Multiple sequence alignment - TraesCS7B01G071800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G071800 chr7B 100.000 2495 0 0 1 2495 79095012 79097506 0.000000e+00 4608.0
1 TraesCS7B01G071800 chr7B 95.812 191 8 0 144 334 527966361 527966551 2.410000e-80 309.0
2 TraesCS7B01G071800 chr7A 82.973 1756 160 63 656 2328 122347204 122348903 0.000000e+00 1458.0
3 TraesCS7B01G071800 chr7A 95.238 63 1 2 2433 2495 626898189 626898249 5.680000e-17 99.0
4 TraesCS7B01G071800 chr7A 100.000 28 0 0 2419 2446 677655099 677655126 4.000000e-03 52.8
5 TraesCS7B01G071800 chr7D 87.511 1177 82 32 670 1801 117879301 117880457 0.000000e+00 1299.0
6 TraesCS7B01G071800 chr7D 91.053 190 17 0 144 333 588090573 588090384 8.850000e-65 257.0
7 TraesCS7B01G071800 chr7D 92.715 151 11 0 479 629 117878837 117878987 4.180000e-53 219.0
8 TraesCS7B01G071800 chr7D 93.750 128 6 2 333 459 117878298 117878424 9.110000e-45 191.0
9 TraesCS7B01G071800 chr7D 83.453 139 17 5 2 138 117878123 117878257 9.370000e-25 124.0
10 TraesCS7B01G071800 chr3A 95.288 191 9 0 144 334 747736905 747736715 1.120000e-78 303.0
11 TraesCS7B01G071800 chr3A 100.000 28 0 0 2419 2446 196419294 196419267 4.000000e-03 52.8
12 TraesCS7B01G071800 chr2A 94.845 194 10 0 144 337 740231707 740231900 1.120000e-78 303.0
13 TraesCS7B01G071800 chr2A 95.122 41 2 0 2378 2418 16026227 16026267 5.760000e-07 65.8
14 TraesCS7B01G071800 chr1D 94.180 189 11 0 144 332 470808682 470808494 3.140000e-74 289.0
15 TraesCS7B01G071800 chr1D 83.243 185 29 2 152 334 8801277 8801461 4.270000e-38 169.0
16 TraesCS7B01G071800 chr5A 93.717 191 12 0 144 334 174924939 174925129 1.130000e-73 287.0
17 TraesCS7B01G071800 chr5A 96.296 54 2 0 2442 2495 197206757 197206810 3.420000e-14 89.8
18 TraesCS7B01G071800 chr2D 93.717 191 12 0 144 334 547853975 547854165 1.130000e-73 287.0
19 TraesCS7B01G071800 chr1A 92.746 193 14 0 144 336 571987473 571987665 1.890000e-71 279.0
20 TraesCS7B01G071800 chr1A 91.005 189 14 2 148 334 556436264 556436451 4.120000e-63 252.0
21 TraesCS7B01G071800 chr1A 79.245 159 28 1 152 310 510711825 510711672 3.390000e-19 106.0
22 TraesCS7B01G071800 chr1A 98.148 54 1 0 2442 2495 79696176 79696229 7.350000e-16 95.3
23 TraesCS7B01G071800 chr1A 89.394 66 5 2 151 215 13175609 13175545 5.720000e-12 82.4
24 TraesCS7B01G071800 chr1A 97.826 46 1 0 289 334 495592118 495592163 2.060000e-11 80.5
25 TraesCS7B01G071800 chr4A 92.632 190 14 0 144 333 571211412 571211223 8.790000e-70 274.0
26 TraesCS7B01G071800 chr5D 90.206 194 18 1 144 337 412115650 412115842 4.120000e-63 252.0
27 TraesCS7B01G071800 chr5D 89.394 198 20 1 144 341 97837449 97837253 5.330000e-62 248.0
28 TraesCS7B01G071800 chr5D 94.828 58 3 0 2438 2495 478443277 478443220 9.500000e-15 91.6
29 TraesCS7B01G071800 chr5D 91.667 60 5 0 2436 2495 458189515 458189456 1.590000e-12 84.2
30 TraesCS7B01G071800 chr3D 91.713 181 14 1 144 324 85438328 85438149 1.480000e-62 250.0
31 TraesCS7B01G071800 chr3D 87.879 198 17 3 144 334 23142292 23142489 2.500000e-55 226.0
32 TraesCS7B01G071800 chr3D 90.476 168 16 0 151 318 1289950 1290117 3.230000e-54 222.0
33 TraesCS7B01G071800 chr3D 98.148 54 1 0 2442 2495 482487850 482487903 7.350000e-16 95.3
34 TraesCS7B01G071800 chr3D 88.462 52 5 1 2368 2418 463074016 463074067 7.450000e-06 62.1
35 TraesCS7B01G071800 chr1B 100.000 50 0 0 2445 2494 646461140 646461189 2.640000e-15 93.5
36 TraesCS7B01G071800 chr1B 98.077 52 1 0 2443 2494 115956183 115956234 9.500000e-15 91.6
37 TraesCS7B01G071800 chr1B 100.000 28 0 0 2419 2446 677849012 677849039 4.000000e-03 52.8
38 TraesCS7B01G071800 chr6B 96.364 55 2 0 2441 2495 714651166 714651220 9.500000e-15 91.6
39 TraesCS7B01G071800 chr6B 95.349 43 2 0 2376 2418 238166685 238166643 4.450000e-08 69.4
40 TraesCS7B01G071800 chr6B 91.304 46 2 2 2375 2418 353859710 353859755 7.450000e-06 62.1
41 TraesCS7B01G071800 chr4B 97.500 40 0 1 2379 2418 626420436 626420398 1.600000e-07 67.6
42 TraesCS7B01G071800 chr4B 95.122 41 2 0 2378 2418 605569885 605569845 5.760000e-07 65.8
43 TraesCS7B01G071800 chr4B 100.000 28 0 0 2419 2446 598343770 598343743 4.000000e-03 52.8
44 TraesCS7B01G071800 chr4D 95.238 42 1 1 2378 2418 442253156 442253115 5.760000e-07 65.8
45 TraesCS7B01G071800 chr4D 100.000 28 0 0 2419 2446 463349792 463349765 4.000000e-03 52.8
46 TraesCS7B01G071800 chrUn 95.122 41 1 1 2378 2418 476383049 476383088 2.070000e-06 63.9
47 TraesCS7B01G071800 chrUn 100.000 28 0 0 2419 2446 314656134 314656161 4.000000e-03 52.8
48 TraesCS7B01G071800 chrUn 100.000 28 0 0 2419 2446 338758767 338758794 4.000000e-03 52.8
49 TraesCS7B01G071800 chr5B 90.000 50 1 4 2372 2418 361405620 361405572 7.450000e-06 62.1
50 TraesCS7B01G071800 chr6D 100.000 28 0 0 2419 2446 336829887 336829914 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G071800 chr7B 79095012 79097506 2494 False 4608.00 4608 100.00000 1 2495 1 chr7B.!!$F1 2494
1 TraesCS7B01G071800 chr7A 122347204 122348903 1699 False 1458.00 1458 82.97300 656 2328 1 chr7A.!!$F1 1672
2 TraesCS7B01G071800 chr7D 117878123 117880457 2334 False 458.25 1299 89.35725 2 1801 4 chr7D.!!$F1 1799

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
260 263 0.100682 CTAGATCGTGGACCACCGTG 59.899 60.0 19.11 5.36 39.42 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2284 3054 0.03213 CGGGATTCGTGATGACCGAT 59.968 55.0 0.0 0.0 43.69 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 5.197451 ACGTATGCCCATTTAATTGGAAGA 58.803 37.500 16.35 1.24 39.25 2.87
124 127 1.442526 CGAGCACTGCCCATTCCATC 61.443 60.000 0.00 0.00 0.00 3.51
138 141 5.127031 CCCATTCCATCAATTTCTTAACGGT 59.873 40.000 0.00 0.00 0.00 4.83
139 142 6.035843 CCATTCCATCAATTTCTTAACGGTG 58.964 40.000 0.00 0.00 0.00 4.94
140 143 6.350110 CCATTCCATCAATTTCTTAACGGTGT 60.350 38.462 0.00 0.00 0.00 4.16
141 144 5.621197 TCCATCAATTTCTTAACGGTGTG 57.379 39.130 0.00 0.00 0.00 3.82
142 145 5.067273 TCCATCAATTTCTTAACGGTGTGT 58.933 37.500 0.00 0.00 0.00 3.72
144 147 6.039941 TCCATCAATTTCTTAACGGTGTGTTT 59.960 34.615 0.00 0.00 42.09 2.83
145 148 6.362283 CCATCAATTTCTTAACGGTGTGTTTC 59.638 38.462 0.00 0.00 42.09 2.78
147 150 7.033530 TCAATTTCTTAACGGTGTGTTTCAT 57.966 32.000 0.00 0.00 42.09 2.57
148 151 6.915300 TCAATTTCTTAACGGTGTGTTTCATG 59.085 34.615 0.00 0.00 42.09 3.07
149 152 5.821516 TTTCTTAACGGTGTGTTTCATGT 57.178 34.783 0.00 0.00 42.09 3.21
150 153 4.804608 TCTTAACGGTGTGTTTCATGTG 57.195 40.909 0.00 0.00 42.09 3.21
151 154 4.193090 TCTTAACGGTGTGTTTCATGTGT 58.807 39.130 0.00 0.00 42.09 3.72
153 156 3.859411 AACGGTGTGTTTCATGTGTTT 57.141 38.095 0.00 0.00 37.59 2.83
154 157 4.966965 AACGGTGTGTTTCATGTGTTTA 57.033 36.364 0.00 0.00 37.59 2.01
155 158 5.508200 AACGGTGTGTTTCATGTGTTTAT 57.492 34.783 0.00 0.00 37.59 1.40
157 160 5.516090 ACGGTGTGTTTCATGTGTTTATTC 58.484 37.500 0.00 0.00 0.00 1.75
158 161 4.915085 CGGTGTGTTTCATGTGTTTATTCC 59.085 41.667 0.00 0.00 0.00 3.01
159 162 4.915085 GGTGTGTTTCATGTGTTTATTCCG 59.085 41.667 0.00 0.00 0.00 4.30
160 163 4.381566 GTGTGTTTCATGTGTTTATTCCGC 59.618 41.667 0.00 0.00 0.00 5.54
161 164 4.036852 TGTGTTTCATGTGTTTATTCCGCA 59.963 37.500 0.00 0.00 0.00 5.69
162 165 4.616802 GTGTTTCATGTGTTTATTCCGCAG 59.383 41.667 0.00 0.00 0.00 5.18
163 166 4.517075 TGTTTCATGTGTTTATTCCGCAGA 59.483 37.500 0.00 0.00 0.00 4.26
164 167 5.009110 TGTTTCATGTGTTTATTCCGCAGAA 59.991 36.000 0.00 0.00 36.15 3.02
165 168 5.697473 TTCATGTGTTTATTCCGCAGAAA 57.303 34.783 0.00 0.00 35.09 2.52
166 169 5.697473 TCATGTGTTTATTCCGCAGAAAA 57.303 34.783 0.00 0.00 35.09 2.29
167 170 6.266168 TCATGTGTTTATTCCGCAGAAAAT 57.734 33.333 0.00 0.00 35.09 1.82
168 171 6.686630 TCATGTGTTTATTCCGCAGAAAATT 58.313 32.000 0.00 0.00 35.09 1.82
171 174 8.586273 CATGTGTTTATTCCGCAGAAAATTAAG 58.414 33.333 0.00 0.00 35.09 1.85
172 175 6.584563 TGTGTTTATTCCGCAGAAAATTAAGC 59.415 34.615 0.00 0.00 35.09 3.09
193 196 4.768659 CGTGAGCAAAATAGAGTAGCAG 57.231 45.455 0.00 0.00 0.00 4.24
194 197 4.424626 CGTGAGCAAAATAGAGTAGCAGA 58.575 43.478 0.00 0.00 0.00 4.26
195 198 5.046529 CGTGAGCAAAATAGAGTAGCAGAT 58.953 41.667 0.00 0.00 0.00 2.90
196 199 5.174761 CGTGAGCAAAATAGAGTAGCAGATC 59.825 44.000 0.00 0.00 0.00 2.75
197 200 5.174761 GTGAGCAAAATAGAGTAGCAGATCG 59.825 44.000 0.00 0.00 0.00 3.69
198 201 4.626042 AGCAAAATAGAGTAGCAGATCGG 58.374 43.478 0.00 0.00 0.00 4.18
199 202 4.100189 AGCAAAATAGAGTAGCAGATCGGT 59.900 41.667 0.00 0.00 0.00 4.69
200 203 4.811557 GCAAAATAGAGTAGCAGATCGGTT 59.188 41.667 0.00 0.00 0.00 4.44
201 204 5.277058 GCAAAATAGAGTAGCAGATCGGTTG 60.277 44.000 0.00 0.00 0.00 3.77
202 205 5.854010 AAATAGAGTAGCAGATCGGTTGA 57.146 39.130 0.00 0.00 0.00 3.18
203 206 4.839668 ATAGAGTAGCAGATCGGTTGAC 57.160 45.455 0.00 0.00 0.00 3.18
204 207 2.729194 AGAGTAGCAGATCGGTTGACT 58.271 47.619 0.00 0.00 0.00 3.41
205 208 3.093057 AGAGTAGCAGATCGGTTGACTT 58.907 45.455 0.00 0.00 0.00 3.01
206 209 3.511934 AGAGTAGCAGATCGGTTGACTTT 59.488 43.478 0.00 0.00 0.00 2.66
207 210 3.589988 AGTAGCAGATCGGTTGACTTTG 58.410 45.455 0.00 0.00 0.00 2.77
208 211 2.550830 AGCAGATCGGTTGACTTTGT 57.449 45.000 0.00 0.00 0.00 2.83
209 212 3.678056 AGCAGATCGGTTGACTTTGTA 57.322 42.857 0.00 0.00 0.00 2.41
210 213 4.207891 AGCAGATCGGTTGACTTTGTAT 57.792 40.909 0.00 0.00 0.00 2.29
211 214 5.339008 AGCAGATCGGTTGACTTTGTATA 57.661 39.130 0.00 0.00 0.00 1.47
212 215 5.352284 AGCAGATCGGTTGACTTTGTATAG 58.648 41.667 0.00 0.00 0.00 1.31
213 216 5.105310 AGCAGATCGGTTGACTTTGTATAGT 60.105 40.000 0.00 0.00 0.00 2.12
214 217 5.232414 GCAGATCGGTTGACTTTGTATAGTC 59.768 44.000 0.00 0.00 43.86 2.59
215 218 5.455849 CAGATCGGTTGACTTTGTATAGTCG 59.544 44.000 0.00 0.00 46.00 4.18
216 219 4.771590 TCGGTTGACTTTGTATAGTCGT 57.228 40.909 0.00 0.00 46.00 4.34
217 220 5.878332 TCGGTTGACTTTGTATAGTCGTA 57.122 39.130 0.00 0.00 46.00 3.43
218 221 6.441093 TCGGTTGACTTTGTATAGTCGTAT 57.559 37.500 0.00 0.00 46.00 3.06
219 222 6.855836 TCGGTTGACTTTGTATAGTCGTATT 58.144 36.000 0.00 0.00 46.00 1.89
220 223 6.748658 TCGGTTGACTTTGTATAGTCGTATTG 59.251 38.462 0.00 0.00 46.00 1.90
221 224 6.748658 CGGTTGACTTTGTATAGTCGTATTGA 59.251 38.462 0.00 0.00 46.00 2.57
222 225 7.044249 CGGTTGACTTTGTATAGTCGTATTGAG 60.044 40.741 0.00 0.00 46.00 3.02
223 226 7.972277 GGTTGACTTTGTATAGTCGTATTGAGA 59.028 37.037 0.00 0.00 46.00 3.27
224 227 9.350357 GTTGACTTTGTATAGTCGTATTGAGAA 57.650 33.333 0.00 0.00 46.00 2.87
225 228 8.906636 TGACTTTGTATAGTCGTATTGAGAAC 57.093 34.615 0.00 0.00 46.00 3.01
226 229 8.517056 TGACTTTGTATAGTCGTATTGAGAACA 58.483 33.333 0.00 0.00 46.00 3.18
227 230 8.684973 ACTTTGTATAGTCGTATTGAGAACAC 57.315 34.615 0.00 0.00 0.00 3.32
228 231 7.484007 ACTTTGTATAGTCGTATTGAGAACACG 59.516 37.037 0.00 0.00 37.03 4.49
229 232 6.667007 TGTATAGTCGTATTGAGAACACGA 57.333 37.500 0.00 0.00 41.98 4.35
233 236 2.592194 TCGTATTGAGAACACGACTGC 58.408 47.619 0.00 0.00 39.58 4.40
234 237 2.228103 TCGTATTGAGAACACGACTGCT 59.772 45.455 0.00 0.00 39.58 4.24
235 238 2.342651 CGTATTGAGAACACGACTGCTG 59.657 50.000 0.00 0.00 37.89 4.41
236 239 2.533266 ATTGAGAACACGACTGCTGT 57.467 45.000 0.00 0.00 0.00 4.40
237 240 3.660501 ATTGAGAACACGACTGCTGTA 57.339 42.857 0.00 0.00 0.00 2.74
238 241 3.660501 TTGAGAACACGACTGCTGTAT 57.339 42.857 0.00 0.00 0.00 2.29
239 242 2.946564 TGAGAACACGACTGCTGTATG 58.053 47.619 0.00 1.08 0.00 2.39
240 243 2.263077 GAGAACACGACTGCTGTATGG 58.737 52.381 10.87 1.24 0.00 2.74
241 244 0.721718 GAACACGACTGCTGTATGGC 59.278 55.000 10.87 0.00 0.00 4.40
242 245 0.321671 AACACGACTGCTGTATGGCT 59.678 50.000 10.87 0.00 0.00 4.75
243 246 1.182667 ACACGACTGCTGTATGGCTA 58.817 50.000 10.87 0.00 0.00 3.93
244 247 1.135139 ACACGACTGCTGTATGGCTAG 59.865 52.381 10.87 0.00 0.00 3.42
245 248 1.405463 CACGACTGCTGTATGGCTAGA 59.595 52.381 0.00 0.00 0.00 2.43
246 249 2.035193 CACGACTGCTGTATGGCTAGAT 59.965 50.000 0.00 0.00 0.00 1.98
247 250 2.294791 ACGACTGCTGTATGGCTAGATC 59.705 50.000 0.00 0.00 0.00 2.75
248 251 2.666895 CGACTGCTGTATGGCTAGATCG 60.667 54.545 0.00 0.00 0.00 3.69
249 252 2.294791 GACTGCTGTATGGCTAGATCGT 59.705 50.000 0.00 0.00 0.00 3.73
250 253 2.035193 ACTGCTGTATGGCTAGATCGTG 59.965 50.000 0.00 0.00 0.00 4.35
251 254 1.341209 TGCTGTATGGCTAGATCGTGG 59.659 52.381 0.00 0.00 0.00 4.94
252 255 1.613925 GCTGTATGGCTAGATCGTGGA 59.386 52.381 0.00 0.00 0.00 4.02
253 256 2.608261 GCTGTATGGCTAGATCGTGGAC 60.608 54.545 0.00 0.00 0.00 4.02
254 257 1.961394 TGTATGGCTAGATCGTGGACC 59.039 52.381 0.00 0.00 0.00 4.46
255 258 1.961394 GTATGGCTAGATCGTGGACCA 59.039 52.381 0.00 0.00 0.00 4.02
256 259 0.753262 ATGGCTAGATCGTGGACCAC 59.247 55.000 15.13 15.13 0.00 4.16
257 260 1.327690 TGGCTAGATCGTGGACCACC 61.328 60.000 19.11 5.15 0.00 4.61
258 261 1.065928 GCTAGATCGTGGACCACCG 59.934 63.158 19.11 13.66 39.42 4.94
259 262 1.664321 GCTAGATCGTGGACCACCGT 61.664 60.000 19.11 7.57 39.42 4.83
260 263 0.100682 CTAGATCGTGGACCACCGTG 59.899 60.000 19.11 5.36 39.42 4.94
261 264 1.940883 TAGATCGTGGACCACCGTGC 61.941 60.000 19.11 6.22 39.42 5.34
262 265 3.583276 GATCGTGGACCACCGTGCA 62.583 63.158 19.11 0.00 38.11 4.57
263 266 2.852495 GATCGTGGACCACCGTGCAT 62.852 60.000 19.11 3.48 42.80 3.96
264 267 1.609635 ATCGTGGACCACCGTGCATA 61.610 55.000 19.11 0.00 42.80 3.14
265 268 1.809619 CGTGGACCACCGTGCATAG 60.810 63.158 19.11 0.00 42.80 2.23
266 269 1.594833 GTGGACCACCGTGCATAGA 59.405 57.895 14.16 0.00 42.80 1.98
267 270 0.460284 GTGGACCACCGTGCATAGAG 60.460 60.000 14.16 0.00 42.80 2.43
268 271 1.144057 GGACCACCGTGCATAGAGG 59.856 63.158 0.00 0.00 0.00 3.69
269 272 1.327690 GGACCACCGTGCATAGAGGA 61.328 60.000 8.96 0.00 0.00 3.71
270 273 0.535335 GACCACCGTGCATAGAGGAA 59.465 55.000 8.96 0.00 0.00 3.36
271 274 0.249398 ACCACCGTGCATAGAGGAAC 59.751 55.000 8.96 0.00 0.00 3.62
273 276 1.066143 CCACCGTGCATAGAGGAACTT 60.066 52.381 7.35 0.00 41.55 2.66
274 277 2.615493 CCACCGTGCATAGAGGAACTTT 60.615 50.000 7.35 0.00 41.55 2.66
275 278 3.074412 CACCGTGCATAGAGGAACTTTT 58.926 45.455 7.35 0.00 41.55 2.27
276 279 3.074412 ACCGTGCATAGAGGAACTTTTG 58.926 45.455 7.35 0.00 41.55 2.44
277 280 2.159517 CCGTGCATAGAGGAACTTTTGC 60.160 50.000 0.00 0.00 41.55 3.68
278 281 2.159517 CGTGCATAGAGGAACTTTTGCC 60.160 50.000 0.00 0.00 41.55 4.52
279 282 3.084786 GTGCATAGAGGAACTTTTGCCT 58.915 45.455 0.00 0.00 41.55 4.75
284 287 2.457366 GAGGAACTTTTGCCTCTCGA 57.543 50.000 0.00 0.00 45.72 4.04
285 288 2.979240 GAGGAACTTTTGCCTCTCGAT 58.021 47.619 0.00 0.00 45.72 3.59
286 289 3.339141 GAGGAACTTTTGCCTCTCGATT 58.661 45.455 0.00 0.00 45.72 3.34
287 290 3.077359 AGGAACTTTTGCCTCTCGATTG 58.923 45.455 0.00 0.00 27.25 2.67
288 291 2.814336 GGAACTTTTGCCTCTCGATTGT 59.186 45.455 0.00 0.00 0.00 2.71
289 292 4.000988 GGAACTTTTGCCTCTCGATTGTA 58.999 43.478 0.00 0.00 0.00 2.41
290 293 4.454504 GGAACTTTTGCCTCTCGATTGTAA 59.545 41.667 0.00 0.00 0.00 2.41
291 294 5.358298 AACTTTTGCCTCTCGATTGTAAC 57.642 39.130 0.00 0.00 0.00 2.50
292 295 3.751698 ACTTTTGCCTCTCGATTGTAACC 59.248 43.478 0.00 0.00 0.00 2.85
293 296 2.396590 TTGCCTCTCGATTGTAACCC 57.603 50.000 0.00 0.00 0.00 4.11
294 297 1.568504 TGCCTCTCGATTGTAACCCT 58.431 50.000 0.00 0.00 0.00 4.34
295 298 2.742348 TGCCTCTCGATTGTAACCCTA 58.258 47.619 0.00 0.00 0.00 3.53
296 299 3.305720 TGCCTCTCGATTGTAACCCTAT 58.694 45.455 0.00 0.00 0.00 2.57
297 300 3.709653 TGCCTCTCGATTGTAACCCTATT 59.290 43.478 0.00 0.00 0.00 1.73
298 301 4.202223 TGCCTCTCGATTGTAACCCTATTC 60.202 45.833 0.00 0.00 0.00 1.75
299 302 4.039366 GCCTCTCGATTGTAACCCTATTCT 59.961 45.833 0.00 0.00 0.00 2.40
300 303 5.453480 GCCTCTCGATTGTAACCCTATTCTT 60.453 44.000 0.00 0.00 0.00 2.52
301 304 6.239232 GCCTCTCGATTGTAACCCTATTCTTA 60.239 42.308 0.00 0.00 0.00 2.10
302 305 7.525692 GCCTCTCGATTGTAACCCTATTCTTAT 60.526 40.741 0.00 0.00 0.00 1.73
303 306 7.815068 CCTCTCGATTGTAACCCTATTCTTATG 59.185 40.741 0.00 0.00 0.00 1.90
304 307 7.667557 TCTCGATTGTAACCCTATTCTTATGG 58.332 38.462 0.00 0.00 0.00 2.74
305 308 7.507956 TCTCGATTGTAACCCTATTCTTATGGA 59.492 37.037 0.00 0.00 0.00 3.41
306 309 8.025270 TCGATTGTAACCCTATTCTTATGGAA 57.975 34.615 0.00 0.00 38.41 3.53
307 310 8.656806 TCGATTGTAACCCTATTCTTATGGAAT 58.343 33.333 0.00 0.00 45.53 3.01
308 311 9.938280 CGATTGTAACCCTATTCTTATGGAATA 57.062 33.333 0.00 0.00 43.59 1.75
323 326 9.901172 TCTTATGGAATAAAACTCTTTACCCTC 57.099 33.333 0.00 0.00 38.53 4.30
324 327 8.726870 TTATGGAATAAAACTCTTTACCCTCG 57.273 34.615 0.00 0.00 35.49 4.63
325 328 6.117975 TGGAATAAAACTCTTTACCCTCGT 57.882 37.500 0.00 0.00 29.82 4.18
326 329 7.243604 TGGAATAAAACTCTTTACCCTCGTA 57.756 36.000 0.00 0.00 29.82 3.43
327 330 7.678837 TGGAATAAAACTCTTTACCCTCGTAA 58.321 34.615 0.00 0.00 32.50 3.18
328 331 8.156165 TGGAATAAAACTCTTTACCCTCGTAAA 58.844 33.333 0.00 0.00 41.18 2.01
329 332 9.002600 GGAATAAAACTCTTTACCCTCGTAAAA 57.997 33.333 0.00 0.00 42.46 1.52
398 401 3.290710 CCTCCACAACCTCCATATTTGG 58.709 50.000 0.00 0.00 45.15 3.28
414 417 3.627395 TTTGGATGCTACGAGGTCATT 57.373 42.857 0.00 0.00 0.00 2.57
459 463 3.632189 TGACGATCTTGACGCATATGAG 58.368 45.455 6.97 5.79 0.00 2.90
460 464 3.066760 TGACGATCTTGACGCATATGAGT 59.933 43.478 12.23 12.23 0.00 3.41
461 465 4.045104 GACGATCTTGACGCATATGAGTT 58.955 43.478 13.60 0.00 0.00 3.01
462 466 5.183014 ACGATCTTGACGCATATGAGTTA 57.817 39.130 13.60 6.76 0.00 2.24
463 467 5.773575 ACGATCTTGACGCATATGAGTTAT 58.226 37.500 13.60 5.64 0.00 1.89
464 468 6.216569 ACGATCTTGACGCATATGAGTTATT 58.783 36.000 13.60 0.00 0.00 1.40
465 469 7.368059 ACGATCTTGACGCATATGAGTTATTA 58.632 34.615 13.60 1.69 0.00 0.98
486 890 3.321497 ACGACTCTGCTAGCTTCTTTTG 58.679 45.455 17.23 3.20 0.00 2.44
487 891 2.093467 CGACTCTGCTAGCTTCTTTTGC 59.907 50.000 17.23 0.00 0.00 3.68
499 903 2.094762 TCTTTTGCCGGCTAGTTCTC 57.905 50.000 29.70 0.00 0.00 2.87
510 914 2.100087 GGCTAGTTCTCTGTGAGTAGGC 59.900 54.545 0.00 8.15 34.17 3.93
528 932 1.195115 GCCAGTAGAGTGGTGGATGA 58.805 55.000 5.31 0.00 40.09 2.92
529 933 1.765314 GCCAGTAGAGTGGTGGATGAT 59.235 52.381 5.31 0.00 40.09 2.45
537 941 4.649692 AGAGTGGTGGATGATGATTATGC 58.350 43.478 0.00 0.00 0.00 3.14
541 945 2.417933 GGTGGATGATGATTATGCGCTC 59.582 50.000 9.73 0.00 0.00 5.03
545 949 3.120408 GGATGATGATTATGCGCTCACAC 60.120 47.826 9.73 2.94 0.00 3.82
588 992 4.273969 GTCGTTATGAAGGTGTTGGTTTGA 59.726 41.667 0.00 0.00 0.00 2.69
606 1010 1.284785 TGAAATTCTGCTCCGGGGATT 59.715 47.619 4.80 0.00 0.00 3.01
707 1384 2.412770 CAGAATTGTTTTCCAATGCGCC 59.587 45.455 4.18 0.00 43.07 6.53
844 1526 6.317391 CCTTCAACTTCCATACCATCTCTTTC 59.683 42.308 0.00 0.00 0.00 2.62
891 1581 0.100682 CTCCACGACCACGACCATAG 59.899 60.000 0.00 0.00 42.66 2.23
959 1653 2.151502 TCCAGAGAAGAATCGGAGCT 57.848 50.000 0.00 0.00 0.00 4.09
1039 1739 0.184451 CGGCCCCTACTCCTACTACA 59.816 60.000 0.00 0.00 0.00 2.74
1040 1740 1.410648 CGGCCCCTACTCCTACTACAA 60.411 57.143 0.00 0.00 0.00 2.41
1041 1741 2.037901 GGCCCCTACTCCTACTACAAC 58.962 57.143 0.00 0.00 0.00 3.32
1070 1770 2.182842 CCGCGCCCTACTACTACGT 61.183 63.158 0.00 0.00 0.00 3.57
1365 2074 3.884350 TACTACAGGAGCGGCGCG 61.884 66.667 27.59 14.86 0.00 6.86
1503 2212 4.329545 GGCCGGTGAAGAGGTGCA 62.330 66.667 1.90 0.00 0.00 4.57
1504 2213 2.743928 GCCGGTGAAGAGGTGCAG 60.744 66.667 1.90 0.00 0.00 4.41
1531 2240 1.592223 GTGAGGTTAGGCTGCGTCT 59.408 57.895 0.00 0.00 0.00 4.18
1552 2264 1.287815 GTGCATGAAGCTGCTTGCA 59.712 52.632 27.08 27.08 43.77 4.08
1559 2271 2.164338 TGAAGCTGCTTGCATGATCAA 58.836 42.857 21.25 0.00 45.94 2.57
1560 2272 2.758423 TGAAGCTGCTTGCATGATCAAT 59.242 40.909 21.25 0.00 45.94 2.57
1561 2273 3.194755 TGAAGCTGCTTGCATGATCAATT 59.805 39.130 21.25 0.00 45.94 2.32
1562 2274 3.165058 AGCTGCTTGCATGATCAATTG 57.835 42.857 0.00 0.00 45.94 2.32
1563 2275 2.758423 AGCTGCTTGCATGATCAATTGA 59.242 40.909 11.26 11.26 45.94 2.57
1564 2276 2.858344 GCTGCTTGCATGATCAATTGAC 59.142 45.455 11.07 5.73 42.31 3.18
1565 2277 3.444916 CTGCTTGCATGATCAATTGACC 58.555 45.455 11.07 0.14 0.00 4.02
1566 2278 2.826725 TGCTTGCATGATCAATTGACCA 59.173 40.909 11.07 7.85 0.00 4.02
1567 2279 3.449377 TGCTTGCATGATCAATTGACCAT 59.551 39.130 9.69 9.69 0.00 3.55
1568 2280 3.802139 GCTTGCATGATCAATTGACCATG 59.198 43.478 30.95 30.95 46.49 3.66
1569 2281 4.368315 CTTGCATGATCAATTGACCATGG 58.632 43.478 33.94 19.61 44.44 3.66
1570 2282 2.101750 TGCATGATCAATTGACCATGGC 59.898 45.455 33.94 27.07 44.44 4.40
1571 2283 2.547218 GCATGATCAATTGACCATGGCC 60.547 50.000 33.94 20.20 44.44 5.36
1572 2284 2.528673 TGATCAATTGACCATGGCCA 57.471 45.000 13.04 8.56 0.00 5.36
1573 2285 3.035055 TGATCAATTGACCATGGCCAT 57.965 42.857 14.09 14.09 0.00 4.40
1574 2286 2.696187 TGATCAATTGACCATGGCCATG 59.304 45.455 34.82 34.82 38.51 3.66
1594 2306 1.369692 CCGTGGCCAGTCTGTTGTA 59.630 57.895 5.11 0.00 0.00 2.41
1595 2307 0.036388 CCGTGGCCAGTCTGTTGTAT 60.036 55.000 5.11 0.00 0.00 2.29
1596 2308 1.206132 CCGTGGCCAGTCTGTTGTATA 59.794 52.381 5.11 0.00 0.00 1.47
1601 2313 4.700213 GTGGCCAGTCTGTTGTATATTGTT 59.300 41.667 5.11 0.00 0.00 2.83
1620 2332 0.264657 TGGAGGAGCTAGCCATGGTA 59.735 55.000 14.67 3.81 0.00 3.25
1634 2346 3.415212 CCATGGTAGGCATGTCCATTAG 58.585 50.000 2.57 0.39 39.57 1.73
1637 2351 2.843730 TGGTAGGCATGTCCATTAGTGT 59.156 45.455 8.58 0.00 37.29 3.55
1639 2353 2.315925 AGGCATGTCCATTAGTGTCG 57.684 50.000 8.58 0.00 37.29 4.35
1647 2361 3.513912 TGTCCATTAGTGTCGTGAATCCT 59.486 43.478 0.00 0.00 0.00 3.24
1651 2365 4.503007 CCATTAGTGTCGTGAATCCTTACG 59.497 45.833 0.00 0.00 41.38 3.18
1660 2374 5.007430 GTCGTGAATCCTTACGTCTAGATGA 59.993 44.000 18.95 0.00 40.87 2.92
1680 2398 6.660521 AGATGATTCTGCTGGTTTTCATACAA 59.339 34.615 0.00 0.00 0.00 2.41
1683 2401 5.689383 TTCTGCTGGTTTTCATACAACTC 57.311 39.130 0.00 0.00 0.00 3.01
1713 2431 6.433404 AGAGATGCAAGAATTTCACATGAAGT 59.567 34.615 0.00 0.00 35.21 3.01
1744 2470 4.095334 TCTTGGTGAATGAGCAAATCGATG 59.905 41.667 0.00 0.00 41.48 3.84
1756 2482 4.918037 GCAAATCGATGCTTCTTTCATCT 58.082 39.130 0.00 0.00 43.06 2.90
1757 2483 5.338365 GCAAATCGATGCTTCTTTCATCTT 58.662 37.500 0.00 0.00 43.06 2.40
1758 2484 6.489675 GCAAATCGATGCTTCTTTCATCTTA 58.510 36.000 0.00 0.00 43.06 2.10
1759 2485 7.137426 GCAAATCGATGCTTCTTTCATCTTAT 58.863 34.615 0.00 0.00 43.06 1.73
1770 2496 8.811378 GCTTCTTTCATCTTATTAAAATGCACC 58.189 33.333 0.00 0.00 0.00 5.01
1787 2513 1.262151 CACCGGGTCTTTACAACAACG 59.738 52.381 6.32 0.00 0.00 4.10
1790 2516 3.244181 ACCGGGTCTTTACAACAACGTAT 60.244 43.478 6.32 0.00 0.00 3.06
1809 2535 9.103048 CAACGTATTGTCAAAACTATTCAAGAC 57.897 33.333 0.00 0.00 0.00 3.01
1810 2536 8.373048 ACGTATTGTCAAAACTATTCAAGACA 57.627 30.769 0.00 0.00 32.24 3.41
1812 2538 9.825972 CGTATTGTCAAAACTATTCAAGACATT 57.174 29.630 0.00 0.00 36.10 2.71
1817 2543 7.719193 TGTCAAAACTATTCAAGACATTGAGGA 59.281 33.333 0.00 0.00 45.89 3.71
1818 2544 8.734386 GTCAAAACTATTCAAGACATTGAGGAT 58.266 33.333 0.00 0.00 45.89 3.24
1820 2546 9.918630 CAAAACTATTCAAGACATTGAGGATTT 57.081 29.630 0.00 0.00 45.89 2.17
1821 2547 9.918630 AAAACTATTCAAGACATTGAGGATTTG 57.081 29.630 0.00 0.00 45.89 2.32
1822 2548 8.868522 AACTATTCAAGACATTGAGGATTTGA 57.131 30.769 0.00 0.00 45.89 2.69
1823 2549 8.503458 ACTATTCAAGACATTGAGGATTTGAG 57.497 34.615 0.00 0.00 45.89 3.02
1826 2552 5.634118 TCAAGACATTGAGGATTTGAGGTT 58.366 37.500 0.00 0.00 40.54 3.50
1843 2569 8.948631 TTTGAGGTTGCACACAATAAAATTAA 57.051 26.923 0.00 0.00 38.27 1.40
1866 2611 1.068333 CACCCAAAAGTCATGCCGAAG 60.068 52.381 0.00 0.00 0.00 3.79
1872 2617 3.616956 AAAGTCATGCCGAAGAGATCA 57.383 42.857 0.00 0.00 0.00 2.92
1878 2623 0.601057 TGCCGAAGAGATCAACGACA 59.399 50.000 0.00 0.00 0.00 4.35
1883 2628 4.421058 CCGAAGAGATCAACGACACAATA 58.579 43.478 0.00 0.00 0.00 1.90
1884 2629 4.862574 CCGAAGAGATCAACGACACAATAA 59.137 41.667 0.00 0.00 0.00 1.40
1885 2630 5.220228 CCGAAGAGATCAACGACACAATAAC 60.220 44.000 0.00 0.00 0.00 1.89
1889 2634 3.367932 AGATCAACGACACAATAACGCAG 59.632 43.478 0.00 0.00 0.00 5.18
1913 2658 5.577835 CAACCATTAATATCAACACCACCG 58.422 41.667 0.00 0.00 0.00 4.94
1916 2661 5.124776 ACCATTAATATCAACACCACCGTTG 59.875 40.000 0.00 0.00 46.21 4.10
1929 2674 3.864944 CGTTGGCATAACGGTCGT 58.135 55.556 15.21 0.00 39.73 4.34
1930 2675 1.705727 CGTTGGCATAACGGTCGTC 59.294 57.895 15.21 0.00 39.73 4.20
1931 2676 0.734942 CGTTGGCATAACGGTCGTCT 60.735 55.000 15.21 0.00 39.73 4.18
1932 2677 0.997196 GTTGGCATAACGGTCGTCTC 59.003 55.000 0.00 0.00 0.00 3.36
1940 2704 4.599047 CATAACGGTCGTCTCTAAGAAGG 58.401 47.826 0.00 0.00 0.00 3.46
1945 2709 3.427773 CGGTCGTCTCTAAGAAGGGAAAG 60.428 52.174 0.00 0.00 32.67 2.62
1947 2711 4.403113 GGTCGTCTCTAAGAAGGGAAAGAT 59.597 45.833 0.00 0.00 32.67 2.40
1952 2716 3.861840 TCTAAGAAGGGAAAGATGCACG 58.138 45.455 0.00 0.00 0.00 5.34
1955 2719 3.356529 AGAAGGGAAAGATGCACGAAT 57.643 42.857 0.00 0.00 0.00 3.34
1965 2729 4.481870 GCACGAATGCCACCATTG 57.518 55.556 0.00 0.00 46.97 2.82
1966 2730 1.806758 GCACGAATGCCACCATTGC 60.807 57.895 0.00 0.00 46.97 3.56
1980 2744 1.202486 CCATTGCAGATCCAACCATGC 60.202 52.381 0.00 0.00 39.14 4.06
1982 2746 2.876581 TGCAGATCCAACCATGCAG 58.123 52.632 1.25 0.00 43.34 4.41
1990 2754 4.411540 AGATCCAACCATGCAGACTAGATT 59.588 41.667 0.00 0.00 0.00 2.40
1991 2755 3.877559 TCCAACCATGCAGACTAGATTG 58.122 45.455 0.00 0.00 0.00 2.67
1993 2757 3.376234 CCAACCATGCAGACTAGATTGTG 59.624 47.826 0.00 0.00 0.00 3.33
1995 2759 2.840038 ACCATGCAGACTAGATTGTGGA 59.160 45.455 0.00 0.00 0.00 4.02
2003 2767 5.645497 GCAGACTAGATTGTGGATTTTCACT 59.355 40.000 0.00 0.00 38.40 3.41
2006 2770 5.178797 ACTAGATTGTGGATTTTCACTCGG 58.821 41.667 0.00 0.00 38.40 4.63
2008 2772 4.848357 AGATTGTGGATTTTCACTCGGAT 58.152 39.130 0.00 0.00 38.40 4.18
2017 2781 6.094048 TGGATTTTCACTCGGATGAGAAATTC 59.906 38.462 0.00 0.00 45.57 2.17
2018 2782 6.094048 GGATTTTCACTCGGATGAGAAATTCA 59.906 38.462 15.54 0.00 45.57 2.57
2027 2792 5.649395 TCGGATGAGAAATTCAAGCAATCTT 59.351 36.000 0.00 0.00 39.77 2.40
2030 2795 6.534079 GGATGAGAAATTCAAGCAATCTTTGG 59.466 38.462 0.00 0.00 39.77 3.28
2043 2808 5.048224 AGCAATCTTTGGACAATGTCTTCAG 60.048 40.000 13.53 6.62 32.47 3.02
2048 2813 2.507484 TGGACAATGTCTTCAGCAAGG 58.493 47.619 13.53 0.00 32.47 3.61
2049 2814 2.106338 TGGACAATGTCTTCAGCAAGGA 59.894 45.455 13.53 0.00 32.47 3.36
2052 2817 4.540824 GACAATGTCTTCAGCAAGGAAAC 58.459 43.478 6.07 0.00 0.00 2.78
2055 2820 2.210116 TGTCTTCAGCAAGGAAACGAC 58.790 47.619 0.00 0.00 0.00 4.34
2056 2821 2.210116 GTCTTCAGCAAGGAAACGACA 58.790 47.619 0.00 0.00 0.00 4.35
2062 2827 1.880027 AGCAAGGAAACGACATGGAAC 59.120 47.619 0.00 0.00 0.00 3.62
2064 2829 1.539827 CAAGGAAACGACATGGAACCC 59.460 52.381 0.00 0.00 0.00 4.11
2065 2830 1.064825 AGGAAACGACATGGAACCCT 58.935 50.000 0.00 0.00 0.00 4.34
2066 2831 1.423921 AGGAAACGACATGGAACCCTT 59.576 47.619 0.00 0.00 0.00 3.95
2069 2834 0.953960 AACGACATGGAACCCTTCGC 60.954 55.000 0.00 0.00 32.91 4.70
2070 2835 1.375396 CGACATGGAACCCTTCGCA 60.375 57.895 0.00 0.00 0.00 5.10
2078 2845 2.007608 GGAACCCTTCGCAGTACAATC 58.992 52.381 0.00 0.00 0.00 2.67
2088 2855 6.479990 CCTTCGCAGTACAATCAATGAAGATA 59.520 38.462 0.00 0.00 34.90 1.98
2115 2883 9.566432 AGACTCAATAGTTTTCACTCTGAATTT 57.434 29.630 0.00 0.00 34.30 1.82
2126 2894 6.041423 TCACTCTGAATTTGAGAGCATGTA 57.959 37.500 12.15 0.00 40.69 2.29
2129 2897 6.370994 CACTCTGAATTTGAGAGCATGTACTT 59.629 38.462 12.15 0.00 40.69 2.24
2141 2909 4.344104 AGCATGTACTTAAAAGGCACCAT 58.656 39.130 0.00 0.00 0.00 3.55
2142 2910 4.399303 AGCATGTACTTAAAAGGCACCATC 59.601 41.667 0.00 0.00 0.00 3.51
2147 2915 4.600692 ACTTAAAAGGCACCATCAAACC 57.399 40.909 0.00 0.00 0.00 3.27
2148 2916 3.964031 ACTTAAAAGGCACCATCAAACCA 59.036 39.130 0.00 0.00 0.00 3.67
2153 2921 0.749649 GGCACCATCAAACCACACAA 59.250 50.000 0.00 0.00 0.00 3.33
2157 2925 1.673920 ACCATCAAACCACACAACGAC 59.326 47.619 0.00 0.00 0.00 4.34
2160 2928 2.904011 TCAAACCACACAACGACAAC 57.096 45.000 0.00 0.00 0.00 3.32
2169 2937 1.002900 CACAACGACAACCGCTCATTT 60.003 47.619 0.00 0.00 43.32 2.32
2171 2939 1.002900 CAACGACAACCGCTCATTTGT 60.003 47.619 0.00 0.00 43.32 2.83
2174 2942 1.127951 CGACAACCGCTCATTTGTACC 59.872 52.381 0.00 0.00 36.06 3.34
2175 2943 2.423577 GACAACCGCTCATTTGTACCT 58.576 47.619 0.00 0.00 36.06 3.08
2176 2944 3.592059 GACAACCGCTCATTTGTACCTA 58.408 45.455 0.00 0.00 36.06 3.08
2177 2945 3.998341 GACAACCGCTCATTTGTACCTAA 59.002 43.478 0.00 0.00 36.06 2.69
2183 2953 4.271049 CCGCTCATTTGTACCTAAGACATG 59.729 45.833 0.00 0.00 0.00 3.21
2184 2954 4.260375 CGCTCATTTGTACCTAAGACATGC 60.260 45.833 0.00 0.00 0.00 4.06
2185 2955 4.635765 GCTCATTTGTACCTAAGACATGCA 59.364 41.667 0.00 0.00 0.00 3.96
2189 2959 7.334858 TCATTTGTACCTAAGACATGCACATA 58.665 34.615 0.00 0.00 0.00 2.29
2191 2961 6.978343 TTGTACCTAAGACATGCACATAAC 57.022 37.500 0.00 0.00 0.00 1.89
2194 2964 7.109501 TGTACCTAAGACATGCACATAACAAT 58.890 34.615 0.00 0.00 0.00 2.71
2195 2965 6.441093 ACCTAAGACATGCACATAACAATG 57.559 37.500 0.00 0.00 0.00 2.82
2196 2966 6.179756 ACCTAAGACATGCACATAACAATGA 58.820 36.000 0.00 0.00 0.00 2.57
2200 2970 5.494724 AGACATGCACATAACAATGAGACT 58.505 37.500 0.00 0.00 0.00 3.24
2207 2977 6.207221 TGCACATAACAATGAGACTGAACATT 59.793 34.615 0.00 0.00 37.22 2.71
2208 2978 7.086376 GCACATAACAATGAGACTGAACATTT 58.914 34.615 0.00 0.00 35.01 2.32
2209 2979 8.236586 GCACATAACAATGAGACTGAACATTTA 58.763 33.333 0.00 0.00 35.01 1.40
2223 2993 9.341899 GACTGAACATTTAATTTCCACATACAC 57.658 33.333 0.00 0.00 0.00 2.90
2227 2997 7.083875 ACATTTAATTTCCACATACACGAGG 57.916 36.000 0.00 0.00 0.00 4.63
2231 3001 3.478857 TTTCCACATACACGAGGTGTT 57.521 42.857 6.72 0.00 45.08 3.32
2235 3005 2.288825 CCACATACACGAGGTGTTGAGT 60.289 50.000 6.72 1.42 45.08 3.41
2238 3008 4.077108 ACATACACGAGGTGTTGAGTAGA 58.923 43.478 6.72 0.00 45.08 2.59
2244 3014 3.827302 ACGAGGTGTTGAGTAGAGTCAAT 59.173 43.478 3.21 0.00 38.68 2.57
2252 3022 5.717178 TGTTGAGTAGAGTCAATAGAAGCCT 59.283 40.000 3.21 0.00 38.68 4.58
2253 3023 6.890268 TGTTGAGTAGAGTCAATAGAAGCCTA 59.110 38.462 3.21 0.00 38.68 3.93
2258 3028 3.633065 AGAGTCAATAGAAGCCTACGACC 59.367 47.826 0.00 0.00 33.98 4.79
2261 3031 5.138276 AGTCAATAGAAGCCTACGACCATA 58.862 41.667 0.00 0.00 33.98 2.74
2262 3032 5.241949 AGTCAATAGAAGCCTACGACCATAG 59.758 44.000 0.00 0.00 33.98 2.23
2265 3035 6.493802 TCAATAGAAGCCTACGACCATAGATT 59.506 38.462 0.00 0.00 0.00 2.40
2271 3041 3.119919 GCCTACGACCATAGATTAGGACG 60.120 52.174 0.00 0.00 45.93 4.79
2284 3054 0.031917 TAGGACGCCCTCCACCATTA 60.032 55.000 0.00 0.00 43.14 1.90
2285 3055 0.694444 AGGACGCCCTCCACCATTAT 60.694 55.000 0.00 0.00 42.46 1.28
2291 3065 1.128200 CCCTCCACCATTATCGGTCA 58.872 55.000 0.00 0.00 37.07 4.02
2297 3071 2.223947 CCACCATTATCGGTCATCACGA 60.224 50.000 0.00 0.00 45.19 4.35
2317 3091 2.257409 ATCCCGCTAACCAGCCACTG 62.257 60.000 0.00 0.00 45.64 3.66
2320 3094 2.680913 CGCTAACCAGCCACTGTGC 61.681 63.158 1.29 0.00 45.64 4.57
2321 3095 1.600636 GCTAACCAGCCACTGTGCA 60.601 57.895 1.29 0.00 42.37 4.57
2329 3103 2.594303 CCACTGTGCAAGGCCGAA 60.594 61.111 1.29 0.00 0.00 4.30
2330 3104 1.973281 CCACTGTGCAAGGCCGAAT 60.973 57.895 1.29 0.00 0.00 3.34
2331 3105 1.526575 CCACTGTGCAAGGCCGAATT 61.527 55.000 1.29 0.00 0.00 2.17
2332 3106 0.109597 CACTGTGCAAGGCCGAATTC 60.110 55.000 0.00 0.00 0.00 2.17
2333 3107 1.135315 CTGTGCAAGGCCGAATTCG 59.865 57.895 20.92 20.92 39.44 3.34
2334 3108 1.577328 CTGTGCAAGGCCGAATTCGT 61.577 55.000 25.10 5.35 37.74 3.85
2335 3109 1.169661 TGTGCAAGGCCGAATTCGTT 61.170 50.000 25.10 11.34 37.74 3.85
2336 3110 0.729140 GTGCAAGGCCGAATTCGTTG 60.729 55.000 25.10 22.04 37.74 4.10
2337 3111 1.801512 GCAAGGCCGAATTCGTTGC 60.802 57.895 27.77 27.77 40.04 4.17
2338 3112 1.154035 CAAGGCCGAATTCGTTGCC 60.154 57.895 29.71 29.71 43.75 4.52
2339 3113 1.602323 AAGGCCGAATTCGTTGCCA 60.602 52.632 34.53 0.00 45.13 4.92
2340 3114 1.175983 AAGGCCGAATTCGTTGCCAA 61.176 50.000 34.53 0.00 45.13 4.52
2341 3115 1.175983 AGGCCGAATTCGTTGCCAAA 61.176 50.000 34.53 0.00 45.13 3.28
2342 3116 0.319125 GGCCGAATTCGTTGCCAAAA 60.319 50.000 31.01 0.00 43.19 2.44
2343 3117 1.059942 GCCGAATTCGTTGCCAAAAG 58.940 50.000 25.10 8.61 37.74 2.27
2344 3118 1.059942 CCGAATTCGTTGCCAAAAGC 58.940 50.000 25.10 0.00 38.95 3.51
2345 3119 1.059942 CGAATTCGTTGCCAAAAGCC 58.940 50.000 19.67 0.00 35.99 4.35
2346 3120 1.335872 CGAATTCGTTGCCAAAAGCCT 60.336 47.619 19.67 0.00 35.99 4.58
2347 3121 2.754472 GAATTCGTTGCCAAAAGCCTT 58.246 42.857 0.00 0.00 42.71 4.35
2348 3122 2.908688 ATTCGTTGCCAAAAGCCTTT 57.091 40.000 0.00 0.00 42.71 3.11
2349 3123 4.303282 GAATTCGTTGCCAAAAGCCTTTA 58.697 39.130 0.00 0.00 42.71 1.85
2350 3124 4.535526 ATTCGTTGCCAAAAGCCTTTAT 57.464 36.364 0.00 0.00 42.71 1.40
2351 3125 4.329462 TTCGTTGCCAAAAGCCTTTATT 57.671 36.364 0.00 0.00 42.71 1.40
2352 3126 3.908213 TCGTTGCCAAAAGCCTTTATTC 58.092 40.909 0.00 0.00 42.71 1.75
2353 3127 3.319405 TCGTTGCCAAAAGCCTTTATTCA 59.681 39.130 0.00 0.00 42.71 2.57
2354 3128 4.054671 CGTTGCCAAAAGCCTTTATTCAA 58.945 39.130 0.00 0.00 42.71 2.69
2355 3129 4.084589 CGTTGCCAAAAGCCTTTATTCAAC 60.085 41.667 13.65 13.65 42.71 3.18
2356 3130 3.648009 TGCCAAAAGCCTTTATTCAACG 58.352 40.909 0.00 0.00 42.71 4.10
2357 3131 2.993220 GCCAAAAGCCTTTATTCAACGG 59.007 45.455 0.00 0.00 34.35 4.44
2358 3132 2.993220 CCAAAAGCCTTTATTCAACGGC 59.007 45.455 0.00 0.00 46.80 5.68
2362 3136 2.959507 GCCTTTATTCAACGGCCATT 57.040 45.000 2.24 0.00 41.98 3.16
2363 3137 3.245518 GCCTTTATTCAACGGCCATTT 57.754 42.857 2.24 0.00 41.98 2.32
2364 3138 2.929398 GCCTTTATTCAACGGCCATTTG 59.071 45.455 2.24 5.55 41.98 2.32
2365 3139 3.520569 CCTTTATTCAACGGCCATTTGG 58.479 45.455 12.96 0.00 38.53 3.28
2366 3140 3.056179 CCTTTATTCAACGGCCATTTGGT 60.056 43.478 12.96 6.29 37.57 3.67
2367 3141 4.158764 CCTTTATTCAACGGCCATTTGGTA 59.841 41.667 12.96 5.50 37.57 3.25
2368 3142 4.974368 TTATTCAACGGCCATTTGGTAG 57.026 40.909 12.96 0.00 37.57 3.18
2369 3143 0.885196 TTCAACGGCCATTTGGTAGC 59.115 50.000 12.96 0.00 37.57 3.58
2370 3144 0.963355 TCAACGGCCATTTGGTAGCC 60.963 55.000 12.96 0.00 43.53 3.93
2371 3145 1.680989 AACGGCCATTTGGTAGCCC 60.681 57.895 2.24 0.00 44.13 5.19
2372 3146 2.833121 CGGCCATTTGGTAGCCCC 60.833 66.667 2.24 0.00 44.13 5.80
2373 3147 2.362565 GGCCATTTGGTAGCCCCA 59.637 61.111 0.00 0.00 43.27 4.96
2374 3148 1.075301 GGCCATTTGGTAGCCCCAT 60.075 57.895 0.00 0.00 44.74 4.00
2375 3149 1.402107 GGCCATTTGGTAGCCCCATG 61.402 60.000 0.00 0.00 44.74 3.66
2376 3150 2.031674 GCCATTTGGTAGCCCCATGC 62.032 60.000 0.00 0.00 44.74 4.06
2377 3151 1.402107 CCATTTGGTAGCCCCATGCC 61.402 60.000 0.00 0.00 44.74 4.40
2378 3152 0.397535 CATTTGGTAGCCCCATGCCT 60.398 55.000 0.00 0.00 44.74 4.75
2379 3153 0.339510 ATTTGGTAGCCCCATGCCTT 59.660 50.000 0.00 0.00 44.74 4.35
2380 3154 1.003646 TTTGGTAGCCCCATGCCTTA 58.996 50.000 0.00 0.00 44.74 2.69
2381 3155 0.257616 TTGGTAGCCCCATGCCTTAC 59.742 55.000 0.00 0.00 44.74 2.34
2382 3156 0.623324 TGGTAGCCCCATGCCTTACT 60.623 55.000 0.00 0.00 42.71 2.24
2383 3157 0.108774 GGTAGCCCCATGCCTTACTC 59.891 60.000 0.00 0.00 42.71 2.59
2384 3158 0.837272 GTAGCCCCATGCCTTACTCA 59.163 55.000 0.00 0.00 42.71 3.41
2385 3159 1.421646 GTAGCCCCATGCCTTACTCAT 59.578 52.381 0.00 0.00 42.71 2.90
2386 3160 0.475906 AGCCCCATGCCTTACTCATC 59.524 55.000 0.00 0.00 42.71 2.92
2387 3161 0.183492 GCCCCATGCCTTACTCATCA 59.817 55.000 0.00 0.00 0.00 3.07
2388 3162 1.972872 CCCCATGCCTTACTCATCAC 58.027 55.000 0.00 0.00 0.00 3.06
2389 3163 1.492176 CCCCATGCCTTACTCATCACT 59.508 52.381 0.00 0.00 0.00 3.41
2390 3164 2.705658 CCCCATGCCTTACTCATCACTA 59.294 50.000 0.00 0.00 0.00 2.74
2391 3165 3.244353 CCCCATGCCTTACTCATCACTAG 60.244 52.174 0.00 0.00 0.00 2.57
2392 3166 3.643320 CCCATGCCTTACTCATCACTAGA 59.357 47.826 0.00 0.00 0.00 2.43
2393 3167 4.101585 CCCATGCCTTACTCATCACTAGAA 59.898 45.833 0.00 0.00 0.00 2.10
2394 3168 5.295950 CCATGCCTTACTCATCACTAGAAG 58.704 45.833 0.00 0.00 0.00 2.85
2395 3169 5.069648 CCATGCCTTACTCATCACTAGAAGA 59.930 44.000 0.00 0.00 0.00 2.87
2396 3170 6.407412 CCATGCCTTACTCATCACTAGAAGAA 60.407 42.308 0.00 0.00 0.00 2.52
2397 3171 5.967088 TGCCTTACTCATCACTAGAAGAAC 58.033 41.667 0.00 0.00 0.00 3.01
2398 3172 5.038033 GCCTTACTCATCACTAGAAGAACG 58.962 45.833 0.00 0.00 0.00 3.95
2399 3173 5.038033 CCTTACTCATCACTAGAAGAACGC 58.962 45.833 0.00 0.00 0.00 4.84
2400 3174 3.512033 ACTCATCACTAGAAGAACGCC 57.488 47.619 0.00 0.00 0.00 5.68
2401 3175 2.166664 ACTCATCACTAGAAGAACGCCC 59.833 50.000 0.00 0.00 0.00 6.13
2402 3176 1.134367 TCATCACTAGAAGAACGCCCG 59.866 52.381 0.00 0.00 0.00 6.13
2403 3177 1.135083 CATCACTAGAAGAACGCCCGT 60.135 52.381 0.00 0.00 0.00 5.28
2404 3178 0.242825 TCACTAGAAGAACGCCCGTG 59.757 55.000 0.00 0.00 0.00 4.94
2405 3179 1.080025 ACTAGAAGAACGCCCGTGC 60.080 57.895 0.00 0.00 0.00 5.34
2427 3201 2.902846 CAACGGGGGTTGCAACGA 60.903 61.111 22.67 0.00 0.00 3.85
2428 3202 2.593436 AACGGGGGTTGCAACGAG 60.593 61.111 22.67 15.26 0.00 4.18
2429 3203 4.636435 ACGGGGGTTGCAACGAGG 62.636 66.667 22.67 13.91 0.00 4.63
2432 3206 4.966787 GGGGTTGCAACGAGGCCA 62.967 66.667 22.67 0.00 0.00 5.36
2433 3207 3.670377 GGGTTGCAACGAGGCCAC 61.670 66.667 22.67 7.31 0.00 5.01
2434 3208 2.904866 GGTTGCAACGAGGCCACA 60.905 61.111 22.67 0.00 31.50 4.17
2435 3209 2.268076 GGTTGCAACGAGGCCACAT 61.268 57.895 22.67 0.00 31.50 3.21
2436 3210 1.659794 GTTGCAACGAGGCCACATT 59.340 52.632 14.90 0.00 30.39 2.71
2437 3211 0.878416 GTTGCAACGAGGCCACATTA 59.122 50.000 14.90 0.00 30.39 1.90
2438 3212 1.268352 GTTGCAACGAGGCCACATTAA 59.732 47.619 14.90 0.00 30.39 1.40
2439 3213 0.878416 TGCAACGAGGCCACATTAAC 59.122 50.000 5.01 0.00 0.00 2.01
2440 3214 1.165270 GCAACGAGGCCACATTAACT 58.835 50.000 5.01 0.00 0.00 2.24
2441 3215 1.539827 GCAACGAGGCCACATTAACTT 59.460 47.619 5.01 0.00 0.00 2.66
2442 3216 2.030274 GCAACGAGGCCACATTAACTTT 60.030 45.455 5.01 0.00 0.00 2.66
2443 3217 3.189702 GCAACGAGGCCACATTAACTTTA 59.810 43.478 5.01 0.00 0.00 1.85
2444 3218 4.320641 GCAACGAGGCCACATTAACTTTAA 60.321 41.667 5.01 0.00 0.00 1.52
2445 3219 5.390613 CAACGAGGCCACATTAACTTTAAG 58.609 41.667 5.01 0.00 0.00 1.85
2446 3220 4.007659 ACGAGGCCACATTAACTTTAAGG 58.992 43.478 5.01 0.00 0.00 2.69
2447 3221 3.377172 CGAGGCCACATTAACTTTAAGGG 59.623 47.826 5.01 0.00 0.00 3.95
2448 3222 3.096852 AGGCCACATTAACTTTAAGGGC 58.903 45.455 5.01 10.93 37.46 5.19
2449 3223 2.167693 GGCCACATTAACTTTAAGGGCC 59.832 50.000 17.97 17.97 44.12 5.80
2450 3224 3.096852 GCCACATTAACTTTAAGGGCCT 58.903 45.455 0.00 0.00 34.71 5.19
2451 3225 3.130516 GCCACATTAACTTTAAGGGCCTC 59.869 47.826 6.46 0.00 34.71 4.70
2452 3226 4.600062 CCACATTAACTTTAAGGGCCTCT 58.400 43.478 6.46 0.00 0.00 3.69
2453 3227 5.016831 CCACATTAACTTTAAGGGCCTCTT 58.983 41.667 6.46 7.24 39.40 2.85
2454 3228 5.480422 CCACATTAACTTTAAGGGCCTCTTT 59.520 40.000 6.46 0.00 36.93 2.52
2455 3229 6.389906 CACATTAACTTTAAGGGCCTCTTTG 58.610 40.000 6.46 0.22 36.93 2.77
2456 3230 6.208599 CACATTAACTTTAAGGGCCTCTTTGA 59.791 38.462 6.46 0.00 36.93 2.69
2457 3231 6.954102 ACATTAACTTTAAGGGCCTCTTTGAT 59.046 34.615 6.46 0.00 36.93 2.57
2458 3232 7.454694 ACATTAACTTTAAGGGCCTCTTTGATT 59.545 33.333 6.46 0.00 36.93 2.57
2459 3233 5.984695 AACTTTAAGGGCCTCTTTGATTC 57.015 39.130 6.46 0.00 36.93 2.52
2460 3234 4.998051 ACTTTAAGGGCCTCTTTGATTCA 58.002 39.130 6.46 0.00 36.93 2.57
2461 3235 5.393866 ACTTTAAGGGCCTCTTTGATTCAA 58.606 37.500 6.46 0.00 36.93 2.69
2462 3236 5.838521 ACTTTAAGGGCCTCTTTGATTCAAA 59.161 36.000 6.46 11.19 36.93 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.485163 GCAAACAGTTGTGTTGACTTCTT 58.515 39.130 9.69 0.00 46.68 2.52
31 32 5.530915 TCTCTTCCAATTAAATGGGCATACG 59.469 40.000 9.72 0.00 41.05 3.06
33 34 7.416213 CGTTTCTCTTCCAATTAAATGGGCATA 60.416 37.037 9.72 0.00 41.05 3.14
36 37 5.102313 CGTTTCTCTTCCAATTAAATGGGC 58.898 41.667 9.72 0.00 41.05 5.36
41 42 9.078753 GTTTTCAACGTTTCTCTTCCAATTAAA 57.921 29.630 0.00 0.00 0.00 1.52
44 45 6.626302 TGTTTTCAACGTTTCTCTTCCAATT 58.374 32.000 0.00 0.00 0.00 2.32
45 46 6.202516 TGTTTTCAACGTTTCTCTTCCAAT 57.797 33.333 0.00 0.00 0.00 3.16
49 50 6.022484 CGAACTTGTTTTCAACGTTTCTCTTC 60.022 38.462 0.00 0.00 34.20 2.87
53 54 5.285798 TCGAACTTGTTTTCAACGTTTCT 57.714 34.783 0.00 0.00 34.20 2.52
98 100 2.045926 GGCAGTGCTCGGTTGGAT 60.046 61.111 16.11 0.00 0.00 3.41
100 102 3.925630 ATGGGCAGTGCTCGGTTGG 62.926 63.158 16.11 0.00 0.00 3.77
107 109 0.040058 TTGATGGAATGGGCAGTGCT 59.960 50.000 16.11 0.00 0.00 4.40
109 111 3.449737 AGAAATTGATGGAATGGGCAGTG 59.550 43.478 0.00 0.00 0.00 3.66
124 127 6.695278 ACATGAAACACACCGTTAAGAAATTG 59.305 34.615 0.00 0.00 36.59 2.32
138 141 4.036852 TGCGGAATAAACACATGAAACACA 59.963 37.500 0.00 0.00 0.00 3.72
139 142 4.541779 TGCGGAATAAACACATGAAACAC 58.458 39.130 0.00 0.00 0.00 3.32
140 143 4.517075 TCTGCGGAATAAACACATGAAACA 59.483 37.500 0.00 0.00 0.00 2.83
141 144 5.041951 TCTGCGGAATAAACACATGAAAC 57.958 39.130 0.00 0.00 0.00 2.78
142 145 5.697473 TTCTGCGGAATAAACACATGAAA 57.303 34.783 3.13 0.00 0.00 2.69
144 147 5.697473 TTTTCTGCGGAATAAACACATGA 57.303 34.783 9.22 0.00 0.00 3.07
145 148 6.949578 AATTTTCTGCGGAATAAACACATG 57.050 33.333 9.22 0.00 0.00 3.21
147 150 6.584563 GCTTAATTTTCTGCGGAATAAACACA 59.415 34.615 9.22 0.00 0.00 3.72
148 151 6.237201 CGCTTAATTTTCTGCGGAATAAACAC 60.237 38.462 9.22 0.00 43.97 3.32
149 152 5.797934 CGCTTAATTTTCTGCGGAATAAACA 59.202 36.000 9.22 0.00 43.97 2.83
150 153 6.243105 CGCTTAATTTTCTGCGGAATAAAC 57.757 37.500 9.22 0.07 43.97 2.01
159 162 3.201726 TGCTCACGCTTAATTTTCTGC 57.798 42.857 0.00 0.00 36.97 4.26
160 163 6.695292 ATTTTGCTCACGCTTAATTTTCTG 57.305 33.333 0.00 0.00 36.97 3.02
161 164 7.816640 TCTATTTTGCTCACGCTTAATTTTCT 58.183 30.769 0.00 0.00 36.97 2.52
162 165 7.750903 ACTCTATTTTGCTCACGCTTAATTTTC 59.249 33.333 0.00 0.00 36.97 2.29
163 166 7.593825 ACTCTATTTTGCTCACGCTTAATTTT 58.406 30.769 0.00 0.00 36.97 1.82
164 167 7.145932 ACTCTATTTTGCTCACGCTTAATTT 57.854 32.000 0.00 0.00 36.97 1.82
165 168 6.743575 ACTCTATTTTGCTCACGCTTAATT 57.256 33.333 0.00 0.00 36.97 1.40
166 169 6.018669 GCTACTCTATTTTGCTCACGCTTAAT 60.019 38.462 0.00 0.00 36.97 1.40
167 170 5.291128 GCTACTCTATTTTGCTCACGCTTAA 59.709 40.000 0.00 0.00 36.97 1.85
168 171 4.804139 GCTACTCTATTTTGCTCACGCTTA 59.196 41.667 0.00 0.00 36.97 3.09
171 174 2.930040 TGCTACTCTATTTTGCTCACGC 59.070 45.455 0.00 0.00 0.00 5.34
172 175 4.424626 TCTGCTACTCTATTTTGCTCACG 58.575 43.478 0.00 0.00 0.00 4.35
173 176 5.174761 CGATCTGCTACTCTATTTTGCTCAC 59.825 44.000 0.00 0.00 0.00 3.51
174 177 5.284864 CGATCTGCTACTCTATTTTGCTCA 58.715 41.667 0.00 0.00 0.00 4.26
176 179 4.100189 ACCGATCTGCTACTCTATTTTGCT 59.900 41.667 0.00 0.00 0.00 3.91
177 180 4.372656 ACCGATCTGCTACTCTATTTTGC 58.627 43.478 0.00 0.00 0.00 3.68
178 181 6.019479 GTCAACCGATCTGCTACTCTATTTTG 60.019 42.308 0.00 0.00 0.00 2.44
179 182 6.043411 GTCAACCGATCTGCTACTCTATTTT 58.957 40.000 0.00 0.00 0.00 1.82
180 183 5.361285 AGTCAACCGATCTGCTACTCTATTT 59.639 40.000 0.00 0.00 0.00 1.40
181 184 4.890581 AGTCAACCGATCTGCTACTCTATT 59.109 41.667 0.00 0.00 0.00 1.73
182 185 4.465886 AGTCAACCGATCTGCTACTCTAT 58.534 43.478 0.00 0.00 0.00 1.98
183 186 3.887352 AGTCAACCGATCTGCTACTCTA 58.113 45.455 0.00 0.00 0.00 2.43
184 187 2.729194 AGTCAACCGATCTGCTACTCT 58.271 47.619 0.00 0.00 0.00 3.24
185 188 3.512033 AAGTCAACCGATCTGCTACTC 57.488 47.619 0.00 0.00 0.00 2.59
186 189 3.006967 ACAAAGTCAACCGATCTGCTACT 59.993 43.478 0.00 0.00 0.00 2.57
187 190 3.326747 ACAAAGTCAACCGATCTGCTAC 58.673 45.455 0.00 0.00 0.00 3.58
188 191 3.678056 ACAAAGTCAACCGATCTGCTA 57.322 42.857 0.00 0.00 0.00 3.49
189 192 2.550830 ACAAAGTCAACCGATCTGCT 57.449 45.000 0.00 0.00 0.00 4.24
190 193 5.109903 ACTATACAAAGTCAACCGATCTGC 58.890 41.667 0.00 0.00 0.00 4.26
191 194 5.455849 CGACTATACAAAGTCAACCGATCTG 59.544 44.000 5.00 0.00 45.13 2.90
192 195 5.125097 ACGACTATACAAAGTCAACCGATCT 59.875 40.000 5.00 0.00 45.13 2.75
193 196 5.338365 ACGACTATACAAAGTCAACCGATC 58.662 41.667 5.00 0.00 45.13 3.69
194 197 5.320549 ACGACTATACAAAGTCAACCGAT 57.679 39.130 5.00 0.00 45.13 4.18
195 198 4.771590 ACGACTATACAAAGTCAACCGA 57.228 40.909 5.00 0.00 45.13 4.69
196 199 6.748658 TCAATACGACTATACAAAGTCAACCG 59.251 38.462 5.00 0.00 45.13 4.44
197 200 7.972277 TCTCAATACGACTATACAAAGTCAACC 59.028 37.037 5.00 0.00 45.13 3.77
198 201 8.906636 TCTCAATACGACTATACAAAGTCAAC 57.093 34.615 5.00 0.00 45.13 3.18
199 202 9.350357 GTTCTCAATACGACTATACAAAGTCAA 57.650 33.333 5.00 0.00 45.13 3.18
200 203 8.517056 TGTTCTCAATACGACTATACAAAGTCA 58.483 33.333 5.00 0.00 45.13 3.41
201 204 8.796278 GTGTTCTCAATACGACTATACAAAGTC 58.204 37.037 0.00 0.00 42.09 3.01
202 205 8.684973 GTGTTCTCAATACGACTATACAAAGT 57.315 34.615 0.00 0.00 0.00 2.66
214 217 2.342651 CAGCAGTCGTGTTCTCAATACG 59.657 50.000 0.00 0.00 45.70 3.06
215 218 3.318017 ACAGCAGTCGTGTTCTCAATAC 58.682 45.455 0.00 0.00 0.00 1.89
216 219 3.660501 ACAGCAGTCGTGTTCTCAATA 57.339 42.857 0.00 0.00 0.00 1.90
217 220 2.533266 ACAGCAGTCGTGTTCTCAAT 57.467 45.000 0.00 0.00 0.00 2.57
218 221 3.317150 CATACAGCAGTCGTGTTCTCAA 58.683 45.455 0.00 0.00 0.00 3.02
219 222 2.352715 CCATACAGCAGTCGTGTTCTCA 60.353 50.000 0.00 0.00 0.00 3.27
220 223 2.263077 CCATACAGCAGTCGTGTTCTC 58.737 52.381 0.00 0.00 0.00 2.87
221 224 1.673033 GCCATACAGCAGTCGTGTTCT 60.673 52.381 0.00 0.00 0.00 3.01
222 225 0.721718 GCCATACAGCAGTCGTGTTC 59.278 55.000 0.00 0.00 0.00 3.18
223 226 0.321671 AGCCATACAGCAGTCGTGTT 59.678 50.000 0.00 0.00 34.23 3.32
224 227 1.135139 CTAGCCATACAGCAGTCGTGT 59.865 52.381 0.00 0.00 34.23 4.49
225 228 1.405463 TCTAGCCATACAGCAGTCGTG 59.595 52.381 0.00 0.00 34.23 4.35
226 229 1.763968 TCTAGCCATACAGCAGTCGT 58.236 50.000 0.00 0.00 34.23 4.34
227 230 2.666895 CGATCTAGCCATACAGCAGTCG 60.667 54.545 0.00 0.00 34.23 4.18
228 231 2.294791 ACGATCTAGCCATACAGCAGTC 59.705 50.000 0.00 0.00 34.23 3.51
229 232 2.035193 CACGATCTAGCCATACAGCAGT 59.965 50.000 0.00 0.00 34.23 4.40
230 233 2.608998 CCACGATCTAGCCATACAGCAG 60.609 54.545 0.00 0.00 34.23 4.24
231 234 1.341209 CCACGATCTAGCCATACAGCA 59.659 52.381 0.00 0.00 34.23 4.41
232 235 1.613925 TCCACGATCTAGCCATACAGC 59.386 52.381 0.00 0.00 0.00 4.40
233 236 2.029828 GGTCCACGATCTAGCCATACAG 60.030 54.545 0.00 0.00 0.00 2.74
234 237 1.961394 GGTCCACGATCTAGCCATACA 59.039 52.381 0.00 0.00 0.00 2.29
235 238 1.961394 TGGTCCACGATCTAGCCATAC 59.039 52.381 0.00 0.00 0.00 2.39
236 239 1.961394 GTGGTCCACGATCTAGCCATA 59.039 52.381 6.18 0.00 0.00 2.74
237 240 0.753262 GTGGTCCACGATCTAGCCAT 59.247 55.000 6.18 0.00 0.00 4.40
238 241 1.327690 GGTGGTCCACGATCTAGCCA 61.328 60.000 15.93 0.00 34.83 4.75
239 242 1.442148 GGTGGTCCACGATCTAGCC 59.558 63.158 15.93 0.00 34.83 3.93
240 243 1.065928 CGGTGGTCCACGATCTAGC 59.934 63.158 15.93 0.00 34.83 3.42
241 244 0.100682 CACGGTGGTCCACGATCTAG 59.899 60.000 15.93 5.50 34.83 2.43
242 245 1.940883 GCACGGTGGTCCACGATCTA 61.941 60.000 15.93 0.00 34.83 1.98
243 246 2.970639 CACGGTGGTCCACGATCT 59.029 61.111 15.93 0.00 34.83 2.75
244 247 2.813908 GCACGGTGGTCCACGATC 60.814 66.667 15.93 1.33 34.83 3.69
245 248 1.609635 TATGCACGGTGGTCCACGAT 61.610 55.000 15.93 3.33 34.83 3.73
246 249 2.220615 CTATGCACGGTGGTCCACGA 62.221 60.000 15.93 0.00 34.83 4.35
247 250 1.809619 CTATGCACGGTGGTCCACG 60.810 63.158 15.93 13.11 34.83 4.94
248 251 0.460284 CTCTATGCACGGTGGTCCAC 60.460 60.000 14.13 14.13 0.00 4.02
249 252 1.613317 CCTCTATGCACGGTGGTCCA 61.613 60.000 10.60 0.00 0.00 4.02
250 253 1.144057 CCTCTATGCACGGTGGTCC 59.856 63.158 10.60 0.00 0.00 4.46
251 254 0.535335 TTCCTCTATGCACGGTGGTC 59.465 55.000 10.60 0.00 0.00 4.02
252 255 0.249398 GTTCCTCTATGCACGGTGGT 59.751 55.000 10.60 0.00 0.00 4.16
253 256 0.537188 AGTTCCTCTATGCACGGTGG 59.463 55.000 10.60 0.00 0.00 4.61
254 257 2.386661 AAGTTCCTCTATGCACGGTG 57.613 50.000 3.15 3.15 0.00 4.94
255 258 3.074412 CAAAAGTTCCTCTATGCACGGT 58.926 45.455 0.00 0.00 0.00 4.83
256 259 2.159517 GCAAAAGTTCCTCTATGCACGG 60.160 50.000 0.00 0.00 38.31 4.94
257 260 2.159517 GGCAAAAGTTCCTCTATGCACG 60.160 50.000 0.00 0.00 39.40 5.34
258 261 3.084786 AGGCAAAAGTTCCTCTATGCAC 58.915 45.455 0.00 0.00 39.40 4.57
259 262 3.347216 GAGGCAAAAGTTCCTCTATGCA 58.653 45.455 0.00 0.00 44.19 3.96
266 269 3.077359 CAATCGAGAGGCAAAAGTTCCT 58.923 45.455 0.00 0.00 34.90 3.36
267 270 2.814336 ACAATCGAGAGGCAAAAGTTCC 59.186 45.455 0.00 0.00 0.00 3.62
268 271 5.383130 GTTACAATCGAGAGGCAAAAGTTC 58.617 41.667 0.00 0.00 0.00 3.01
269 272 4.215613 GGTTACAATCGAGAGGCAAAAGTT 59.784 41.667 0.00 0.00 0.00 2.66
270 273 3.751698 GGTTACAATCGAGAGGCAAAAGT 59.248 43.478 0.00 0.00 0.00 2.66
271 274 3.127030 GGGTTACAATCGAGAGGCAAAAG 59.873 47.826 0.00 0.00 0.00 2.27
272 275 3.078837 GGGTTACAATCGAGAGGCAAAA 58.921 45.455 0.00 0.00 0.00 2.44
273 276 2.304761 AGGGTTACAATCGAGAGGCAAA 59.695 45.455 0.00 0.00 0.00 3.68
274 277 1.906574 AGGGTTACAATCGAGAGGCAA 59.093 47.619 0.00 0.00 0.00 4.52
275 278 1.568504 AGGGTTACAATCGAGAGGCA 58.431 50.000 0.00 0.00 0.00 4.75
276 279 4.039366 AGAATAGGGTTACAATCGAGAGGC 59.961 45.833 0.00 0.00 0.00 4.70
277 280 5.793030 AGAATAGGGTTACAATCGAGAGG 57.207 43.478 0.00 0.00 0.00 3.69
278 281 7.815068 CCATAAGAATAGGGTTACAATCGAGAG 59.185 40.741 0.00 0.00 0.00 3.20
279 282 7.507956 TCCATAAGAATAGGGTTACAATCGAGA 59.492 37.037 0.00 0.00 34.54 4.04
280 283 7.667557 TCCATAAGAATAGGGTTACAATCGAG 58.332 38.462 0.00 0.00 34.54 4.04
281 284 7.606135 TCCATAAGAATAGGGTTACAATCGA 57.394 36.000 0.00 0.00 34.54 3.59
282 285 8.848474 ATTCCATAAGAATAGGGTTACAATCG 57.152 34.615 0.00 0.00 43.65 3.34
297 300 9.901172 GAGGGTAAAGAGTTTTATTCCATAAGA 57.099 33.333 0.00 0.00 32.26 2.10
298 301 8.827677 CGAGGGTAAAGAGTTTTATTCCATAAG 58.172 37.037 0.00 0.00 32.26 1.73
299 302 8.323567 ACGAGGGTAAAGAGTTTTATTCCATAA 58.676 33.333 0.00 0.00 32.26 1.90
300 303 7.854337 ACGAGGGTAAAGAGTTTTATTCCATA 58.146 34.615 0.00 0.00 32.26 2.74
301 304 6.718294 ACGAGGGTAAAGAGTTTTATTCCAT 58.282 36.000 0.00 0.00 32.26 3.41
302 305 6.117975 ACGAGGGTAAAGAGTTTTATTCCA 57.882 37.500 0.00 0.00 32.26 3.53
303 306 8.552083 TTTACGAGGGTAAAGAGTTTTATTCC 57.448 34.615 0.00 0.00 42.21 3.01
330 333 9.881529 GATGTTTACATTGCATTTTCATGTTTT 57.118 25.926 6.30 0.00 36.57 2.43
331 334 9.053840 TGATGTTTACATTGCATTTTCATGTTT 57.946 25.926 6.30 0.00 36.57 2.83
342 345 5.585844 AGATCGTCATGATGTTTACATTGCA 59.414 36.000 14.52 0.00 37.47 4.08
350 353 5.882000 TCATTTGGAGATCGTCATGATGTTT 59.118 36.000 14.52 4.03 37.47 2.83
398 401 3.938963 TCCAAAAATGACCTCGTAGCATC 59.061 43.478 0.00 0.00 0.00 3.91
399 402 3.950397 TCCAAAAATGACCTCGTAGCAT 58.050 40.909 0.00 0.00 0.00 3.79
400 403 3.410631 TCCAAAAATGACCTCGTAGCA 57.589 42.857 0.00 0.00 0.00 3.49
450 454 5.059832 GCAGAGTCGTAATAACTCATATGCG 59.940 44.000 0.00 0.00 44.54 4.73
455 459 5.533154 AGCTAGCAGAGTCGTAATAACTCAT 59.467 40.000 18.83 0.00 44.54 2.90
459 463 5.823353 AGAAGCTAGCAGAGTCGTAATAAC 58.177 41.667 18.83 0.00 0.00 1.89
460 464 6.452494 AAGAAGCTAGCAGAGTCGTAATAA 57.548 37.500 18.83 0.00 0.00 1.40
461 465 6.452494 AAAGAAGCTAGCAGAGTCGTAATA 57.548 37.500 18.83 0.00 0.00 0.98
462 466 4.993029 AAGAAGCTAGCAGAGTCGTAAT 57.007 40.909 18.83 0.00 0.00 1.89
463 467 4.785511 AAAGAAGCTAGCAGAGTCGTAA 57.214 40.909 18.83 0.00 0.00 3.18
464 468 4.486090 CAAAAGAAGCTAGCAGAGTCGTA 58.514 43.478 18.83 0.00 0.00 3.43
465 469 3.321497 CAAAAGAAGCTAGCAGAGTCGT 58.679 45.455 18.83 4.04 0.00 4.34
486 890 0.179124 CTCACAGAGAACTAGCCGGC 60.179 60.000 21.89 21.89 0.00 6.13
487 891 1.178276 ACTCACAGAGAACTAGCCGG 58.822 55.000 0.00 0.00 33.32 6.13
499 903 2.425312 CACTCTACTGGCCTACTCACAG 59.575 54.545 3.32 0.00 38.19 3.66
510 914 3.033909 TCATCATCCACCACTCTACTGG 58.966 50.000 0.00 0.00 37.33 4.00
528 932 2.610833 CACTGTGTGAGCGCATAATCAT 59.389 45.455 11.47 0.00 35.23 2.45
529 933 2.001872 CACTGTGTGAGCGCATAATCA 58.998 47.619 11.47 0.34 35.23 2.57
537 941 1.734117 TCGATGCACTGTGTGAGCG 60.734 57.895 9.86 10.89 35.23 5.03
541 945 0.664466 AGACGTCGATGCACTGTGTG 60.664 55.000 10.46 0.00 36.51 3.82
545 949 0.867753 GCCTAGACGTCGATGCACTG 60.868 60.000 18.22 0.00 0.00 3.66
588 992 3.884037 ATAATCCCCGGAGCAGAATTT 57.116 42.857 0.73 0.00 0.00 1.82
668 1345 0.324614 TGCGAGGACCACATGTCATT 59.675 50.000 0.00 0.00 46.38 2.57
707 1384 1.442520 CAGCAACCGCAAATCCGTG 60.443 57.895 0.00 0.00 42.27 4.94
747 1424 6.692849 TCCTTCCAAGTGATGCTGATATAT 57.307 37.500 0.00 0.00 0.00 0.86
748 1425 6.499106 TTCCTTCCAAGTGATGCTGATATA 57.501 37.500 0.00 0.00 0.00 0.86
784 1461 3.012518 ACGCGAGAGGTAGCTTTACTTA 58.987 45.455 15.93 0.00 0.00 2.24
844 1526 5.243283 GGGCTCGTGTATATATATGGTAGGG 59.757 48.000 5.44 0.00 0.00 3.53
891 1581 0.238289 TTTCTTGCTTGCGCTGCTAC 59.762 50.000 22.08 3.96 36.97 3.58
912 1602 2.616634 TGAATCTGATCTGCTCCTGC 57.383 50.000 0.00 0.00 40.20 4.85
913 1603 3.071167 TGGATGAATCTGATCTGCTCCTG 59.929 47.826 0.00 0.00 0.00 3.86
959 1653 8.204836 AGAGCTAATAATCCTAGCGAAAAAGAA 58.795 33.333 0.00 0.00 45.32 2.52
1061 1761 2.181021 GCCGCTGCACGTAGTAGT 59.819 61.111 0.00 0.00 41.61 2.73
1222 1925 2.989639 CGGGGACAGGATGAGCAA 59.010 61.111 0.00 0.00 39.69 3.91
1308 2014 3.170810 CTCGAGGAGGTACGCGAGC 62.171 68.421 15.93 6.36 42.82 5.03
1503 2212 1.874345 CTAACCTCACGCCGTCCACT 61.874 60.000 0.00 0.00 0.00 4.00
1504 2213 1.445582 CTAACCTCACGCCGTCCAC 60.446 63.158 0.00 0.00 0.00 4.02
1552 2264 3.035055 TGGCCATGGTCAATTGATCAT 57.965 42.857 25.41 25.41 46.11 2.45
1576 2288 0.036388 ATACAACAGACTGGCCACGG 60.036 55.000 0.00 0.00 0.00 4.94
1577 2289 2.665649 TATACAACAGACTGGCCACG 57.334 50.000 0.00 0.00 0.00 4.94
1578 2290 4.261801 ACAATATACAACAGACTGGCCAC 58.738 43.478 0.00 0.00 0.00 5.01
1579 2291 4.568072 ACAATATACAACAGACTGGCCA 57.432 40.909 4.71 4.71 0.00 5.36
1580 2292 4.096382 CCAACAATATACAACAGACTGGCC 59.904 45.833 7.51 0.00 0.00 5.36
1581 2293 4.941263 TCCAACAATATACAACAGACTGGC 59.059 41.667 7.51 0.00 0.00 4.85
1585 2297 5.294552 GCTCCTCCAACAATATACAACAGAC 59.705 44.000 0.00 0.00 0.00 3.51
1594 2306 3.048600 TGGCTAGCTCCTCCAACAATAT 58.951 45.455 15.72 0.00 0.00 1.28
1595 2307 2.477245 TGGCTAGCTCCTCCAACAATA 58.523 47.619 15.72 0.00 0.00 1.90
1596 2308 1.289160 TGGCTAGCTCCTCCAACAAT 58.711 50.000 15.72 0.00 0.00 2.71
1601 2313 0.264657 TACCATGGCTAGCTCCTCCA 59.735 55.000 13.04 3.66 0.00 3.86
1620 2332 1.555075 ACGACACTAATGGACATGCCT 59.445 47.619 7.54 0.00 37.63 4.75
1627 2339 4.819105 AAGGATTCACGACACTAATGGA 57.181 40.909 0.00 0.00 0.00 3.41
1630 2342 5.125097 AGACGTAAGGATTCACGACACTAAT 59.875 40.000 0.62 0.00 46.39 1.73
1634 2346 3.213249 AGACGTAAGGATTCACGACAC 57.787 47.619 0.62 0.00 46.39 3.67
1637 2351 5.121105 TCATCTAGACGTAAGGATTCACGA 58.879 41.667 0.00 0.00 46.39 4.35
1639 2353 7.593273 CAGAATCATCTAGACGTAAGGATTCAC 59.407 40.741 19.84 4.85 40.78 3.18
1647 2361 4.645136 ACCAGCAGAATCATCTAGACGTAA 59.355 41.667 0.00 0.00 33.50 3.18
1651 2365 5.877012 TGAAAACCAGCAGAATCATCTAGAC 59.123 40.000 0.00 0.00 33.50 2.59
1660 2374 5.769662 TGAGTTGTATGAAAACCAGCAGAAT 59.230 36.000 0.00 0.00 0.00 2.40
1680 2398 7.118971 GTGAAATTCTTGCATCTCTAACTGAGT 59.881 37.037 0.00 0.00 43.13 3.41
1683 2401 7.137490 TGTGAAATTCTTGCATCTCTAACTG 57.863 36.000 0.00 0.00 0.00 3.16
1713 2431 4.012374 GCTCATTCACCAAGAGAAATCCA 58.988 43.478 0.00 0.00 0.00 3.41
1744 2470 8.811378 GGTGCATTTTAATAAGATGAAAGAAGC 58.189 33.333 7.60 0.00 0.00 3.86
1756 2482 5.986501 AAAGACCCGGTGCATTTTAATAA 57.013 34.783 0.00 0.00 0.00 1.40
1757 2483 5.944599 TGTAAAGACCCGGTGCATTTTAATA 59.055 36.000 0.00 0.00 0.00 0.98
1758 2484 4.767928 TGTAAAGACCCGGTGCATTTTAAT 59.232 37.500 0.00 0.00 0.00 1.40
1759 2485 4.142790 TGTAAAGACCCGGTGCATTTTAA 58.857 39.130 0.00 0.00 0.00 1.52
1766 2492 1.002142 GTTGTTGTAAAGACCCGGTGC 60.002 52.381 0.00 0.00 0.00 5.01
1770 2496 4.211794 ACAATACGTTGTTGTAAAGACCCG 59.788 41.667 14.89 0.00 46.07 5.28
1790 2516 8.352201 CCTCAATGTCTTGAATAGTTTTGACAA 58.648 33.333 0.00 0.00 40.78 3.18
1801 2527 6.251471 ACCTCAAATCCTCAATGTCTTGAAT 58.749 36.000 0.00 0.00 40.78 2.57
1803 2529 5.246981 ACCTCAAATCCTCAATGTCTTGA 57.753 39.130 0.00 0.00 39.07 3.02
1804 2530 5.706916 CAACCTCAAATCCTCAATGTCTTG 58.293 41.667 0.00 0.00 0.00 3.02
1805 2531 4.219288 GCAACCTCAAATCCTCAATGTCTT 59.781 41.667 0.00 0.00 0.00 3.01
1807 2533 3.507233 TGCAACCTCAAATCCTCAATGTC 59.493 43.478 0.00 0.00 0.00 3.06
1809 2535 3.256383 TGTGCAACCTCAAATCCTCAATG 59.744 43.478 0.00 0.00 34.36 2.82
1810 2536 3.256631 GTGTGCAACCTCAAATCCTCAAT 59.743 43.478 0.00 0.00 34.36 2.57
1812 2538 2.229792 GTGTGCAACCTCAAATCCTCA 58.770 47.619 0.00 0.00 34.36 3.86
1813 2539 2.229792 TGTGTGCAACCTCAAATCCTC 58.770 47.619 0.00 0.00 34.36 3.71
1817 2543 9.553064 TTAATTTTATTGTGTGCAACCTCAAAT 57.447 25.926 0.00 0.00 37.44 2.32
1818 2544 8.948631 TTAATTTTATTGTGTGCAACCTCAAA 57.051 26.923 0.00 0.00 37.44 2.69
1820 2546 9.632807 GTATTAATTTTATTGTGTGCAACCTCA 57.367 29.630 0.00 0.00 37.44 3.86
1821 2547 9.632807 TGTATTAATTTTATTGTGTGCAACCTC 57.367 29.630 0.00 0.00 37.44 3.85
1822 2548 9.418045 GTGTATTAATTTTATTGTGTGCAACCT 57.582 29.630 0.00 0.00 37.44 3.50
1823 2549 8.652463 GGTGTATTAATTTTATTGTGTGCAACC 58.348 33.333 0.00 0.00 37.44 3.77
1826 2552 7.896811 TGGGTGTATTAATTTTATTGTGTGCA 58.103 30.769 0.00 0.00 0.00 4.57
1843 2569 2.091541 CGGCATGACTTTTGGGTGTAT 58.908 47.619 0.00 0.00 0.00 2.29
1866 2611 3.366724 TGCGTTATTGTGTCGTTGATCTC 59.633 43.478 0.00 0.00 0.00 2.75
1872 2617 1.222300 TGCTGCGTTATTGTGTCGTT 58.778 45.000 0.00 0.00 0.00 3.85
1878 2623 4.775058 TTAATGGTTGCTGCGTTATTGT 57.225 36.364 0.00 0.00 0.00 2.71
1883 2628 5.105957 TGTTGATATTAATGGTTGCTGCGTT 60.106 36.000 0.00 0.00 0.00 4.84
1884 2629 4.397730 TGTTGATATTAATGGTTGCTGCGT 59.602 37.500 0.00 0.00 0.00 5.24
1885 2630 4.734854 GTGTTGATATTAATGGTTGCTGCG 59.265 41.667 0.00 0.00 0.00 5.18
1889 2634 5.348164 GGTGGTGTTGATATTAATGGTTGC 58.652 41.667 0.00 0.00 0.00 4.17
1913 2658 0.997196 GAGACGACCGTTATGCCAAC 59.003 55.000 0.00 0.00 0.00 3.77
1916 2661 2.357009 TCTTAGAGACGACCGTTATGCC 59.643 50.000 0.00 0.00 0.00 4.40
1919 2664 3.631227 CCCTTCTTAGAGACGACCGTTAT 59.369 47.826 0.00 0.00 0.00 1.89
1921 2666 1.817447 CCCTTCTTAGAGACGACCGTT 59.183 52.381 0.00 0.00 0.00 4.44
1924 2669 3.762823 TCTTTCCCTTCTTAGAGACGACC 59.237 47.826 0.00 0.00 0.00 4.79
1925 2670 5.344884 CATCTTTCCCTTCTTAGAGACGAC 58.655 45.833 0.00 0.00 0.00 4.34
1926 2671 4.142138 GCATCTTTCCCTTCTTAGAGACGA 60.142 45.833 0.00 0.00 0.00 4.20
1927 2672 4.116238 GCATCTTTCCCTTCTTAGAGACG 58.884 47.826 0.00 0.00 0.00 4.18
1928 2673 4.873259 GTGCATCTTTCCCTTCTTAGAGAC 59.127 45.833 0.00 0.00 0.00 3.36
1929 2674 4.382040 CGTGCATCTTTCCCTTCTTAGAGA 60.382 45.833 0.00 0.00 0.00 3.10
1930 2675 3.868077 CGTGCATCTTTCCCTTCTTAGAG 59.132 47.826 0.00 0.00 0.00 2.43
1931 2676 3.513912 TCGTGCATCTTTCCCTTCTTAGA 59.486 43.478 0.00 0.00 0.00 2.10
1932 2677 3.861840 TCGTGCATCTTTCCCTTCTTAG 58.138 45.455 0.00 0.00 0.00 2.18
1940 2704 0.810648 TGGCATTCGTGCATCTTTCC 59.189 50.000 2.61 0.00 36.33 3.13
1945 2709 0.457035 AATGGTGGCATTCGTGCATC 59.543 50.000 2.61 0.00 36.33 3.91
1947 2711 1.585517 CAATGGTGGCATTCGTGCA 59.414 52.632 2.61 0.00 36.33 4.57
1952 2716 1.068127 GGATCTGCAATGGTGGCATTC 59.932 52.381 0.00 0.00 41.06 2.67
1955 2719 0.251698 TTGGATCTGCAATGGTGGCA 60.252 50.000 0.00 0.00 39.32 4.92
1959 2723 2.104967 CATGGTTGGATCTGCAATGGT 58.895 47.619 0.00 0.00 0.00 3.55
1960 2724 1.202486 GCATGGTTGGATCTGCAATGG 60.202 52.381 0.00 0.00 34.77 3.16
1962 2726 1.754803 CTGCATGGTTGGATCTGCAAT 59.245 47.619 6.53 0.00 43.42 3.56
1965 2729 0.737219 GTCTGCATGGTTGGATCTGC 59.263 55.000 0.00 0.00 35.21 4.26
1966 2730 2.414994 AGTCTGCATGGTTGGATCTG 57.585 50.000 0.00 0.00 0.00 2.90
1980 2744 6.035435 CGAGTGAAAATCCACAATCTAGTCTG 59.965 42.308 0.00 0.00 39.42 3.51
1982 2746 5.292101 CCGAGTGAAAATCCACAATCTAGTC 59.708 44.000 0.00 0.00 39.42 2.59
1990 2754 3.260632 TCTCATCCGAGTGAAAATCCACA 59.739 43.478 0.00 0.00 40.44 4.17
1991 2755 3.861840 TCTCATCCGAGTGAAAATCCAC 58.138 45.455 0.00 0.00 40.44 4.02
1993 2757 6.094048 TGAATTTCTCATCCGAGTGAAAATCC 59.906 38.462 0.00 2.65 40.44 3.01
1995 2759 7.452880 TTGAATTTCTCATCCGAGTGAAAAT 57.547 32.000 0.00 0.00 40.44 1.82
2003 2767 5.188434 AGATTGCTTGAATTTCTCATCCGA 58.812 37.500 0.00 0.00 32.78 4.55
2006 2770 7.275123 GTCCAAAGATTGCTTGAATTTCTCATC 59.725 37.037 0.00 0.00 33.79 2.92
2008 2772 6.040729 TGTCCAAAGATTGCTTGAATTTCTCA 59.959 34.615 0.00 0.00 33.79 3.27
2017 2781 5.130292 AGACATTGTCCAAAGATTGCTTG 57.870 39.130 13.14 0.00 31.43 4.01
2018 2782 5.302568 TGAAGACATTGTCCAAAGATTGCTT 59.697 36.000 13.14 0.00 32.00 3.91
2027 2792 2.886523 CCTTGCTGAAGACATTGTCCAA 59.113 45.455 13.14 8.78 32.18 3.53
2030 2795 4.540824 GTTTCCTTGCTGAAGACATTGTC 58.459 43.478 8.82 8.82 0.00 3.18
2043 2808 1.068541 GGTTCCATGTCGTTTCCTTGC 60.069 52.381 0.00 0.00 0.00 4.01
2048 2813 1.463444 CGAAGGGTTCCATGTCGTTTC 59.537 52.381 0.00 0.00 0.00 2.78
2049 2814 1.519408 CGAAGGGTTCCATGTCGTTT 58.481 50.000 0.00 0.00 0.00 3.60
2052 2817 1.361668 CTGCGAAGGGTTCCATGTCG 61.362 60.000 0.00 0.00 34.89 4.35
2055 2820 1.338674 TGTACTGCGAAGGGTTCCATG 60.339 52.381 0.00 0.00 0.00 3.66
2056 2821 0.981183 TGTACTGCGAAGGGTTCCAT 59.019 50.000 0.00 0.00 0.00 3.41
2062 2827 3.270027 TCATTGATTGTACTGCGAAGGG 58.730 45.455 0.00 0.00 0.00 3.95
2064 2829 5.784750 TCTTCATTGATTGTACTGCGAAG 57.215 39.130 0.00 0.00 0.00 3.79
2065 2830 7.763985 TCTTATCTTCATTGATTGTACTGCGAA 59.236 33.333 0.00 0.00 0.00 4.70
2066 2831 7.222805 GTCTTATCTTCATTGATTGTACTGCGA 59.777 37.037 0.00 0.00 0.00 5.10
2069 2834 9.591792 TGAGTCTTATCTTCATTGATTGTACTG 57.408 33.333 0.00 0.00 0.00 2.74
2088 2855 9.566432 AATTCAGAGTGAAAACTATTGAGTCTT 57.434 29.630 0.00 0.00 40.12 3.01
2096 2863 7.663081 TGCTCTCAAATTCAGAGTGAAAACTAT 59.337 33.333 13.38 0.00 40.12 2.12
2097 2864 6.992123 TGCTCTCAAATTCAGAGTGAAAACTA 59.008 34.615 13.38 0.00 40.12 2.24
2109 2876 8.514594 CCTTTTAAGTACATGCTCTCAAATTCA 58.485 33.333 0.00 0.00 0.00 2.57
2115 2883 4.695455 GTGCCTTTTAAGTACATGCTCTCA 59.305 41.667 0.00 0.00 0.00 3.27
2126 2894 3.964031 TGGTTTGATGGTGCCTTTTAAGT 59.036 39.130 0.00 0.00 0.00 2.24
2129 2897 3.068873 GTGTGGTTTGATGGTGCCTTTTA 59.931 43.478 0.00 0.00 0.00 1.52
2141 2909 1.469308 GGTTGTCGTTGTGTGGTTTGA 59.531 47.619 0.00 0.00 0.00 2.69
2142 2910 1.792273 CGGTTGTCGTTGTGTGGTTTG 60.792 52.381 0.00 0.00 0.00 2.93
2147 2915 1.275657 GAGCGGTTGTCGTTGTGTG 59.724 57.895 0.00 0.00 41.72 3.82
2148 2916 0.531974 ATGAGCGGTTGTCGTTGTGT 60.532 50.000 0.00 0.00 41.72 3.72
2153 2921 1.796459 GTACAAATGAGCGGTTGTCGT 59.204 47.619 0.00 0.00 38.80 4.34
2157 2925 4.092968 GTCTTAGGTACAAATGAGCGGTTG 59.907 45.833 0.00 0.00 0.00 3.77
2160 2928 3.857052 TGTCTTAGGTACAAATGAGCGG 58.143 45.455 0.00 0.00 0.00 5.52
2169 2937 6.043854 TGTTATGTGCATGTCTTAGGTACA 57.956 37.500 0.00 0.00 39.86 2.90
2171 2939 7.334858 TCATTGTTATGTGCATGTCTTAGGTA 58.665 34.615 0.00 0.00 33.34 3.08
2174 2942 7.279536 AGTCTCATTGTTATGTGCATGTCTTAG 59.720 37.037 0.00 0.00 33.34 2.18
2175 2943 7.064966 CAGTCTCATTGTTATGTGCATGTCTTA 59.935 37.037 0.00 0.00 33.34 2.10
2176 2944 5.942236 AGTCTCATTGTTATGTGCATGTCTT 59.058 36.000 0.00 0.00 33.34 3.01
2177 2945 5.353400 CAGTCTCATTGTTATGTGCATGTCT 59.647 40.000 0.00 0.00 33.34 3.41
2183 2953 5.611796 TGTTCAGTCTCATTGTTATGTGC 57.388 39.130 0.00 0.00 33.34 4.57
2189 2959 9.696917 GGAAATTAAATGTTCAGTCTCATTGTT 57.303 29.630 0.00 0.00 34.98 2.83
2191 2961 9.132521 GTGGAAATTAAATGTTCAGTCTCATTG 57.867 33.333 0.00 0.00 34.98 2.82
2194 2964 7.815840 TGTGGAAATTAAATGTTCAGTCTCA 57.184 32.000 0.00 0.00 0.00 3.27
2195 2965 9.774742 GTATGTGGAAATTAAATGTTCAGTCTC 57.225 33.333 0.00 0.00 0.00 3.36
2196 2966 9.295825 TGTATGTGGAAATTAAATGTTCAGTCT 57.704 29.630 0.00 0.00 0.00 3.24
2200 2970 8.100508 TCGTGTATGTGGAAATTAAATGTTCA 57.899 30.769 0.00 0.00 0.00 3.18
2207 2977 5.553123 ACACCTCGTGTATGTGGAAATTAA 58.447 37.500 0.00 0.00 45.56 1.40
2208 2978 5.155278 ACACCTCGTGTATGTGGAAATTA 57.845 39.130 0.00 0.00 45.56 1.40
2209 2979 4.015872 ACACCTCGTGTATGTGGAAATT 57.984 40.909 0.00 0.00 45.56 1.82
2210 2980 3.695830 ACACCTCGTGTATGTGGAAAT 57.304 42.857 0.00 0.00 45.56 2.17
2211 2981 3.135225 CAACACCTCGTGTATGTGGAAA 58.865 45.455 0.00 0.00 46.79 3.13
2223 2993 3.917329 TTGACTCTACTCAACACCTCG 57.083 47.619 0.00 0.00 0.00 4.63
2227 2997 5.808030 GGCTTCTATTGACTCTACTCAACAC 59.192 44.000 0.00 0.00 32.95 3.32
2231 3001 5.527951 CGTAGGCTTCTATTGACTCTACTCA 59.472 44.000 0.00 0.00 0.00 3.41
2235 3005 4.820716 GGTCGTAGGCTTCTATTGACTCTA 59.179 45.833 0.00 0.00 34.48 2.43
2238 3008 3.362706 TGGTCGTAGGCTTCTATTGACT 58.637 45.455 0.00 0.00 34.48 3.41
2244 3014 5.944599 CCTAATCTATGGTCGTAGGCTTCTA 59.055 44.000 0.00 0.00 0.00 2.10
2252 3022 2.816087 GGCGTCCTAATCTATGGTCGTA 59.184 50.000 0.00 0.00 37.25 3.43
2253 3023 1.612463 GGCGTCCTAATCTATGGTCGT 59.388 52.381 0.00 0.00 37.25 4.34
2271 3041 0.250338 GACCGATAATGGTGGAGGGC 60.250 60.000 0.00 0.00 44.01 5.19
2284 3054 0.032130 CGGGATTCGTGATGACCGAT 59.968 55.000 0.00 0.00 43.69 4.18
2285 3055 1.435925 CGGGATTCGTGATGACCGA 59.564 57.895 0.00 0.00 43.69 4.69
2291 3065 0.828022 TGGTTAGCGGGATTCGTGAT 59.172 50.000 0.00 0.00 41.72 3.06
2317 3091 0.729140 CAACGAATTCGGCCTTGCAC 60.729 55.000 29.79 0.00 44.95 4.57
2320 3094 1.154035 GGCAACGAATTCGGCCTTG 60.154 57.895 29.63 24.74 41.40 3.61
2321 3095 1.175983 TTGGCAACGAATTCGGCCTT 61.176 50.000 33.43 18.94 43.77 4.35
2336 3110 2.993220 CCGTTGAATAAAGGCTTTTGGC 59.007 45.455 18.93 8.10 46.43 4.52
2344 3118 3.056179 ACCAAATGGCCGTTGAATAAAGG 60.056 43.478 11.94 7.46 39.32 3.11
2345 3119 4.186856 ACCAAATGGCCGTTGAATAAAG 57.813 40.909 11.94 0.43 39.32 1.85
2346 3120 4.381079 GCTACCAAATGGCCGTTGAATAAA 60.381 41.667 11.94 0.00 39.32 1.40
2347 3121 3.129638 GCTACCAAATGGCCGTTGAATAA 59.870 43.478 11.94 0.00 39.32 1.40
2348 3122 2.685897 GCTACCAAATGGCCGTTGAATA 59.314 45.455 11.94 6.82 39.32 1.75
2349 3123 1.476488 GCTACCAAATGGCCGTTGAAT 59.524 47.619 11.94 6.03 39.32 2.57
2350 3124 0.885196 GCTACCAAATGGCCGTTGAA 59.115 50.000 11.94 2.78 39.32 2.69
2351 3125 0.963355 GGCTACCAAATGGCCGTTGA 60.963 55.000 11.94 0.00 46.28 3.18
2352 3126 1.510844 GGCTACCAAATGGCCGTTG 59.489 57.895 11.94 11.51 46.28 4.10
2353 3127 4.012138 GGCTACCAAATGGCCGTT 57.988 55.556 3.71 3.71 46.28 4.44
2368 3142 0.183492 TGATGAGTAAGGCATGGGGC 59.817 55.000 0.00 0.00 43.74 5.80
2369 3143 1.492176 AGTGATGAGTAAGGCATGGGG 59.508 52.381 0.00 0.00 0.00 4.96
2370 3144 3.643320 TCTAGTGATGAGTAAGGCATGGG 59.357 47.826 0.00 0.00 0.00 4.00
2371 3145 4.944619 TCTAGTGATGAGTAAGGCATGG 57.055 45.455 0.00 0.00 0.00 3.66
2372 3146 6.154203 TCTTCTAGTGATGAGTAAGGCATG 57.846 41.667 0.00 0.00 0.00 4.06
2373 3147 6.578023 GTTCTTCTAGTGATGAGTAAGGCAT 58.422 40.000 0.00 0.00 0.00 4.40
2374 3148 5.393135 CGTTCTTCTAGTGATGAGTAAGGCA 60.393 44.000 0.00 0.00 0.00 4.75
2375 3149 5.038033 CGTTCTTCTAGTGATGAGTAAGGC 58.962 45.833 0.00 0.00 0.00 4.35
2376 3150 5.038033 GCGTTCTTCTAGTGATGAGTAAGG 58.962 45.833 0.00 0.00 0.00 2.69
2377 3151 5.038033 GGCGTTCTTCTAGTGATGAGTAAG 58.962 45.833 0.00 0.00 0.00 2.34
2378 3152 4.142227 GGGCGTTCTTCTAGTGATGAGTAA 60.142 45.833 0.00 0.00 0.00 2.24
2379 3153 3.380637 GGGCGTTCTTCTAGTGATGAGTA 59.619 47.826 0.00 0.00 0.00 2.59
2380 3154 2.166664 GGGCGTTCTTCTAGTGATGAGT 59.833 50.000 0.00 0.00 0.00 3.41
2381 3155 2.796383 CGGGCGTTCTTCTAGTGATGAG 60.796 54.545 0.00 0.00 0.00 2.90
2382 3156 1.134367 CGGGCGTTCTTCTAGTGATGA 59.866 52.381 0.00 0.00 0.00 2.92
2383 3157 1.135083 ACGGGCGTTCTTCTAGTGATG 60.135 52.381 0.00 0.00 0.00 3.07
2384 3158 1.135083 CACGGGCGTTCTTCTAGTGAT 60.135 52.381 0.00 0.00 0.00 3.06
2385 3159 0.242825 CACGGGCGTTCTTCTAGTGA 59.757 55.000 0.00 0.00 0.00 3.41
2386 3160 1.352156 GCACGGGCGTTCTTCTAGTG 61.352 60.000 0.00 0.00 0.00 2.74
2387 3161 1.080025 GCACGGGCGTTCTTCTAGT 60.080 57.895 0.00 0.00 0.00 2.57
2388 3162 3.782042 GCACGGGCGTTCTTCTAG 58.218 61.111 0.00 0.00 0.00 2.43
2411 3185 2.593436 CTCGTTGCAACCCCCGTT 60.593 61.111 23.42 0.00 0.00 4.44
2412 3186 4.636435 CCTCGTTGCAACCCCCGT 62.636 66.667 23.42 0.00 0.00 5.28
2415 3189 4.966787 TGGCCTCGTTGCAACCCC 62.967 66.667 23.42 17.57 0.00 4.95
2416 3190 3.670377 GTGGCCTCGTTGCAACCC 61.670 66.667 23.42 18.16 0.00 4.11
2417 3191 1.805428 AATGTGGCCTCGTTGCAACC 61.805 55.000 23.42 9.98 34.07 3.77
2418 3192 0.878416 TAATGTGGCCTCGTTGCAAC 59.122 50.000 19.89 19.89 35.65 4.17
2419 3193 1.268352 GTTAATGTGGCCTCGTTGCAA 59.732 47.619 20.11 6.68 0.00 4.08
2420 3194 0.878416 GTTAATGTGGCCTCGTTGCA 59.122 50.000 20.11 6.05 0.00 4.08
2421 3195 1.165270 AGTTAATGTGGCCTCGTTGC 58.835 50.000 20.11 13.21 0.00 4.17
2422 3196 3.915437 AAAGTTAATGTGGCCTCGTTG 57.085 42.857 20.11 0.00 0.00 4.10
2423 3197 4.457949 CCTTAAAGTTAATGTGGCCTCGTT 59.542 41.667 16.09 16.09 0.00 3.85
2424 3198 4.007659 CCTTAAAGTTAATGTGGCCTCGT 58.992 43.478 3.32 0.00 0.00 4.18
2425 3199 3.377172 CCCTTAAAGTTAATGTGGCCTCG 59.623 47.826 3.32 0.00 0.00 4.63
2426 3200 3.130516 GCCCTTAAAGTTAATGTGGCCTC 59.869 47.826 3.32 0.00 31.20 4.70
2427 3201 3.096852 GCCCTTAAAGTTAATGTGGCCT 58.903 45.455 3.32 0.00 31.20 5.19
2428 3202 2.167693 GGCCCTTAAAGTTAATGTGGCC 59.832 50.000 16.24 16.24 40.95 5.36
2429 3203 3.096852 AGGCCCTTAAAGTTAATGTGGC 58.903 45.455 0.00 9.16 34.04 5.01
2430 3204 4.600062 AGAGGCCCTTAAAGTTAATGTGG 58.400 43.478 0.00 0.00 0.00 4.17
2431 3205 6.208599 TCAAAGAGGCCCTTAAAGTTAATGTG 59.791 38.462 0.00 0.00 34.00 3.21
2432 3206 6.311735 TCAAAGAGGCCCTTAAAGTTAATGT 58.688 36.000 0.00 0.00 34.00 2.71
2433 3207 6.834168 TCAAAGAGGCCCTTAAAGTTAATG 57.166 37.500 0.00 0.00 34.00 1.90
2434 3208 7.673926 TGAATCAAAGAGGCCCTTAAAGTTAAT 59.326 33.333 0.00 0.00 34.00 1.40
2435 3209 7.007723 TGAATCAAAGAGGCCCTTAAAGTTAA 58.992 34.615 0.00 0.00 34.00 2.01
2436 3210 6.548321 TGAATCAAAGAGGCCCTTAAAGTTA 58.452 36.000 0.00 0.00 34.00 2.24
2437 3211 5.393866 TGAATCAAAGAGGCCCTTAAAGTT 58.606 37.500 0.00 0.00 34.00 2.66
2438 3212 4.998051 TGAATCAAAGAGGCCCTTAAAGT 58.002 39.130 0.00 0.00 34.00 2.66
2439 3213 5.982890 TTGAATCAAAGAGGCCCTTAAAG 57.017 39.130 0.00 0.00 34.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.