCTCCGCATGAT 62.321 60.000 5.57 0.00 40.05 2.45
45 46 3.002583 TGCAGGGTCTCCGCATGA 61.003 61.111 0.00 0.00 37.54 3.07
46 47 2.513204 CTGCAGGGTCTCCGCATG 60.513 66.667 5.57 0.00 40.05 4.06
47 48 2.685017 TCTGCAGGGTCTCCGCAT 60.685 61.111 15.13 0.00 40.05 4.73
48 49 3.385384 CTCTGCAGGGTCTCCGCA 61.385 66.667 15.13 0.00 39.14 5.69
49 50 4.828925 GCTCTGCAGGGTCTCCGC 62.829 72.222 16.66 2.78 38.33 5.54
50 51 3.385384 TGCTCTGCAGGGTCTCCG 61.385 66.667 16.66 0.00 38.33 4.63
59 60 0.542938 ACACCTAGTCCTGCTCTGCA 60.543 55.000 0.00 0.00 36.92 4.41
60 61 0.108424 CACACCTAGTCCTGCTCTGC 60.108 60.000 0.00 0.00 0.00 4.26
61 62 1.261480 ACACACCTAGTCCTGCTCTG 58.739 55.000 0.00 0.00 0.00 3.35
62 63 2.016905 AACACACCTAGTCCTGCTCT 57.983 50.000 0.00 0.00 0.00 4.09
63 64 3.702045 AGATAACACACCTAGTCCTGCTC 59.298 47.826 0.00 0.00 0.00 4.26
64 65 3.702045 GAGATAACACACCTAGTCCTGCT 59.298 47.826 0.00 0.00 0.00 4.24
65 66 3.181474 GGAGATAACACACCTAGTCCTGC 60.181 52.174 0.00 0.00 0.00 4.85
66 67 4.282496 AGGAGATAACACACCTAGTCCTG 58.718 47.826 0.00 0.00 31.82 3.86
67 68 4.611564 AGGAGATAACACACCTAGTCCT 57.388 45.455 0.00 0.00 0.00 3.85
68 69 4.828387 CCTAGGAGATAACACACCTAGTCC 59.172 50.000 1.05 0.00 45.95 3.85
69 70 5.692928 TCCTAGGAGATAACACACCTAGTC 58.307 45.833 7.62 0.00 45.95 2.59
70 71 5.432390 TCTCCTAGGAGATAACACACCTAGT 59.568 44.000 33.59 0.00 45.95 2.57
71 72 5.942961 TCTCCTAGGAGATAACACACCTAG 58.057 45.833 33.59 7.89 45.26 3.02
72 73 5.988865 TCTCCTAGGAGATAACACACCTA 57.011 43.478 33.59 10.54 45.26 3.08
73 74 4.883021 TCTCCTAGGAGATAACACACCT 57.117 45.455 33.59 0.00 45.26 4.00
84 85 0.833949 GTTTGGGGCTCTCCTAGGAG 59.166 60.000 30.15 30.15 43.21 3.69
85 86 0.417841 AGTTTGGGGCTCTCCTAGGA 59.582 55.000 11.98 11.98 35.33 2.94
86 87 1.065126 CAAGTTTGGGGCTCTCCTAGG 60.065 57.143 0.82 0.82 35.33 3.02
87 88 1.065126 CCAAGTTTGGGGCTCTCCTAG 60.065 57.143 2.87 0.00 44.70 3.02
88 89 0.991920 CCAAGTTTGGGGCTCTCCTA 59.008 55.000 2.87 0.00 44.70 2.94
89 90 1.770324 CCAAGTTTGGGGCTCTCCT 59.230 57.895 2.87 0.00 44.70 3.69
90 91 4.423231 CCAAGTTTGGGGCTCTCC 57.577 61.111 2.87 0.00 44.70 3.71
99 100 2.983803 CGGCGAATTTTACCCAAGTTTG 59.016 45.455 0.00 0.00 0.00 2.93
100 101 2.029739 CCGGCGAATTTTACCCAAGTTT 60.030 45.455 9.30 0.00 0.00 2.66
101 102 1.542472 CCGGCGAATTTTACCCAAGTT 59.458 47.619 9.30 0.00 0.00 2.66
102 103 1.170442 CCGGCGAATTTTACCCAAGT 58.830 50.000 9.30 0.00 0.00 3.16
103 104 0.179148 GCCGGCGAATTTTACCCAAG 60.179 55.000 12.58 0.00 0.00 3.61
104 105 1.884444 GCCGGCGAATTTTACCCAA 59.116 52.632 12.58 0.00 0.00 4.12
105 106 2.400158 CGCCGGCGAATTTTACCCA 61.400 57.895 44.86 0.00 42.83 4.51
106 107 2.405997 CGCCGGCGAATTTTACCC 59.594 61.111 44.86 0.00 42.83 3.69
117 118 4.166011 GAAGACATGCACGCCGGC 62.166 66.667 19.07 19.07 0.00 6.13
118 119 3.853330 CGAAGACATGCACGCCGG 61.853 66.667 0.00 0.00 0.00 6.13
119 120 4.505217 GCGAAGACATGCACGCCG 62.505 66.667 5.89 8.38 44.27 6.46
121 122 1.358725 TAAGGCGAAGACATGCACGC 61.359 55.000 8.46 8.46 39.87 5.34
122 123 1.258982 GATAAGGCGAAGACATGCACG 59.741 52.381 0.00 0.00 39.87 5.34
123 124 1.599542 GGATAAGGCGAAGACATGCAC 59.400 52.381 0.00 0.00 39.87 4.57
124 125 1.475034 GGGATAAGGCGAAGACATGCA 60.475 52.381 0.00 0.00 39.87 3.96
125 126 1.230324 GGGATAAGGCGAAGACATGC 58.770 55.000 0.00 0.00 39.87 4.06
126 127 1.202533 ACGGGATAAGGCGAAGACATG 60.203 52.381 0.00 0.00 39.87 3.21
127 128 1.120530 ACGGGATAAGGCGAAGACAT 58.879 50.000 0.00 0.00 39.87 3.06
128 129 0.899720 AACGGGATAAGGCGAAGACA 59.100 50.000 0.00 0.00 39.87 3.41
129 130 1.931841 GAAACGGGATAAGGCGAAGAC 59.068 52.381 0.00 0.00 0.00 3.01
130 131 1.829222 AGAAACGGGATAAGGCGAAGA 59.171 47.619 0.00 0.00 0.00 2.87
131 132 2.311124 AGAAACGGGATAAGGCGAAG 57.689 50.000 0.00 0.00 0.00 3.79
132 133 2.101917 CCTAGAAACGGGATAAGGCGAA 59.898 50.000 0.00 0.00 0.00 4.70
133 134 1.684983 CCTAGAAACGGGATAAGGCGA 59.315 52.381 0.00 0.00 0.00 5.54
134 135 1.872653 GCCTAGAAACGGGATAAGGCG 60.873 57.143 4.88 0.00 40.06 5.52
135 136 1.880271 GCCTAGAAACGGGATAAGGC 58.120 55.000 4.88 4.88 42.40 4.35
136 137 2.484947 GGTGCCTAGAAACGGGATAAGG 60.485 54.545 0.00 0.00 0.00 2.69
137 138 2.802057 CGGTGCCTAGAAACGGGATAAG 60.802 54.545 0.00 0.00 0.00 1.73
138 139 1.137479 CGGTGCCTAGAAACGGGATAA 59.863 52.381 0.00 0.00 0.00 1.75
139 140 0.748450 CGGTGCCTAGAAACGGGATA 59.252 55.000 0.00 0.00 0.00 2.59
140 141 1.520666 CGGTGCCTAGAAACGGGAT 59.479 57.895 0.00 0.00 0.00 3.85
141 142 2.652095 CCGGTGCCTAGAAACGGGA 61.652 63.158 12.62 0.00 40.79 5.14
142 143 2.125269 CCGGTGCCTAGAAACGGG 60.125 66.667 12.62 9.60 40.79 5.28
143 144 2.818274 GCCGGTGCCTAGAAACGG 60.818 66.667 15.34 15.34 46.78 4.44
144 145 2.901051 ATCGCCGGTGCCTAGAAACG 62.901 60.000 11.05 0.00 0.00 3.60
145 146 1.153429 ATCGCCGGTGCCTAGAAAC 60.153 57.895 11.05 0.00 0.00 2.78
146 147 1.153449 CATCGCCGGTGCCTAGAAA 60.153 57.895 11.05 0.00 0.00 2.52
147 148 2.292794 GACATCGCCGGTGCCTAGAA 62.293 60.000 11.05 0.00 0.00 2.10
148 149 2.758327 ACATCGCCGGTGCCTAGA 60.758 61.111 11.05 0.00 0.00 2.43
149 150 2.279517 GACATCGCCGGTGCCTAG 60.280 66.667 11.05 2.12 0.00 3.02
150 151 1.038681 TAAGACATCGCCGGTGCCTA 61.039 55.000 11.05 0.00 0.00 3.93
151 152 2.355986 TAAGACATCGCCGGTGCCT 61.356 57.895 11.05 1.60 0.00 4.75
152 153 2.171725 GTAAGACATCGCCGGTGCC 61.172 63.158 11.05 0.00 0.00 5.01
153 154 1.153628 AGTAAGACATCGCCGGTGC 60.154 57.895 11.05 0.00 0.00 5.01
154 155 0.806102 CCAGTAAGACATCGCCGGTG 60.806 60.000 9.28 9.28 0.00 4.94
155 156 1.515954 CCAGTAAGACATCGCCGGT 59.484 57.895 1.90 0.00 0.00 5.28
156 157 1.883084 GCCAGTAAGACATCGCCGG 60.883 63.158 0.00 0.00 0.00 6.13
157 158 0.872021 GAGCCAGTAAGACATCGCCG 60.872 60.000 0.00 0.00 0.00 6.46
158 159 0.530870 GGAGCCAGTAAGACATCGCC 60.531 60.000 0.00 0.00 0.00 5.54
159 160 0.530870 GGGAGCCAGTAAGACATCGC 60.531 60.000 0.00 0.00 0.00 4.58
160 161 0.824109 TGGGAGCCAGTAAGACATCG 59.176 55.000 0.00 0.00 0.00 3.84
161 162 1.555075 TGTGGGAGCCAGTAAGACATC 59.445 52.381 0.00 0.00 32.34 3.06
162 163 1.656587 TGTGGGAGCCAGTAAGACAT 58.343 50.000 0.00 0.00 32.34 3.06
163 164 1.429930 TTGTGGGAGCCAGTAAGACA 58.570 50.000 0.00 0.00 32.34 3.41
164 165 2.027192 TCATTGTGGGAGCCAGTAAGAC 60.027 50.000 0.00 0.00 32.34 3.01
165 166 2.265367 TCATTGTGGGAGCCAGTAAGA 58.735 47.619 0.00 0.00 32.34 2.10
166 167 2.787473 TCATTGTGGGAGCCAGTAAG 57.213 50.000 0.00 0.00 32.34 2.34
167 168 3.737559 AATCATTGTGGGAGCCAGTAA 57.262 42.857 0.00 0.00 32.34 2.24
168 169 3.433598 GCTAATCATTGTGGGAGCCAGTA 60.434 47.826 0.00 0.00 32.34 2.74
169 170 2.684927 GCTAATCATTGTGGGAGCCAGT 60.685 50.000 0.00 0.00 32.34 4.00
170 171 1.952296 GCTAATCATTGTGGGAGCCAG 59.048 52.381 0.00 0.00 32.34 4.85
171 172 2.057137 GCTAATCATTGTGGGAGCCA 57.943 50.000 0.00 0.00 0.00 4.75
172 173 1.322442 GGCTAATCATTGTGGGAGCC 58.678 55.000 0.00 0.00 42.45 4.70
173 174 1.322442 GGGCTAATCATTGTGGGAGC 58.678 55.000 0.00 0.00 0.00 4.70
174 175 2.301346 GTGGGCTAATCATTGTGGGAG 58.699 52.381 0.00 0.00 0.00 4.30
175 176 1.064017 GGTGGGCTAATCATTGTGGGA 60.064 52.381 0.00 0.00 0.00 4.37
176 177 1.341877 TGGTGGGCTAATCATTGTGGG 60.342 52.381 0.00 0.00 0.00 4.61
177 178 2.142356 TGGTGGGCTAATCATTGTGG 57.858 50.000 0.00 0.00 0.00 4.17
178 179 5.850557 TTTATGGTGGGCTAATCATTGTG 57.149 39.130 0.00 0.00 0.00 3.33
179 180 7.436320 AAATTTATGGTGGGCTAATCATTGT 57.564 32.000 0.00 0.00 0.00 2.71
180 181 9.480053 CTAAAATTTATGGTGGGCTAATCATTG 57.520 33.333 0.00 0.00 0.00 2.82
181 182 8.150296 GCTAAAATTTATGGTGGGCTAATCATT 58.850 33.333 0.00 0.00 0.00 2.57
182 183 7.510343 AGCTAAAATTTATGGTGGGCTAATCAT 59.490 33.333 0.00 0.00 0.00 2.45
183 184 6.838612 AGCTAAAATTTATGGTGGGCTAATCA 59.161 34.615 0.00 0.00 0.00 2.57
184 185 7.290110 AGCTAAAATTTATGGTGGGCTAATC 57.710 36.000 0.00 0.00 0.00 1.75
185 186 7.418942 CCAAGCTAAAATTTATGGTGGGCTAAT 60.419 37.037 0.00 0.00 0.00 1.73
186 187 6.127196 CCAAGCTAAAATTTATGGTGGGCTAA 60.127 38.462 0.00 0.00 0.00 3.09
187 188 5.362430 CCAAGCTAAAATTTATGGTGGGCTA 59.638 40.000 0.00 0.00 0.00 3.93
188 189 4.162131 CCAAGCTAAAATTTATGGTGGGCT 59.838 41.667 0.00 0.00 0.00 5.19
189 190 4.441792 CCAAGCTAAAATTTATGGTGGGC 58.558 43.478 0.00 0.00 0.00 5.36
190 191 4.441792 GCCAAGCTAAAATTTATGGTGGG 58.558 43.478 10.10 10.10 0.00 4.61
191 192 4.162131 AGGCCAAGCTAAAATTTATGGTGG 59.838 41.667 5.01 5.48 0.00 4.61
192 193 5.111293 CAGGCCAAGCTAAAATTTATGGTG 58.889 41.667 5.01 0.00 0.00 4.17
197 198 5.419239 AATGCAGGCCAAGCTAAAATTTA 57.581 34.783 19.26 0.00 0.00 1.40
202 203 1.550072 GGAAATGCAGGCCAAGCTAAA 59.450 47.619 19.26 1.90 0.00 1.85
204 205 0.039472 TGGAAATGCAGGCCAAGCTA 59.961 50.000 19.26 7.96 0.00 3.32
211 212 2.126346 GCGTGTGGAAATGCAGGC 60.126 61.111 0.00 0.00 38.89 4.85
262 263 6.828785 AGTAGAATTTTGACCACTTTGTGTCT 59.171 34.615 0.00 0.00 0.00 3.41
343 345 5.417754 AGTGTGTTCATCACTCATCTCAT 57.582 39.130 0.00 0.00 46.27 2.90
417 421 3.243975 TGTTACTCCCTCCGTTCAGAAAC 60.244 47.826 0.00 0.00 0.00 2.78
522 534 6.963049 ATCTATCCAAACACACGTACTTTC 57.037 37.500 0.00 0.00 0.00 2.62
831 1103 1.577328 AATTCCAAGCAGACGCACGG 61.577 55.000 0.00 0.00 42.27 4.94
1020 1324 2.890311 CCCAAGTAACCAAATCACAGCA 59.110 45.455 0.00 0.00 0.00 4.41
1023 1327 2.243810 GCCCCAAGTAACCAAATCACA 58.756 47.619 0.00 0.00 0.00 3.58
1144 1499 5.246203 AGACGGCATATGTACATGTTAGGAT 59.754 40.000 18.81 0.00 0.00 3.24
1147 1502 7.940178 TTAAGACGGCATATGTACATGTTAG 57.060 36.000 18.81 7.71 0.00 2.34
1171 1537 8.721478 CCGCAAGTAAGTTTATGATATGCTAAT 58.279 33.333 0.00 0.00 0.00 1.73
1172 1538 7.307751 GCCGCAAGTAAGTTTATGATATGCTAA 60.308 37.037 0.00 0.00 0.00 3.09
1173 1539 6.147164 GCCGCAAGTAAGTTTATGATATGCTA 59.853 38.462 0.00 0.00 0.00 3.49
1195 1561 3.585748 AAATATGATGAACGAACGCCG 57.414 42.857 0.00 0.00 45.44 6.46
1247 1616 0.908198 GGACAGTCCTCTCCTTGCAT 59.092 55.000 12.94 0.00 32.53 3.96
1386 1755 4.899239 GGCCGATCGACTGCCAGG 62.899 72.222 23.66 4.45 45.99 4.45
1392 1761 2.813908 GCAAACGGCCGATCGACT 60.814 61.111 35.90 4.54 36.11 4.18
1397 1766 2.033448 TTCCAGCAAACGGCCGAT 59.967 55.556 35.90 19.90 46.50 4.18
1398 1767 2.102109 TACTTCCAGCAAACGGCCGA 62.102 55.000 35.90 2.60 46.50 5.54
1408 1777 0.107654 AGCGGATGGTTACTTCCAGC 60.108 55.000 5.91 8.62 42.40 4.85
1415 1784 6.592994 AGAAGTTAAGTTTAGCGGATGGTTAC 59.407 38.462 0.00 0.00 0.00 2.50
1436 1811 2.585845 ACATACATATCGCGCGAGAAG 58.414 47.619 36.99 31.14 0.00 2.85
1441 1816 1.050009 ACGAACATACATATCGCGCG 58.950 50.000 26.76 26.76 40.09 6.86
1451 2220 2.679450 TGCCTGTGTACACGAACATAC 58.321 47.619 20.61 6.75 0.00 2.39
1457 2226 0.320334 CACCATGCCTGTGTACACGA 60.320 55.000 20.61 9.35 0.00 4.35
1728 2640 6.799512 AGTTATAAGCATGGATGAAAGCAAC 58.200 36.000 0.00 0.00 0.00 4.17
2261 3225 1.971695 GGAAGGTTGGCAGGGAACG 60.972 63.158 0.00 0.00 0.00 3.95
2335 3299 4.335647 CGGGTGGTCCTTGCTGCT 62.336 66.667 0.00 0.00 0.00 4.24
2419 3383 1.081509 CGCATGTTTCGTTGGGTGG 60.082 57.895 0.00 0.00 0.00 4.61
2534 3504 3.055719 CCGCCTCAAACACGCCAT 61.056 61.111 0.00 0.00 0.00 4.40
2793 3766 2.101917 CGGGTCGACCATGTTATAGGTT 59.898 50.000 34.40 0.00 38.50 3.50
2922 3899 3.500455 TCGCTCCAACGAAATTCGA 57.500 47.368 22.92 0.00 43.74 3.71
3000 3977 2.738000 GCGACCAAAATGGCAATGCATA 60.738 45.455 7.79 0.00 42.67 3.14
3017 3994 3.055719 CCCACACCACATGGCGAC 61.056 66.667 0.00 0.00 39.32 5.19
3101 4078 4.510167 ATTTAGCAGGTAGGCATGTTCT 57.490 40.909 0.00 0.00 35.83 3.01
3102 4079 6.072452 GGATTATTTAGCAGGTAGGCATGTTC 60.072 42.308 0.00 0.00 35.83 3.18
3129 4106 3.557686 GCACATTTCTCCCTTTTGCCATT 60.558 43.478 0.00 0.00 0.00 3.16
3134 4111 2.036217 TGCTGCACATTTCTCCCTTTTG 59.964 45.455 0.00 0.00 0.00 2.44
3141 6403 3.564235 TGATTGTGCTGCACATTTCTC 57.436 42.857 33.25 24.99 44.16 2.87
3145 6407 1.337447 GGCTTGATTGTGCTGCACATT 60.337 47.619 33.25 28.90 44.16 2.71
3238 6527 9.582648 AAAAACTAAACTTATAGTCACATGGGT 57.417 29.630 0.00 0.00 35.09 4.51
3251 6540 7.488792 GCCAAACGGAAAGAAAAACTAAACTTA 59.511 33.333 0.00 0.00 0.00 2.24
3257 6546 4.202070 CCAGCCAAACGGAAAGAAAAACTA 60.202 41.667 0.00 0.00 0.00 2.24
3264 6553 1.073125 TCATCCAGCCAAACGGAAAGA 59.927 47.619 0.00 0.00 34.22 2.52
3267 6556 0.690192 TCTCATCCAGCCAAACGGAA 59.310 50.000 0.00 0.00 34.22 4.30
3269 6558 1.470098 CTTTCTCATCCAGCCAAACGG 59.530 52.381 0.00 0.00 0.00 4.44
3357 6653 5.130519 CGGCGACAAGATTACAAATATTCG 58.869 41.667 0.00 0.00 0.00 3.34
3372 6668 1.376166 CCCATAACCACGGCGACAA 60.376 57.895 16.62 0.00 0.00 3.18
3376 6672 1.891919 CCATCCCATAACCACGGCG 60.892 63.158 4.80 4.80 0.00 6.46
3379 6675 2.542907 GCGCCATCCCATAACCACG 61.543 63.158 0.00 0.00 0.00 4.94
3380 6676 2.542907 CGCGCCATCCCATAACCAC 61.543 63.158 0.00 0.00 0.00 4.16
3382 6678 2.203153 ACGCGCCATCCCATAACC 60.203 61.111 5.73 0.00 0.00 2.85
3437 7848 6.844696 TTTAACAGCTCAACAGTCTAACAG 57.155 37.500 0.00 0.00 0.00 3.16
3446 7857 7.485418 TTCTCGTTTATTTAACAGCTCAACA 57.515 32.000 0.00 0.00 36.50 3.33
3453 7864 9.724839 TTTTCTGGTTTCTCGTTTATTTAACAG 57.275 29.630 0.00 0.00 36.50 3.16
3469 7880 2.497273 ACTGTTGCAGCTTTTCTGGTTT 59.503 40.909 1.17 0.00 43.06 3.27
3470 7881 2.102578 ACTGTTGCAGCTTTTCTGGTT 58.897 42.857 1.17 0.00 43.06 3.67
3471 7882 1.767759 ACTGTTGCAGCTTTTCTGGT 58.232 45.000 1.17 0.00 43.06 4.00
3472 7883 2.466846 CAACTGTTGCAGCTTTTCTGG 58.533 47.619 7.70 0.00 43.06 3.86
3501 7912 7.633789 AGAGAGAGAGAGAGAGAGTATTTTGT 58.366 38.462 0.00 0.00 0.00 2.83
3527 7938 3.820467 ACACACACAAGAGAGAGAGAGAG 59.180 47.826 0.00 0.00 0.00 3.20
3528 7939 3.567585 CACACACACAAGAGAGAGAGAGA 59.432 47.826 0.00 0.00 0.00 3.10
3529 7940 3.317711 ACACACACACAAGAGAGAGAGAG 59.682 47.826 0.00 0.00 0.00 3.20
3530 7941 3.067320 CACACACACACAAGAGAGAGAGA 59.933 47.826 0.00 0.00 0.00 3.10
3531 7942 3.067320 TCACACACACACAAGAGAGAGAG 59.933 47.826 0.00 0.00 0.00 3.20
3532 7943 3.023832 TCACACACACACAAGAGAGAGA 58.976 45.455 0.00 0.00 0.00 3.10
3533 7944 3.379240 CTCACACACACACAAGAGAGAG 58.621 50.000 0.00 0.00 0.00 3.20
3534 7945 2.481969 GCTCACACACACACAAGAGAGA 60.482 50.000 0.00 0.00 0.00 3.10
3535 7946 1.863454 GCTCACACACACACAAGAGAG 59.137 52.381 0.00 0.00 0.00 3.20
3536 7947 1.482182 AGCTCACACACACACAAGAGA 59.518 47.619 0.00 0.00 0.00 3.10
3537 7948 1.945387 AGCTCACACACACACAAGAG 58.055 50.000 0.00 0.00 0.00 2.85
3538 7949 2.093500 AGAAGCTCACACACACACAAGA 60.093 45.455 0.00 0.00 0.00 3.02
3539 7950 2.283298 AGAAGCTCACACACACACAAG 58.717 47.619 0.00 0.00 0.00 3.16
3540 7951 2.401583 AGAAGCTCACACACACACAA 57.598 45.000 0.00 0.00 0.00 3.33
3544 7955 2.663602 CGATGTAGAAGCTCACACACAC 59.336 50.000 0.00 0.00 0.00 3.82
3545 7956 2.556622 TCGATGTAGAAGCTCACACACA 59.443 45.455 0.00 0.00 0.00 3.72
3546 7957 3.217599 TCGATGTAGAAGCTCACACAC 57.782 47.619 0.00 0.00 0.00 3.82
3560 7972 5.928839 GGAATATGTTGTAGCTGATCGATGT 59.071 40.000 0.54 0.00 0.00 3.06
3583 7995 4.331717 GCATATAACCGGAATCCGTAATGG 59.668 45.833 21.12 7.14 46.80 3.16
3618 8030 5.968528 ACACACCTTTTGTACAAGAAACA 57.031 34.783 8.56 0.00 35.67 2.83
3675 8087 9.022884 TCAATACAATCAAATCTCATTGGAACA 57.977 29.630 0.00 0.00 34.77 3.18
3676 8088 9.859427 TTCAATACAATCAAATCTCATTGGAAC 57.141 29.630 0.00 0.00 34.77 3.62
3677 8089 9.859427 GTTCAATACAATCAAATCTCATTGGAA 57.141 29.630 0.00 0.00 34.77 3.53
3678 8090 9.022884 TGTTCAATACAATCAAATCTCATTGGA 57.977 29.630 0.00 0.00 34.77 3.53
3679 8091 9.811995 ATGTTCAATACAATCAAATCTCATTGG 57.188 29.630 0.00 0.00 40.89 3.16
3814 9207 4.268359 TGCAAAGCAAAAGGTTTTCCATT 58.732 34.783 0.00 0.00 37.86 3.16
3815 9208 3.883669 TGCAAAGCAAAAGGTTTTCCAT 58.116 36.364 0.00 0.00 37.86 3.41
3816 9209 3.340814 TGCAAAGCAAAAGGTTTTCCA 57.659 38.095 0.00 0.00 37.86 3.53
3817 9210 3.627123 ACATGCAAAGCAAAAGGTTTTCC 59.373 39.130 0.00 0.00 43.62 3.13
3818 9211 4.880886 ACATGCAAAGCAAAAGGTTTTC 57.119 36.364 0.00 0.00 43.62 2.29
3819 9212 4.699257 TGAACATGCAAAGCAAAAGGTTTT 59.301 33.333 0.00 0.00 43.62 2.43
3822 9215 3.460103 CTGAACATGCAAAGCAAAAGGT 58.540 40.909 0.00 0.00 43.62 3.50
3824 9217 3.246699 CACCTGAACATGCAAAGCAAAAG 59.753 43.478 0.00 0.00 43.62 2.27
3825 9218 3.118847 TCACCTGAACATGCAAAGCAAAA 60.119 39.130 0.00 0.00 43.62 2.44
3826 9219 2.429971 TCACCTGAACATGCAAAGCAAA 59.570 40.909 0.00 0.00 43.62 3.68
3827 9220 2.030371 TCACCTGAACATGCAAAGCAA 58.970 42.857 0.00 0.00 43.62 3.91
3828 9221 1.337703 GTCACCTGAACATGCAAAGCA 59.662 47.619 0.00 0.00 44.86 3.91
3830 9223 3.551454 CCAAGTCACCTGAACATGCAAAG 60.551 47.826 0.00 0.00 0.00 2.77
3833 9226 1.133823 ACCAAGTCACCTGAACATGCA 60.134 47.619 0.00 0.00 0.00 3.96
3834 9227 1.537202 GACCAAGTCACCTGAACATGC 59.463 52.381 0.00 0.00 32.09 4.06
3835 9228 1.800586 CGACCAAGTCACCTGAACATG 59.199 52.381 0.00 0.00 32.09 3.21
3836 9229 1.878102 GCGACCAAGTCACCTGAACAT 60.878 52.381 0.00 0.00 32.09 2.71
3837 9230 0.531974 GCGACCAAGTCACCTGAACA 60.532 55.000 0.00 0.00 32.09 3.18
3839 9232 0.396435 ATGCGACCAAGTCACCTGAA 59.604 50.000 0.00 0.00 32.09 3.02
3840 9233 0.320683 CATGCGACCAAGTCACCTGA 60.321 55.000 0.00 0.00 32.09 3.86
3841 9234 0.603707 ACATGCGACCAAGTCACCTG 60.604 55.000 0.00 0.00 32.09 4.00
3842 9235 0.108585 AACATGCGACCAAGTCACCT 59.891 50.000 0.00 0.00 32.09 4.00
3844 9237 1.195448 CTCAACATGCGACCAAGTCAC 59.805 52.381 0.00 0.00 32.09 3.67
3845 9238 1.069978 TCTCAACATGCGACCAAGTCA 59.930 47.619 0.00 0.00 32.09 3.41
3846 9239 1.728971 CTCTCAACATGCGACCAAGTC 59.271 52.381 0.00 0.00 0.00 3.01
3847 9240 1.344438 TCTCTCAACATGCGACCAAGT 59.656 47.619 0.00 0.00 0.00 3.16
3849 9242 2.542020 TTCTCTCAACATGCGACCAA 57.458 45.000 0.00 0.00 0.00 3.67
3850 9243 2.542020 TTTCTCTCAACATGCGACCA 57.458 45.000 0.00 0.00 0.00 4.02
3851 9244 4.631813 ACTTATTTCTCTCAACATGCGACC 59.368 41.667 0.00 0.00 0.00 4.79
3852 9245 5.786401 ACTTATTTCTCTCAACATGCGAC 57.214 39.130 0.00 0.00 0.00 5.19
3853 9246 6.535150 CCTAACTTATTTCTCTCAACATGCGA 59.465 38.462 0.00 0.00 0.00 5.10
3854 9247 6.238211 CCCTAACTTATTTCTCTCAACATGCG 60.238 42.308 0.00 0.00 0.00 4.73
3855 9248 6.599638 ACCCTAACTTATTTCTCTCAACATGC 59.400 38.462 0.00 0.00 0.00 4.06
3857 9250 7.607991 CACACCCTAACTTATTTCTCTCAACAT 59.392 37.037 0.00 0.00 0.00 2.71
3858 9251 6.934645 CACACCCTAACTTATTTCTCTCAACA 59.065 38.462 0.00 0.00 0.00 3.33
3860 9253 7.074653 ACACACCCTAACTTATTTCTCTCAA 57.925 36.000 0.00 0.00 0.00 3.02
3861 9254 6.681729 ACACACCCTAACTTATTTCTCTCA 57.318 37.500 0.00 0.00 0.00 3.27
3862 9255 7.094762 CCAAACACACCCTAACTTATTTCTCTC 60.095 40.741 0.00 0.00 0.00 3.20
3864 9257 6.072119 CCCAAACACACCCTAACTTATTTCTC 60.072 42.308 0.00 0.00 0.00 2.87
3865 9258 5.773176 CCCAAACACACCCTAACTTATTTCT 59.227 40.000 0.00 0.00 0.00 2.52
3866 9259 5.771165 TCCCAAACACACCCTAACTTATTTC 59.229 40.000 0.00 0.00 0.00 2.17
3867 9260 5.707495 TCCCAAACACACCCTAACTTATTT 58.293 37.500 0.00 0.00 0.00 1.40
3869 9262 4.809691 GCTCCCAAACACACCCTAACTTAT 60.810 45.833 0.00 0.00 0.00 1.73
3870 9263 3.497227 GCTCCCAAACACACCCTAACTTA 60.497 47.826 0.00 0.00 0.00 2.24
3872 9265 1.202891 GCTCCCAAACACACCCTAACT 60.203 52.381 0.00 0.00 0.00 2.24
3874 9267 1.145571 AGCTCCCAAACACACCCTAA 58.854 50.000 0.00 0.00 0.00 2.69
3875 9268 1.145571 AAGCTCCCAAACACACCCTA 58.854 50.000 0.00 0.00 0.00 3.53
3876 9269 1.145571 TAAGCTCCCAAACACACCCT 58.854 50.000 0.00 0.00 0.00 4.34
3879 9272 5.959618 AATACTTAAGCTCCCAAACACAC 57.040 39.130 1.29 0.00 0.00 3.82
3880 9273 6.969993 AAAATACTTAAGCTCCCAAACACA 57.030 33.333 1.29 0.00 0.00 3.72
3881 9274 7.430441 TCAAAAATACTTAAGCTCCCAAACAC 58.570 34.615 1.29 0.00 0.00 3.32
3882 9275 7.589958 TCAAAAATACTTAAGCTCCCAAACA 57.410 32.000 1.29 0.00 0.00 2.83
3885 9278 7.833285 ACTTCAAAAATACTTAAGCTCCCAA 57.167 32.000 1.29 0.00 0.00 4.12
3887 9280 8.978539 CAAAACTTCAAAAATACTTAAGCTCCC 58.021 33.333 1.29 0.00 0.00 4.30
3888 9281 9.529325 ACAAAACTTCAAAAATACTTAAGCTCC 57.471 29.630 1.29 0.00 0.00 4.70
3900 9293 9.796120 CACAGTATTCCTACAAAACTTCAAAAA 57.204 29.630 0.00 0.00 0.00 1.94
3901 9294 8.410141 CCACAGTATTCCTACAAAACTTCAAAA 58.590 33.333 0.00 0.00 0.00 2.44
3902 9295 7.558444 ACCACAGTATTCCTACAAAACTTCAAA 59.442 33.333 0.00 0.00 0.00 2.69
3906 9299 7.778382 AGAAACCACAGTATTCCTACAAAACTT 59.222 33.333 0.00 0.00 0.00 2.66
3908 9301 7.506328 AGAAACCACAGTATTCCTACAAAAC 57.494 36.000 0.00 0.00 0.00 2.43
3909 9302 9.629878 TTTAGAAACCACAGTATTCCTACAAAA 57.370 29.630 0.00 0.00 0.00 2.44
3910 9303 9.629878 TTTTAGAAACCACAGTATTCCTACAAA 57.370 29.630 0.00 0.00 0.00 2.83
3944 9337 9.840427 CCAAACACCTCAAAGTATTTAATACTG 57.160 33.333 17.12 7.94 44.94 2.74
3951 9344 8.934023 TTCTATCCAAACACCTCAAAGTATTT 57.066 30.769 0.00 0.00 40.26 1.40
3952 9345 8.934023 TTTCTATCCAAACACCTCAAAGTATT 57.066 30.769 0.00 0.00 0.00 1.89
3954 9347 8.754991 TTTTTCTATCCAAACACCTCAAAGTA 57.245 30.769 0.00 0.00 0.00 2.24
3955 9348 7.654022 TTTTTCTATCCAAACACCTCAAAGT 57.346 32.000 0.00 0.00 0.00 2.66
3976 9369 7.924103 CGGTTTCTTAAACTGCAGTATTTTT 57.076 32.000 22.01 13.28 40.53 1.94
3992 9385 8.583296 ACAGTTTTAGAGATACTACGGTTTCTT 58.417 33.333 0.00 0.00 34.71 2.52
3993 9386 8.027771 CACAGTTTTAGAGATACTACGGTTTCT 58.972 37.037 0.00 0.00 36.67 2.52
3994 9387 7.275123 CCACAGTTTTAGAGATACTACGGTTTC 59.725 40.741 0.00 0.00 0.00 2.78
3996 9389 6.210185 ACCACAGTTTTAGAGATACTACGGTT 59.790 38.462 0.00 0.00 0.00 4.44
3997 9390 5.713861 ACCACAGTTTTAGAGATACTACGGT 59.286 40.000 0.00 0.00 0.00 4.83
3999 9392 9.798994 AAATACCACAGTTTTAGAGATACTACG 57.201 33.333 0.00 0.00 0.00 3.51
4006 9399 9.841295 ACTACAAAAATACCACAGTTTTAGAGA 57.159 29.630 0.00 0.00 32.89 3.10
4024 9417 9.810545 CCAACCTCTTTTTCAAATACTACAAAA 57.189 29.630 0.00 0.00 0.00 2.44
4026 9419 7.562088 ACCCAACCTCTTTTTCAAATACTACAA 59.438 33.333 0.00 0.00 0.00 2.41
4027 9420 7.064229 ACCCAACCTCTTTTTCAAATACTACA 58.936 34.615 0.00 0.00 0.00 2.74
4029 9422 6.717997 GGACCCAACCTCTTTTTCAAATACTA 59.282 38.462 0.00 0.00 0.00 1.82
4030 9423 5.538813 GGACCCAACCTCTTTTTCAAATACT 59.461 40.000 0.00 0.00 0.00 2.12
4031 9424 5.538813 AGGACCCAACCTCTTTTTCAAATAC 59.461 40.000 0.00 0.00 34.98 1.89
4033 9426 4.556697 AGGACCCAACCTCTTTTTCAAAT 58.443 39.130 0.00 0.00 34.98 2.32
4034 9427 3.989056 AGGACCCAACCTCTTTTTCAAA 58.011 40.909 0.00 0.00 34.98 2.69
4035 9428 3.680777 AGGACCCAACCTCTTTTTCAA 57.319 42.857 0.00 0.00 34.98 2.69
4036 9429 3.680777 AAGGACCCAACCTCTTTTTCA 57.319 42.857 0.00 0.00 39.62 2.69
4037 9430 5.353394 AAAAAGGACCCAACCTCTTTTTC 57.647 39.130 0.00 0.00 42.27 2.29
4059 9452 4.739195 CCACCGTTTCTCAGTTTTGAAAA 58.261 39.130 0.00 0.00 34.52 2.29
4060 9453 3.428316 GCCACCGTTTCTCAGTTTTGAAA 60.428 43.478 0.00 0.00 31.69 2.69
4061 9454 2.098443 GCCACCGTTTCTCAGTTTTGAA 59.902 45.455 0.00 0.00 31.69 2.69
4062 9455 1.673920 GCCACCGTTTCTCAGTTTTGA 59.326 47.619 0.00 0.00 0.00 2.69
4063 9456 1.676006 AGCCACCGTTTCTCAGTTTTG 59.324 47.619 0.00 0.00 0.00 2.44
4065 9458 1.134220 TGAGCCACCGTTTCTCAGTTT 60.134 47.619 0.00 0.00 33.42 2.66
4066 9459 0.468226 TGAGCCACCGTTTCTCAGTT 59.532 50.000 0.00 0.00 33.42 3.16
4067 9460 0.687354 ATGAGCCACCGTTTCTCAGT 59.313 50.000 5.89 0.00 39.82 3.41
4068 9461 1.466167 CAATGAGCCACCGTTTCTCAG 59.534 52.381 5.89 0.00 39.82 3.35
4069 9462 1.522668 CAATGAGCCACCGTTTCTCA 58.477 50.000 2.87 2.87 40.62 3.27
4070 9463 0.804989 CCAATGAGCCACCGTTTCTC 59.195 55.000 0.00 0.00 0.00 2.87
4071 9464 1.244019 GCCAATGAGCCACCGTTTCT 61.244 55.000 0.00 0.00 0.00 2.52
4072 9465 1.212751 GCCAATGAGCCACCGTTTC 59.787 57.895 0.00 0.00 0.00 2.78
4073 9466 3.365535 GCCAATGAGCCACCGTTT 58.634 55.556 0.00 0.00 0.00 3.60
4081 9474 0.463474 GACTCAGGAGGCCAATGAGC 60.463 60.000 24.06 16.12 43.42 4.26
4082 9475 3.776616 GACTCAGGAGGCCAATGAG 57.223 57.895 23.06 23.06 44.81 2.90
4089 9482 1.494960 AGAAGATGGACTCAGGAGGC 58.505 55.000 0.83 0.00 35.10 4.70
4091 9484 5.221422 GGTCATAAGAAGATGGACTCAGGAG 60.221 48.000 0.00 0.00 0.00 3.69
4092 9485 4.651503 GGTCATAAGAAGATGGACTCAGGA 59.348 45.833 0.00 0.00 0.00 3.86
4094 9487 5.604758 TGGTCATAAGAAGATGGACTCAG 57.395 43.478 0.00 0.00 0.00 3.35
4096 9489 7.954788 GTATTGGTCATAAGAAGATGGACTC 57.045 40.000 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.