Multiple sequence alignment - TraesCS7B01G077900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G077900 chr7B 100.000 4392 0 0 1 4392 87197424 87193033 0.000000e+00 8111.0
1 TraesCS7B01G077900 chr7B 80.060 662 89 20 2923 3573 87209550 87208921 6.700000e-123 451.0
2 TraesCS7B01G077900 chr7B 86.667 75 7 3 845 917 20575269 20575342 3.640000e-11 80.5
3 TraesCS7B01G077900 chr7B 86.765 68 5 4 3613 3678 87208904 87208839 6.090000e-09 73.1
4 TraesCS7B01G077900 chr4A 92.408 2213 110 21 968 3130 625763524 625761320 0.000000e+00 3103.0
5 TraesCS7B01G077900 chr4A 76.452 1291 241 42 1128 2397 626990279 626989031 3.700000e-180 641.0
6 TraesCS7B01G077900 chr4A 82.033 551 90 9 1177 1723 625736675 625736130 1.110000e-125 460.0
7 TraesCS7B01G077900 chr4A 82.109 531 80 14 1035 1559 625756825 625756304 1.450000e-119 440.0
8 TraesCS7B01G077900 chr4A 83.586 396 56 8 3161 3554 625761319 625760931 3.230000e-96 363.0
9 TraesCS7B01G077900 chr4A 83.947 380 32 6 3821 4200 625758821 625758471 1.960000e-88 337.0
10 TraesCS7B01G077900 chr4A 89.516 248 22 1 3508 3751 625760917 625760670 1.190000e-80 311.0
11 TraesCS7B01G077900 chr4A 76.296 405 74 18 1909 2300 626992730 626992335 3.470000e-46 196.0
12 TraesCS7B01G077900 chr4A 76.684 386 69 9 1899 2279 626982375 626982006 1.250000e-45 195.0
13 TraesCS7B01G077900 chr4A 73.559 503 100 28 1942 2421 627290004 627289512 1.260000e-35 161.0
14 TraesCS7B01G077900 chr4A 72.909 550 114 29 1899 2421 627301395 627300854 1.640000e-34 158.0
15 TraesCS7B01G077900 chr4A 78.924 223 37 9 2008 2223 627140050 627139831 4.580000e-30 143.0
16 TraesCS7B01G077900 chr4A 78.475 223 38 9 2008 2223 627056949 627056730 2.130000e-28 137.0
17 TraesCS7B01G077900 chr4A 78.475 223 38 9 2008 2223 627260252 627260033 2.130000e-28 137.0
18 TraesCS7B01G077900 chr1D 97.052 848 25 0 1 848 481810892 481810045 0.000000e+00 1428.0
19 TraesCS7B01G077900 chr1D 97.048 847 25 0 1 847 492535863 492535017 0.000000e+00 1426.0
20 TraesCS7B01G077900 chr1D 96.042 859 24 6 1 850 481809051 481808194 0.000000e+00 1389.0
21 TraesCS7B01G077900 chr7D 96.323 843 29 2 1 843 192056187 192055347 0.000000e+00 1384.0
22 TraesCS7B01G077900 chr7D 92.408 843 55 8 1 839 92766244 92767081 0.000000e+00 1194.0
23 TraesCS7B01G077900 chr7D 91.176 850 67 7 1 845 454551583 454550737 0.000000e+00 1147.0
24 TraesCS7B01G077900 chr7D 95.349 86 4 0 845 930 202024691 202024776 2.130000e-28 137.0
25 TraesCS7B01G077900 chr3D 91.911 853 64 5 1 848 588400468 588399616 0.000000e+00 1188.0
26 TraesCS7B01G077900 chr5D 92.171 843 57 9 4 842 449628375 449627538 0.000000e+00 1182.0
27 TraesCS7B01G077900 chr5D 82.305 616 88 14 1078 1690 543440787 543441384 8.420000e-142 514.0
28 TraesCS7B01G077900 chr5D 79.712 695 113 22 1088 1774 542385236 542385910 1.110000e-130 477.0
29 TraesCS7B01G077900 chr5D 78.176 614 120 12 1154 1763 542396549 542397152 3.210000e-101 379.0
30 TraesCS7B01G077900 chr5D 78.283 396 74 9 1899 2283 542309391 542309785 1.220000e-60 244.0
31 TraesCS7B01G077900 chr5D 77.926 376 65 11 1899 2261 542397249 542397619 7.400000e-53 219.0
32 TraesCS7B01G077900 chr5D 94.186 86 5 0 845 930 441113784 441113869 9.910000e-27 132.0
33 TraesCS7B01G077900 chr3B 90.695 849 70 8 1 844 19403421 19404265 0.000000e+00 1122.0
34 TraesCS7B01G077900 chr3B 95.506 89 4 0 842 930 671863097 671863185 4.580000e-30 143.0
35 TraesCS7B01G077900 chr3B 89.855 69 7 0 853 921 794373713 794373781 6.050000e-14 89.8
36 TraesCS7B01G077900 chr5B 88.824 850 71 15 2920 3756 685041204 685042042 0.000000e+00 1022.0
37 TraesCS7B01G077900 chr5B 82.927 984 145 18 1909 2884 685040233 685041201 0.000000e+00 865.0
38 TraesCS7B01G077900 chr5B 87.015 670 79 5 1025 1693 685047853 685048515 0.000000e+00 749.0
39 TraesCS7B01G077900 chr5B 82.797 715 106 13 1058 1769 685039438 685040138 1.340000e-174 623.0
40 TraesCS7B01G077900 chr5B 80.611 655 107 16 1128 1775 684049685 684050326 5.110000e-134 488.0
41 TraesCS7B01G077900 chr5B 80.929 603 95 16 1075 1672 685237347 685237934 4.000000e-125 459.0
42 TraesCS7B01G077900 chr5B 80.880 523 73 12 1805 2303 685093155 685093674 1.920000e-103 387.0
43 TraesCS7B01G077900 chr5B 75.595 840 159 22 1907 2715 685070144 685070968 1.490000e-99 374.0
44 TraesCS7B01G077900 chr5B 75.681 514 105 18 1899 2397 684061794 684062302 5.680000e-59 239.0
45 TraesCS7B01G077900 chr5B 73.874 666 107 35 2907 3570 685049145 685049745 2.070000e-48 204.0
46 TraesCS7B01G077900 chr5B 92.135 89 7 0 842 930 688791961 688792049 4.610000e-25 126.0
47 TraesCS7B01G077900 chr3A 89.412 85 9 0 846 930 15424001 15423917 1.670000e-19 108.0
48 TraesCS7B01G077900 chr6B 82.857 70 9 2 852 918 658909599 658909530 4.740000e-05 60.2
49 TraesCS7B01G077900 chr1A 82.192 73 10 3 846 916 569381418 569381347 4.740000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G077900 chr7B 87193033 87197424 4391 True 8111.000000 8111 100.000000 1 4392 1 chr7B.!!$R1 4391
1 TraesCS7B01G077900 chr7B 87208839 87209550 711 True 262.050000 451 83.412500 2923 3678 2 chr7B.!!$R2 755
2 TraesCS7B01G077900 chr4A 625756304 625763524 7220 True 910.800000 3103 86.313200 968 4200 5 chr4A.!!$R8 3232
3 TraesCS7B01G077900 chr4A 625736130 625736675 545 True 460.000000 460 82.033000 1177 1723 1 chr4A.!!$R1 546
4 TraesCS7B01G077900 chr4A 626989031 626992730 3699 True 418.500000 641 76.374000 1128 2397 2 chr4A.!!$R9 1269
5 TraesCS7B01G077900 chr1D 492535017 492535863 846 True 1426.000000 1426 97.048000 1 847 1 chr1D.!!$R1 846
6 TraesCS7B01G077900 chr1D 481808194 481810892 2698 True 1408.500000 1428 96.547000 1 850 2 chr1D.!!$R2 849
7 TraesCS7B01G077900 chr7D 192055347 192056187 840 True 1384.000000 1384 96.323000 1 843 1 chr7D.!!$R1 842
8 TraesCS7B01G077900 chr7D 92766244 92767081 837 False 1194.000000 1194 92.408000 1 839 1 chr7D.!!$F1 838
9 TraesCS7B01G077900 chr7D 454550737 454551583 846 True 1147.000000 1147 91.176000 1 845 1 chr7D.!!$R2 844
10 TraesCS7B01G077900 chr3D 588399616 588400468 852 True 1188.000000 1188 91.911000 1 848 1 chr3D.!!$R1 847
11 TraesCS7B01G077900 chr5D 449627538 449628375 837 True 1182.000000 1182 92.171000 4 842 1 chr5D.!!$R1 838
12 TraesCS7B01G077900 chr5D 543440787 543441384 597 False 514.000000 514 82.305000 1078 1690 1 chr5D.!!$F4 612
13 TraesCS7B01G077900 chr5D 542385236 542385910 674 False 477.000000 477 79.712000 1088 1774 1 chr5D.!!$F3 686
14 TraesCS7B01G077900 chr5D 542396549 542397619 1070 False 299.000000 379 78.051000 1154 2261 2 chr5D.!!$F5 1107
15 TraesCS7B01G077900 chr3B 19403421 19404265 844 False 1122.000000 1122 90.695000 1 844 1 chr3B.!!$F1 843
16 TraesCS7B01G077900 chr5B 685039438 685042042 2604 False 836.666667 1022 84.849333 1058 3756 3 chr5B.!!$F7 2698
17 TraesCS7B01G077900 chr5B 684049685 684050326 641 False 488.000000 488 80.611000 1128 1775 1 chr5B.!!$F1 647
18 TraesCS7B01G077900 chr5B 685047853 685049745 1892 False 476.500000 749 80.444500 1025 3570 2 chr5B.!!$F8 2545
19 TraesCS7B01G077900 chr5B 685237347 685237934 587 False 459.000000 459 80.929000 1075 1672 1 chr5B.!!$F5 597
20 TraesCS7B01G077900 chr5B 685093155 685093674 519 False 387.000000 387 80.880000 1805 2303 1 chr5B.!!$F4 498
21 TraesCS7B01G077900 chr5B 685070144 685070968 824 False 374.000000 374 75.595000 1907 2715 1 chr5B.!!$F3 808
22 TraesCS7B01G077900 chr5B 684061794 684062302 508 False 239.000000 239 75.681000 1899 2397 1 chr5B.!!$F2 498

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
518 522 0.249120 CCGTCTGTGCAGAACCCATA 59.751 55.0 3.19 0.0 39.48 2.74 F
920 926 0.323451 AGAACAAAATCCGGGGGAGC 60.323 55.0 0.00 0.0 34.05 4.70 F
921 927 0.323451 GAACAAAATCCGGGGGAGCT 60.323 55.0 0.00 0.0 34.05 4.09 F
923 929 0.323451 ACAAAATCCGGGGGAGCTTC 60.323 55.0 0.00 0.0 34.05 3.86 F
2669 4531 0.098728 GCACGGGGATCACAATTTCG 59.901 55.0 0.00 0.0 0.00 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1578 3004 0.249699 ACAAATGACAGTCGCCGTGA 60.250 50.000 0.0 0.0 0.00 4.35 R
2645 4507 0.249120 TTGTGATCCCCGTGCTACAG 59.751 55.000 0.0 0.0 0.00 2.74 R
2669 4531 1.967319 ATGGCACGGGATAACATCAC 58.033 50.000 0.0 0.0 0.00 3.06 R
2889 4770 3.207265 TGCACTGACTAAAGAAAGGCA 57.793 42.857 0.0 0.0 32.19 4.75 R
4088 7983 0.034198 CGGTCATGTGTGGTGGTACA 59.966 55.000 0.0 0.0 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
223 225 3.243334 GCACCTGAGACCCGTATTACTAC 60.243 52.174 0.00 0.00 0.00 2.73
434 437 2.335369 GACGACGACAGCACTGGT 59.665 61.111 0.00 0.00 34.19 4.00
518 522 0.249120 CCGTCTGTGCAGAACCCATA 59.751 55.000 3.19 0.00 39.48 2.74
550 554 1.211969 CTGTTCGTCCACGGTCGAT 59.788 57.895 6.26 0.00 40.29 3.59
592 597 2.050691 CGAAAACCGAACTTGGCAATG 58.949 47.619 0.00 0.00 41.76 2.82
643 648 3.430098 GCAATTATTCAATCGGTTGGGCA 60.430 43.478 8.88 0.00 35.99 5.36
663 668 2.895372 GCCTGGCCCGTGTATTCG 60.895 66.667 7.66 0.00 0.00 3.34
767 773 7.176690 CCGGTATTCCAGATGGCTTATTAAAAT 59.823 37.037 0.00 0.00 34.44 1.82
870 876 9.505995 AAATATTACCGCTTTATTTAAACCACG 57.494 29.630 0.00 0.00 0.00 4.94
871 877 6.740411 ATTACCGCTTTATTTAAACCACGA 57.260 33.333 0.00 0.00 0.00 4.35
872 878 6.551385 TTACCGCTTTATTTAAACCACGAA 57.449 33.333 0.00 0.00 0.00 3.85
873 879 5.038247 ACCGCTTTATTTAAACCACGAAG 57.962 39.130 0.00 0.00 0.00 3.79
877 883 6.129300 CCGCTTTATTTAAACCACGAAGTTTG 60.129 38.462 14.82 0.00 41.61 2.93
878 884 6.129300 CGCTTTATTTAAACCACGAAGTTTGG 60.129 38.462 14.82 3.03 41.61 3.28
879 885 6.919115 GCTTTATTTAAACCACGAAGTTTGGA 59.081 34.615 14.82 6.35 41.61 3.53
880 886 7.435784 GCTTTATTTAAACCACGAAGTTTGGAA 59.564 33.333 14.82 10.78 41.61 3.53
882 888 8.804688 TTATTTAAACCACGAAGTTTGGAATG 57.195 30.769 14.82 0.00 41.61 2.67
883 889 5.838531 TTAAACCACGAAGTTTGGAATGT 57.161 34.783 14.82 0.00 41.61 2.71
885 891 2.925724 ACCACGAAGTTTGGAATGTCA 58.074 42.857 0.43 0.00 41.61 3.58
886 892 3.486383 ACCACGAAGTTTGGAATGTCAT 58.514 40.909 0.43 0.00 41.61 3.06
887 893 3.502211 ACCACGAAGTTTGGAATGTCATC 59.498 43.478 0.43 0.00 41.61 2.92
888 894 3.119849 CCACGAAGTTTGGAATGTCATCC 60.120 47.826 0.00 0.00 41.61 3.51
889 895 2.742053 ACGAAGTTTGGAATGTCATCCG 59.258 45.455 0.00 0.00 37.78 4.18
891 897 3.062639 CGAAGTTTGGAATGTCATCCGAG 59.937 47.826 0.00 0.00 42.76 4.63
892 898 3.981071 AGTTTGGAATGTCATCCGAGA 57.019 42.857 0.00 0.00 42.76 4.04
894 900 4.848357 AGTTTGGAATGTCATCCGAGATT 58.152 39.130 0.00 0.00 42.76 2.40
895 901 5.989477 AGTTTGGAATGTCATCCGAGATTA 58.011 37.500 0.00 0.00 42.76 1.75
896 902 5.817816 AGTTTGGAATGTCATCCGAGATTAC 59.182 40.000 0.00 0.00 42.76 1.89
897 903 5.351948 TTGGAATGTCATCCGAGATTACA 57.648 39.130 4.19 4.19 42.46 2.41
900 906 5.070313 TGGAATGTCATCCGAGATTACATCA 59.930 40.000 11.59 6.43 40.03 3.07
903 909 5.852282 TGTCATCCGAGATTACATCAAGA 57.148 39.130 0.00 0.00 0.00 3.02
904 910 6.220726 TGTCATCCGAGATTACATCAAGAA 57.779 37.500 0.00 0.00 0.00 2.52
905 911 6.042777 TGTCATCCGAGATTACATCAAGAAC 58.957 40.000 0.00 0.00 0.00 3.01
906 912 6.042777 GTCATCCGAGATTACATCAAGAACA 58.957 40.000 0.00 0.00 0.00 3.18
908 914 7.064609 GTCATCCGAGATTACATCAAGAACAAA 59.935 37.037 0.00 0.00 0.00 2.83
911 917 7.974675 TCCGAGATTACATCAAGAACAAAATC 58.025 34.615 0.00 0.00 0.00 2.17
912 918 7.065803 TCCGAGATTACATCAAGAACAAAATCC 59.934 37.037 0.00 0.00 0.00 3.01
913 919 6.901887 CGAGATTACATCAAGAACAAAATCCG 59.098 38.462 0.00 0.00 0.00 4.18
914 920 7.088589 AGATTACATCAAGAACAAAATCCGG 57.911 36.000 0.00 0.00 0.00 5.14
915 921 5.637006 TTACATCAAGAACAAAATCCGGG 57.363 39.130 0.00 0.00 0.00 5.73
916 922 2.825532 ACATCAAGAACAAAATCCGGGG 59.174 45.455 0.00 0.00 0.00 5.73
917 923 1.917872 TCAAGAACAAAATCCGGGGG 58.082 50.000 0.00 0.00 0.00 5.40
918 924 1.425831 TCAAGAACAAAATCCGGGGGA 59.574 47.619 0.00 0.00 35.55 4.81
919 925 1.818674 CAAGAACAAAATCCGGGGGAG 59.181 52.381 0.00 0.00 34.05 4.30
920 926 0.323451 AGAACAAAATCCGGGGGAGC 60.323 55.000 0.00 0.00 34.05 4.70
921 927 0.323451 GAACAAAATCCGGGGGAGCT 60.323 55.000 0.00 0.00 34.05 4.09
923 929 0.323451 ACAAAATCCGGGGGAGCTTC 60.323 55.000 0.00 0.00 34.05 3.86
925 931 1.211949 CAAAATCCGGGGGAGCTTCTA 59.788 52.381 0.00 0.00 34.05 2.10
926 932 1.591768 AAATCCGGGGGAGCTTCTAA 58.408 50.000 0.00 0.00 34.05 2.10
927 933 0.837940 AATCCGGGGGAGCTTCTAAC 59.162 55.000 0.00 0.00 34.05 2.34
929 935 1.993391 CCGGGGGAGCTTCTAACCA 60.993 63.158 0.00 0.00 0.00 3.67
930 936 1.522569 CGGGGGAGCTTCTAACCAG 59.477 63.158 0.00 0.00 0.00 4.00
931 937 1.265454 CGGGGGAGCTTCTAACCAGT 61.265 60.000 0.00 0.00 0.00 4.00
933 939 0.984995 GGGGAGCTTCTAACCAGTGT 59.015 55.000 0.00 0.00 0.00 3.55
934 940 1.339151 GGGGAGCTTCTAACCAGTGTG 60.339 57.143 0.00 0.00 0.00 3.82
935 941 1.339151 GGGAGCTTCTAACCAGTGTGG 60.339 57.143 0.00 0.00 45.02 4.17
944 950 3.524014 CCAGTGTGGTTTGCTGCA 58.476 55.556 0.00 0.00 31.35 4.41
945 951 2.043625 CCAGTGTGGTTTGCTGCAT 58.956 52.632 1.84 0.00 31.35 3.96
946 952 0.390124 CCAGTGTGGTTTGCTGCATT 59.610 50.000 1.84 0.00 31.35 3.56
947 953 1.202557 CCAGTGTGGTTTGCTGCATTT 60.203 47.619 1.84 0.00 31.35 2.32
948 954 2.553086 CAGTGTGGTTTGCTGCATTTT 58.447 42.857 1.84 0.00 0.00 1.82
949 955 2.937799 CAGTGTGGTTTGCTGCATTTTT 59.062 40.909 1.84 0.00 0.00 1.94
992 998 2.999507 AAACAAAGTCACGTGCAACA 57.000 40.000 11.67 0.00 35.74 3.33
1595 3024 1.359848 GATCACGGCGACTGTCATTT 58.640 50.000 16.62 0.00 0.00 2.32
1673 3139 0.461516 TGCGTCTACTCGTCCGAGAT 60.462 55.000 22.34 9.73 44.53 2.75
1792 3471 3.916544 CCTCTGGCGGCGCTATCA 61.917 66.667 32.30 19.93 0.00 2.15
1849 3610 7.039434 TGGATGCACACAATTTGGATTTAACTA 60.039 33.333 0.78 0.00 0.00 2.24
2039 3806 5.319453 TGATCTGGAGAATTTTCTTGCACT 58.681 37.500 0.00 0.00 37.73 4.40
2248 4078 6.650390 AGGTATTGCCATTGTTTTTGATGTTC 59.350 34.615 0.00 0.00 40.61 3.18
2323 4161 1.462283 CATGAGCCACTGTTCACTTCG 59.538 52.381 0.00 0.00 34.33 3.79
2436 4297 5.246981 TGGTTCTCATGTTCTCCTCATTT 57.753 39.130 0.00 0.00 0.00 2.32
2484 4346 8.417780 TCAATGTTGTTCCAATTTACAAACTG 57.582 30.769 0.00 0.00 36.15 3.16
2489 4351 8.253810 TGTTGTTCCAATTTACAAACTGATTGA 58.746 29.630 4.58 0.00 41.85 2.57
2542 4404 6.207221 TGTCTCACAACTCAAACAATGCATAT 59.793 34.615 0.00 0.00 0.00 1.78
2569 4431 6.911511 TGCATTTTTCATTTTTACTTGCAAGC 59.088 30.769 26.27 7.36 34.91 4.01
2598 4460 1.339610 TGTTTTTGCATCCGAACCCAG 59.660 47.619 0.00 0.00 0.00 4.45
2645 4507 8.651588 CATATTCGCTGGATGAACTAGTTTATC 58.348 37.037 24.98 24.98 35.57 1.75
2669 4531 0.098728 GCACGGGGATCACAATTTCG 59.901 55.000 0.00 0.00 0.00 3.46
2681 4545 5.811399 TCACAATTTCGTGATGTTATCCC 57.189 39.130 0.00 0.00 40.94 3.85
2699 4563 4.280436 TCCCGTGCCATACATATTTAGG 57.720 45.455 0.00 0.00 0.00 2.69
2730 4611 5.934043 CAGTCAGGAAGTGTGTCATCATTTA 59.066 40.000 0.00 0.00 0.00 1.40
2735 4616 5.183904 AGGAAGTGTGTCATCATTTAAAGGC 59.816 40.000 0.00 0.00 0.00 4.35
2755 4636 2.080693 CGCCTTTGCTTACCATACACA 58.919 47.619 0.00 0.00 34.43 3.72
2786 4667 2.174685 TATAGCTGCTTCCCACCAGA 57.825 50.000 7.79 0.00 0.00 3.86
2789 4670 0.185901 AGCTGCTTCCCACCAGAAAA 59.814 50.000 0.00 0.00 0.00 2.29
2886 4767 9.219603 TCAATTAAGGAAACAAGTGACTGATAG 57.780 33.333 0.00 0.00 0.00 2.08
2889 4770 6.426646 AAGGAAACAAGTGACTGATAGTCT 57.573 37.500 10.03 0.00 45.27 3.24
2949 4830 8.547967 TGTCAGTTTAAGCTAGTGGATTTTAG 57.452 34.615 0.00 0.00 0.00 1.85
2984 4865 6.144175 GTGCCTTGTTAACGTTAATTGCTTA 58.856 36.000 22.65 7.31 0.00 3.09
3030 4935 8.033038 GGATTTAGGGTGGTATTTTTGTTTCTC 58.967 37.037 0.00 0.00 0.00 2.87
3066 4971 4.757149 AGCATTCTTTGTTCAGGTGAGTAC 59.243 41.667 0.00 0.00 0.00 2.73
3075 4980 1.075050 TCAGGTGAGTACGAGAAGGGT 59.925 52.381 0.00 0.00 0.00 4.34
3173 5088 3.869246 ACTTATAACAACGAATGGGCTCG 59.131 43.478 0.00 0.00 44.50 5.03
3206 5127 8.336801 ACAGTTCTAAAAATGATTCCTGGTAC 57.663 34.615 0.00 0.00 34.62 3.34
3229 5150 7.878477 ACAAAGTAAATTGCTGAATGACATG 57.122 32.000 0.00 0.00 33.52 3.21
3255 5176 5.449999 CCTTTGTTTTGAGGTAGTTGGTGTC 60.450 44.000 0.00 0.00 0.00 3.67
3336 5258 1.265095 TCTTGCAGCAAAAGCTCTTCG 59.735 47.619 9.65 0.00 0.00 3.79
3365 5287 1.317613 TATTGCCCACGATTGCCATC 58.682 50.000 0.00 0.00 0.00 3.51
3394 5316 4.679373 TGGCTCATTCTTCTCATAGGAC 57.321 45.455 0.00 0.00 0.00 3.85
3396 5318 4.718774 TGGCTCATTCTTCTCATAGGACTT 59.281 41.667 0.00 0.00 0.00 3.01
3397 5319 5.055812 GGCTCATTCTTCTCATAGGACTTG 58.944 45.833 0.00 0.00 0.00 3.16
3423 5345 1.293924 GTGGTGGAGATGATCAAGCG 58.706 55.000 0.00 0.00 31.41 4.68
3427 5349 2.632377 GTGGAGATGATCAAGCGGAAA 58.368 47.619 0.00 0.00 0.00 3.13
3438 5360 3.601435 TCAAGCGGAAATATTGAACGGA 58.399 40.909 8.24 0.00 30.33 4.69
3573 5566 9.603921 AATTTTGTGGTTCAATGGATCAATATC 57.396 29.630 0.00 0.00 35.84 1.63
3672 5669 5.727434 ACAGATCATTTCATTTGCCCTTTC 58.273 37.500 0.00 0.00 0.00 2.62
3764 7197 7.775053 AGATGACTATTATCTCCCAGACTTC 57.225 40.000 0.00 0.00 29.05 3.01
3771 7204 0.335019 TCTCCCAGACTTCATCCGGA 59.665 55.000 6.61 6.61 0.00 5.14
3803 7236 1.153289 CCTGGATCTGGGCACTTCG 60.153 63.158 0.00 0.00 0.00 3.79
3806 7239 0.036388 TGGATCTGGGCACTTCGTTC 60.036 55.000 0.00 0.00 0.00 3.95
3821 7254 3.422417 TCGTTCTGCTGATGTACTAGC 57.578 47.619 9.45 9.45 40.29 3.42
3848 7281 4.329392 TGCAATTCATCATGTCAGTCAGT 58.671 39.130 0.00 0.00 0.00 3.41
3857 7290 8.893219 TCATCATGTCAGTCAGTTTTATATCC 57.107 34.615 0.00 0.00 0.00 2.59
3858 7291 8.708378 TCATCATGTCAGTCAGTTTTATATCCT 58.292 33.333 0.00 0.00 0.00 3.24
3861 7294 9.383519 TCATGTCAGTCAGTTTTATATCCTTTC 57.616 33.333 0.00 0.00 0.00 2.62
3863 7296 9.606631 ATGTCAGTCAGTTTTATATCCTTTCTC 57.393 33.333 0.00 0.00 0.00 2.87
3951 7846 1.066858 TCAGTCCTCCAAATGAGACGC 60.067 52.381 0.00 0.00 44.42 5.19
3959 7854 1.133025 CCAAATGAGACGCCATGGTTC 59.867 52.381 14.67 10.43 0.00 3.62
3982 7877 4.445718 CGATTAATCGCAACATGCTAGACT 59.554 41.667 23.67 0.00 43.84 3.24
3983 7878 5.611197 CGATTAATCGCAACATGCTAGACTG 60.611 44.000 23.67 0.00 43.84 3.51
3984 7879 1.293924 ATCGCAACATGCTAGACTGC 58.706 50.000 0.00 0.00 42.25 4.40
3985 7880 0.740868 TCGCAACATGCTAGACTGCC 60.741 55.000 0.00 0.00 42.25 4.85
3986 7881 1.020861 CGCAACATGCTAGACTGCCA 61.021 55.000 0.00 0.00 42.25 4.92
3987 7882 0.731417 GCAACATGCTAGACTGCCAG 59.269 55.000 0.00 0.00 40.96 4.85
3991 7886 4.194640 CAACATGCTAGACTGCCAGTAAT 58.805 43.478 0.00 0.00 0.00 1.89
4023 7918 8.789762 TGAAGCCCAAAAGTATAAAGTAGAAAC 58.210 33.333 0.00 0.00 0.00 2.78
4026 7921 7.726738 AGCCCAAAAGTATAAAGTAGAAACCAA 59.273 33.333 0.00 0.00 0.00 3.67
4076 7971 7.381789 TGGCATTTACATGGTATTACCTCTA 57.618 36.000 13.90 0.00 39.58 2.43
4079 7974 7.553044 GGCATTTACATGGTATTACCTCTATCC 59.447 40.741 13.90 1.23 39.58 2.59
4080 7975 7.553044 GCATTTACATGGTATTACCTCTATCCC 59.447 40.741 13.90 0.00 39.58 3.85
4082 7977 4.748701 ACATGGTATTACCTCTATCCCGT 58.251 43.478 13.90 0.00 39.58 5.28
4083 7978 5.895807 ACATGGTATTACCTCTATCCCGTA 58.104 41.667 13.90 0.00 39.58 4.02
4084 7979 5.713861 ACATGGTATTACCTCTATCCCGTAC 59.286 44.000 13.90 0.00 39.58 3.67
4085 7980 5.323382 TGGTATTACCTCTATCCCGTACA 57.677 43.478 13.90 0.00 39.58 2.90
4086 7981 5.704354 TGGTATTACCTCTATCCCGTACAA 58.296 41.667 13.90 0.00 39.58 2.41
4087 7982 6.135454 TGGTATTACCTCTATCCCGTACAAA 58.865 40.000 13.90 0.00 39.58 2.83
4088 7983 6.783977 TGGTATTACCTCTATCCCGTACAAAT 59.216 38.462 13.90 0.00 39.58 2.32
4089 7984 7.095270 GGTATTACCTCTATCCCGTACAAATG 58.905 42.308 5.56 0.00 34.73 2.32
4090 7985 6.742559 ATTACCTCTATCCCGTACAAATGT 57.257 37.500 0.00 0.00 0.00 2.71
4091 7986 7.844493 ATTACCTCTATCCCGTACAAATGTA 57.156 36.000 0.00 0.00 0.00 2.29
4092 7987 5.526506 ACCTCTATCCCGTACAAATGTAC 57.473 43.478 12.61 12.61 45.47 2.90
4093 7988 4.343239 ACCTCTATCCCGTACAAATGTACC 59.657 45.833 15.95 1.84 46.01 3.34
4094 7989 4.342951 CCTCTATCCCGTACAAATGTACCA 59.657 45.833 15.95 3.40 46.01 3.25
4095 7990 5.266733 TCTATCCCGTACAAATGTACCAC 57.733 43.478 15.95 0.00 46.01 4.16
4096 7991 2.766345 TCCCGTACAAATGTACCACC 57.234 50.000 15.95 0.00 46.01 4.61
4097 7992 1.976404 TCCCGTACAAATGTACCACCA 59.024 47.619 15.95 0.00 46.01 4.17
4098 7993 2.078392 CCCGTACAAATGTACCACCAC 58.922 52.381 15.95 0.00 46.01 4.16
4106 8001 2.489938 ATGTACCACCACACATGACC 57.510 50.000 0.00 0.00 34.15 4.02
4131 8026 3.808728 ACGCCTTGCAGTATATGTTCAT 58.191 40.909 0.00 0.00 0.00 2.57
4148 8043 2.481441 TCATCTCTGGTGGCCTATTGT 58.519 47.619 3.32 0.00 0.00 2.71
4154 8049 3.153919 TCTGGTGGCCTATTGTTTGTTC 58.846 45.455 3.32 0.00 0.00 3.18
4168 8063 2.483583 TTGTTCGGTTGTTGCATGTC 57.516 45.000 0.00 0.00 0.00 3.06
4188 8083 8.225107 GCATGTCAACTCGTATAAACTGTTTTA 58.775 33.333 11.48 1.69 0.00 1.52
4206 8101 9.377312 ACTGTTTTAATTTGCATGTTAACTTGT 57.623 25.926 19.31 5.40 0.00 3.16
4209 8104 9.980780 GTTTTAATTTGCATGTTAACTTGTGTT 57.019 25.926 19.31 12.53 39.98 3.32
4210 8105 9.979270 TTTTAATTTGCATGTTAACTTGTGTTG 57.021 25.926 19.31 4.73 37.59 3.33
4213 8108 4.972514 TGCATGTTAACTTGTGTTGTGA 57.027 36.364 19.31 0.00 37.59 3.58
4215 8110 5.518812 TGCATGTTAACTTGTGTTGTGATC 58.481 37.500 19.31 4.01 37.59 2.92
4220 8115 6.914259 TGTTAACTTGTGTTGTGATCAAACA 58.086 32.000 15.17 15.17 37.59 2.83
4223 8118 4.935702 ACTTGTGTTGTGATCAAACATGG 58.064 39.130 19.43 15.59 35.20 3.66
4224 8119 4.202141 ACTTGTGTTGTGATCAAACATGGG 60.202 41.667 19.43 15.37 35.20 4.00
4225 8120 3.560105 TGTGTTGTGATCAAACATGGGA 58.440 40.909 19.43 0.00 35.20 4.37
4227 8122 4.403752 TGTGTTGTGATCAAACATGGGAAA 59.596 37.500 19.43 6.21 35.20 3.13
4230 8125 7.151308 GTGTTGTGATCAAACATGGGAAAATA 58.849 34.615 19.43 0.00 35.20 1.40
4232 8127 8.034215 TGTTGTGATCAAACATGGGAAAATATC 58.966 33.333 15.17 0.00 35.20 1.63
4233 8128 7.715266 TGTGATCAAACATGGGAAAATATCA 57.285 32.000 0.00 0.00 0.00 2.15
4234 8129 7.546358 TGTGATCAAACATGGGAAAATATCAC 58.454 34.615 0.00 7.56 40.52 3.06
4235 8130 6.980397 GTGATCAAACATGGGAAAATATCACC 59.020 38.462 0.00 0.00 36.37 4.02
4236 8131 5.574891 TCAAACATGGGAAAATATCACCG 57.425 39.130 0.00 0.00 0.00 4.94
4237 8132 5.013547 TCAAACATGGGAAAATATCACCGT 58.986 37.500 0.00 0.00 0.00 4.83
4238 8133 5.478679 TCAAACATGGGAAAATATCACCGTT 59.521 36.000 0.00 0.00 29.82 4.44
4239 8134 4.981806 ACATGGGAAAATATCACCGTTG 57.018 40.909 0.00 0.00 0.00 4.10
4241 8136 3.722908 TGGGAAAATATCACCGTTGGA 57.277 42.857 0.00 0.00 0.00 3.53
4242 8137 4.035612 TGGGAAAATATCACCGTTGGAA 57.964 40.909 0.00 0.00 0.00 3.53
4243 8138 4.013728 TGGGAAAATATCACCGTTGGAAG 58.986 43.478 0.00 0.00 0.00 3.46
4244 8139 3.380320 GGGAAAATATCACCGTTGGAAGG 59.620 47.826 0.00 0.00 0.00 3.46
4245 8140 3.380320 GGAAAATATCACCGTTGGAAGGG 59.620 47.826 0.00 0.00 39.76 3.95
4246 8141 4.266714 GAAAATATCACCGTTGGAAGGGA 58.733 43.478 5.14 0.00 37.39 4.20
4247 8142 3.560636 AATATCACCGTTGGAAGGGAG 57.439 47.619 5.14 0.00 37.39 4.30
4248 8143 0.539986 TATCACCGTTGGAAGGGAGC 59.460 55.000 5.14 0.00 37.39 4.70
4251 9793 1.536662 ACCGTTGGAAGGGAGCTCT 60.537 57.895 14.64 0.00 37.39 4.09
4259 9801 2.860972 GAAGGGAGCTCTTGGGCGAC 62.861 65.000 14.64 0.00 37.29 5.19
4260 9802 3.706373 GGGAGCTCTTGGGCGACA 61.706 66.667 14.64 0.00 37.29 4.35
4261 9803 2.435059 GGAGCTCTTGGGCGACAC 60.435 66.667 14.64 0.00 37.29 3.67
4262 9804 2.811317 GAGCTCTTGGGCGACACG 60.811 66.667 6.43 0.00 37.29 4.49
4279 9821 3.599704 GGCCGGCGACCGTACTAT 61.600 66.667 22.54 0.00 46.80 2.12
4280 9822 2.354305 GCCGGCGACCGTACTATG 60.354 66.667 12.58 2.56 46.80 2.23
4281 9823 2.333938 CCGGCGACCGTACTATGG 59.666 66.667 9.30 0.00 46.80 2.74
4282 9824 2.188829 CCGGCGACCGTACTATGGA 61.189 63.158 9.30 0.00 46.80 3.41
4284 9826 0.313043 CGGCGACCGTACTATGGATT 59.687 55.000 0.00 0.00 42.73 3.01
4285 9827 1.269413 CGGCGACCGTACTATGGATTT 60.269 52.381 0.00 0.00 42.73 2.17
4286 9828 2.030893 CGGCGACCGTACTATGGATTTA 60.031 50.000 0.00 0.00 42.73 1.40
4287 9829 3.572584 GGCGACCGTACTATGGATTTAG 58.427 50.000 0.92 0.00 0.00 1.85
4289 9831 3.551454 GCGACCGTACTATGGATTTAGCA 60.551 47.826 0.92 0.00 0.00 3.49
4294 9836 5.363005 ACCGTACTATGGATTTAGCACTTCT 59.637 40.000 0.92 0.00 0.00 2.85
4296 9838 5.175856 CGTACTATGGATTTAGCACTTCTGC 59.824 44.000 0.00 0.00 44.63 4.26
4304 9846 3.887783 GCACTTCTGCTCTCTGGC 58.112 61.111 0.00 0.00 40.63 4.85
4305 9847 2.099431 GCACTTCTGCTCTCTGGCG 61.099 63.158 0.00 0.00 40.63 5.69
4306 9848 1.447489 CACTTCTGCTCTCTGGCGG 60.447 63.158 0.00 0.00 39.72 6.13
4307 9849 2.186384 CTTCTGCTCTCTGGCGGG 59.814 66.667 0.00 0.00 38.94 6.13
4308 9850 2.283894 TTCTGCTCTCTGGCGGGA 60.284 61.111 0.00 0.00 38.94 5.14
4309 9851 1.892819 CTTCTGCTCTCTGGCGGGAA 61.893 60.000 0.00 0.00 38.94 3.97
4310 9852 1.892819 TTCTGCTCTCTGGCGGGAAG 61.893 60.000 0.00 0.00 38.94 3.46
4311 9853 3.382803 CTGCTCTCTGGCGGGAAGG 62.383 68.421 0.00 0.00 35.17 3.46
4312 9854 3.077556 GCTCTCTGGCGGGAAGGA 61.078 66.667 0.00 0.00 0.00 3.36
4315 9857 2.685380 CTCTGGCGGGAAGGAGGT 60.685 66.667 0.00 0.00 0.00 3.85
4316 9858 3.003173 TCTGGCGGGAAGGAGGTG 61.003 66.667 0.00 0.00 0.00 4.00
4317 9859 3.322466 CTGGCGGGAAGGAGGTGT 61.322 66.667 0.00 0.00 0.00 4.16
4318 9860 3.316573 CTGGCGGGAAGGAGGTGTC 62.317 68.421 0.00 0.00 0.00 3.67
4319 9861 3.003763 GGCGGGAAGGAGGTGTCT 61.004 66.667 0.00 0.00 0.00 3.41
4329 9871 2.527624 AGGTGTCTCCTGCTGGCA 60.528 61.111 4.42 0.00 46.19 4.92
4330 9872 2.359230 GGTGTCTCCTGCTGGCAC 60.359 66.667 4.42 7.47 0.00 5.01
4332 9874 3.233980 TGTCTCCTGCTGGCACGT 61.234 61.111 4.42 0.00 0.00 4.49
4333 9875 1.906333 TGTCTCCTGCTGGCACGTA 60.906 57.895 4.42 0.00 0.00 3.57
4334 9876 1.257750 TGTCTCCTGCTGGCACGTAT 61.258 55.000 4.42 0.00 0.00 3.06
4335 9877 0.807667 GTCTCCTGCTGGCACGTATG 60.808 60.000 4.42 0.00 0.00 2.39
4336 9878 1.522355 CTCCTGCTGGCACGTATGG 60.522 63.158 4.42 0.00 0.00 2.74
4346 9888 3.572539 ACGTATGGCGCCGCATTG 61.573 61.111 23.90 12.91 46.11 2.82
4348 9890 3.585990 GTATGGCGCCGCATTGCT 61.586 61.111 23.90 2.40 0.00 3.91
4354 9896 4.183686 CGCCGCATTGCTGAAGGG 62.184 66.667 7.12 1.06 0.00 3.95
4356 9898 3.142838 CCGCATTGCTGAAGGGGG 61.143 66.667 7.12 0.00 39.29 5.40
4359 9901 3.830192 CATTGCTGAAGGGGGCGC 61.830 66.667 0.00 0.00 0.00 6.53
4360 9902 4.365111 ATTGCTGAAGGGGGCGCA 62.365 61.111 10.83 0.00 0.00 6.09
4361 9903 3.884704 ATTGCTGAAGGGGGCGCAA 62.885 57.895 10.83 0.00 45.16 4.85
4362 9904 4.594854 TGCTGAAGGGGGCGCAAA 62.595 61.111 10.83 0.00 0.00 3.68
4363 9905 3.070576 GCTGAAGGGGGCGCAAAT 61.071 61.111 10.83 0.00 0.00 2.32
4365 9907 1.379044 CTGAAGGGGGCGCAAATCT 60.379 57.895 10.83 0.00 0.00 2.40
4366 9908 1.378514 TGAAGGGGGCGCAAATCTC 60.379 57.895 10.83 0.00 0.00 2.75
4369 9911 2.517166 GGGGGCGCAAATCTCCTC 60.517 66.667 10.83 0.00 0.00 3.71
4370 9912 2.897350 GGGGCGCAAATCTCCTCG 60.897 66.667 10.83 0.00 0.00 4.63
4371 9913 2.897350 GGGCGCAAATCTCCTCGG 60.897 66.667 10.83 0.00 0.00 4.63
4372 9914 3.577313 GGCGCAAATCTCCTCGGC 61.577 66.667 10.83 0.00 40.08 5.54
4373 9915 2.512515 GCGCAAATCTCCTCGGCT 60.513 61.111 0.30 0.00 0.00 5.52
4374 9916 2.529619 GCGCAAATCTCCTCGGCTC 61.530 63.158 0.30 0.00 0.00 4.70
4381 9923 0.110486 ATCTCCTCGGCTCTCTCCTC 59.890 60.000 0.00 0.00 0.00 3.71
4382 9924 1.891919 CTCCTCGGCTCTCTCCTCG 60.892 68.421 0.00 0.00 0.00 4.63
4383 9925 2.190843 CCTCGGCTCTCTCCTCGA 59.809 66.667 0.00 0.00 0.00 4.04
4384 9926 1.891919 CCTCGGCTCTCTCCTCGAG 60.892 68.421 5.13 5.13 45.81 4.04
4385 9927 1.891919 CTCGGCTCTCTCCTCGAGG 60.892 68.421 26.32 26.32 43.49 4.63
4386 9928 2.190843 CGGCTCTCTCCTCGAGGA 59.809 66.667 31.67 31.67 43.08 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
223 225 1.879372 CGCATGTGGGGAGGACATATG 60.879 57.143 0.00 0.00 39.52 1.78
518 522 1.609061 CGAACAGAGCAAGGTGTGGAT 60.609 52.381 1.53 0.00 0.00 3.41
550 554 0.874390 GTGCGCATCTTGTCTTTCCA 59.126 50.000 15.91 0.00 0.00 3.53
575 579 0.033366 GCCATTGCCAAGTTCGGTTT 59.967 50.000 0.00 0.00 0.00 3.27
643 648 2.660258 GAATACACGGGCCAGGCGAT 62.660 60.000 8.08 0.00 0.00 4.58
663 668 2.943033 AGGGCTGCATTTAATGTCGTAC 59.057 45.455 6.81 0.00 0.00 3.67
767 773 1.402325 CCTGTGCGTCGTGATGACTAA 60.402 52.381 3.03 0.00 45.87 2.24
848 854 6.740411 TCGTGGTTTAAATAAAGCGGTAAT 57.260 33.333 9.71 0.00 44.24 1.89
849 855 6.204495 ACTTCGTGGTTTAAATAAAGCGGTAA 59.796 34.615 9.71 4.20 44.24 2.85
850 856 5.700373 ACTTCGTGGTTTAAATAAAGCGGTA 59.300 36.000 9.71 0.33 44.24 4.02
851 857 4.516321 ACTTCGTGGTTTAAATAAAGCGGT 59.484 37.500 9.71 0.00 44.24 5.68
852 858 5.038247 ACTTCGTGGTTTAAATAAAGCGG 57.962 39.130 9.71 5.53 44.24 5.52
853 859 6.129300 CCAAACTTCGTGGTTTAAATAAAGCG 60.129 38.462 9.71 4.99 44.24 4.68
854 860 6.919115 TCCAAACTTCGTGGTTTAAATAAAGC 59.081 34.615 7.89 7.89 42.32 3.51
855 861 8.859517 TTCCAAACTTCGTGGTTTAAATAAAG 57.140 30.769 7.81 0.00 37.32 1.85
857 863 8.414778 ACATTCCAAACTTCGTGGTTTAAATAA 58.585 29.630 7.81 3.01 37.32 1.40
860 866 6.127703 TGACATTCCAAACTTCGTGGTTTAAA 60.128 34.615 7.81 6.75 37.32 1.52
862 868 4.882427 TGACATTCCAAACTTCGTGGTTTA 59.118 37.500 7.81 0.00 37.32 2.01
863 869 3.697045 TGACATTCCAAACTTCGTGGTTT 59.303 39.130 3.50 3.50 39.62 3.27
864 870 3.283751 TGACATTCCAAACTTCGTGGTT 58.716 40.909 0.00 0.00 37.43 3.67
866 872 3.119849 GGATGACATTCCAAACTTCGTGG 60.120 47.826 0.00 0.00 35.72 4.94
867 873 3.424829 CGGATGACATTCCAAACTTCGTG 60.425 47.826 0.00 0.00 35.34 4.35
868 874 2.742053 CGGATGACATTCCAAACTTCGT 59.258 45.455 0.00 0.00 35.34 3.85
869 875 3.000041 TCGGATGACATTCCAAACTTCG 59.000 45.455 0.00 0.00 35.34 3.79
870 876 4.253685 TCTCGGATGACATTCCAAACTTC 58.746 43.478 0.00 0.00 35.34 3.01
871 877 4.286297 TCTCGGATGACATTCCAAACTT 57.714 40.909 0.00 0.00 35.34 2.66
872 878 3.981071 TCTCGGATGACATTCCAAACT 57.019 42.857 0.00 0.00 35.34 2.66
873 879 5.584649 TGTAATCTCGGATGACATTCCAAAC 59.415 40.000 1.19 0.00 35.34 2.93
874 880 5.739959 TGTAATCTCGGATGACATTCCAAA 58.260 37.500 1.19 0.00 35.34 3.28
877 883 5.541845 TGATGTAATCTCGGATGACATTCC 58.458 41.667 14.50 7.00 45.81 3.01
878 884 6.925718 TCTTGATGTAATCTCGGATGACATTC 59.074 38.462 14.50 10.17 45.81 2.67
879 885 6.820335 TCTTGATGTAATCTCGGATGACATT 58.180 36.000 14.50 3.66 45.81 2.71
880 886 6.410942 TCTTGATGTAATCTCGGATGACAT 57.589 37.500 13.65 13.65 45.81 3.06
882 888 6.042777 TGTTCTTGATGTAATCTCGGATGAC 58.957 40.000 0.00 0.00 45.81 3.06
883 889 6.220726 TGTTCTTGATGTAATCTCGGATGA 57.779 37.500 0.00 0.00 45.81 2.92
885 891 7.921786 TTTTGTTCTTGATGTAATCTCGGAT 57.078 32.000 0.00 0.00 45.81 4.18
886 892 7.065803 GGATTTTGTTCTTGATGTAATCTCGGA 59.934 37.037 0.00 0.00 45.81 4.55
887 893 7.189512 GGATTTTGTTCTTGATGTAATCTCGG 58.810 38.462 0.00 0.00 45.81 4.63
888 894 6.901887 CGGATTTTGTTCTTGATGTAATCTCG 59.098 38.462 0.00 0.00 45.81 4.04
889 895 7.189512 CCGGATTTTGTTCTTGATGTAATCTC 58.810 38.462 0.00 0.00 45.81 2.75
891 897 6.265577 CCCGGATTTTGTTCTTGATGTAATC 58.734 40.000 0.73 0.00 45.83 1.75
892 898 5.127031 CCCCGGATTTTGTTCTTGATGTAAT 59.873 40.000 0.73 0.00 0.00 1.89
894 900 4.013728 CCCCGGATTTTGTTCTTGATGTA 58.986 43.478 0.73 0.00 0.00 2.29
895 901 2.825532 CCCCGGATTTTGTTCTTGATGT 59.174 45.455 0.73 0.00 0.00 3.06
896 902 2.166254 CCCCCGGATTTTGTTCTTGATG 59.834 50.000 0.73 0.00 0.00 3.07
897 903 2.042433 TCCCCCGGATTTTGTTCTTGAT 59.958 45.455 0.73 0.00 0.00 2.57
900 906 1.891011 GCTCCCCCGGATTTTGTTCTT 60.891 52.381 0.73 0.00 0.00 2.52
903 909 0.114364 AAGCTCCCCCGGATTTTGTT 59.886 50.000 0.73 0.00 0.00 2.83
904 910 0.323451 GAAGCTCCCCCGGATTTTGT 60.323 55.000 0.73 0.00 0.00 2.83
905 911 0.034089 AGAAGCTCCCCCGGATTTTG 60.034 55.000 0.73 0.00 0.00 2.44
906 912 1.591768 TAGAAGCTCCCCCGGATTTT 58.408 50.000 0.73 0.00 0.00 1.82
908 914 0.837940 GTTAGAAGCTCCCCCGGATT 59.162 55.000 0.73 0.00 0.00 3.01
911 917 1.972660 CTGGTTAGAAGCTCCCCCGG 61.973 65.000 0.00 0.00 0.00 5.73
912 918 1.265454 ACTGGTTAGAAGCTCCCCCG 61.265 60.000 0.00 0.00 0.00 5.73
913 919 0.253327 CACTGGTTAGAAGCTCCCCC 59.747 60.000 0.00 0.00 0.00 5.40
914 920 0.984995 ACACTGGTTAGAAGCTCCCC 59.015 55.000 0.00 0.00 0.00 4.81
915 921 1.339151 CCACACTGGTTAGAAGCTCCC 60.339 57.143 0.00 0.00 31.35 4.30
916 922 2.100605 CCACACTGGTTAGAAGCTCC 57.899 55.000 0.00 0.00 31.35 4.70
927 933 0.390124 AATGCAGCAAACCACACTGG 59.610 50.000 0.00 0.00 45.02 4.00
929 935 2.985957 AAAATGCAGCAAACCACACT 57.014 40.000 0.00 0.00 0.00 3.55
992 998 5.397360 AGGAGTTGGGTTTCATTTCTCATT 58.603 37.500 0.00 0.00 0.00 2.57
1035 1041 3.704566 AGGGTTTCGCCTTTTTCTTTTCT 59.295 39.130 0.00 0.00 37.43 2.52
1578 3004 0.249699 ACAAATGACAGTCGCCGTGA 60.250 50.000 0.00 0.00 0.00 4.35
1595 3024 2.280524 CCACGAGAAACGGGCACA 60.281 61.111 0.00 0.00 44.90 4.57
1673 3139 1.906574 AGATCTCACCCCAAACGCTTA 59.093 47.619 0.00 0.00 0.00 3.09
1792 3471 5.299279 ACTCAACGATCCAACACTCATTTTT 59.701 36.000 0.00 0.00 0.00 1.94
1849 3610 2.628657 GCACGTAGTATGGAATCTCCCT 59.371 50.000 0.00 0.00 41.61 4.20
1977 3744 2.616765 CCATGTTACCATCCCGTCAACA 60.617 50.000 0.00 0.00 33.96 3.33
2039 3806 3.691342 ACGCCGCTACTGCTTCCA 61.691 61.111 0.00 0.00 36.97 3.53
2060 3830 3.682718 GCCAACTGCATCTGGTACATACT 60.683 47.826 14.03 0.00 37.65 2.12
2248 4078 7.608308 TTTGGAAAAATGAAGTGAACTTTGG 57.392 32.000 0.00 0.00 36.11 3.28
2279 4116 5.240844 GTGCTTGAAAACACTTACAGGGTAT 59.759 40.000 0.00 0.00 27.20 2.73
2323 4161 4.515191 TCATGAAAACTTGTCACTGGTAGC 59.485 41.667 0.00 0.00 0.00 3.58
2378 4218 6.037610 GGAGTAAGCAGAGTATGAATGGTTTG 59.962 42.308 0.00 0.00 36.22 2.93
2379 4219 6.069963 AGGAGTAAGCAGAGTATGAATGGTTT 60.070 38.462 0.00 0.00 36.22 3.27
2484 4346 6.698766 GGTCATTTTCCAGCACATTATCAATC 59.301 38.462 0.00 0.00 0.00 2.67
2489 4351 4.613437 AGGGTCATTTTCCAGCACATTAT 58.387 39.130 0.00 0.00 0.00 1.28
2542 4404 7.312657 TGCAAGTAAAAATGAAAAATGCACA 57.687 28.000 0.00 0.00 36.46 4.57
2547 4409 7.245419 ACGCTTGCAAGTAAAAATGAAAAAT 57.755 28.000 26.55 0.00 0.00 1.82
2549 4411 6.654793 AACGCTTGCAAGTAAAAATGAAAA 57.345 29.167 26.55 0.00 0.00 2.29
2645 4507 0.249120 TTGTGATCCCCGTGCTACAG 59.751 55.000 0.00 0.00 0.00 2.74
2669 4531 1.967319 ATGGCACGGGATAACATCAC 58.033 50.000 0.00 0.00 0.00 3.06
2677 4541 4.288626 ACCTAAATATGTATGGCACGGGAT 59.711 41.667 0.00 0.00 0.00 3.85
2681 4545 7.439955 TGTTTAGACCTAAATATGTATGGCACG 59.560 37.037 5.62 0.00 37.37 5.34
2699 4563 4.694339 ACACACTTCCTGACTGTTTAGAC 58.306 43.478 0.00 0.00 0.00 2.59
2755 4636 7.779798 TGGGAAGCAGCTATATTGTTCTTTTAT 59.220 33.333 0.00 0.00 0.00 1.40
2775 4656 5.650703 ACGGTTATAATTTTCTGGTGGGAAG 59.349 40.000 0.00 0.00 0.00 3.46
2786 4667 8.079809 CCACAAGAACAGAACGGTTATAATTTT 58.920 33.333 0.00 0.00 0.00 1.82
2789 4670 5.123344 GCCACAAGAACAGAACGGTTATAAT 59.877 40.000 0.00 0.00 0.00 1.28
2889 4770 3.207265 TGCACTGACTAAAGAAAGGCA 57.793 42.857 0.00 0.00 32.19 4.75
2918 4799 6.706270 TCCACTAGCTTAAACTGACAGAAAAG 59.294 38.462 10.08 10.08 0.00 2.27
2925 4806 8.443937 CACTAAAATCCACTAGCTTAAACTGAC 58.556 37.037 0.00 0.00 0.00 3.51
2949 4830 1.519408 ACAAGGCACCGTATTGACAC 58.481 50.000 0.00 0.00 0.00 3.67
2984 4865 5.435686 TCCCCGCATAATATGAAGCTTAT 57.564 39.130 4.14 0.00 0.00 1.73
3030 4935 6.618811 ACAAAGAATGCTAAGCAGAGAATTG 58.381 36.000 0.00 0.00 43.65 2.32
3066 4971 9.372369 GGAATATGAGAAAATATACCCTTCTCG 57.628 37.037 12.32 0.00 45.29 4.04
3173 5088 7.713764 ATCATTTTTAGAACTGTTTTGGTGC 57.286 32.000 0.00 0.00 0.00 5.01
3206 5127 7.062605 GGACATGTCATTCAGCAATTTACTTTG 59.937 37.037 26.47 0.00 0.00 2.77
3229 5150 4.643334 ACCAACTACCTCAAAACAAAGGAC 59.357 41.667 0.00 0.00 36.46 3.85
3336 5258 2.058057 CGTGGGCAATAAAACAACTGC 58.942 47.619 0.00 0.00 0.00 4.40
3365 5287 4.635765 TGAGAAGAATGAGCCAATAAACCG 59.364 41.667 0.00 0.00 0.00 4.44
3375 5297 4.511082 GCAAGTCCTATGAGAAGAATGAGC 59.489 45.833 0.00 0.00 0.00 4.26
3423 5345 8.889717 TCATCTTAACTTCCGTTCAATATTTCC 58.110 33.333 0.00 0.00 34.59 3.13
3427 5349 8.840321 CCAATCATCTTAACTTCCGTTCAATAT 58.160 33.333 0.00 0.00 34.59 1.28
3438 5360 5.774690 TGTGAAAGCCCAATCATCTTAACTT 59.225 36.000 0.00 0.00 0.00 2.66
3443 5367 4.401519 CAGATGTGAAAGCCCAATCATCTT 59.598 41.667 8.05 0.00 39.56 2.40
3519 5452 7.222805 TCAAATCACGCTAGCAAACTAATAGAG 59.777 37.037 16.45 0.00 0.00 2.43
3526 5459 6.683974 ATTATCAAATCACGCTAGCAAACT 57.316 33.333 16.45 0.00 0.00 2.66
3534 5527 6.024552 ACCACAAAATTATCAAATCACGCT 57.975 33.333 0.00 0.00 0.00 5.07
3578 5571 8.519526 TGCAGTTTCTTAGTTATTACCATTTGG 58.480 33.333 0.00 0.00 42.17 3.28
3589 5582 4.065088 CTGGCACTGCAGTTTCTTAGTTA 58.935 43.478 18.94 0.00 0.00 2.24
3672 5669 6.410540 ACTTTGTAGCTGAGAAAGAATAGGG 58.589 40.000 16.49 0.00 40.15 3.53
3719 5716 9.073475 TCATCTAATCTAAGGCTAGAGAAAGAC 57.927 37.037 12.89 0.00 37.58 3.01
3764 7197 2.615912 GCTCCAAGAGAAAATCCGGATG 59.384 50.000 19.95 3.79 31.34 3.51
3771 7204 3.526841 AGATCCAGGCTCCAAGAGAAAAT 59.473 43.478 0.00 0.00 0.00 1.82
3799 7232 3.794028 GCTAGTACATCAGCAGAACGAAG 59.206 47.826 8.71 0.00 37.73 3.79
3803 7236 4.748892 TCAAGCTAGTACATCAGCAGAAC 58.251 43.478 14.25 0.00 40.36 3.01
3806 7239 3.493877 GCATCAAGCTAGTACATCAGCAG 59.506 47.826 14.25 8.00 40.36 4.24
3857 7290 7.482654 TGTAGCAAATGGATATTCGAGAAAG 57.517 36.000 0.00 0.00 0.00 2.62
3858 7291 9.208022 CTATGTAGCAAATGGATATTCGAGAAA 57.792 33.333 0.00 0.00 0.00 2.52
3861 7294 9.077674 GTACTATGTAGCAAATGGATATTCGAG 57.922 37.037 0.00 0.00 0.00 4.04
3863 7296 8.757164 TGTACTATGTAGCAAATGGATATTCG 57.243 34.615 0.00 0.00 0.00 3.34
3870 7303 6.649436 CATCGTTGTACTATGTAGCAAATGG 58.351 40.000 0.00 0.00 0.00 3.16
3920 7692 5.576563 TTGGAGGACTGAAACCTTAATGA 57.423 39.130 0.00 0.00 37.93 2.57
3982 7877 3.195396 GGGCTTCAAAATGATTACTGGCA 59.805 43.478 0.00 0.00 0.00 4.92
3983 7878 3.195396 TGGGCTTCAAAATGATTACTGGC 59.805 43.478 0.00 0.00 0.00 4.85
3984 7879 5.404466 TTGGGCTTCAAAATGATTACTGG 57.596 39.130 0.00 0.00 31.46 4.00
4023 7918 6.143758 GCACGGCATGTATATTAAACATTTGG 59.856 38.462 0.00 0.00 35.39 3.28
4026 7921 5.278758 GGGCACGGCATGTATATTAAACATT 60.279 40.000 0.00 0.00 35.39 2.71
4030 7925 3.150767 GGGGCACGGCATGTATATTAAA 58.849 45.455 0.00 0.00 0.00 1.52
4034 7929 0.036732 CAGGGGCACGGCATGTATAT 59.963 55.000 0.00 0.00 0.00 0.86
4036 7931 2.192979 CAGGGGCACGGCATGTAT 59.807 61.111 0.00 0.00 0.00 2.29
4082 7977 4.757657 GTCATGTGTGGTGGTACATTTGTA 59.242 41.667 0.00 0.00 44.52 2.41
4083 7978 3.568007 GTCATGTGTGGTGGTACATTTGT 59.432 43.478 0.00 0.00 44.52 2.83
4084 7979 3.057596 GGTCATGTGTGGTGGTACATTTG 60.058 47.826 0.00 0.00 44.52 2.32
4085 7980 3.153919 GGTCATGTGTGGTGGTACATTT 58.846 45.455 0.00 0.00 44.52 2.32
4086 7981 2.790433 GGTCATGTGTGGTGGTACATT 58.210 47.619 0.00 0.00 44.52 2.71
4087 7982 1.338674 CGGTCATGTGTGGTGGTACAT 60.339 52.381 0.00 0.00 44.52 2.29
4088 7983 0.034198 CGGTCATGTGTGGTGGTACA 59.966 55.000 0.00 0.00 0.00 2.90
4089 7984 0.672401 CCGGTCATGTGTGGTGGTAC 60.672 60.000 0.00 0.00 0.00 3.34
4090 7985 1.122632 ACCGGTCATGTGTGGTGGTA 61.123 55.000 0.00 0.00 32.33 3.25
4091 7986 1.122632 TACCGGTCATGTGTGGTGGT 61.123 55.000 12.40 7.56 35.93 4.16
4092 7987 0.672401 GTACCGGTCATGTGTGGTGG 60.672 60.000 12.40 2.77 35.93 4.61
4093 7988 1.011968 CGTACCGGTCATGTGTGGTG 61.012 60.000 12.40 0.00 35.93 4.17
4094 7989 1.290955 CGTACCGGTCATGTGTGGT 59.709 57.895 12.40 9.72 38.51 4.16
4095 7990 2.098233 GCGTACCGGTCATGTGTGG 61.098 63.158 12.40 0.00 0.00 4.17
4096 7991 2.098233 GGCGTACCGGTCATGTGTG 61.098 63.158 12.40 0.00 0.00 3.82
4097 7992 1.823169 AAGGCGTACCGGTCATGTGT 61.823 55.000 12.40 0.00 42.76 3.72
4098 7993 1.079405 AAGGCGTACCGGTCATGTG 60.079 57.895 12.40 0.00 42.76 3.21
4106 8001 2.058798 CATATACTGCAAGGCGTACCG 58.941 52.381 0.00 0.00 42.76 4.02
4123 8018 2.481441 AGGCCACCAGAGATGAACATA 58.519 47.619 5.01 0.00 0.00 2.29
4131 8026 2.375174 ACAAACAATAGGCCACCAGAGA 59.625 45.455 5.01 0.00 0.00 3.10
4148 8043 2.164422 TGACATGCAACAACCGAACAAA 59.836 40.909 0.00 0.00 0.00 2.83
4188 8083 6.815641 TCACAACACAAGTTAACATGCAAATT 59.184 30.769 10.62 0.00 35.85 1.82
4189 8084 6.336566 TCACAACACAAGTTAACATGCAAAT 58.663 32.000 10.62 0.00 35.85 2.32
4200 8095 5.350633 CCATGTTTGATCACAACACAAGTT 58.649 37.500 19.09 6.74 38.88 2.66
4202 8097 4.037803 TCCCATGTTTGATCACAACACAAG 59.962 41.667 19.09 13.95 35.63 3.16
4203 8098 3.956848 TCCCATGTTTGATCACAACACAA 59.043 39.130 19.09 0.00 35.63 3.33
4204 8099 3.560105 TCCCATGTTTGATCACAACACA 58.440 40.909 19.09 10.64 35.63 3.72
4205 8100 4.582701 TTCCCATGTTTGATCACAACAC 57.417 40.909 19.09 6.22 35.63 3.32
4206 8101 5.604758 TTTTCCCATGTTTGATCACAACA 57.395 34.783 19.03 19.03 35.63 3.33
4209 8104 7.363705 GGTGATATTTTCCCATGTTTGATCACA 60.364 37.037 11.89 0.00 41.43 3.58
4210 8105 6.980397 GGTGATATTTTCCCATGTTTGATCAC 59.020 38.462 0.00 0.00 39.79 3.06
4213 8108 5.656416 ACGGTGATATTTTCCCATGTTTGAT 59.344 36.000 0.00 0.00 0.00 2.57
4215 8110 5.323371 ACGGTGATATTTTCCCATGTTTG 57.677 39.130 0.00 0.00 0.00 2.93
4220 8115 4.243793 TCCAACGGTGATATTTTCCCAT 57.756 40.909 0.00 0.00 0.00 4.00
4223 8118 3.380320 CCCTTCCAACGGTGATATTTTCC 59.620 47.826 0.00 0.00 0.00 3.13
4224 8119 4.266714 TCCCTTCCAACGGTGATATTTTC 58.733 43.478 0.00 0.00 0.00 2.29
4225 8120 4.270008 CTCCCTTCCAACGGTGATATTTT 58.730 43.478 0.00 0.00 0.00 1.82
4227 8122 2.421529 GCTCCCTTCCAACGGTGATATT 60.422 50.000 0.00 0.00 0.00 1.28
4230 8125 1.201429 AGCTCCCTTCCAACGGTGAT 61.201 55.000 0.00 0.00 0.00 3.06
4232 8127 1.376037 GAGCTCCCTTCCAACGGTG 60.376 63.158 0.87 0.00 0.00 4.94
4233 8128 1.128188 AAGAGCTCCCTTCCAACGGT 61.128 55.000 10.93 0.00 0.00 4.83
4234 8129 0.674895 CAAGAGCTCCCTTCCAACGG 60.675 60.000 10.93 0.00 0.00 4.44
4235 8130 0.674895 CCAAGAGCTCCCTTCCAACG 60.675 60.000 10.93 0.00 0.00 4.10
4236 8131 0.322906 CCCAAGAGCTCCCTTCCAAC 60.323 60.000 10.93 0.00 0.00 3.77
4237 8132 2.078452 CCCAAGAGCTCCCTTCCAA 58.922 57.895 10.93 0.00 0.00 3.53
4238 8133 2.606587 GCCCAAGAGCTCCCTTCCA 61.607 63.158 10.93 0.00 0.00 3.53
4239 8134 2.273776 GCCCAAGAGCTCCCTTCC 59.726 66.667 10.93 0.00 0.00 3.46
4241 8136 2.607750 TCGCCCAAGAGCTCCCTT 60.608 61.111 10.93 0.00 0.00 3.95
4242 8137 3.394836 GTCGCCCAAGAGCTCCCT 61.395 66.667 10.93 0.00 0.00 4.20
4243 8138 3.706373 TGTCGCCCAAGAGCTCCC 61.706 66.667 10.93 0.00 0.00 4.30
4244 8139 2.435059 GTGTCGCCCAAGAGCTCC 60.435 66.667 10.93 0.00 0.00 4.70
4245 8140 2.811317 CGTGTCGCCCAAGAGCTC 60.811 66.667 5.27 5.27 0.00 4.09
4246 8141 4.379243 CCGTGTCGCCCAAGAGCT 62.379 66.667 0.00 0.00 0.00 4.09
4289 9831 2.654079 CCCGCCAGAGAGCAGAAGT 61.654 63.158 0.00 0.00 0.00 3.01
4294 9836 3.393970 CCTTCCCGCCAGAGAGCA 61.394 66.667 0.00 0.00 0.00 4.26
4296 9838 2.430610 CCTCCTTCCCGCCAGAGAG 61.431 68.421 0.00 0.00 0.00 3.20
4297 9839 2.364317 CCTCCTTCCCGCCAGAGA 60.364 66.667 0.00 0.00 0.00 3.10
4298 9840 2.685380 ACCTCCTTCCCGCCAGAG 60.685 66.667 0.00 0.00 0.00 3.35
4299 9841 3.003173 CACCTCCTTCCCGCCAGA 61.003 66.667 0.00 0.00 0.00 3.86
4302 9844 3.003763 AGACACCTCCTTCCCGCC 61.004 66.667 0.00 0.00 0.00 6.13
4303 9845 2.579738 GAGACACCTCCTTCCCGC 59.420 66.667 0.00 0.00 33.30 6.13
4315 9857 1.257750 ATACGTGCCAGCAGGAGACA 61.258 55.000 18.35 2.09 36.89 3.41
4316 9858 0.807667 CATACGTGCCAGCAGGAGAC 60.808 60.000 18.35 0.00 36.89 3.36
4317 9859 1.517361 CATACGTGCCAGCAGGAGA 59.483 57.895 18.35 6.73 36.89 3.71
4318 9860 1.522355 CCATACGTGCCAGCAGGAG 60.522 63.158 18.35 7.94 36.89 3.69
4319 9861 2.584064 CCATACGTGCCAGCAGGA 59.416 61.111 18.35 3.59 36.89 3.86
4321 9863 3.566853 CGCCATACGTGCCAGCAG 61.567 66.667 0.00 0.00 36.87 4.24
4328 9870 3.572539 AATGCGGCGCCATACGTG 61.573 61.111 30.82 10.13 46.11 4.49
4329 9871 3.572539 CAATGCGGCGCCATACGT 61.573 61.111 30.82 13.80 46.11 3.57
4332 9874 3.585020 CAGCAATGCGGCGCCATA 61.585 61.111 30.82 15.30 39.27 2.74
4335 9877 4.842091 CTTCAGCAATGCGGCGCC 62.842 66.667 30.82 19.07 39.27 6.53
4336 9878 4.842091 CCTTCAGCAATGCGGCGC 62.842 66.667 27.44 27.44 39.27 6.53
4338 9880 3.830192 CCCCTTCAGCAATGCGGC 61.830 66.667 0.00 0.00 0.00 6.53
4339 9881 3.142838 CCCCCTTCAGCAATGCGG 61.143 66.667 0.00 0.00 0.00 5.69
4341 9883 3.830192 CGCCCCCTTCAGCAATGC 61.830 66.667 0.00 0.00 0.00 3.56
4342 9884 3.830192 GCGCCCCCTTCAGCAATG 61.830 66.667 0.00 0.00 0.00 2.82
4343 9885 3.884704 TTGCGCCCCCTTCAGCAAT 62.885 57.895 4.18 0.00 43.55 3.56
4344 9886 4.594854 TTGCGCCCCCTTCAGCAA 62.595 61.111 4.18 0.00 45.79 3.91
4346 9888 3.068729 GATTTGCGCCCCCTTCAGC 62.069 63.158 4.18 0.00 0.00 4.26
4348 9890 1.378514 GAGATTTGCGCCCCCTTCA 60.379 57.895 4.18 0.00 0.00 3.02
4350 9892 2.043953 GGAGATTTGCGCCCCCTT 60.044 61.111 4.18 0.00 0.00 3.95
4351 9893 3.017581 AGGAGATTTGCGCCCCCT 61.018 61.111 4.18 0.00 37.12 4.79
4354 9896 2.897350 CCGAGGAGATTTGCGCCC 60.897 66.667 4.18 0.00 37.12 6.13
4356 9898 2.512515 AGCCGAGGAGATTTGCGC 60.513 61.111 0.00 0.00 0.00 6.09
4359 9901 1.068434 GGAGAGAGCCGAGGAGATTTG 59.932 57.143 0.00 0.00 0.00 2.32
4360 9902 1.063266 AGGAGAGAGCCGAGGAGATTT 60.063 52.381 0.00 0.00 0.00 2.17
4361 9903 0.555769 AGGAGAGAGCCGAGGAGATT 59.444 55.000 0.00 0.00 0.00 2.40
4362 9904 0.110486 GAGGAGAGAGCCGAGGAGAT 59.890 60.000 0.00 0.00 0.00 2.75
4363 9905 1.529796 GAGGAGAGAGCCGAGGAGA 59.470 63.158 0.00 0.00 0.00 3.71
4365 9907 2.190843 CGAGGAGAGAGCCGAGGA 59.809 66.667 0.00 0.00 0.00 3.71
4366 9908 2.190843 TCGAGGAGAGAGCCGAGG 59.809 66.667 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.