Multiple sequence alignment - TraesCS7B01G074800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G074800 chr7B 100.000 2969 0 0 1 2969 84381149 84378181 0.000000e+00 5483
1 TraesCS7B01G074800 chr7B 93.162 117 8 0 460 576 116487413 116487529 3.930000e-39 172
2 TraesCS7B01G074800 chr7D 94.699 2377 102 11 597 2968 123164180 123161823 0.000000e+00 3670
3 TraesCS7B01G074800 chr7A 92.917 1440 59 9 711 2142 126116793 126115389 0.000000e+00 2054
4 TraesCS7B01G074800 chr7A 83.955 804 108 8 2183 2969 126114221 126113422 0.000000e+00 750
5 TraesCS7B01G074800 chr2D 86.111 360 45 4 25 381 643954709 643954352 1.670000e-102 383
6 TraesCS7B01G074800 chr2D 85.255 373 52 3 13 384 590024517 590024147 6.010000e-102 381
7 TraesCS7B01G074800 chr2D 92.500 120 9 0 460 579 95519542 95519661 3.930000e-39 172
8 TraesCS7B01G074800 chr3A 84.252 381 57 3 1 380 749638184 749638562 4.680000e-98 368
9 TraesCS7B01G074800 chr3A 84.967 153 20 3 431 580 24733315 24733467 5.130000e-33 152
10 TraesCS7B01G074800 chr6A 84.197 386 51 9 1 381 614390669 614390289 1.680000e-97 366
11 TraesCS7B01G074800 chr6A 83.812 383 54 8 1 379 613897023 613897401 1.010000e-94 357
12 TraesCS7B01G074800 chr2A 84.293 382 53 7 1 381 726767576 726767951 1.680000e-97 366
13 TraesCS7B01G074800 chr2A 82.368 380 64 3 1 379 745007847 745008224 7.930000e-86 327
14 TraesCS7B01G074800 chr5A 83.123 397 60 6 1 393 70664731 70664338 3.640000e-94 355
15 TraesCS7B01G074800 chr1B 83.551 383 59 3 1 380 457855210 457855591 3.640000e-94 355
16 TraesCS7B01G074800 chr2B 88.811 143 14 2 448 590 569019567 569019707 1.090000e-39 174
17 TraesCS7B01G074800 chr1D 90.840 131 11 1 463 592 284915943 284915813 1.090000e-39 174
18 TraesCS7B01G074800 chr4D 91.935 124 9 1 457 579 72256250 72256127 3.930000e-39 172
19 TraesCS7B01G074800 chr5B 91.200 125 11 0 463 587 407639557 407639433 1.420000e-38 171
20 TraesCS7B01G074800 chr6D 91.803 122 9 1 459 580 136474715 136474595 5.090000e-38 169
21 TraesCS7B01G074800 chr3B 91.057 123 11 0 454 576 556520660 556520782 1.830000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G074800 chr7B 84378181 84381149 2968 True 5483 5483 100.000 1 2969 1 chr7B.!!$R1 2968
1 TraesCS7B01G074800 chr7D 123161823 123164180 2357 True 3670 3670 94.699 597 2968 1 chr7D.!!$R1 2371
2 TraesCS7B01G074800 chr7A 126113422 126116793 3371 True 1402 2054 88.436 711 2969 2 chr7A.!!$R1 2258

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
577 578 0.038744 TTCCGGACGAAGGGAGTACT 59.961 55.0 1.83 0.0 33.01 2.73 F
653 654 0.598680 ACACTCTCGCACAGCACTTC 60.599 55.0 0.00 0.0 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1884 1891 0.105778 TGCCACGACTGACATTGTCA 59.894 50.0 18.08 18.08 40.50 3.58 R
2536 3679 0.252467 CCTTCTCTGGGTCCTCCACT 60.252 60.0 0.00 0.00 41.46 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.225682 ACCCTATCAAGTGGAAATTTATCTAGA 57.774 33.333 0.00 0.00 0.00 2.43
49 50 9.706529 ATCTAGAATATCCCTTTTGAAAGCTTT 57.293 29.630 12.53 12.53 34.69 3.51
50 51 8.960591 TCTAGAATATCCCTTTTGAAAGCTTTG 58.039 33.333 18.30 1.01 34.69 2.77
51 52 6.939622 AGAATATCCCTTTTGAAAGCTTTGG 58.060 36.000 18.30 10.95 34.69 3.28
52 53 6.725834 AGAATATCCCTTTTGAAAGCTTTGGA 59.274 34.615 18.30 15.78 34.69 3.53
53 54 4.607293 ATCCCTTTTGAAAGCTTTGGAC 57.393 40.909 18.30 2.61 34.69 4.02
54 55 2.698274 TCCCTTTTGAAAGCTTTGGACC 59.302 45.455 18.30 2.21 34.69 4.46
55 56 2.224281 CCCTTTTGAAAGCTTTGGACCC 60.224 50.000 18.30 1.79 34.69 4.46
56 57 2.700371 CCTTTTGAAAGCTTTGGACCCT 59.300 45.455 18.30 0.00 34.69 4.34
57 58 3.243873 CCTTTTGAAAGCTTTGGACCCTC 60.244 47.826 18.30 0.12 34.69 4.30
58 59 1.604604 TTGAAAGCTTTGGACCCTCG 58.395 50.000 18.30 0.00 0.00 4.63
59 60 0.472471 TGAAAGCTTTGGACCCTCGT 59.528 50.000 18.30 0.00 0.00 4.18
60 61 1.133915 TGAAAGCTTTGGACCCTCGTT 60.134 47.619 18.30 0.00 0.00 3.85
61 62 1.954382 GAAAGCTTTGGACCCTCGTTT 59.046 47.619 18.30 0.00 0.00 3.60
62 63 2.067365 AAGCTTTGGACCCTCGTTTT 57.933 45.000 0.00 0.00 0.00 2.43
63 64 1.605753 AGCTTTGGACCCTCGTTTTC 58.394 50.000 0.00 0.00 0.00 2.29
64 65 1.143073 AGCTTTGGACCCTCGTTTTCT 59.857 47.619 0.00 0.00 0.00 2.52
65 66 2.370849 AGCTTTGGACCCTCGTTTTCTA 59.629 45.455 0.00 0.00 0.00 2.10
66 67 2.742589 GCTTTGGACCCTCGTTTTCTAG 59.257 50.000 0.00 0.00 0.00 2.43
67 68 3.806157 GCTTTGGACCCTCGTTTTCTAGT 60.806 47.826 0.00 0.00 0.00 2.57
68 69 3.396260 TTGGACCCTCGTTTTCTAGTG 57.604 47.619 0.00 0.00 0.00 2.74
69 70 1.001633 TGGACCCTCGTTTTCTAGTGC 59.998 52.381 0.00 0.00 0.00 4.40
70 71 1.347320 GACCCTCGTTTTCTAGTGCG 58.653 55.000 0.00 0.00 0.00 5.34
71 72 0.677842 ACCCTCGTTTTCTAGTGCGT 59.322 50.000 0.00 0.00 0.00 5.24
72 73 1.068474 CCCTCGTTTTCTAGTGCGTG 58.932 55.000 0.00 0.00 0.00 5.34
73 74 1.604693 CCCTCGTTTTCTAGTGCGTGT 60.605 52.381 0.00 0.00 0.00 4.49
74 75 1.719780 CCTCGTTTTCTAGTGCGTGTC 59.280 52.381 0.00 0.00 0.00 3.67
75 76 1.719780 CTCGTTTTCTAGTGCGTGTCC 59.280 52.381 0.00 0.00 0.00 4.02
76 77 1.067364 TCGTTTTCTAGTGCGTGTCCA 59.933 47.619 0.00 0.00 0.00 4.02
77 78 2.066262 CGTTTTCTAGTGCGTGTCCAT 58.934 47.619 0.00 0.00 0.00 3.41
78 79 3.057386 TCGTTTTCTAGTGCGTGTCCATA 60.057 43.478 0.00 0.00 0.00 2.74
79 80 3.303495 CGTTTTCTAGTGCGTGTCCATAG 59.697 47.826 0.00 0.00 0.00 2.23
80 81 3.520290 TTTCTAGTGCGTGTCCATAGG 57.480 47.619 0.00 0.00 0.00 2.57
81 82 0.744874 TCTAGTGCGTGTCCATAGGC 59.255 55.000 0.00 0.00 0.00 3.93
82 83 0.459899 CTAGTGCGTGTCCATAGGCA 59.540 55.000 0.00 0.00 38.93 4.75
83 84 0.899019 TAGTGCGTGTCCATAGGCAA 59.101 50.000 0.00 0.00 42.29 4.52
84 85 0.391661 AGTGCGTGTCCATAGGCAAG 60.392 55.000 0.00 0.00 42.29 4.01
85 86 1.078497 TGCGTGTCCATAGGCAAGG 60.078 57.895 0.00 0.00 38.37 3.61
86 87 1.078426 GCGTGTCCATAGGCAAGGT 60.078 57.895 0.00 0.00 0.00 3.50
87 88 1.369091 GCGTGTCCATAGGCAAGGTG 61.369 60.000 0.00 0.00 0.00 4.00
88 89 1.369091 CGTGTCCATAGGCAAGGTGC 61.369 60.000 0.00 0.00 44.08 5.01
89 90 1.078497 TGTCCATAGGCAAGGTGCG 60.078 57.895 0.00 0.00 46.21 5.34
90 91 1.220749 GTCCATAGGCAAGGTGCGA 59.779 57.895 0.00 0.00 46.21 5.10
91 92 0.811616 GTCCATAGGCAAGGTGCGAG 60.812 60.000 0.00 0.00 46.21 5.03
92 93 1.524621 CCATAGGCAAGGTGCGAGG 60.525 63.158 0.00 0.00 46.21 4.63
93 94 1.221840 CATAGGCAAGGTGCGAGGT 59.778 57.895 0.00 0.00 46.21 3.85
94 95 1.091771 CATAGGCAAGGTGCGAGGTG 61.092 60.000 0.00 0.00 46.21 4.00
95 96 1.264749 ATAGGCAAGGTGCGAGGTGA 61.265 55.000 0.00 0.00 46.21 4.02
96 97 2.167398 TAGGCAAGGTGCGAGGTGAC 62.167 60.000 0.00 0.00 46.21 3.67
97 98 3.414700 GCAAGGTGCGAGGTGACG 61.415 66.667 0.00 0.00 31.71 4.35
122 123 3.775661 GGGACCAAAAATATGTGGACG 57.224 47.619 7.22 0.00 38.36 4.79
123 124 2.159296 GGGACCAAAAATATGTGGACGC 60.159 50.000 7.22 5.95 38.36 5.19
124 125 2.159296 GGACCAAAAATATGTGGACGCC 60.159 50.000 7.22 3.06 38.36 5.68
125 126 1.470890 ACCAAAAATATGTGGACGCCG 59.529 47.619 7.22 0.00 38.36 6.46
126 127 1.740585 CCAAAAATATGTGGACGCCGA 59.259 47.619 0.00 0.00 37.03 5.54
127 128 2.477189 CCAAAAATATGTGGACGCCGAC 60.477 50.000 0.00 0.00 37.03 4.79
129 130 0.173935 AAATATGTGGACGCCGACGA 59.826 50.000 0.00 0.00 43.93 4.20
130 131 0.248907 AATATGTGGACGCCGACGAG 60.249 55.000 0.00 0.00 43.93 4.18
131 132 2.071844 ATATGTGGACGCCGACGAGG 62.072 60.000 0.00 0.00 43.93 4.63
133 134 4.047059 GTGGACGCCGACGAGGAA 62.047 66.667 0.00 0.00 45.00 3.36
134 135 3.066190 TGGACGCCGACGAGGAAT 61.066 61.111 0.00 0.00 45.00 3.01
135 136 2.582498 GGACGCCGACGAGGAATG 60.582 66.667 0.00 0.00 45.00 2.67
136 137 2.582498 GACGCCGACGAGGAATGG 60.582 66.667 0.00 0.00 45.00 3.16
137 138 3.060020 GACGCCGACGAGGAATGGA 62.060 63.158 0.00 0.00 45.00 3.41
138 139 2.183300 CGCCGACGAGGAATGGAA 59.817 61.111 0.00 0.00 45.00 3.53
139 140 2.165301 CGCCGACGAGGAATGGAAC 61.165 63.158 0.00 0.00 45.00 3.62
140 141 1.079405 GCCGACGAGGAATGGAACA 60.079 57.895 0.00 0.00 44.47 3.18
141 142 0.462047 GCCGACGAGGAATGGAACAT 60.462 55.000 0.00 0.00 44.29 2.71
142 143 1.202486 GCCGACGAGGAATGGAACATA 60.202 52.381 0.00 0.00 44.29 2.29
143 144 2.548067 GCCGACGAGGAATGGAACATAT 60.548 50.000 0.00 0.00 44.29 1.78
144 145 3.305813 GCCGACGAGGAATGGAACATATA 60.306 47.826 0.00 0.00 44.29 0.86
145 146 4.486090 CCGACGAGGAATGGAACATATAG 58.514 47.826 0.00 0.00 44.29 1.31
146 147 4.217767 CCGACGAGGAATGGAACATATAGA 59.782 45.833 0.00 0.00 44.29 1.98
147 148 5.846834 CCGACGAGGAATGGAACATATAGAC 60.847 48.000 0.00 0.00 44.29 2.59
148 149 8.176385 CCGACGAGGAATGGAACATATAGACA 62.176 46.154 0.00 0.00 44.29 3.41
149 150 9.548472 CCGACGAGGAATGGAACATATAGACAA 62.548 44.444 0.00 0.00 44.29 3.18
159 160 8.001881 TGGAACATATAGACAAGAGAAGTCTC 57.998 38.462 0.00 0.00 44.70 3.36
160 161 7.615757 TGGAACATATAGACAAGAGAAGTCTCA 59.384 37.037 10.83 0.00 44.70 3.27
161 162 7.918562 GGAACATATAGACAAGAGAAGTCTCAC 59.081 40.741 10.83 0.21 44.70 3.51
162 163 7.946381 ACATATAGACAAGAGAAGTCTCACA 57.054 36.000 10.83 0.00 44.70 3.58
163 164 7.767261 ACATATAGACAAGAGAAGTCTCACAC 58.233 38.462 10.83 0.20 44.70 3.82
164 165 7.394641 ACATATAGACAAGAGAAGTCTCACACA 59.605 37.037 10.83 0.00 44.70 3.72
165 166 6.849085 ATAGACAAGAGAAGTCTCACACAT 57.151 37.500 10.83 0.00 44.70 3.21
166 167 4.880759 AGACAAGAGAAGTCTCACACATG 58.119 43.478 10.83 0.00 42.40 3.21
167 168 4.586421 AGACAAGAGAAGTCTCACACATGA 59.414 41.667 10.83 0.00 42.40 3.07
168 169 5.245751 AGACAAGAGAAGTCTCACACATGAT 59.754 40.000 10.83 0.00 42.40 2.45
169 170 5.477510 ACAAGAGAAGTCTCACACATGATC 58.522 41.667 10.83 0.00 45.21 2.92
170 171 5.011431 ACAAGAGAAGTCTCACACATGATCA 59.989 40.000 10.83 0.00 45.21 2.92
171 172 5.936187 AGAGAAGTCTCACACATGATCAT 57.064 39.130 10.83 1.18 45.21 2.45
172 173 5.904941 AGAGAAGTCTCACACATGATCATC 58.095 41.667 4.86 0.00 45.21 2.92
173 174 5.421374 AGAGAAGTCTCACACATGATCATCA 59.579 40.000 4.86 0.00 45.21 3.07
174 175 6.046290 AGAAGTCTCACACATGATCATCAA 57.954 37.500 4.86 0.00 33.22 2.57
175 176 6.651086 AGAAGTCTCACACATGATCATCAAT 58.349 36.000 4.86 0.00 33.22 2.57
176 177 6.539103 AGAAGTCTCACACATGATCATCAATG 59.461 38.462 4.86 7.36 33.22 2.82
177 178 5.742063 AGTCTCACACATGATCATCAATGT 58.258 37.500 4.86 8.00 33.22 2.71
178 179 6.178324 AGTCTCACACATGATCATCAATGTT 58.822 36.000 4.86 0.00 33.22 2.71
179 180 6.093633 AGTCTCACACATGATCATCAATGTTG 59.906 38.462 4.86 6.49 33.22 3.33
180 181 4.989044 TCACACATGATCATCAATGTTGC 58.011 39.130 4.86 0.00 30.33 4.17
181 182 4.109766 CACACATGATCATCAATGTTGCC 58.890 43.478 4.86 0.00 30.33 4.52
182 183 3.131577 ACACATGATCATCAATGTTGCCC 59.868 43.478 4.86 0.00 28.93 5.36
183 184 3.383505 CACATGATCATCAATGTTGCCCT 59.616 43.478 4.86 0.00 0.00 5.19
184 185 3.635373 ACATGATCATCAATGTTGCCCTC 59.365 43.478 4.86 0.00 0.00 4.30
185 186 3.657398 TGATCATCAATGTTGCCCTCT 57.343 42.857 0.00 0.00 0.00 3.69
186 187 3.284617 TGATCATCAATGTTGCCCTCTG 58.715 45.455 0.00 0.00 0.00 3.35
187 188 3.054213 TGATCATCAATGTTGCCCTCTGA 60.054 43.478 0.00 0.00 0.00 3.27
188 189 3.657398 TCATCAATGTTGCCCTCTGAT 57.343 42.857 0.00 0.00 0.00 2.90
189 190 3.548770 TCATCAATGTTGCCCTCTGATC 58.451 45.455 0.00 0.00 0.00 2.92
190 191 3.201487 TCATCAATGTTGCCCTCTGATCT 59.799 43.478 0.00 0.00 0.00 2.75
191 192 3.726557 TCAATGTTGCCCTCTGATCTT 57.273 42.857 0.00 0.00 0.00 2.40
192 193 4.038271 TCAATGTTGCCCTCTGATCTTT 57.962 40.909 0.00 0.00 0.00 2.52
193 194 5.178096 TCAATGTTGCCCTCTGATCTTTA 57.822 39.130 0.00 0.00 0.00 1.85
194 195 4.943705 TCAATGTTGCCCTCTGATCTTTAC 59.056 41.667 0.00 0.00 0.00 2.01
195 196 4.574674 ATGTTGCCCTCTGATCTTTACA 57.425 40.909 0.00 0.00 0.00 2.41
196 197 3.674997 TGTTGCCCTCTGATCTTTACAC 58.325 45.455 0.00 0.00 0.00 2.90
197 198 3.072330 TGTTGCCCTCTGATCTTTACACA 59.928 43.478 0.00 0.00 0.00 3.72
198 199 4.263462 TGTTGCCCTCTGATCTTTACACAT 60.263 41.667 0.00 0.00 0.00 3.21
199 200 5.045942 TGTTGCCCTCTGATCTTTACACATA 60.046 40.000 0.00 0.00 0.00 2.29
200 201 5.894298 TGCCCTCTGATCTTTACACATAT 57.106 39.130 0.00 0.00 0.00 1.78
201 202 6.252599 TGCCCTCTGATCTTTACACATATT 57.747 37.500 0.00 0.00 0.00 1.28
202 203 6.662755 TGCCCTCTGATCTTTACACATATTT 58.337 36.000 0.00 0.00 0.00 1.40
203 204 7.118723 TGCCCTCTGATCTTTACACATATTTT 58.881 34.615 0.00 0.00 0.00 1.82
204 205 7.615365 TGCCCTCTGATCTTTACACATATTTTT 59.385 33.333 0.00 0.00 0.00 1.94
205 206 9.120538 GCCCTCTGATCTTTACACATATTTTTA 57.879 33.333 0.00 0.00 0.00 1.52
224 225 8.903570 ATTTTTATAAATCATTGACGCGACAA 57.096 26.923 24.84 24.84 27.57 3.18
225 226 8.903570 TTTTTATAAATCATTGACGCGACAAT 57.096 26.923 26.87 26.87 40.50 2.71
228 229 4.365287 CATTGACGCGACAATGCC 57.635 55.556 37.25 10.76 46.30 4.40
229 230 1.501292 CATTGACGCGACAATGCCA 59.499 52.632 37.25 15.39 46.30 4.92
230 231 0.099259 CATTGACGCGACAATGCCAT 59.901 50.000 37.25 17.44 46.30 4.40
231 232 0.810648 ATTGACGCGACAATGCCATT 59.189 45.000 30.44 10.98 38.76 3.16
232 233 0.167908 TTGACGCGACAATGCCATTC 59.832 50.000 19.59 0.00 0.00 2.67
233 234 1.062525 GACGCGACAATGCCATTCC 59.937 57.895 15.93 0.00 0.00 3.01
234 235 1.369091 GACGCGACAATGCCATTCCT 61.369 55.000 15.93 0.00 0.00 3.36
235 236 0.107897 ACGCGACAATGCCATTCCTA 60.108 50.000 15.93 0.00 0.00 2.94
236 237 1.229428 CGCGACAATGCCATTCCTAT 58.771 50.000 0.00 0.00 0.00 2.57
237 238 1.195448 CGCGACAATGCCATTCCTATC 59.805 52.381 0.00 0.00 0.00 2.08
238 239 2.498167 GCGACAATGCCATTCCTATCT 58.502 47.619 0.00 0.00 0.00 1.98
239 240 3.664107 GCGACAATGCCATTCCTATCTA 58.336 45.455 0.00 0.00 0.00 1.98
240 241 4.065088 GCGACAATGCCATTCCTATCTAA 58.935 43.478 0.00 0.00 0.00 2.10
241 242 4.083802 GCGACAATGCCATTCCTATCTAAC 60.084 45.833 0.00 0.00 0.00 2.34
242 243 5.056480 CGACAATGCCATTCCTATCTAACA 58.944 41.667 0.00 0.00 0.00 2.41
243 244 5.702670 CGACAATGCCATTCCTATCTAACAT 59.297 40.000 0.00 0.00 0.00 2.71
244 245 6.873605 CGACAATGCCATTCCTATCTAACATA 59.126 38.462 0.00 0.00 0.00 2.29
245 246 7.387673 CGACAATGCCATTCCTATCTAACATAA 59.612 37.037 0.00 0.00 0.00 1.90
246 247 8.995027 ACAATGCCATTCCTATCTAACATAAA 57.005 30.769 0.00 0.00 0.00 1.40
247 248 9.592196 ACAATGCCATTCCTATCTAACATAAAT 57.408 29.630 0.00 0.00 0.00 1.40
280 281 4.757019 AAAAATGGGGTAAAACCGTGTT 57.243 36.364 0.00 0.00 39.83 3.32
281 282 5.866159 AAAAATGGGGTAAAACCGTGTTA 57.134 34.783 0.00 0.00 39.83 2.41
282 283 5.866159 AAAATGGGGTAAAACCGTGTTAA 57.134 34.783 0.00 0.00 39.83 2.01
283 284 5.866159 AAATGGGGTAAAACCGTGTTAAA 57.134 34.783 0.00 0.00 39.83 1.52
284 285 5.866159 AATGGGGTAAAACCGTGTTAAAA 57.134 34.783 0.00 0.00 39.83 1.52
285 286 4.915158 TGGGGTAAAACCGTGTTAAAAG 57.085 40.909 0.00 0.00 39.83 2.27
286 287 4.276642 TGGGGTAAAACCGTGTTAAAAGT 58.723 39.130 0.00 0.00 39.83 2.66
287 288 4.337836 TGGGGTAAAACCGTGTTAAAAGTC 59.662 41.667 0.00 0.00 39.83 3.01
288 289 4.580167 GGGGTAAAACCGTGTTAAAAGTCT 59.420 41.667 0.00 0.00 39.83 3.24
289 290 5.277974 GGGGTAAAACCGTGTTAAAAGTCTC 60.278 44.000 0.00 0.00 39.83 3.36
290 291 5.528690 GGGTAAAACCGTGTTAAAAGTCTCT 59.471 40.000 0.00 0.00 39.83 3.10
291 292 6.705825 GGGTAAAACCGTGTTAAAAGTCTCTA 59.294 38.462 0.00 0.00 39.83 2.43
292 293 7.226523 GGGTAAAACCGTGTTAAAAGTCTCTAA 59.773 37.037 0.00 0.00 39.83 2.10
293 294 8.611757 GGTAAAACCGTGTTAAAAGTCTCTAAA 58.388 33.333 0.00 0.00 0.00 1.85
294 295 9.986833 GTAAAACCGTGTTAAAAGTCTCTAAAA 57.013 29.630 0.00 0.00 0.00 1.52
296 297 9.726232 AAAACCGTGTTAAAAGTCTCTAAAATC 57.274 29.630 0.00 0.00 0.00 2.17
297 298 8.441312 AACCGTGTTAAAAGTCTCTAAAATCA 57.559 30.769 0.00 0.00 0.00 2.57
298 299 8.084590 ACCGTGTTAAAAGTCTCTAAAATCAG 57.915 34.615 0.00 0.00 0.00 2.90
299 300 7.929785 ACCGTGTTAAAAGTCTCTAAAATCAGA 59.070 33.333 0.00 0.00 0.00 3.27
300 301 8.936864 CCGTGTTAAAAGTCTCTAAAATCAGAT 58.063 33.333 0.00 0.00 0.00 2.90
318 319 8.737168 AATCAGATATTTCGATTGAAGTTCCA 57.263 30.769 0.00 0.00 35.06 3.53
319 320 7.539712 TCAGATATTTCGATTGAAGTTCCAC 57.460 36.000 0.00 0.00 35.06 4.02
320 321 7.331026 TCAGATATTTCGATTGAAGTTCCACT 58.669 34.615 0.00 0.00 35.06 4.00
321 322 7.824289 TCAGATATTTCGATTGAAGTTCCACTT 59.176 33.333 0.00 0.00 41.95 3.16
322 323 9.098355 CAGATATTTCGATTGAAGTTCCACTTA 57.902 33.333 0.00 0.00 38.80 2.24
323 324 9.667107 AGATATTTCGATTGAAGTTCCACTTAA 57.333 29.630 0.00 0.00 38.80 1.85
326 327 6.908825 TTTCGATTGAAGTTCCACTTAATGG 58.091 36.000 0.00 0.00 38.80 3.16
327 328 6.072175 TTTCGATTGAAGTTCCACTTAATGGG 60.072 38.462 0.00 0.00 41.39 4.00
328 329 8.921789 TTTCGATTGAAGTTCCACTTAATGGGG 61.922 40.741 0.00 0.00 41.39 4.96
337 338 4.981806 CCACTTAATGGGGTAACATGTG 57.018 45.455 0.00 0.00 45.95 3.21
338 339 4.340617 CCACTTAATGGGGTAACATGTGT 58.659 43.478 0.00 0.00 45.95 3.72
339 340 4.398044 CCACTTAATGGGGTAACATGTGTC 59.602 45.833 0.00 0.00 45.95 3.67
340 341 5.007034 CACTTAATGGGGTAACATGTGTCA 58.993 41.667 0.00 0.00 39.74 3.58
341 342 5.007682 ACTTAATGGGGTAACATGTGTCAC 58.992 41.667 0.00 0.00 39.74 3.67
342 343 3.517296 AATGGGGTAACATGTGTCACA 57.483 42.857 8.40 8.40 39.74 3.58
343 344 3.517296 ATGGGGTAACATGTGTCACAA 57.483 42.857 10.28 0.00 39.74 3.33
344 345 3.298686 TGGGGTAACATGTGTCACAAA 57.701 42.857 10.28 0.00 39.74 2.83
345 346 3.838565 TGGGGTAACATGTGTCACAAAT 58.161 40.909 10.28 1.91 39.74 2.32
346 347 3.571828 TGGGGTAACATGTGTCACAAATG 59.428 43.478 10.28 6.39 35.38 2.32
347 348 3.572255 GGGGTAACATGTGTCACAAATGT 59.428 43.478 7.89 7.89 43.33 2.71
348 349 4.762765 GGGGTAACATGTGTCACAAATGTA 59.237 41.667 14.30 0.60 40.94 2.29
349 350 5.335348 GGGGTAACATGTGTCACAAATGTAC 60.335 44.000 14.30 11.76 40.94 2.90
350 351 5.239744 GGGTAACATGTGTCACAAATGTACA 59.760 40.000 14.30 2.77 40.94 2.90
351 352 6.238786 GGGTAACATGTGTCACAAATGTACAA 60.239 38.462 14.30 0.62 40.94 2.41
352 353 6.635239 GGTAACATGTGTCACAAATGTACAAC 59.365 38.462 14.30 12.09 40.94 3.32
353 354 6.449635 AACATGTGTCACAAATGTACAACT 57.550 33.333 14.30 0.00 40.94 3.16
354 355 7.561021 AACATGTGTCACAAATGTACAACTA 57.439 32.000 14.30 0.00 40.94 2.24
355 356 6.954944 ACATGTGTCACAAATGTACAACTAC 58.045 36.000 12.28 0.00 40.14 2.73
356 357 6.540551 ACATGTGTCACAAATGTACAACTACA 59.459 34.615 12.28 0.90 40.14 2.74
357 358 6.597262 TGTGTCACAAATGTACAACTACAG 57.403 37.500 2.31 0.00 36.28 2.74
358 359 5.525745 TGTGTCACAAATGTACAACTACAGG 59.474 40.000 2.31 0.00 36.28 4.00
359 360 5.049680 GTGTCACAAATGTACAACTACAGGG 60.050 44.000 0.00 0.00 36.28 4.45
360 361 5.061179 GTCACAAATGTACAACTACAGGGT 58.939 41.667 0.00 0.00 36.28 4.34
361 362 6.183360 TGTCACAAATGTACAACTACAGGGTA 60.183 38.462 0.00 0.00 36.28 3.69
362 363 6.707161 GTCACAAATGTACAACTACAGGGTAA 59.293 38.462 0.00 0.00 36.28 2.85
363 364 7.227116 GTCACAAATGTACAACTACAGGGTAAA 59.773 37.037 0.00 0.00 36.28 2.01
364 365 7.774157 TCACAAATGTACAACTACAGGGTAAAA 59.226 33.333 0.00 0.00 36.28 1.52
365 366 7.858879 CACAAATGTACAACTACAGGGTAAAAC 59.141 37.037 0.00 0.00 36.28 2.43
366 367 7.556996 ACAAATGTACAACTACAGGGTAAAACA 59.443 33.333 0.00 0.00 36.28 2.83
367 368 8.573035 CAAATGTACAACTACAGGGTAAAACAT 58.427 33.333 0.00 0.00 36.28 2.71
368 369 7.681939 ATGTACAACTACAGGGTAAAACATG 57.318 36.000 0.00 0.00 36.28 3.21
369 370 6.828788 TGTACAACTACAGGGTAAAACATGA 58.171 36.000 0.00 0.00 0.00 3.07
370 371 7.281098 TGTACAACTACAGGGTAAAACATGAA 58.719 34.615 0.00 0.00 0.00 2.57
371 372 7.774157 TGTACAACTACAGGGTAAAACATGAAA 59.226 33.333 0.00 0.00 0.00 2.69
372 373 7.833285 ACAACTACAGGGTAAAACATGAAAT 57.167 32.000 0.00 0.00 0.00 2.17
373 374 8.245195 ACAACTACAGGGTAAAACATGAAATT 57.755 30.769 0.00 0.00 0.00 1.82
374 375 8.357402 ACAACTACAGGGTAAAACATGAAATTC 58.643 33.333 0.00 0.00 0.00 2.17
375 376 8.356657 CAACTACAGGGTAAAACATGAAATTCA 58.643 33.333 0.00 0.00 0.00 2.57
376 377 7.882179 ACTACAGGGTAAAACATGAAATTCAC 58.118 34.615 0.00 0.00 0.00 3.18
377 378 6.976934 ACAGGGTAAAACATGAAATTCACT 57.023 33.333 0.00 0.00 0.00 3.41
378 379 6.981722 ACAGGGTAAAACATGAAATTCACTC 58.018 36.000 0.00 0.00 0.00 3.51
379 380 6.777580 ACAGGGTAAAACATGAAATTCACTCT 59.222 34.615 0.00 0.00 0.00 3.24
380 381 7.287696 ACAGGGTAAAACATGAAATTCACTCTT 59.712 33.333 0.00 0.00 0.00 2.85
381 382 8.792633 CAGGGTAAAACATGAAATTCACTCTTA 58.207 33.333 0.00 0.00 0.00 2.10
382 383 9.362151 AGGGTAAAACATGAAATTCACTCTTAA 57.638 29.630 0.00 0.00 0.00 1.85
383 384 9.974980 GGGTAAAACATGAAATTCACTCTTAAA 57.025 29.630 0.00 0.00 0.00 1.52
398 399 9.950680 TTCACTCTTAAAAGAAACAAATAGCTG 57.049 29.630 0.00 0.00 34.03 4.24
399 400 9.337396 TCACTCTTAAAAGAAACAAATAGCTGA 57.663 29.630 0.00 0.00 34.03 4.26
400 401 9.387123 CACTCTTAAAAGAAACAAATAGCTGAC 57.613 33.333 0.00 0.00 34.03 3.51
401 402 9.120538 ACTCTTAAAAGAAACAAATAGCTGACA 57.879 29.630 0.00 0.00 34.03 3.58
402 403 9.387123 CTCTTAAAAGAAACAAATAGCTGACAC 57.613 33.333 0.00 0.00 34.03 3.67
403 404 8.067784 TCTTAAAAGAAACAAATAGCTGACACG 58.932 33.333 0.00 0.00 30.73 4.49
404 405 6.371809 AAAAGAAACAAATAGCTGACACGA 57.628 33.333 0.00 0.00 0.00 4.35
405 406 6.371809 AAAGAAACAAATAGCTGACACGAA 57.628 33.333 0.00 0.00 0.00 3.85
406 407 5.597813 AGAAACAAATAGCTGACACGAAG 57.402 39.130 0.00 0.00 0.00 3.79
407 408 5.297547 AGAAACAAATAGCTGACACGAAGA 58.702 37.500 0.00 0.00 0.00 2.87
408 409 5.758296 AGAAACAAATAGCTGACACGAAGAA 59.242 36.000 0.00 0.00 0.00 2.52
409 410 5.597813 AACAAATAGCTGACACGAAGAAG 57.402 39.130 0.00 0.00 0.00 2.85
410 411 4.632153 ACAAATAGCTGACACGAAGAAGT 58.368 39.130 0.00 0.00 0.00 3.01
411 412 4.449068 ACAAATAGCTGACACGAAGAAGTG 59.551 41.667 0.00 0.00 46.83 3.16
412 413 2.065993 TAGCTGACACGAAGAAGTGC 57.934 50.000 0.00 0.00 45.45 4.40
413 414 0.104855 AGCTGACACGAAGAAGTGCA 59.895 50.000 0.00 0.00 45.45 4.57
414 415 0.937304 GCTGACACGAAGAAGTGCAA 59.063 50.000 0.00 0.00 45.45 4.08
415 416 1.330521 GCTGACACGAAGAAGTGCAAA 59.669 47.619 0.00 0.00 45.45 3.68
416 417 2.031682 GCTGACACGAAGAAGTGCAAAT 60.032 45.455 0.00 0.00 45.45 2.32
417 418 3.548818 GCTGACACGAAGAAGTGCAAATT 60.549 43.478 0.00 0.00 45.45 1.82
418 419 3.951306 TGACACGAAGAAGTGCAAATTG 58.049 40.909 0.00 0.00 45.45 2.32
419 420 3.376859 TGACACGAAGAAGTGCAAATTGT 59.623 39.130 0.00 0.00 45.45 2.71
420 421 3.952535 ACACGAAGAAGTGCAAATTGTC 58.047 40.909 0.00 0.00 45.45 3.18
421 422 3.627577 ACACGAAGAAGTGCAAATTGTCT 59.372 39.130 0.00 0.00 45.45 3.41
422 423 3.970610 CACGAAGAAGTGCAAATTGTCTG 59.029 43.478 0.00 0.00 35.17 3.51
423 424 3.876914 ACGAAGAAGTGCAAATTGTCTGA 59.123 39.130 0.00 0.00 0.00 3.27
424 425 4.335315 ACGAAGAAGTGCAAATTGTCTGAA 59.665 37.500 0.00 0.00 0.00 3.02
425 426 5.163663 ACGAAGAAGTGCAAATTGTCTGAAA 60.164 36.000 0.00 0.00 0.00 2.69
426 427 5.916883 CGAAGAAGTGCAAATTGTCTGAAAT 59.083 36.000 0.00 0.00 0.00 2.17
427 428 6.418819 CGAAGAAGTGCAAATTGTCTGAAATT 59.581 34.615 0.00 0.00 0.00 1.82
428 429 7.043192 CGAAGAAGTGCAAATTGTCTGAAATTT 60.043 33.333 0.00 0.00 39.71 1.82
444 445 9.159470 GTCTGAAATTTGAAAAGAAGTTACTCG 57.841 33.333 0.00 0.00 0.00 4.18
445 446 8.889717 TCTGAAATTTGAAAAGAAGTTACTCGT 58.110 29.630 0.00 0.00 0.00 4.18
446 447 8.835467 TGAAATTTGAAAAGAAGTTACTCGTG 57.165 30.769 0.00 0.00 0.00 4.35
447 448 8.455682 TGAAATTTGAAAAGAAGTTACTCGTGT 58.544 29.630 0.00 0.00 0.00 4.49
448 449 8.836959 AAATTTGAAAAGAAGTTACTCGTGTC 57.163 30.769 0.00 0.00 0.00 3.67
449 450 6.971527 TTTGAAAAGAAGTTACTCGTGTCA 57.028 33.333 0.00 0.00 0.00 3.58
450 451 6.583912 TTGAAAAGAAGTTACTCGTGTCAG 57.416 37.500 0.00 0.00 0.00 3.51
451 452 4.506654 TGAAAAGAAGTTACTCGTGTCAGC 59.493 41.667 0.00 0.00 0.00 4.26
452 453 4.323553 AAAGAAGTTACTCGTGTCAGCT 57.676 40.909 0.00 0.00 0.00 4.24
453 454 5.449107 AAAGAAGTTACTCGTGTCAGCTA 57.551 39.130 0.00 0.00 0.00 3.32
454 455 5.646577 AAGAAGTTACTCGTGTCAGCTAT 57.353 39.130 0.00 0.00 0.00 2.97
455 456 5.238006 AGAAGTTACTCGTGTCAGCTATC 57.762 43.478 0.00 0.00 0.00 2.08
456 457 3.677190 AGTTACTCGTGTCAGCTATCG 57.323 47.619 0.00 0.00 0.00 2.92
457 458 3.268330 AGTTACTCGTGTCAGCTATCGA 58.732 45.455 0.00 0.00 0.00 3.59
462 463 4.475763 CTCGTGTCAGCTATCGAGTATT 57.524 45.455 15.73 0.00 42.83 1.89
463 464 4.459606 CTCGTGTCAGCTATCGAGTATTC 58.540 47.826 15.73 0.00 42.83 1.75
464 465 3.250280 TCGTGTCAGCTATCGAGTATTCC 59.750 47.826 0.00 0.00 0.00 3.01
465 466 3.609644 CGTGTCAGCTATCGAGTATTCCC 60.610 52.174 0.00 0.00 0.00 3.97
466 467 3.570550 GTGTCAGCTATCGAGTATTCCCT 59.429 47.826 0.00 0.00 0.00 4.20
467 468 3.821600 TGTCAGCTATCGAGTATTCCCTC 59.178 47.826 0.00 0.00 0.00 4.30
468 469 3.191791 GTCAGCTATCGAGTATTCCCTCC 59.808 52.174 0.00 0.00 0.00 4.30
469 470 2.162608 CAGCTATCGAGTATTCCCTCCG 59.837 54.545 0.00 0.00 0.00 4.63
470 471 2.161030 GCTATCGAGTATTCCCTCCGT 58.839 52.381 0.00 0.00 0.00 4.69
471 472 2.162008 GCTATCGAGTATTCCCTCCGTC 59.838 54.545 0.00 0.00 0.00 4.79
472 473 1.618487 ATCGAGTATTCCCTCCGTCC 58.382 55.000 0.00 0.00 0.00 4.79
473 474 0.256752 TCGAGTATTCCCTCCGTCCA 59.743 55.000 0.00 0.00 0.00 4.02
474 475 0.669077 CGAGTATTCCCTCCGTCCAG 59.331 60.000 0.00 0.00 0.00 3.86
475 476 1.749635 CGAGTATTCCCTCCGTCCAGA 60.750 57.143 0.00 0.00 0.00 3.86
476 477 2.385803 GAGTATTCCCTCCGTCCAGAA 58.614 52.381 0.00 0.00 0.00 3.02
477 478 2.764572 GAGTATTCCCTCCGTCCAGAAA 59.235 50.000 0.00 0.00 0.00 2.52
478 479 3.385115 AGTATTCCCTCCGTCCAGAAAT 58.615 45.455 0.00 0.00 0.00 2.17
479 480 4.553678 AGTATTCCCTCCGTCCAGAAATA 58.446 43.478 0.00 0.00 0.00 1.40
480 481 3.840124 ATTCCCTCCGTCCAGAAATAC 57.160 47.619 0.00 0.00 0.00 1.89
481 482 2.544844 TCCCTCCGTCCAGAAATACT 57.455 50.000 0.00 0.00 0.00 2.12
482 483 2.829023 TCCCTCCGTCCAGAAATACTT 58.171 47.619 0.00 0.00 0.00 2.24
483 484 2.500098 TCCCTCCGTCCAGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
484 485 2.236395 CCCTCCGTCCAGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
485 486 3.522553 CCTCCGTCCAGAAATACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
486 487 3.179830 CTCCGTCCAGAAATACTTGTCG 58.820 50.000 0.00 0.00 0.00 4.35
487 488 2.094390 TCCGTCCAGAAATACTTGTCGG 60.094 50.000 0.00 0.00 41.47 4.79
488 489 2.094390 CCGTCCAGAAATACTTGTCGGA 60.094 50.000 0.00 0.00 42.19 4.55
489 490 3.581755 CGTCCAGAAATACTTGTCGGAA 58.418 45.455 0.00 0.00 0.00 4.30
490 491 3.991773 CGTCCAGAAATACTTGTCGGAAA 59.008 43.478 0.00 0.00 0.00 3.13
491 492 4.449743 CGTCCAGAAATACTTGTCGGAAAA 59.550 41.667 0.00 0.00 0.00 2.29
492 493 5.049954 CGTCCAGAAATACTTGTCGGAAAAA 60.050 40.000 0.00 0.00 0.00 1.94
493 494 6.348213 CGTCCAGAAATACTTGTCGGAAAAAT 60.348 38.462 0.00 0.00 0.00 1.82
494 495 6.801862 GTCCAGAAATACTTGTCGGAAAAATG 59.198 38.462 0.00 0.00 0.00 2.32
495 496 5.572896 CCAGAAATACTTGTCGGAAAAATGC 59.427 40.000 0.00 0.00 0.00 3.56
496 497 6.148948 CAGAAATACTTGTCGGAAAAATGCA 58.851 36.000 0.00 0.00 0.00 3.96
497 498 6.808212 CAGAAATACTTGTCGGAAAAATGCAT 59.192 34.615 0.00 0.00 0.00 3.96
498 499 7.967854 CAGAAATACTTGTCGGAAAAATGCATA 59.032 33.333 0.00 0.00 0.00 3.14
499 500 8.519526 AGAAATACTTGTCGGAAAAATGCATAA 58.480 29.630 0.00 0.00 0.00 1.90
500 501 9.134734 GAAATACTTGTCGGAAAAATGCATAAA 57.865 29.630 0.00 0.00 0.00 1.40
501 502 9.482627 AAATACTTGTCGGAAAAATGCATAAAA 57.517 25.926 0.00 0.00 0.00 1.52
502 503 9.482627 AATACTTGTCGGAAAAATGCATAAAAA 57.517 25.926 0.00 0.00 0.00 1.94
503 504 7.172654 ACTTGTCGGAAAAATGCATAAAAAC 57.827 32.000 0.00 0.00 0.00 2.43
504 505 6.758886 ACTTGTCGGAAAAATGCATAAAAACA 59.241 30.769 0.00 0.00 0.00 2.83
505 506 6.761731 TGTCGGAAAAATGCATAAAAACAG 57.238 33.333 0.00 0.00 0.00 3.16
506 507 6.507900 TGTCGGAAAAATGCATAAAAACAGA 58.492 32.000 0.00 0.00 0.00 3.41
507 508 7.151308 TGTCGGAAAAATGCATAAAAACAGAT 58.849 30.769 0.00 0.00 0.00 2.90
508 509 7.116090 TGTCGGAAAAATGCATAAAAACAGATG 59.884 33.333 0.00 0.00 0.00 2.90
509 510 7.328249 GTCGGAAAAATGCATAAAAACAGATGA 59.672 33.333 0.00 0.00 0.00 2.92
510 511 7.869937 TCGGAAAAATGCATAAAAACAGATGAA 59.130 29.630 0.00 0.00 0.00 2.57
511 512 8.658609 CGGAAAAATGCATAAAAACAGATGAAT 58.341 29.630 0.00 0.00 0.00 2.57
512 513 9.977762 GGAAAAATGCATAAAAACAGATGAATC 57.022 29.630 0.00 0.00 0.00 2.52
549 550 6.775594 TGTATAGATACATCCATTCCTCCG 57.224 41.667 0.00 0.00 38.28 4.63
550 551 6.490492 TGTATAGATACATCCATTCCTCCGA 58.510 40.000 0.00 0.00 38.28 4.55
551 552 5.923733 ATAGATACATCCATTCCTCCGAC 57.076 43.478 0.00 0.00 0.00 4.79
552 553 3.576861 AGATACATCCATTCCTCCGACA 58.423 45.455 0.00 0.00 0.00 4.35
553 554 3.967326 AGATACATCCATTCCTCCGACAA 59.033 43.478 0.00 0.00 0.00 3.18
554 555 2.698855 ACATCCATTCCTCCGACAAG 57.301 50.000 0.00 0.00 0.00 3.16
555 556 1.909302 ACATCCATTCCTCCGACAAGT 59.091 47.619 0.00 0.00 0.00 3.16
556 557 3.104512 ACATCCATTCCTCCGACAAGTA 58.895 45.455 0.00 0.00 0.00 2.24
557 558 3.711704 ACATCCATTCCTCCGACAAGTAT 59.288 43.478 0.00 0.00 0.00 2.12
558 559 4.164221 ACATCCATTCCTCCGACAAGTATT 59.836 41.667 0.00 0.00 0.00 1.89
559 560 4.837093 TCCATTCCTCCGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
560 561 4.766375 TCCATTCCTCCGACAAGTATTTC 58.234 43.478 0.00 0.00 0.00 2.17
561 562 3.877508 CCATTCCTCCGACAAGTATTTCC 59.122 47.826 0.00 0.00 0.00 3.13
562 563 2.953466 TCCTCCGACAAGTATTTCCG 57.047 50.000 0.00 0.00 0.00 4.30
563 564 1.479323 TCCTCCGACAAGTATTTCCGG 59.521 52.381 0.00 0.00 41.36 5.14
564 565 1.479323 CCTCCGACAAGTATTTCCGGA 59.521 52.381 0.00 0.00 45.74 5.14
565 566 2.537401 CTCCGACAAGTATTTCCGGAC 58.463 52.381 1.83 0.00 43.47 4.79
566 567 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
567 568 1.135315 CCGACAAGTATTTCCGGACGA 60.135 52.381 1.83 0.00 42.49 4.20
568 569 2.598589 CGACAAGTATTTCCGGACGAA 58.401 47.619 1.83 0.00 0.00 3.85
569 570 2.597305 CGACAAGTATTTCCGGACGAAG 59.403 50.000 1.83 0.00 0.00 3.79
570 571 2.928116 GACAAGTATTTCCGGACGAAGG 59.072 50.000 1.83 0.00 0.00 3.46
571 572 2.277084 CAAGTATTTCCGGACGAAGGG 58.723 52.381 1.83 0.00 0.00 3.95
572 573 1.856629 AGTATTTCCGGACGAAGGGA 58.143 50.000 1.83 0.00 0.00 4.20
573 574 1.755380 AGTATTTCCGGACGAAGGGAG 59.245 52.381 1.83 0.00 33.01 4.30
574 575 1.479730 GTATTTCCGGACGAAGGGAGT 59.520 52.381 1.83 0.00 33.01 3.85
575 576 1.856629 ATTTCCGGACGAAGGGAGTA 58.143 50.000 1.83 0.00 33.01 2.59
576 577 0.890683 TTTCCGGACGAAGGGAGTAC 59.109 55.000 1.83 0.00 33.01 2.73
577 578 0.038744 TTCCGGACGAAGGGAGTACT 59.961 55.000 1.83 0.00 33.01 2.73
578 579 0.911769 TCCGGACGAAGGGAGTACTA 59.088 55.000 0.00 0.00 0.00 1.82
579 580 1.492176 TCCGGACGAAGGGAGTACTAT 59.508 52.381 0.00 0.00 0.00 2.12
580 581 2.705658 TCCGGACGAAGGGAGTACTATA 59.294 50.000 0.00 0.00 0.00 1.31
581 582 2.810852 CCGGACGAAGGGAGTACTATAC 59.189 54.545 0.00 0.00 0.00 1.47
582 583 3.470709 CGGACGAAGGGAGTACTATACA 58.529 50.000 0.00 0.00 0.00 2.29
583 584 4.070716 CGGACGAAGGGAGTACTATACAT 58.929 47.826 0.00 0.00 0.00 2.29
584 585 4.083431 CGGACGAAGGGAGTACTATACATG 60.083 50.000 0.00 0.00 0.00 3.21
585 586 5.068636 GGACGAAGGGAGTACTATACATGA 58.931 45.833 0.00 0.00 0.00 3.07
586 587 5.533903 GGACGAAGGGAGTACTATACATGAA 59.466 44.000 0.00 0.00 0.00 2.57
587 588 6.208994 GGACGAAGGGAGTACTATACATGAAT 59.791 42.308 0.00 0.00 0.00 2.57
588 589 7.255871 GGACGAAGGGAGTACTATACATGAATT 60.256 40.741 0.00 0.00 0.00 2.17
589 590 8.019656 ACGAAGGGAGTACTATACATGAATTT 57.980 34.615 0.00 0.00 0.00 1.82
590 591 8.142551 ACGAAGGGAGTACTATACATGAATTTC 58.857 37.037 0.00 0.00 0.00 2.17
591 592 8.141909 CGAAGGGAGTACTATACATGAATTTCA 58.858 37.037 0.00 0.75 0.00 2.69
595 596 9.654663 GGGAGTACTATACATGAATTTCATACC 57.345 37.037 11.44 0.00 34.28 2.73
627 628 4.371624 TTGATCCCTGCATTAATCGGAT 57.628 40.909 0.00 3.61 36.02 4.18
653 654 0.598680 ACACTCTCGCACAGCACTTC 60.599 55.000 0.00 0.00 0.00 3.01
676 677 2.224185 TGTGTTGTGAAGTGCTACCGAT 60.224 45.455 0.00 0.00 0.00 4.18
791 792 1.944032 AGTGAAGGTAAACGTGCGTT 58.056 45.000 3.97 3.97 40.45 4.84
794 795 2.539274 GTGAAGGTAAACGTGCGTTACA 59.461 45.455 10.45 0.00 37.35 2.41
877 881 3.499737 CCGCCAAGTCGTGCCATC 61.500 66.667 0.00 0.00 0.00 3.51
878 882 3.853330 CGCCAAGTCGTGCCATCG 61.853 66.667 0.00 0.00 0.00 3.84
900 904 2.775418 TCCACCATCACCCTACATGAT 58.225 47.619 0.00 0.00 37.27 2.45
940 944 4.012895 CCTCGTGGTTGCACGCAC 62.013 66.667 0.00 0.00 46.91 5.34
979 983 2.104530 GGGGAACTCGCTAGCGAC 59.895 66.667 34.66 24.40 44.01 5.19
1007 1014 3.503363 GCCGTCTGCCATGTCAGC 61.503 66.667 0.00 0.00 34.19 4.26
1576 1583 1.618343 TGTGCAAGGATGAGTTCGAGA 59.382 47.619 0.00 0.00 0.00 4.04
1659 1666 2.948720 GCTCCGGCTCCACAACTCT 61.949 63.158 0.00 0.00 35.22 3.24
1878 1885 2.956964 GAAGCCGACGCCGATGAG 60.957 66.667 0.00 0.00 38.22 2.90
1903 1910 0.105778 TGACAATGTCAGTCGTGGCA 59.894 50.000 12.63 0.00 44.18 4.92
2056 2064 1.660355 CAGCATGCATGATCAGGCC 59.340 57.895 30.64 13.77 43.97 5.19
2079 2089 8.197439 GGCCAAAATTATGTACAGAGCTAAAAT 58.803 33.333 0.33 0.00 0.00 1.82
2111 2121 5.694231 TCAATTTCATGAATATGCTCCCG 57.306 39.130 9.40 0.00 34.21 5.14
2142 2180 8.849168 TGCATATCATTATTCGGAACAGAAAAT 58.151 29.630 0.00 0.00 33.43 1.82
2173 2211 5.011125 GGAGAAAGTAATCCATCTCCGATGA 59.989 44.000 5.03 0.00 46.04 2.92
2181 2222 3.632333 TCCATCTCCGATGACACTTACT 58.368 45.455 5.46 0.00 0.00 2.24
2193 3330 6.620877 ATGACACTTACTACCCTCAAATCA 57.379 37.500 0.00 0.00 0.00 2.57
2202 3339 3.066291 ACCCTCAAATCACACGCATAA 57.934 42.857 0.00 0.00 0.00 1.90
2236 3373 4.260139 TGTCTGAACGTTGTAAGCCATA 57.740 40.909 5.00 0.00 0.00 2.74
2237 3374 4.827692 TGTCTGAACGTTGTAAGCCATAT 58.172 39.130 5.00 0.00 0.00 1.78
2258 3395 9.436957 CCATATAACTAGGTCATGTATTTGTCC 57.563 37.037 0.00 0.00 0.00 4.02
2301 3438 3.259832 TTTTTCGCAAACCGGAAGC 57.740 47.368 9.46 8.08 35.49 3.86
2419 3562 1.291184 TGCATTGTCTCCGCGTCAAG 61.291 55.000 4.92 0.00 0.00 3.02
2427 3570 2.154798 CTCCGCGTCAAGACCCTTCA 62.155 60.000 4.92 0.00 0.00 3.02
2428 3571 1.738099 CCGCGTCAAGACCCTTCAG 60.738 63.158 4.92 0.00 0.00 3.02
2455 3598 0.824759 CCCTCTCCTTTCCGATCGTT 59.175 55.000 15.09 0.00 0.00 3.85
2515 3658 3.803082 CGCATGGACCCGCACAAG 61.803 66.667 0.00 0.00 0.00 3.16
2578 3721 1.329906 GTCGCTCGGAAGATAACTCGA 59.670 52.381 0.00 0.00 40.84 4.04
2621 3764 4.562143 CCTCAAAAAGAAGGCAAAGGATGG 60.562 45.833 0.00 0.00 0.00 3.51
2626 3769 2.837031 GAAGGCAAAGGATGGGGCGA 62.837 60.000 0.00 0.00 0.00 5.54
2678 3828 2.757077 GGCCAGGGTGTAGTTGCT 59.243 61.111 0.00 0.00 0.00 3.91
2688 3838 1.223763 GTAGTTGCTAGGTGGGGCC 59.776 63.158 0.00 0.00 37.58 5.80
2783 3933 2.124819 CTGAGCAGCTTGGGCGAT 60.125 61.111 0.00 0.00 44.37 4.58
2807 3958 3.394836 AGTCTCCAGCCTTCGCCC 61.395 66.667 0.00 0.00 34.57 6.13
2837 3988 6.519679 AGTGCAATATTGTGTCAACATCAT 57.480 33.333 16.61 0.00 35.83 2.45
2914 4068 1.332889 ATCTGGCGTGGATCAGCTCA 61.333 55.000 0.00 0.00 0.00 4.26
2921 4075 0.901124 GTGGATCAGCTCAGTGTCCT 59.099 55.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.225682 TCTAGATAAATTTCCACTTGATAGGGT 57.774 33.333 0.00 0.00 0.00 4.34
23 24 9.706529 AAAGCTTTCAAAAGGGATATTCTAGAT 57.293 29.630 5.69 0.00 36.53 1.98
24 25 8.960591 CAAAGCTTTCAAAAGGGATATTCTAGA 58.039 33.333 9.23 0.00 36.53 2.43
25 26 8.193438 CCAAAGCTTTCAAAAGGGATATTCTAG 58.807 37.037 9.23 0.00 36.53 2.43
26 27 7.893302 TCCAAAGCTTTCAAAAGGGATATTCTA 59.107 33.333 9.23 0.00 36.53 2.10
27 28 6.725834 TCCAAAGCTTTCAAAAGGGATATTCT 59.274 34.615 9.23 0.00 36.53 2.40
28 29 6.813649 GTCCAAAGCTTTCAAAAGGGATATTC 59.186 38.462 9.23 0.00 36.53 1.75
29 30 6.295859 GGTCCAAAGCTTTCAAAAGGGATATT 60.296 38.462 9.23 0.00 36.53 1.28
30 31 5.187772 GGTCCAAAGCTTTCAAAAGGGATAT 59.812 40.000 9.23 0.00 36.53 1.63
31 32 4.526650 GGTCCAAAGCTTTCAAAAGGGATA 59.473 41.667 9.23 0.00 36.53 2.59
32 33 3.324846 GGTCCAAAGCTTTCAAAAGGGAT 59.675 43.478 9.23 0.00 36.53 3.85
33 34 2.698274 GGTCCAAAGCTTTCAAAAGGGA 59.302 45.455 9.23 9.14 36.53 4.20
34 35 2.224281 GGGTCCAAAGCTTTCAAAAGGG 60.224 50.000 9.23 6.69 36.53 3.95
35 36 2.700371 AGGGTCCAAAGCTTTCAAAAGG 59.300 45.455 9.23 7.46 36.53 3.11
36 37 3.550842 CGAGGGTCCAAAGCTTTCAAAAG 60.551 47.826 9.23 0.00 39.03 2.27
37 38 2.360801 CGAGGGTCCAAAGCTTTCAAAA 59.639 45.455 9.23 0.00 0.00 2.44
38 39 1.953686 CGAGGGTCCAAAGCTTTCAAA 59.046 47.619 9.23 0.00 0.00 2.69
39 40 1.133915 ACGAGGGTCCAAAGCTTTCAA 60.134 47.619 9.23 0.00 0.00 2.69
40 41 0.472471 ACGAGGGTCCAAAGCTTTCA 59.528 50.000 9.23 0.00 0.00 2.69
41 42 1.605753 AACGAGGGTCCAAAGCTTTC 58.394 50.000 9.23 0.00 0.00 2.62
42 43 2.067365 AAACGAGGGTCCAAAGCTTT 57.933 45.000 5.69 5.69 0.00 3.51
43 44 1.954382 GAAAACGAGGGTCCAAAGCTT 59.046 47.619 0.00 0.00 0.00 3.74
44 45 1.143073 AGAAAACGAGGGTCCAAAGCT 59.857 47.619 0.00 0.00 0.00 3.74
45 46 1.605753 AGAAAACGAGGGTCCAAAGC 58.394 50.000 0.00 0.00 0.00 3.51
46 47 3.746492 CACTAGAAAACGAGGGTCCAAAG 59.254 47.826 0.00 0.00 0.00 2.77
47 48 3.735591 CACTAGAAAACGAGGGTCCAAA 58.264 45.455 0.00 0.00 0.00 3.28
48 49 2.549349 GCACTAGAAAACGAGGGTCCAA 60.549 50.000 0.00 0.00 0.00 3.53
49 50 1.001633 GCACTAGAAAACGAGGGTCCA 59.998 52.381 0.00 0.00 0.00 4.02
50 51 1.723220 GCACTAGAAAACGAGGGTCC 58.277 55.000 0.00 0.00 0.00 4.46
51 52 1.336609 ACGCACTAGAAAACGAGGGTC 60.337 52.381 0.00 0.00 0.00 4.46
52 53 0.677842 ACGCACTAGAAAACGAGGGT 59.322 50.000 0.00 0.00 0.00 4.34
53 54 1.068474 CACGCACTAGAAAACGAGGG 58.932 55.000 0.00 0.00 0.00 4.30
54 55 1.719780 GACACGCACTAGAAAACGAGG 59.280 52.381 0.00 0.00 0.00 4.63
55 56 1.719780 GGACACGCACTAGAAAACGAG 59.280 52.381 0.00 0.00 0.00 4.18
56 57 1.067364 TGGACACGCACTAGAAAACGA 59.933 47.619 0.00 0.00 0.00 3.85
57 58 1.493772 TGGACACGCACTAGAAAACG 58.506 50.000 0.00 0.00 0.00 3.60
58 59 3.617263 CCTATGGACACGCACTAGAAAAC 59.383 47.826 0.00 0.00 0.00 2.43
59 60 3.857052 CCTATGGACACGCACTAGAAAA 58.143 45.455 0.00 0.00 0.00 2.29
60 61 2.418197 GCCTATGGACACGCACTAGAAA 60.418 50.000 0.00 0.00 0.00 2.52
61 62 1.136305 GCCTATGGACACGCACTAGAA 59.864 52.381 0.00 0.00 0.00 2.10
62 63 0.744874 GCCTATGGACACGCACTAGA 59.255 55.000 0.00 0.00 0.00 2.43
63 64 0.459899 TGCCTATGGACACGCACTAG 59.540 55.000 0.00 0.00 0.00 2.57
64 65 0.899019 TTGCCTATGGACACGCACTA 59.101 50.000 0.00 0.00 0.00 2.74
65 66 0.391661 CTTGCCTATGGACACGCACT 60.392 55.000 0.00 0.00 0.00 4.40
66 67 1.369091 CCTTGCCTATGGACACGCAC 61.369 60.000 0.00 0.00 0.00 5.34
67 68 1.078497 CCTTGCCTATGGACACGCA 60.078 57.895 0.00 0.00 0.00 5.24
68 69 1.078426 ACCTTGCCTATGGACACGC 60.078 57.895 0.00 0.00 0.00 5.34
69 70 1.369091 GCACCTTGCCTATGGACACG 61.369 60.000 0.00 0.00 37.42 4.49
70 71 1.369091 CGCACCTTGCCTATGGACAC 61.369 60.000 0.00 0.00 41.12 3.67
71 72 1.078497 CGCACCTTGCCTATGGACA 60.078 57.895 0.00 0.00 41.12 4.02
72 73 0.811616 CTCGCACCTTGCCTATGGAC 60.812 60.000 0.00 0.00 41.12 4.02
73 74 1.522092 CTCGCACCTTGCCTATGGA 59.478 57.895 0.00 0.00 41.12 3.41
74 75 1.524621 CCTCGCACCTTGCCTATGG 60.525 63.158 0.00 0.00 41.12 2.74
75 76 1.091771 CACCTCGCACCTTGCCTATG 61.092 60.000 0.00 0.00 41.12 2.23
76 77 1.221840 CACCTCGCACCTTGCCTAT 59.778 57.895 0.00 0.00 41.12 2.57
77 78 1.911269 TCACCTCGCACCTTGCCTA 60.911 57.895 0.00 0.00 41.12 3.93
78 79 3.241530 TCACCTCGCACCTTGCCT 61.242 61.111 0.00 0.00 41.12 4.75
79 80 3.050275 GTCACCTCGCACCTTGCC 61.050 66.667 0.00 0.00 41.12 4.52
80 81 3.414700 CGTCACCTCGCACCTTGC 61.415 66.667 0.00 0.00 40.69 4.01
94 95 3.998784 TATTTTTGGTCCCCGGGCGTC 62.999 57.143 17.73 7.14 0.00 5.19
95 96 2.139731 TATTTTTGGTCCCCGGGCGT 62.140 55.000 17.73 0.00 0.00 5.68
96 97 0.753848 ATATTTTTGGTCCCCGGGCG 60.754 55.000 17.73 9.08 0.00 6.13
97 98 0.750249 CATATTTTTGGTCCCCGGGC 59.250 55.000 17.73 1.09 0.00 6.13
98 99 1.754226 CACATATTTTTGGTCCCCGGG 59.246 52.381 15.80 15.80 0.00 5.73
99 100 1.754226 CCACATATTTTTGGTCCCCGG 59.246 52.381 0.00 0.00 0.00 5.73
100 101 2.425668 GTCCACATATTTTTGGTCCCCG 59.574 50.000 0.00 0.00 34.19 5.73
101 102 2.425668 CGTCCACATATTTTTGGTCCCC 59.574 50.000 0.00 0.00 34.19 4.81
102 103 2.159296 GCGTCCACATATTTTTGGTCCC 60.159 50.000 0.00 0.00 34.19 4.46
103 104 2.159296 GGCGTCCACATATTTTTGGTCC 60.159 50.000 0.00 0.00 34.19 4.46
104 105 2.477189 CGGCGTCCACATATTTTTGGTC 60.477 50.000 0.00 0.00 34.19 4.02
105 106 1.470890 CGGCGTCCACATATTTTTGGT 59.529 47.619 0.00 0.00 34.19 3.67
106 107 1.740585 TCGGCGTCCACATATTTTTGG 59.259 47.619 6.85 0.00 0.00 3.28
107 108 2.780993 GTCGGCGTCCACATATTTTTG 58.219 47.619 6.85 0.00 0.00 2.44
108 109 1.395608 CGTCGGCGTCCACATATTTTT 59.604 47.619 6.85 0.00 0.00 1.94
109 110 1.003851 CGTCGGCGTCCACATATTTT 58.996 50.000 6.85 0.00 0.00 1.82
110 111 0.173935 TCGTCGGCGTCCACATATTT 59.826 50.000 10.18 0.00 39.49 1.40
111 112 0.248907 CTCGTCGGCGTCCACATATT 60.249 55.000 10.18 0.00 39.49 1.28
112 113 1.359117 CTCGTCGGCGTCCACATAT 59.641 57.895 10.18 0.00 39.49 1.78
113 114 2.767445 CCTCGTCGGCGTCCACATA 61.767 63.158 10.18 0.00 39.49 2.29
114 115 4.129737 CCTCGTCGGCGTCCACAT 62.130 66.667 10.18 0.00 39.49 3.21
116 117 3.352338 ATTCCTCGTCGGCGTCCAC 62.352 63.158 10.18 0.00 39.49 4.02
117 118 3.066190 ATTCCTCGTCGGCGTCCA 61.066 61.111 10.18 0.00 39.49 4.02
118 119 2.582498 CATTCCTCGTCGGCGTCC 60.582 66.667 10.18 0.00 39.49 4.79
119 120 2.552585 TTCCATTCCTCGTCGGCGTC 62.553 60.000 10.18 0.00 39.49 5.19
120 121 2.642254 TTCCATTCCTCGTCGGCGT 61.642 57.895 10.18 0.00 39.49 5.68
121 122 2.165301 GTTCCATTCCTCGTCGGCG 61.165 63.158 1.15 1.15 39.92 6.46
122 123 0.462047 ATGTTCCATTCCTCGTCGGC 60.462 55.000 0.00 0.00 0.00 5.54
123 124 2.882927 TATGTTCCATTCCTCGTCGG 57.117 50.000 0.00 0.00 0.00 4.79
124 125 5.154932 GTCTATATGTTCCATTCCTCGTCG 58.845 45.833 0.00 0.00 0.00 5.12
125 126 6.085555 TGTCTATATGTTCCATTCCTCGTC 57.914 41.667 0.00 0.00 0.00 4.20
126 127 6.323996 TCTTGTCTATATGTTCCATTCCTCGT 59.676 38.462 0.00 0.00 0.00 4.18
127 128 6.749139 TCTTGTCTATATGTTCCATTCCTCG 58.251 40.000 0.00 0.00 0.00 4.63
128 129 7.957002 TCTCTTGTCTATATGTTCCATTCCTC 58.043 38.462 0.00 0.00 0.00 3.71
129 130 7.921041 TCTCTTGTCTATATGTTCCATTCCT 57.079 36.000 0.00 0.00 0.00 3.36
130 131 8.207545 ACTTCTCTTGTCTATATGTTCCATTCC 58.792 37.037 0.00 0.00 0.00 3.01
131 132 9.255304 GACTTCTCTTGTCTATATGTTCCATTC 57.745 37.037 0.00 0.00 0.00 2.67
132 133 8.986991 AGACTTCTCTTGTCTATATGTTCCATT 58.013 33.333 0.00 0.00 42.28 3.16
133 134 8.546083 AGACTTCTCTTGTCTATATGTTCCAT 57.454 34.615 0.00 0.00 42.28 3.41
134 135 7.615757 TGAGACTTCTCTTGTCTATATGTTCCA 59.384 37.037 7.74 0.00 43.88 3.53
135 136 7.918562 GTGAGACTTCTCTTGTCTATATGTTCC 59.081 40.741 7.74 0.00 43.88 3.62
136 137 8.462811 TGTGAGACTTCTCTTGTCTATATGTTC 58.537 37.037 7.74 0.00 43.88 3.18
137 138 8.247562 GTGTGAGACTTCTCTTGTCTATATGTT 58.752 37.037 7.74 0.00 43.88 2.71
138 139 7.394641 TGTGTGAGACTTCTCTTGTCTATATGT 59.605 37.037 7.74 0.00 43.88 2.29
139 140 7.766283 TGTGTGAGACTTCTCTTGTCTATATG 58.234 38.462 7.74 0.00 43.88 1.78
140 141 7.946381 TGTGTGAGACTTCTCTTGTCTATAT 57.054 36.000 7.74 0.00 43.88 0.86
141 142 7.611855 TCATGTGTGAGACTTCTCTTGTCTATA 59.388 37.037 7.74 0.00 43.88 1.31
142 143 6.435591 TCATGTGTGAGACTTCTCTTGTCTAT 59.564 38.462 7.74 0.00 43.88 1.98
143 144 5.770162 TCATGTGTGAGACTTCTCTTGTCTA 59.230 40.000 7.74 0.00 43.88 2.59
144 145 4.586421 TCATGTGTGAGACTTCTCTTGTCT 59.414 41.667 7.74 0.00 46.17 3.41
145 146 4.876125 TCATGTGTGAGACTTCTCTTGTC 58.124 43.478 7.74 0.00 43.25 3.18
146 147 4.944619 TCATGTGTGAGACTTCTCTTGT 57.055 40.909 7.74 0.00 43.25 3.16
147 148 5.476614 TGATCATGTGTGAGACTTCTCTTG 58.523 41.667 7.74 0.00 43.25 3.02
148 149 5.735285 TGATCATGTGTGAGACTTCTCTT 57.265 39.130 7.74 0.00 43.25 2.85
149 150 5.421374 TGATGATCATGTGTGAGACTTCTCT 59.579 40.000 14.30 0.00 43.25 3.10
150 151 5.658468 TGATGATCATGTGTGAGACTTCTC 58.342 41.667 14.30 0.00 43.15 2.87
151 152 5.672421 TGATGATCATGTGTGAGACTTCT 57.328 39.130 14.30 0.00 37.87 2.85
152 153 6.315642 ACATTGATGATCATGTGTGAGACTTC 59.684 38.462 14.30 0.00 37.87 3.01
153 154 6.178324 ACATTGATGATCATGTGTGAGACTT 58.822 36.000 14.30 0.00 37.87 3.01
154 155 5.742063 ACATTGATGATCATGTGTGAGACT 58.258 37.500 14.30 0.00 37.87 3.24
155 156 6.255950 CAACATTGATGATCATGTGTGAGAC 58.744 40.000 14.30 0.00 37.87 3.36
156 157 5.163693 GCAACATTGATGATCATGTGTGAGA 60.164 40.000 14.30 0.00 37.87 3.27
157 158 5.034797 GCAACATTGATGATCATGTGTGAG 58.965 41.667 14.30 11.74 37.87 3.51
158 159 4.142337 GGCAACATTGATGATCATGTGTGA 60.142 41.667 14.30 0.00 39.04 3.58
159 160 4.109766 GGCAACATTGATGATCATGTGTG 58.890 43.478 14.30 10.63 29.79 3.82
160 161 3.131577 GGGCAACATTGATGATCATGTGT 59.868 43.478 14.30 11.96 39.74 3.72
161 162 3.383505 AGGGCAACATTGATGATCATGTG 59.616 43.478 14.30 11.33 39.74 3.21
162 163 3.635373 GAGGGCAACATTGATGATCATGT 59.365 43.478 14.30 3.02 39.74 3.21
163 164 3.889538 AGAGGGCAACATTGATGATCATG 59.110 43.478 14.30 2.28 39.74 3.07
164 165 3.889538 CAGAGGGCAACATTGATGATCAT 59.110 43.478 8.25 8.25 39.74 2.45
165 166 3.054213 TCAGAGGGCAACATTGATGATCA 60.054 43.478 0.00 0.00 39.74 2.92
166 167 3.548770 TCAGAGGGCAACATTGATGATC 58.451 45.455 0.00 0.00 39.74 2.92
167 168 3.657398 TCAGAGGGCAACATTGATGAT 57.343 42.857 0.00 0.00 39.74 2.45
168 169 3.201487 AGATCAGAGGGCAACATTGATGA 59.799 43.478 0.00 0.00 31.55 2.92
169 170 3.552875 AGATCAGAGGGCAACATTGATG 58.447 45.455 0.00 0.00 31.55 3.07
170 171 3.947612 AGATCAGAGGGCAACATTGAT 57.052 42.857 0.00 0.00 33.17 2.57
171 172 3.726557 AAGATCAGAGGGCAACATTGA 57.273 42.857 0.00 0.00 39.74 2.57
172 173 4.701651 TGTAAAGATCAGAGGGCAACATTG 59.298 41.667 0.00 0.00 39.74 2.82
173 174 4.702131 GTGTAAAGATCAGAGGGCAACATT 59.298 41.667 0.00 0.00 39.74 2.71
174 175 4.263462 TGTGTAAAGATCAGAGGGCAACAT 60.263 41.667 0.00 0.00 39.74 2.71
175 176 3.072330 TGTGTAAAGATCAGAGGGCAACA 59.928 43.478 0.00 0.00 39.74 3.33
176 177 3.674997 TGTGTAAAGATCAGAGGGCAAC 58.325 45.455 0.00 0.00 0.00 4.17
177 178 4.574674 ATGTGTAAAGATCAGAGGGCAA 57.425 40.909 0.00 0.00 0.00 4.52
178 179 5.894298 ATATGTGTAAAGATCAGAGGGCA 57.106 39.130 0.00 0.00 0.00 5.36
179 180 7.573968 AAAATATGTGTAAAGATCAGAGGGC 57.426 36.000 0.00 0.00 0.00 5.19
198 199 9.989869 TTGTCGCGTCAATGATTTATAAAAATA 57.010 25.926 14.68 0.00 35.41 1.40
199 200 8.903570 TTGTCGCGTCAATGATTTATAAAAAT 57.096 26.923 14.68 0.00 38.03 1.82
200 201 8.903570 ATTGTCGCGTCAATGATTTATAAAAA 57.096 26.923 26.59 0.00 36.78 1.94
212 213 0.810648 AATGGCATTGTCGCGTCAAT 59.189 45.000 22.84 22.84 38.38 2.57
213 214 0.167908 GAATGGCATTGTCGCGTCAA 59.832 50.000 19.07 20.34 0.00 3.18
214 215 1.643868 GGAATGGCATTGTCGCGTCA 61.644 55.000 19.07 3.17 0.00 4.35
215 216 1.062525 GGAATGGCATTGTCGCGTC 59.937 57.895 19.07 0.00 0.00 5.19
216 217 0.107897 TAGGAATGGCATTGTCGCGT 60.108 50.000 19.07 7.23 0.00 6.01
217 218 1.195448 GATAGGAATGGCATTGTCGCG 59.805 52.381 19.07 0.00 0.00 5.87
218 219 2.498167 AGATAGGAATGGCATTGTCGC 58.502 47.619 19.07 2.53 0.00 5.19
219 220 5.056480 TGTTAGATAGGAATGGCATTGTCG 58.944 41.667 19.07 0.00 0.00 4.35
220 221 8.621532 TTATGTTAGATAGGAATGGCATTGTC 57.378 34.615 19.07 9.60 0.00 3.18
221 222 8.995027 TTTATGTTAGATAGGAATGGCATTGT 57.005 30.769 19.07 7.18 0.00 2.71
259 260 4.757019 AACACGGTTTTACCCCATTTTT 57.243 36.364 0.00 0.00 33.75 1.94
260 261 5.866159 TTAACACGGTTTTACCCCATTTT 57.134 34.783 0.00 0.00 33.75 1.82
261 262 5.866159 TTTAACACGGTTTTACCCCATTT 57.134 34.783 0.00 0.00 33.75 2.32
262 263 5.363292 ACTTTTAACACGGTTTTACCCCATT 59.637 36.000 0.00 0.00 33.75 3.16
263 264 4.894705 ACTTTTAACACGGTTTTACCCCAT 59.105 37.500 0.00 0.00 33.75 4.00
264 265 4.276642 ACTTTTAACACGGTTTTACCCCA 58.723 39.130 0.00 0.00 33.75 4.96
265 266 4.580167 AGACTTTTAACACGGTTTTACCCC 59.420 41.667 0.00 0.00 33.75 4.95
266 267 5.528690 AGAGACTTTTAACACGGTTTTACCC 59.471 40.000 0.00 0.00 33.75 3.69
267 268 6.609237 AGAGACTTTTAACACGGTTTTACC 57.391 37.500 0.00 0.00 34.05 2.85
268 269 9.986833 TTTTAGAGACTTTTAACACGGTTTTAC 57.013 29.630 0.00 0.00 0.00 2.01
270 271 9.726232 GATTTTAGAGACTTTTAACACGGTTTT 57.274 29.630 0.00 0.00 0.00 2.43
271 272 8.895737 TGATTTTAGAGACTTTTAACACGGTTT 58.104 29.630 0.00 0.00 0.00 3.27
272 273 8.441312 TGATTTTAGAGACTTTTAACACGGTT 57.559 30.769 0.00 0.00 0.00 4.44
273 274 7.929785 TCTGATTTTAGAGACTTTTAACACGGT 59.070 33.333 0.00 0.00 0.00 4.83
274 275 8.306680 TCTGATTTTAGAGACTTTTAACACGG 57.693 34.615 0.00 0.00 0.00 4.94
292 293 9.177608 TGGAACTTCAATCGAAATATCTGATTT 57.822 29.630 0.00 0.00 31.23 2.17
293 294 8.616076 GTGGAACTTCAATCGAAATATCTGATT 58.384 33.333 0.00 0.00 32.69 2.57
294 295 8.147642 GTGGAACTTCAATCGAAATATCTGAT 57.852 34.615 0.00 0.00 0.00 2.90
295 296 7.539712 GTGGAACTTCAATCGAAATATCTGA 57.460 36.000 0.00 0.00 0.00 3.27
317 318 5.007034 TGACACATGTTACCCCATTAAGTG 58.993 41.667 0.00 0.00 0.00 3.16
318 319 5.007682 GTGACACATGTTACCCCATTAAGT 58.992 41.667 0.00 0.00 0.00 2.24
319 320 5.007034 TGTGACACATGTTACCCCATTAAG 58.993 41.667 3.56 0.00 34.10 1.85
320 321 4.986783 TGTGACACATGTTACCCCATTAA 58.013 39.130 3.56 0.00 34.10 1.40
321 322 4.642466 TGTGACACATGTTACCCCATTA 57.358 40.909 3.56 0.00 34.10 1.90
322 323 3.517296 TGTGACACATGTTACCCCATT 57.483 42.857 3.56 0.00 34.10 3.16
323 324 3.517296 TTGTGACACATGTTACCCCAT 57.483 42.857 9.55 0.00 34.10 4.00
324 325 3.298686 TTTGTGACACATGTTACCCCA 57.701 42.857 9.55 0.00 34.10 4.96
325 326 3.572255 ACATTTGTGACACATGTTACCCC 59.428 43.478 11.28 0.00 31.78 4.95
326 327 4.846779 ACATTTGTGACACATGTTACCC 57.153 40.909 11.28 0.00 31.78 3.69
327 328 6.307031 TGTACATTTGTGACACATGTTACC 57.693 37.500 20.75 10.94 36.39 2.85
328 329 7.414436 AGTTGTACATTTGTGACACATGTTAC 58.586 34.615 20.75 15.82 36.39 2.50
329 330 7.561021 AGTTGTACATTTGTGACACATGTTA 57.439 32.000 20.75 9.40 36.39 2.41
330 331 6.449635 AGTTGTACATTTGTGACACATGTT 57.550 33.333 20.75 7.22 36.39 2.71
331 332 6.540551 TGTAGTTGTACATTTGTGACACATGT 59.459 34.615 19.67 19.67 38.19 3.21
332 333 6.953843 TGTAGTTGTACATTTGTGACACATG 58.046 36.000 9.55 9.96 34.02 3.21
333 334 6.204688 CCTGTAGTTGTACATTTGTGACACAT 59.795 38.462 9.55 0.00 38.51 3.21
334 335 5.525745 CCTGTAGTTGTACATTTGTGACACA 59.474 40.000 3.56 3.56 38.51 3.72
335 336 5.049680 CCCTGTAGTTGTACATTTGTGACAC 60.050 44.000 0.00 0.00 38.51 3.67
336 337 5.060506 CCCTGTAGTTGTACATTTGTGACA 58.939 41.667 0.00 0.00 38.51 3.58
337 338 5.061179 ACCCTGTAGTTGTACATTTGTGAC 58.939 41.667 0.00 0.00 38.51 3.67
338 339 5.298989 ACCCTGTAGTTGTACATTTGTGA 57.701 39.130 0.00 0.00 38.51 3.58
339 340 7.499321 TTTACCCTGTAGTTGTACATTTGTG 57.501 36.000 0.00 0.00 38.51 3.33
340 341 7.556996 TGTTTTACCCTGTAGTTGTACATTTGT 59.443 33.333 0.00 0.00 38.51 2.83
341 342 7.932335 TGTTTTACCCTGTAGTTGTACATTTG 58.068 34.615 0.00 0.00 38.51 2.32
342 343 8.573035 CATGTTTTACCCTGTAGTTGTACATTT 58.427 33.333 0.00 0.00 38.51 2.32
343 344 7.940137 TCATGTTTTACCCTGTAGTTGTACATT 59.060 33.333 0.00 0.00 38.51 2.71
344 345 7.455058 TCATGTTTTACCCTGTAGTTGTACAT 58.545 34.615 0.00 0.00 38.51 2.29
345 346 6.828788 TCATGTTTTACCCTGTAGTTGTACA 58.171 36.000 0.00 0.00 36.78 2.90
346 347 7.733402 TTCATGTTTTACCCTGTAGTTGTAC 57.267 36.000 0.00 0.00 0.00 2.90
347 348 8.927675 ATTTCATGTTTTACCCTGTAGTTGTA 57.072 30.769 0.00 0.00 0.00 2.41
348 349 7.833285 ATTTCATGTTTTACCCTGTAGTTGT 57.167 32.000 0.00 0.00 0.00 3.32
349 350 8.356657 TGAATTTCATGTTTTACCCTGTAGTTG 58.643 33.333 0.00 0.00 0.00 3.16
350 351 8.357402 GTGAATTTCATGTTTTACCCTGTAGTT 58.643 33.333 1.78 0.00 0.00 2.24
351 352 7.724061 AGTGAATTTCATGTTTTACCCTGTAGT 59.276 33.333 1.78 0.00 0.00 2.73
352 353 8.110860 AGTGAATTTCATGTTTTACCCTGTAG 57.889 34.615 1.78 0.00 0.00 2.74
353 354 7.942341 AGAGTGAATTTCATGTTTTACCCTGTA 59.058 33.333 1.78 0.00 0.00 2.74
354 355 6.777580 AGAGTGAATTTCATGTTTTACCCTGT 59.222 34.615 1.78 0.00 0.00 4.00
355 356 7.219484 AGAGTGAATTTCATGTTTTACCCTG 57.781 36.000 1.78 0.00 0.00 4.45
356 357 7.839680 AAGAGTGAATTTCATGTTTTACCCT 57.160 32.000 1.78 0.00 0.00 4.34
357 358 9.974980 TTTAAGAGTGAATTTCATGTTTTACCC 57.025 29.630 1.78 0.00 0.00 3.69
372 373 9.950680 CAGCTATTTGTTTCTTTTAAGAGTGAA 57.049 29.630 0.00 0.00 36.22 3.18
373 374 9.337396 TCAGCTATTTGTTTCTTTTAAGAGTGA 57.663 29.630 0.00 0.00 36.22 3.41
374 375 9.387123 GTCAGCTATTTGTTTCTTTTAAGAGTG 57.613 33.333 0.00 0.00 36.22 3.51
375 376 9.120538 TGTCAGCTATTTGTTTCTTTTAAGAGT 57.879 29.630 0.00 0.00 36.22 3.24
376 377 9.387123 GTGTCAGCTATTTGTTTCTTTTAAGAG 57.613 33.333 0.00 0.00 36.22 2.85
377 378 8.067784 CGTGTCAGCTATTTGTTTCTTTTAAGA 58.932 33.333 0.00 0.00 0.00 2.10
378 379 8.067784 TCGTGTCAGCTATTTGTTTCTTTTAAG 58.932 33.333 0.00 0.00 0.00 1.85
379 380 7.921787 TCGTGTCAGCTATTTGTTTCTTTTAA 58.078 30.769 0.00 0.00 0.00 1.52
380 381 7.485418 TCGTGTCAGCTATTTGTTTCTTTTA 57.515 32.000 0.00 0.00 0.00 1.52
381 382 6.371809 TCGTGTCAGCTATTTGTTTCTTTT 57.628 33.333 0.00 0.00 0.00 2.27
382 383 6.260050 TCTTCGTGTCAGCTATTTGTTTCTTT 59.740 34.615 0.00 0.00 0.00 2.52
383 384 5.758296 TCTTCGTGTCAGCTATTTGTTTCTT 59.242 36.000 0.00 0.00 0.00 2.52
384 385 5.297547 TCTTCGTGTCAGCTATTTGTTTCT 58.702 37.500 0.00 0.00 0.00 2.52
385 386 5.591643 TCTTCGTGTCAGCTATTTGTTTC 57.408 39.130 0.00 0.00 0.00 2.78
386 387 5.527582 ACTTCTTCGTGTCAGCTATTTGTTT 59.472 36.000 0.00 0.00 0.00 2.83
387 388 5.050091 CACTTCTTCGTGTCAGCTATTTGTT 60.050 40.000 0.00 0.00 0.00 2.83
388 389 4.449068 CACTTCTTCGTGTCAGCTATTTGT 59.551 41.667 0.00 0.00 0.00 2.83
389 390 4.667668 GCACTTCTTCGTGTCAGCTATTTG 60.668 45.833 0.00 0.00 37.24 2.32
390 391 3.433615 GCACTTCTTCGTGTCAGCTATTT 59.566 43.478 0.00 0.00 37.24 1.40
391 392 2.996621 GCACTTCTTCGTGTCAGCTATT 59.003 45.455 0.00 0.00 37.24 1.73
392 393 2.029020 TGCACTTCTTCGTGTCAGCTAT 60.029 45.455 0.00 0.00 37.24 2.97
393 394 1.339929 TGCACTTCTTCGTGTCAGCTA 59.660 47.619 0.00 0.00 37.24 3.32
394 395 0.104855 TGCACTTCTTCGTGTCAGCT 59.895 50.000 0.00 0.00 37.24 4.24
395 396 0.937304 TTGCACTTCTTCGTGTCAGC 59.063 50.000 0.00 0.00 37.24 4.26
396 397 3.885484 ATTTGCACTTCTTCGTGTCAG 57.115 42.857 0.00 0.00 37.24 3.51
397 398 3.376859 ACAATTTGCACTTCTTCGTGTCA 59.623 39.130 0.00 0.00 37.24 3.58
398 399 3.952535 ACAATTTGCACTTCTTCGTGTC 58.047 40.909 0.00 0.00 37.24 3.67
399 400 3.627577 AGACAATTTGCACTTCTTCGTGT 59.372 39.130 0.00 0.00 37.24 4.49
400 401 3.970610 CAGACAATTTGCACTTCTTCGTG 59.029 43.478 0.00 0.00 37.94 4.35
401 402 3.876914 TCAGACAATTTGCACTTCTTCGT 59.123 39.130 0.00 0.00 0.00 3.85
402 403 4.472691 TCAGACAATTTGCACTTCTTCG 57.527 40.909 0.00 0.00 0.00 3.79
403 404 7.704789 AATTTCAGACAATTTGCACTTCTTC 57.295 32.000 0.00 0.00 0.00 2.87
404 405 7.765360 TCAAATTTCAGACAATTTGCACTTCTT 59.235 29.630 17.43 0.00 46.87 2.52
405 406 7.267128 TCAAATTTCAGACAATTTGCACTTCT 58.733 30.769 17.43 0.00 46.87 2.85
406 407 7.467557 TCAAATTTCAGACAATTTGCACTTC 57.532 32.000 17.43 0.00 46.87 3.01
407 408 7.846644 TTCAAATTTCAGACAATTTGCACTT 57.153 28.000 17.43 0.00 46.87 3.16
408 409 7.846644 TTTCAAATTTCAGACAATTTGCACT 57.153 28.000 17.43 0.00 46.87 4.40
409 410 8.389603 TCTTTTCAAATTTCAGACAATTTGCAC 58.610 29.630 17.43 0.00 46.87 4.57
410 411 8.489990 TCTTTTCAAATTTCAGACAATTTGCA 57.510 26.923 17.43 10.11 46.87 4.08
411 412 9.429600 CTTCTTTTCAAATTTCAGACAATTTGC 57.570 29.630 17.43 0.00 46.87 3.68
418 419 9.159470 CGAGTAACTTCTTTTCAAATTTCAGAC 57.841 33.333 0.00 0.00 0.00 3.51
419 420 8.889717 ACGAGTAACTTCTTTTCAAATTTCAGA 58.110 29.630 0.00 0.00 0.00 3.27
420 421 8.947940 CACGAGTAACTTCTTTTCAAATTTCAG 58.052 33.333 0.00 0.00 0.00 3.02
421 422 8.455682 ACACGAGTAACTTCTTTTCAAATTTCA 58.544 29.630 0.00 0.00 0.00 2.69
422 423 8.836959 ACACGAGTAACTTCTTTTCAAATTTC 57.163 30.769 0.00 0.00 0.00 2.17
423 424 8.455682 TGACACGAGTAACTTCTTTTCAAATTT 58.544 29.630 0.00 0.00 0.00 1.82
424 425 7.981142 TGACACGAGTAACTTCTTTTCAAATT 58.019 30.769 0.00 0.00 0.00 1.82
425 426 7.548196 TGACACGAGTAACTTCTTTTCAAAT 57.452 32.000 0.00 0.00 0.00 2.32
426 427 6.456449 GCTGACACGAGTAACTTCTTTTCAAA 60.456 38.462 0.00 0.00 0.00 2.69
427 428 5.006358 GCTGACACGAGTAACTTCTTTTCAA 59.994 40.000 0.00 0.00 0.00 2.69
428 429 4.506654 GCTGACACGAGTAACTTCTTTTCA 59.493 41.667 0.00 0.00 0.00 2.69
429 430 4.745620 AGCTGACACGAGTAACTTCTTTTC 59.254 41.667 0.00 0.00 0.00 2.29
430 431 4.694339 AGCTGACACGAGTAACTTCTTTT 58.306 39.130 0.00 0.00 0.00 2.27
431 432 4.323553 AGCTGACACGAGTAACTTCTTT 57.676 40.909 0.00 0.00 0.00 2.52
432 433 5.642686 GATAGCTGACACGAGTAACTTCTT 58.357 41.667 0.00 0.00 0.00 2.52
433 434 4.201832 CGATAGCTGACACGAGTAACTTCT 60.202 45.833 0.00 0.00 0.00 2.85
434 435 4.029704 CGATAGCTGACACGAGTAACTTC 58.970 47.826 0.00 0.00 0.00 3.01
435 436 3.688185 TCGATAGCTGACACGAGTAACTT 59.312 43.478 0.00 0.00 0.00 2.66
436 437 3.268330 TCGATAGCTGACACGAGTAACT 58.732 45.455 0.00 0.00 0.00 2.24
437 438 3.609475 CTCGATAGCTGACACGAGTAAC 58.391 50.000 18.33 0.00 44.37 2.50
438 439 3.946308 CTCGATAGCTGACACGAGTAA 57.054 47.619 18.33 0.00 44.37 2.24
442 443 3.250280 GGAATACTCGATAGCTGACACGA 59.750 47.826 0.00 1.29 0.00 4.35
443 444 3.556513 GGAATACTCGATAGCTGACACG 58.443 50.000 0.00 0.00 0.00 4.49
444 445 3.570550 AGGGAATACTCGATAGCTGACAC 59.429 47.826 0.00 0.00 0.00 3.67
445 446 3.821600 GAGGGAATACTCGATAGCTGACA 59.178 47.826 0.00 0.00 0.00 3.58
446 447 3.191791 GGAGGGAATACTCGATAGCTGAC 59.808 52.174 0.00 0.00 38.39 3.51
447 448 3.422796 GGAGGGAATACTCGATAGCTGA 58.577 50.000 0.00 0.00 38.39 4.26
448 449 2.162608 CGGAGGGAATACTCGATAGCTG 59.837 54.545 0.00 0.00 38.39 4.24
449 450 2.224818 ACGGAGGGAATACTCGATAGCT 60.225 50.000 0.00 0.00 38.39 3.32
450 451 2.161030 ACGGAGGGAATACTCGATAGC 58.839 52.381 0.00 0.00 38.39 2.97
451 452 2.748532 GGACGGAGGGAATACTCGATAG 59.251 54.545 0.00 0.00 38.39 2.08
452 453 2.107031 TGGACGGAGGGAATACTCGATA 59.893 50.000 0.00 0.00 38.39 2.92
453 454 1.133575 TGGACGGAGGGAATACTCGAT 60.134 52.381 0.00 0.00 38.39 3.59
454 455 0.256752 TGGACGGAGGGAATACTCGA 59.743 55.000 0.00 0.00 38.39 4.04
455 456 0.669077 CTGGACGGAGGGAATACTCG 59.331 60.000 0.00 0.00 38.39 4.18
456 457 2.068834 TCTGGACGGAGGGAATACTC 57.931 55.000 0.00 0.00 36.76 2.59
457 458 2.544844 TTCTGGACGGAGGGAATACT 57.455 50.000 0.00 0.00 0.00 2.12
458 459 3.840124 ATTTCTGGACGGAGGGAATAC 57.160 47.619 0.00 0.00 0.00 1.89
459 460 4.553678 AGTATTTCTGGACGGAGGGAATA 58.446 43.478 0.00 0.00 0.00 1.75
460 461 3.385115 AGTATTTCTGGACGGAGGGAAT 58.615 45.455 0.00 0.00 0.00 3.01
461 462 2.829023 AGTATTTCTGGACGGAGGGAA 58.171 47.619 0.00 0.00 0.00 3.97
462 463 2.500098 CAAGTATTTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
463 464 2.236395 ACAAGTATTTCTGGACGGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
464 465 3.522553 GACAAGTATTTCTGGACGGAGG 58.477 50.000 0.00 0.00 0.00 4.30
465 466 3.179830 CGACAAGTATTTCTGGACGGAG 58.820 50.000 0.00 0.00 33.12 4.63
466 467 3.226346 CGACAAGTATTTCTGGACGGA 57.774 47.619 0.00 0.00 33.12 4.69
467 468 2.268298 CCGACAAGTATTTCTGGACGG 58.732 52.381 0.00 0.00 45.37 4.79
468 469 3.226346 TCCGACAAGTATTTCTGGACG 57.774 47.619 0.00 0.00 35.64 4.79
469 470 5.934935 TTTTCCGACAAGTATTTCTGGAC 57.065 39.130 0.00 0.00 0.00 4.02
470 471 6.569610 GCATTTTTCCGACAAGTATTTCTGGA 60.570 38.462 0.00 0.00 0.00 3.86
471 472 5.572896 GCATTTTTCCGACAAGTATTTCTGG 59.427 40.000 0.00 0.00 0.00 3.86
472 473 6.148948 TGCATTTTTCCGACAAGTATTTCTG 58.851 36.000 0.00 0.00 0.00 3.02
473 474 6.325919 TGCATTTTTCCGACAAGTATTTCT 57.674 33.333 0.00 0.00 0.00 2.52
474 475 8.682128 TTATGCATTTTTCCGACAAGTATTTC 57.318 30.769 3.54 0.00 0.00 2.17
475 476 9.482627 TTTTATGCATTTTTCCGACAAGTATTT 57.517 25.926 3.54 0.00 0.00 1.40
476 477 9.482627 TTTTTATGCATTTTTCCGACAAGTATT 57.517 25.926 3.54 0.00 0.00 1.89
477 478 8.921670 GTTTTTATGCATTTTTCCGACAAGTAT 58.078 29.630 3.54 0.00 0.00 2.12
478 479 7.921214 TGTTTTTATGCATTTTTCCGACAAGTA 59.079 29.630 3.54 0.00 0.00 2.24
479 480 6.758886 TGTTTTTATGCATTTTTCCGACAAGT 59.241 30.769 3.54 0.00 0.00 3.16
480 481 7.168972 TCTGTTTTTATGCATTTTTCCGACAAG 59.831 33.333 3.54 0.00 0.00 3.16
481 482 6.980978 TCTGTTTTTATGCATTTTTCCGACAA 59.019 30.769 3.54 0.00 0.00 3.18
482 483 6.507900 TCTGTTTTTATGCATTTTTCCGACA 58.492 32.000 3.54 0.94 0.00 4.35
483 484 7.328249 TCATCTGTTTTTATGCATTTTTCCGAC 59.672 33.333 3.54 0.00 0.00 4.79
484 485 7.374272 TCATCTGTTTTTATGCATTTTTCCGA 58.626 30.769 3.54 0.00 0.00 4.55
485 486 7.579589 TCATCTGTTTTTATGCATTTTTCCG 57.420 32.000 3.54 0.00 0.00 4.30
486 487 9.977762 GATTCATCTGTTTTTATGCATTTTTCC 57.022 29.630 3.54 0.00 0.00 3.13
526 527 6.377429 GTCGGAGGAATGGATGTATCTATACA 59.623 42.308 5.33 5.33 46.21 2.29
527 528 6.377429 TGTCGGAGGAATGGATGTATCTATAC 59.623 42.308 0.00 0.00 0.00 1.47
528 529 6.490492 TGTCGGAGGAATGGATGTATCTATA 58.510 40.000 0.00 0.00 0.00 1.31
529 530 5.333581 TGTCGGAGGAATGGATGTATCTAT 58.666 41.667 0.00 0.00 0.00 1.98
530 531 4.736473 TGTCGGAGGAATGGATGTATCTA 58.264 43.478 0.00 0.00 0.00 1.98
531 532 3.576861 TGTCGGAGGAATGGATGTATCT 58.423 45.455 0.00 0.00 0.00 1.98
532 533 4.202264 ACTTGTCGGAGGAATGGATGTATC 60.202 45.833 0.00 0.00 0.00 2.24
533 534 3.711704 ACTTGTCGGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 0.00 2.29
534 535 3.104512 ACTTGTCGGAGGAATGGATGTA 58.895 45.455 0.00 0.00 0.00 2.29
535 536 1.909302 ACTTGTCGGAGGAATGGATGT 59.091 47.619 0.00 0.00 0.00 3.06
536 537 2.698855 ACTTGTCGGAGGAATGGATG 57.301 50.000 0.00 0.00 0.00 3.51
537 538 5.368989 GAAATACTTGTCGGAGGAATGGAT 58.631 41.667 0.00 0.00 0.00 3.41
538 539 4.383770 GGAAATACTTGTCGGAGGAATGGA 60.384 45.833 0.00 0.00 0.00 3.41
539 540 3.877508 GGAAATACTTGTCGGAGGAATGG 59.122 47.826 0.00 0.00 0.00 3.16
540 541 3.555956 CGGAAATACTTGTCGGAGGAATG 59.444 47.826 0.00 0.00 0.00 2.67
541 542 3.431766 CCGGAAATACTTGTCGGAGGAAT 60.432 47.826 0.00 0.00 42.94 3.01
542 543 2.093869 CCGGAAATACTTGTCGGAGGAA 60.094 50.000 0.00 0.00 42.94 3.36
543 544 1.479323 CCGGAAATACTTGTCGGAGGA 59.521 52.381 0.00 0.00 42.94 3.71
544 545 1.479323 TCCGGAAATACTTGTCGGAGG 59.521 52.381 0.00 0.00 43.84 4.30
545 546 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
546 547 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
547 548 1.135315 TCGTCCGGAAATACTTGTCGG 60.135 52.381 5.23 0.00 41.80 4.79
548 549 2.267188 TCGTCCGGAAATACTTGTCG 57.733 50.000 5.23 1.58 0.00 4.35
549 550 2.928116 CCTTCGTCCGGAAATACTTGTC 59.072 50.000 5.23 0.00 33.34 3.18
550 551 2.354403 CCCTTCGTCCGGAAATACTTGT 60.354 50.000 5.23 0.00 33.34 3.16
551 552 2.093869 TCCCTTCGTCCGGAAATACTTG 60.094 50.000 5.23 0.00 33.34 3.16
552 553 2.167900 CTCCCTTCGTCCGGAAATACTT 59.832 50.000 5.23 0.00 33.34 2.24
553 554 1.755380 CTCCCTTCGTCCGGAAATACT 59.245 52.381 5.23 0.00 33.34 2.12
554 555 1.479730 ACTCCCTTCGTCCGGAAATAC 59.520 52.381 5.23 0.00 33.34 1.89
555 556 1.856629 ACTCCCTTCGTCCGGAAATA 58.143 50.000 5.23 0.00 33.34 1.40
556 557 1.479730 GTACTCCCTTCGTCCGGAAAT 59.520 52.381 5.23 0.00 33.34 2.17
557 558 0.890683 GTACTCCCTTCGTCCGGAAA 59.109 55.000 5.23 0.00 33.34 3.13
558 559 0.038744 AGTACTCCCTTCGTCCGGAA 59.961 55.000 5.23 0.00 0.00 4.30
559 560 0.911769 TAGTACTCCCTTCGTCCGGA 59.088 55.000 0.00 0.00 0.00 5.14
560 561 1.978454 ATAGTACTCCCTTCGTCCGG 58.022 55.000 0.00 0.00 0.00 5.14
561 562 3.470709 TGTATAGTACTCCCTTCGTCCG 58.529 50.000 0.00 0.00 0.00 4.79
562 563 5.068636 TCATGTATAGTACTCCCTTCGTCC 58.931 45.833 0.00 0.00 0.00 4.79
563 564 6.630444 TTCATGTATAGTACTCCCTTCGTC 57.370 41.667 0.00 0.00 0.00 4.20
564 565 7.598759 AATTCATGTATAGTACTCCCTTCGT 57.401 36.000 0.00 0.00 0.00 3.85
565 566 8.141909 TGAAATTCATGTATAGTACTCCCTTCG 58.858 37.037 0.00 0.00 0.00 3.79
569 570 9.654663 GGTATGAAATTCATGTATAGTACTCCC 57.345 37.037 17.93 0.00 37.70 4.30
580 581 9.947433 AATTGTTTGATGGTATGAAATTCATGT 57.053 25.926 17.93 2.29 37.70 3.21
583 584 9.993454 TCAAATTGTTTGATGGTATGAAATTCA 57.007 25.926 0.00 0.00 44.21 2.57
611 612 4.136796 TCTTTGATCCGATTAATGCAGGG 58.863 43.478 0.00 0.00 0.00 4.45
627 628 2.473816 CTGTGCGAGAGTGTTCTTTGA 58.526 47.619 0.00 0.00 32.53 2.69
653 654 1.260561 GGTAGCACTTCACAACACACG 59.739 52.381 0.00 0.00 0.00 4.49
663 664 2.484264 AGTTGCAAATCGGTAGCACTTC 59.516 45.455 0.00 0.00 38.11 3.01
791 792 4.622933 GCTTGTGAGGTGGTATGTCATGTA 60.623 45.833 0.00 0.00 0.00 2.29
794 795 2.356125 GGCTTGTGAGGTGGTATGTCAT 60.356 50.000 0.00 0.00 0.00 3.06
877 881 1.119684 TGTAGGGTGATGGTGGATCG 58.880 55.000 0.00 0.00 33.17 3.69
878 882 2.705658 TCATGTAGGGTGATGGTGGATC 59.294 50.000 0.00 0.00 0.00 3.36
900 904 0.687427 TGATGTGATCGAGGCAGGGA 60.687 55.000 0.00 0.00 0.00 4.20
973 977 2.439701 CCGGTGGAGAGGTCGCTA 60.440 66.667 0.00 0.00 0.00 4.26
1215 1222 1.286880 CTCGTACGGGAACAACGGT 59.713 57.895 10.34 0.00 39.20 4.83
1602 1609 2.112087 TGGTAGGCGTGCTTGCAA 59.888 55.556 0.00 0.00 36.28 4.08
1878 1885 1.429463 GACTGACATTGTCACCGGTC 58.571 55.000 15.41 16.34 37.67 4.79
1884 1891 0.105778 TGCCACGACTGACATTGTCA 59.894 50.000 18.08 18.08 40.50 3.58
1886 1893 0.884704 GGTGCCACGACTGACATTGT 60.885 55.000 0.00 0.00 0.00 2.71
2023 2031 1.372004 GCTGCGCATGAAACTTGCA 60.372 52.632 12.24 0.00 40.14 4.08
2024 2032 1.372004 TGCTGCGCATGAAACTTGC 60.372 52.632 12.24 9.06 31.71 4.01
2043 2051 4.406326 ACATAATTTTGGCCTGATCATGCA 59.594 37.500 22.20 7.89 0.00 3.96
2054 2062 9.586435 AATTTTAGCTCTGTACATAATTTTGGC 57.414 29.630 0.00 0.00 0.00 4.52
2111 2121 4.242475 TCCGAATAATGATATGCACCGAC 58.758 43.478 0.00 0.00 0.00 4.79
2142 2180 3.437213 TGGATTACTTTCTCCACTCGGA 58.563 45.455 0.00 0.00 36.63 4.55
2148 2186 4.286707 TCGGAGATGGATTACTTTCTCCA 58.713 43.478 15.84 0.00 45.27 3.86
2173 2211 5.548406 GTGTGATTTGAGGGTAGTAAGTGT 58.452 41.667 0.00 0.00 0.00 3.55
2181 2222 2.779755 ATGCGTGTGATTTGAGGGTA 57.220 45.000 0.00 0.00 0.00 3.69
2193 3330 1.217244 GGGTCCGACTTATGCGTGT 59.783 57.895 0.00 0.00 0.00 4.49
2202 3339 1.348064 TCAGACAATTGGGTCCGACT 58.652 50.000 10.83 0.00 38.59 4.18
2236 3373 5.989777 GCGGACAAATACATGACCTAGTTAT 59.010 40.000 0.00 0.00 33.70 1.89
2237 3374 5.353938 GCGGACAAATACATGACCTAGTTA 58.646 41.667 0.00 0.00 33.70 2.24
2324 3461 1.663379 CCTACGTGGCGGATGTCTGA 61.663 60.000 0.00 0.00 0.00 3.27
2326 3463 2.423898 CCCTACGTGGCGGATGTCT 61.424 63.158 0.00 0.00 0.00 3.41
2419 3562 0.325272 GGGTGGAGAACTGAAGGGTC 59.675 60.000 0.00 0.00 0.00 4.46
2427 3570 2.261729 GAAAGGAGAGGGTGGAGAACT 58.738 52.381 0.00 0.00 0.00 3.01
2428 3571 1.279558 GGAAAGGAGAGGGTGGAGAAC 59.720 57.143 0.00 0.00 0.00 3.01
2529 3672 4.452733 GGTCCTCCACTTCCGCCG 62.453 72.222 0.00 0.00 0.00 6.46
2530 3673 4.097361 GGGTCCTCCACTTCCGCC 62.097 72.222 0.00 0.00 35.00 6.13
2532 3675 1.608717 CTCTGGGTCCTCCACTTCCG 61.609 65.000 0.00 0.00 41.46 4.30
2536 3679 0.252467 CCTTCTCTGGGTCCTCCACT 60.252 60.000 0.00 0.00 41.46 4.00
2578 3721 2.742372 GCGGGCTTGTCATGTCGT 60.742 61.111 0.00 0.00 0.00 4.34
2621 3764 1.081442 CTTCTTTTTGCGGTCGCCC 60.081 57.895 12.94 0.00 41.09 6.13
2626 3769 1.029681 GTCACCCTTCTTTTTGCGGT 58.970 50.000 0.00 0.00 0.00 5.68
2665 3815 1.276622 CCACCTAGCAACTACACCCT 58.723 55.000 0.00 0.00 0.00 4.34
2678 3828 4.424867 ATGTCCCGGCCCCACCTA 62.425 66.667 0.00 0.00 35.61 3.08
2807 3958 5.670485 TGACACAATATTGCACTACCCTAG 58.330 41.667 15.48 0.00 0.00 3.02
2914 4068 2.243810 GGTGAACAGAGAGAGGACACT 58.756 52.381 0.00 0.00 0.00 3.55
2921 4075 2.818432 GACTTACCGGTGAACAGAGAGA 59.182 50.000 19.93 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.