Multiple sequence alignment - TraesCS7B01G071600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G071600 chr7B 100.000 2723 0 0 1 2723 79050232 79052954 0.000000e+00 5029
1 TraesCS7B01G071600 chr7A 88.870 1806 124 35 551 2317 122207006 122208773 0.000000e+00 2150
2 TraesCS7B01G071600 chr7D 87.715 1571 105 29 700 2256 117791656 117793152 0.000000e+00 1751
3 TraesCS7B01G071600 chr7D 77.612 603 57 40 36 600 117789027 117789589 7.370000e-76 294
4 TraesCS7B01G071600 chr6B 84.492 187 25 3 1180 1362 637862095 637861909 5.990000e-42 182
5 TraesCS7B01G071600 chr6D 84.358 179 25 2 1187 1362 423171111 423171289 3.600000e-39 172
6 TraesCS7B01G071600 chr5B 97.917 96 2 0 1196 1291 406876411 406876506 1.680000e-37 167
7 TraesCS7B01G071600 chr5D 96.907 97 3 0 1195 1291 344885063 344884967 2.170000e-36 163
8 TraesCS7B01G071600 chr5A 96.907 97 3 0 1195 1291 447305063 447305159 2.170000e-36 163
9 TraesCS7B01G071600 chr6A 94.231 104 6 0 1187 1290 566430405 566430302 2.810000e-35 159
10 TraesCS7B01G071600 chr4A 90.722 97 9 0 1195 1291 80857410 80857314 2.200000e-26 130


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G071600 chr7B 79050232 79052954 2722 False 5029.0 5029 100.0000 1 2723 1 chr7B.!!$F1 2722
1 TraesCS7B01G071600 chr7A 122207006 122208773 1767 False 2150.0 2150 88.8700 551 2317 1 chr7A.!!$F1 1766
2 TraesCS7B01G071600 chr7D 117789027 117793152 4125 False 1022.5 1751 82.6635 36 2256 2 chr7D.!!$F1 2220

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
114 119 0.107456 AGCTATCCGTTCCATGGCAG 59.893 55.0 6.96 0.0 30.37 4.85 F
194 200 0.251916 CCCAAGTCGGCAAGTCCATA 59.748 55.0 0.00 0.0 34.01 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1579 3627 0.331278 TTGTGCCCATCCTTACCAGG 59.669 55.0 0.0 0.0 42.50 4.45 R
1821 3872 0.596082 AAACAAATGAACGCCCTCGG 59.404 50.0 0.0 0.0 40.69 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.796667 GAGTGTCGTTGAGAGGACC 57.203 57.895 0.00 0.00 39.36 4.46
19 20 0.244178 GAGTGTCGTTGAGAGGACCC 59.756 60.000 0.00 0.00 39.36 4.46
20 21 1.080705 GTGTCGTTGAGAGGACCCG 60.081 63.158 0.00 0.00 39.36 5.28
21 22 2.126031 GTCGTTGAGAGGACCCGC 60.126 66.667 0.00 0.00 35.23 6.13
22 23 3.379445 TCGTTGAGAGGACCCGCC 61.379 66.667 0.00 0.00 0.00 6.13
23 24 4.452733 CGTTGAGAGGACCCGCCC 62.453 72.222 0.00 0.00 37.37 6.13
24 25 4.452733 GTTGAGAGGACCCGCCCG 62.453 72.222 0.00 0.00 37.37 6.13
33 34 3.326900 ACCCGCCCGGTTAATCAT 58.673 55.556 0.00 0.00 45.36 2.45
34 35 1.153046 ACCCGCCCGGTTAATCATG 60.153 57.895 0.00 0.00 45.36 3.07
35 36 2.551912 CCCGCCCGGTTAATCATGC 61.552 63.158 0.00 0.00 0.00 4.06
36 37 2.551912 CCGCCCGGTTAATCATGCC 61.552 63.158 0.00 0.00 0.00 4.40
37 38 2.892334 CGCCCGGTTAATCATGCCG 61.892 63.158 0.00 2.08 44.55 5.69
54 55 1.337821 CCGAAGTCCGAGAAAAGTCG 58.662 55.000 0.00 0.00 41.76 4.18
65 66 3.123621 CGAGAAAAGTCGTGGAATGGAAG 59.876 47.826 0.00 0.00 35.14 3.46
66 67 2.814336 AGAAAAGTCGTGGAATGGAAGC 59.186 45.455 0.00 0.00 0.00 3.86
103 108 1.855360 GCGAGAAAGACAAGCTATCCG 59.145 52.381 0.00 0.00 0.00 4.18
105 110 3.512680 CGAGAAAGACAAGCTATCCGTT 58.487 45.455 0.00 0.00 0.00 4.44
106 111 3.548268 CGAGAAAGACAAGCTATCCGTTC 59.452 47.826 0.00 0.00 0.00 3.95
111 116 2.158900 AGACAAGCTATCCGTTCCATGG 60.159 50.000 4.97 4.97 0.00 3.66
112 117 0.947244 CAAGCTATCCGTTCCATGGC 59.053 55.000 6.96 0.00 0.00 4.40
114 119 0.107456 AGCTATCCGTTCCATGGCAG 59.893 55.000 6.96 0.00 30.37 4.85
115 120 0.886490 GCTATCCGTTCCATGGCAGG 60.886 60.000 6.96 10.20 0.00 4.85
116 121 0.886490 CTATCCGTTCCATGGCAGGC 60.886 60.000 6.96 0.00 0.00 4.85
117 122 1.631071 TATCCGTTCCATGGCAGGCA 61.631 55.000 6.96 0.00 0.00 4.75
118 123 2.288642 ATCCGTTCCATGGCAGGCAT 62.289 55.000 6.96 2.93 0.00 4.40
136 141 1.534336 ATGCATGGACGGCAAAGCAA 61.534 50.000 0.00 0.00 45.60 3.91
151 157 2.481919 CAATGCATGCAGACGCGT 59.518 55.556 26.69 13.85 42.97 6.01
161 167 1.065928 CAGACGCGTAGATCCCACC 59.934 63.158 13.97 0.00 0.00 4.61
163 169 2.363276 ACGCGTAGATCCCACCCA 60.363 61.111 11.67 0.00 0.00 4.51
164 170 2.351336 GACGCGTAGATCCCACCCAG 62.351 65.000 13.97 0.00 0.00 4.45
186 192 4.947147 GGCACACCCAAGTCGGCA 62.947 66.667 0.00 0.00 0.00 5.69
187 193 2.904866 GCACACCCAAGTCGGCAA 60.905 61.111 0.00 0.00 0.00 4.52
188 194 2.908073 GCACACCCAAGTCGGCAAG 61.908 63.158 0.00 0.00 0.00 4.01
189 195 1.525995 CACACCCAAGTCGGCAAGT 60.526 57.895 0.00 0.00 0.00 3.16
190 196 1.227853 ACACCCAAGTCGGCAAGTC 60.228 57.895 0.00 0.00 0.00 3.01
191 197 1.966451 CACCCAAGTCGGCAAGTCC 60.966 63.158 0.00 0.00 0.00 3.85
192 198 2.429930 CCCAAGTCGGCAAGTCCA 59.570 61.111 0.00 0.00 34.01 4.02
193 199 1.002134 CCCAAGTCGGCAAGTCCAT 60.002 57.895 0.00 0.00 34.01 3.41
194 200 0.251916 CCCAAGTCGGCAAGTCCATA 59.748 55.000 0.00 0.00 34.01 2.74
195 201 1.339631 CCCAAGTCGGCAAGTCCATAA 60.340 52.381 0.00 0.00 34.01 1.90
196 202 2.643551 CCAAGTCGGCAAGTCCATAAT 58.356 47.619 0.00 0.00 34.01 1.28
197 203 2.614057 CCAAGTCGGCAAGTCCATAATC 59.386 50.000 0.00 0.00 34.01 1.75
198 204 3.270027 CAAGTCGGCAAGTCCATAATCA 58.730 45.455 0.00 0.00 34.01 2.57
199 205 3.845781 AGTCGGCAAGTCCATAATCAT 57.154 42.857 0.00 0.00 34.01 2.45
200 206 3.470709 AGTCGGCAAGTCCATAATCATG 58.529 45.455 0.00 0.00 34.01 3.07
201 207 2.031682 GTCGGCAAGTCCATAATCATGC 60.032 50.000 0.00 0.00 34.01 4.06
220 226 4.214986 TGCCGAAAACCTAGATTGATGA 57.785 40.909 0.00 0.00 0.00 2.92
227 233 6.292381 CGAAAACCTAGATTGATGATCGTTCC 60.292 42.308 0.00 0.00 39.85 3.62
236 242 4.385358 TGATGATCGTTCCGAATTCAGA 57.615 40.909 6.22 0.00 39.99 3.27
238 244 3.165058 TGATCGTTCCGAATTCAGAGG 57.835 47.619 6.22 0.00 39.99 3.69
240 246 1.263356 TCGTTCCGAATTCAGAGGGT 58.737 50.000 6.22 0.00 31.06 4.34
241 247 2.449464 TCGTTCCGAATTCAGAGGGTA 58.551 47.619 6.22 0.00 31.06 3.69
242 248 2.827322 TCGTTCCGAATTCAGAGGGTAA 59.173 45.455 6.22 0.00 31.06 2.85
243 249 3.258872 TCGTTCCGAATTCAGAGGGTAAA 59.741 43.478 6.22 0.00 31.06 2.01
244 250 3.617263 CGTTCCGAATTCAGAGGGTAAAG 59.383 47.826 6.22 0.00 0.00 1.85
245 251 4.576879 GTTCCGAATTCAGAGGGTAAAGT 58.423 43.478 6.22 0.00 0.00 2.66
301 308 1.379443 CATGCATGCAGGGTCCAGT 60.379 57.895 26.69 3.09 0.00 4.00
339 358 4.171416 GCGGCTGCAAGTGCTAGC 62.171 66.667 14.08 8.10 42.66 3.42
367 386 3.488978 CCGCGTCTCGTCTCGTCT 61.489 66.667 4.92 0.00 36.19 4.18
369 388 2.400402 GCGTCTCGTCTCGTCTCC 59.600 66.667 0.00 0.00 0.00 3.71
370 389 3.091529 CGTCTCGTCTCGTCTCCC 58.908 66.667 0.00 0.00 0.00 4.30
456 478 2.910479 CTGCGCCCATCCATGCAT 60.910 61.111 4.18 0.00 36.64 3.96
457 479 3.207547 CTGCGCCCATCCATGCATG 62.208 63.158 20.19 20.19 36.64 4.06
479 501 2.019249 GTCACCATAGTGCATGCATGT 58.981 47.619 25.64 16.79 44.16 3.21
480 502 2.424601 GTCACCATAGTGCATGCATGTT 59.575 45.455 25.64 14.95 44.16 2.71
481 503 2.684374 TCACCATAGTGCATGCATGTTC 59.316 45.455 25.64 19.05 44.16 3.18
489 526 1.581912 CATGCATGTTCGAGCACGC 60.582 57.895 18.91 13.58 44.49 5.34
506 543 2.713927 CGCAGTACGGTCTTAATTGC 57.286 50.000 0.00 0.00 38.44 3.56
509 546 2.943033 GCAGTACGGTCTTAATTGCCAT 59.057 45.455 0.00 0.00 0.00 4.40
518 555 6.071391 ACGGTCTTAATTGCCATTCAGAAATT 60.071 34.615 0.00 0.00 26.72 1.82
523 560 8.253113 TCTTAATTGCCATTCAGAAATTTCTCC 58.747 33.333 17.91 3.72 34.74 3.71
526 568 7.909485 ATTGCCATTCAGAAATTTCTCCTAT 57.091 32.000 17.91 8.70 34.74 2.57
531 573 3.808728 TCAGAAATTTCTCCTATGCCGG 58.191 45.455 17.91 0.00 34.74 6.13
541 583 1.771854 TCCTATGCCGGGCTTGAAATA 59.228 47.619 21.46 8.13 0.00 1.40
543 585 3.157087 CCTATGCCGGGCTTGAAATATT 58.843 45.455 21.46 0.00 0.00 1.28
548 590 3.957497 TGCCGGGCTTGAAATATTAACAT 59.043 39.130 21.46 0.00 0.00 2.71
552 594 5.335661 CCGGGCTTGAAATATTAACATAGGC 60.336 44.000 0.00 14.54 0.00 3.93
577 619 0.598065 GTGACTTTTGGCAGCGGATT 59.402 50.000 0.00 0.00 38.72 3.01
591 633 0.304705 CGGATTGCACGAACATAGCC 59.695 55.000 0.00 0.00 0.00 3.93
600 642 1.488812 ACGAACATAGCCCCTAATGCA 59.511 47.619 0.00 0.00 0.00 3.96
601 643 1.873591 CGAACATAGCCCCTAATGCAC 59.126 52.381 0.00 0.00 0.00 4.57
602 644 2.230660 GAACATAGCCCCTAATGCACC 58.769 52.381 0.00 0.00 0.00 5.01
603 645 0.478507 ACATAGCCCCTAATGCACCC 59.521 55.000 0.00 0.00 0.00 4.61
604 646 0.773644 CATAGCCCCTAATGCACCCT 59.226 55.000 0.00 0.00 0.00 4.34
605 647 0.773644 ATAGCCCCTAATGCACCCTG 59.226 55.000 0.00 0.00 0.00 4.45
606 648 1.994885 TAGCCCCTAATGCACCCTGC 61.995 60.000 0.00 0.00 45.29 4.85
624 666 2.434843 CGGCCCTGCACTATCCTCA 61.435 63.158 0.00 0.00 0.00 3.86
630 672 3.244700 GCCCTGCACTATCCTCATACATT 60.245 47.826 0.00 0.00 0.00 2.71
631 673 4.321718 CCCTGCACTATCCTCATACATTG 58.678 47.826 0.00 0.00 0.00 2.82
759 2790 0.997196 GTACACTGCCGATCGGTTTC 59.003 55.000 33.33 18.59 37.65 2.78
760 2791 0.892755 TACACTGCCGATCGGTTTCT 59.107 50.000 33.33 15.68 37.65 2.52
764 2795 1.970917 CTGCCGATCGGTTTCTGTGC 61.971 60.000 33.33 17.59 37.65 4.57
795 2826 0.824759 GGGTGACGAGATGGTTAGCT 59.175 55.000 0.00 0.00 0.00 3.32
805 2836 4.272018 CGAGATGGTTAGCTTTCAATGAGG 59.728 45.833 0.00 0.00 0.00 3.86
912 2948 2.423577 GTCTCACCATAAAACCACGCT 58.576 47.619 0.00 0.00 0.00 5.07
1045 3084 3.069318 GGGGAGCCGACTCGTTCT 61.069 66.667 0.00 0.00 44.48 3.01
1047 3086 2.490685 GGAGCCGACTCGTTCTCC 59.509 66.667 16.49 16.49 44.48 3.71
1374 3416 4.547367 GCCCTGTTCGGCGGCTAT 62.547 66.667 7.21 0.00 39.64 2.97
1376 3418 2.499205 CCTGTTCGGCGGCTATGA 59.501 61.111 7.21 0.00 0.00 2.15
1618 3666 2.815211 CGGTGATGAGCGTGGTGG 60.815 66.667 0.00 0.00 38.30 4.61
1716 3764 2.548067 CGTTGTAAGCTTGGACCTCTGT 60.548 50.000 9.86 0.00 0.00 3.41
1724 3772 2.300437 GCTTGGACCTCTGTCTGTAGTT 59.700 50.000 0.00 0.00 41.47 2.24
1735 3786 5.534407 TCTGTCTGTAGTTCGTTGCAATTA 58.466 37.500 0.59 0.00 0.00 1.40
1736 3787 5.404366 TCTGTCTGTAGTTCGTTGCAATTAC 59.596 40.000 0.59 1.24 0.00 1.89
1737 3788 5.294356 TGTCTGTAGTTCGTTGCAATTACT 58.706 37.500 0.59 9.18 0.00 2.24
1751 3802 4.159693 TGCAATTACTGTCGATCTAGGTGT 59.840 41.667 0.00 0.00 0.00 4.16
1754 3805 6.198591 GCAATTACTGTCGATCTAGGTGTTAC 59.801 42.308 0.00 0.00 0.00 2.50
1877 3933 6.814043 TGCATATTAAGTTGGCATGCATTTA 58.186 32.000 21.36 8.94 45.09 1.40
1878 3934 7.270779 TGCATATTAAGTTGGCATGCATTTAA 58.729 30.769 21.36 16.53 45.09 1.52
1879 3935 7.932491 TGCATATTAAGTTGGCATGCATTTAAT 59.068 29.630 21.36 21.17 45.09 1.40
1880 3936 8.776470 GCATATTAAGTTGGCATGCATTTAATT 58.224 29.630 21.36 8.99 41.25 1.40
1892 3948 8.614346 GGCATGCATTTAATTTGAATAATGTGT 58.386 29.630 21.36 0.00 32.10 3.72
1917 3973 7.176589 ACTCCTACTACTTCTCTCCATTTTG 57.823 40.000 0.00 0.00 0.00 2.44
1949 4005 1.863454 CATGAGCGATTCAGTGCCTAC 59.137 52.381 0.00 0.00 39.68 3.18
1987 4043 7.473366 CGTTAGCAAGTCTAGTTCTAGATGAA 58.527 38.462 11.89 0.00 0.00 2.57
2106 4164 8.597227 ACAATCATGATTATGCAATTGAAAACG 58.403 29.630 20.32 5.34 34.54 3.60
2129 4190 8.008513 ACGGTATTATTCAAGACAGTGACTAT 57.991 34.615 0.00 0.00 33.83 2.12
2153 4214 4.083802 GGTTCAGTCGACTTGGAATTTCTG 60.084 45.833 17.26 1.18 0.00 3.02
2154 4215 4.600692 TCAGTCGACTTGGAATTTCTGA 57.399 40.909 17.26 3.89 0.00 3.27
2241 4303 6.693315 TCTCACCTGTTGGAAAAAGTTTAG 57.307 37.500 0.00 0.00 37.04 1.85
2244 4306 5.067283 TCACCTGTTGGAAAAAGTTTAGAGC 59.933 40.000 0.00 0.00 37.04 4.09
2248 4310 1.883926 TGGAAAAAGTTTAGAGCCGGC 59.116 47.619 21.89 21.89 0.00 6.13
2258 4320 2.261430 TAGAGCCGGCCTAGTCGTCA 62.261 60.000 26.15 2.03 0.00 4.35
2259 4321 2.678934 AGCCGGCCTAGTCGTCAA 60.679 61.111 26.15 0.00 0.00 3.18
2260 4322 2.221906 GAGCCGGCCTAGTCGTCAAA 62.222 60.000 26.15 0.00 0.00 2.69
2261 4323 2.098831 GCCGGCCTAGTCGTCAAAC 61.099 63.158 18.11 0.00 0.00 2.93
2262 4324 1.804326 CCGGCCTAGTCGTCAAACG 60.804 63.158 0.00 0.00 44.19 3.60
2264 4326 1.588082 GGCCTAGTCGTCAAACGGA 59.412 57.895 0.00 0.00 42.81 4.69
2266 4328 1.347320 GCCTAGTCGTCAAACGGAAG 58.653 55.000 0.00 0.00 42.81 3.46
2267 4329 1.347320 CCTAGTCGTCAAACGGAAGC 58.653 55.000 0.00 0.00 42.81 3.86
2268 4330 0.982673 CTAGTCGTCAAACGGAAGCG 59.017 55.000 0.00 0.00 42.81 4.68
2269 4331 1.005294 TAGTCGTCAAACGGAAGCGC 61.005 55.000 0.00 0.00 42.81 5.92
2301 4373 2.863401 TACGCGATTGTCATAGCACT 57.137 45.000 15.93 0.00 30.67 4.40
2320 4392 4.264460 ACTGATCAAGTGACAGAGGAAC 57.736 45.455 14.02 0.00 37.88 3.62
2321 4393 3.900601 ACTGATCAAGTGACAGAGGAACT 59.099 43.478 14.02 0.00 39.07 3.01
2322 4394 4.262377 ACTGATCAAGTGACAGAGGAACTG 60.262 45.833 14.02 0.00 44.20 3.16
2323 4395 7.754111 ACTGATCAAGTGACAGAGGAACTGC 62.754 48.000 14.02 0.00 43.24 4.40
2347 4419 4.324991 GGCTGGGTTCCCGTCGTT 62.325 66.667 3.27 0.00 0.00 3.85
2348 4420 3.047877 GCTGGGTTCCCGTCGTTG 61.048 66.667 3.27 0.00 0.00 4.10
2349 4421 2.424302 CTGGGTTCCCGTCGTTGT 59.576 61.111 3.27 0.00 0.00 3.32
2350 4422 1.959226 CTGGGTTCCCGTCGTTGTG 60.959 63.158 3.27 0.00 0.00 3.33
2351 4423 2.372040 CTGGGTTCCCGTCGTTGTGA 62.372 60.000 3.27 0.00 0.00 3.58
2352 4424 1.666872 GGGTTCCCGTCGTTGTGAG 60.667 63.158 0.00 0.00 0.00 3.51
2353 4425 1.666872 GGTTCCCGTCGTTGTGAGG 60.667 63.158 0.00 0.00 0.00 3.86
2354 4426 1.068585 GTTCCCGTCGTTGTGAGGT 59.931 57.895 0.00 0.00 0.00 3.85
2355 4427 1.068417 TTCCCGTCGTTGTGAGGTG 59.932 57.895 0.00 0.00 0.00 4.00
2356 4428 1.678598 TTCCCGTCGTTGTGAGGTGT 61.679 55.000 0.00 0.00 0.00 4.16
2357 4429 1.954146 CCCGTCGTTGTGAGGTGTG 60.954 63.158 0.00 0.00 0.00 3.82
2358 4430 1.066752 CCGTCGTTGTGAGGTGTGA 59.933 57.895 0.00 0.00 0.00 3.58
2359 4431 0.528901 CCGTCGTTGTGAGGTGTGAA 60.529 55.000 0.00 0.00 0.00 3.18
2360 4432 0.852777 CGTCGTTGTGAGGTGTGAAG 59.147 55.000 0.00 0.00 0.00 3.02
2361 4433 1.801395 CGTCGTTGTGAGGTGTGAAGT 60.801 52.381 0.00 0.00 0.00 3.01
2362 4434 1.859080 GTCGTTGTGAGGTGTGAAGTC 59.141 52.381 0.00 0.00 0.00 3.01
2363 4435 0.852777 CGTTGTGAGGTGTGAAGTCG 59.147 55.000 0.00 0.00 0.00 4.18
2364 4436 1.801395 CGTTGTGAGGTGTGAAGTCGT 60.801 52.381 0.00 0.00 0.00 4.34
2365 4437 1.859080 GTTGTGAGGTGTGAAGTCGTC 59.141 52.381 0.00 0.00 0.00 4.20
2366 4438 0.030235 TGTGAGGTGTGAAGTCGTCG 59.970 55.000 0.00 0.00 0.00 5.12
2367 4439 1.007734 TGAGGTGTGAAGTCGTCGC 60.008 57.895 0.00 0.00 37.26 5.19
2368 4440 1.733399 GAGGTGTGAAGTCGTCGCC 60.733 63.158 0.00 0.00 35.76 5.54
2369 4441 2.737376 GGTGTGAAGTCGTCGCCC 60.737 66.667 0.00 0.00 35.76 6.13
2370 4442 2.737376 GTGTGAAGTCGTCGCCCC 60.737 66.667 0.00 0.00 35.76 5.80
2371 4443 2.915659 TGTGAAGTCGTCGCCCCT 60.916 61.111 0.00 0.00 35.76 4.79
2372 4444 1.604308 TGTGAAGTCGTCGCCCCTA 60.604 57.895 0.00 0.00 35.76 3.53
2373 4445 1.153881 GTGAAGTCGTCGCCCCTAC 60.154 63.158 0.00 0.00 0.00 3.18
2374 4446 2.345760 TGAAGTCGTCGCCCCTACC 61.346 63.158 0.00 0.00 0.00 3.18
2375 4447 3.407046 GAAGTCGTCGCCCCTACCG 62.407 68.421 0.00 0.00 0.00 4.02
2384 4456 3.148084 CCCCTACCGGCATCGATT 58.852 61.111 0.00 0.00 39.00 3.34
2385 4457 1.450211 CCCCTACCGGCATCGATTT 59.550 57.895 0.00 0.00 39.00 2.17
2386 4458 0.179029 CCCCTACCGGCATCGATTTT 60.179 55.000 0.00 0.00 39.00 1.82
2387 4459 1.226746 CCCTACCGGCATCGATTTTC 58.773 55.000 0.00 0.00 39.00 2.29
2388 4460 1.474320 CCCTACCGGCATCGATTTTCA 60.474 52.381 0.00 0.00 39.00 2.69
2389 4461 1.597663 CCTACCGGCATCGATTTTCAC 59.402 52.381 0.00 0.00 39.00 3.18
2390 4462 1.597663 CTACCGGCATCGATTTTCACC 59.402 52.381 0.00 0.00 39.00 4.02
2391 4463 1.351707 CCGGCATCGATTTTCACCG 59.648 57.895 0.00 4.42 40.30 4.94
2392 4464 1.351707 CGGCATCGATTTTCACCGG 59.648 57.895 0.00 0.00 39.00 5.28
2393 4465 1.727467 GGCATCGATTTTCACCGGG 59.273 57.895 6.32 0.00 0.00 5.73
2394 4466 1.064134 GCATCGATTTTCACCGGGC 59.936 57.895 6.32 0.00 0.00 6.13
2395 4467 1.653094 GCATCGATTTTCACCGGGCA 61.653 55.000 6.32 0.00 0.00 5.36
2396 4468 1.024271 CATCGATTTTCACCGGGCAT 58.976 50.000 6.32 0.00 0.00 4.40
2397 4469 1.024271 ATCGATTTTCACCGGGCATG 58.976 50.000 6.32 0.00 0.00 4.06
2398 4470 0.035915 TCGATTTTCACCGGGCATGA 60.036 50.000 6.32 0.00 0.00 3.07
2399 4471 0.808125 CGATTTTCACCGGGCATGAA 59.192 50.000 6.32 3.77 34.27 2.57
2400 4472 1.467374 CGATTTTCACCGGGCATGAAC 60.467 52.381 6.32 0.00 35.82 3.18
2401 4473 0.894835 ATTTTCACCGGGCATGAACC 59.105 50.000 6.32 0.00 35.82 3.62
2402 4474 0.178975 TTTTCACCGGGCATGAACCT 60.179 50.000 6.32 0.00 35.82 3.50
2403 4475 0.608035 TTTCACCGGGCATGAACCTC 60.608 55.000 6.32 0.00 35.82 3.85
2404 4476 1.773856 TTCACCGGGCATGAACCTCA 61.774 55.000 6.32 0.00 31.11 3.86
2405 4477 1.746615 CACCGGGCATGAACCTCAG 60.747 63.158 6.32 0.00 0.00 3.35
2406 4478 1.918293 ACCGGGCATGAACCTCAGA 60.918 57.895 6.32 0.00 0.00 3.27
2407 4479 1.274703 ACCGGGCATGAACCTCAGAT 61.275 55.000 6.32 0.00 0.00 2.90
2408 4480 0.533755 CCGGGCATGAACCTCAGATC 60.534 60.000 0.00 0.00 0.00 2.75
2409 4481 0.467384 CGGGCATGAACCTCAGATCT 59.533 55.000 0.00 0.00 0.00 2.75
2410 4482 1.539929 CGGGCATGAACCTCAGATCTC 60.540 57.143 0.00 0.00 0.00 2.75
2411 4483 1.202746 GGGCATGAACCTCAGATCTCC 60.203 57.143 0.00 0.00 0.00 3.71
2412 4484 1.487976 GGCATGAACCTCAGATCTCCA 59.512 52.381 0.00 0.00 0.00 3.86
2413 4485 2.106166 GGCATGAACCTCAGATCTCCAT 59.894 50.000 0.00 0.00 0.00 3.41
2414 4486 3.401182 GCATGAACCTCAGATCTCCATC 58.599 50.000 0.00 0.00 0.00 3.51
2415 4487 3.806507 GCATGAACCTCAGATCTCCATCC 60.807 52.174 0.00 0.00 0.00 3.51
2416 4488 3.120468 TGAACCTCAGATCTCCATCCA 57.880 47.619 0.00 0.00 0.00 3.41
2417 4489 3.453868 TGAACCTCAGATCTCCATCCAA 58.546 45.455 0.00 0.00 0.00 3.53
2418 4490 3.845992 TGAACCTCAGATCTCCATCCAAA 59.154 43.478 0.00 0.00 0.00 3.28
2419 4491 3.922171 ACCTCAGATCTCCATCCAAAC 57.078 47.619 0.00 0.00 0.00 2.93
2420 4492 3.184628 ACCTCAGATCTCCATCCAAACA 58.815 45.455 0.00 0.00 0.00 2.83
2421 4493 3.199508 ACCTCAGATCTCCATCCAAACAG 59.800 47.826 0.00 0.00 0.00 3.16
2422 4494 3.204526 CTCAGATCTCCATCCAAACAGC 58.795 50.000 0.00 0.00 0.00 4.40
2423 4495 2.092753 TCAGATCTCCATCCAAACAGCC 60.093 50.000 0.00 0.00 0.00 4.85
2424 4496 2.092538 CAGATCTCCATCCAAACAGCCT 60.093 50.000 0.00 0.00 0.00 4.58
2425 4497 2.172293 AGATCTCCATCCAAACAGCCTC 59.828 50.000 0.00 0.00 0.00 4.70
2426 4498 1.361204 TCTCCATCCAAACAGCCTCA 58.639 50.000 0.00 0.00 0.00 3.86
2427 4499 1.704628 TCTCCATCCAAACAGCCTCAA 59.295 47.619 0.00 0.00 0.00 3.02
2428 4500 2.108075 TCTCCATCCAAACAGCCTCAAA 59.892 45.455 0.00 0.00 0.00 2.69
2429 4501 2.892852 CTCCATCCAAACAGCCTCAAAA 59.107 45.455 0.00 0.00 0.00 2.44
2430 4502 2.627699 TCCATCCAAACAGCCTCAAAAC 59.372 45.455 0.00 0.00 0.00 2.43
2431 4503 2.289010 CCATCCAAACAGCCTCAAAACC 60.289 50.000 0.00 0.00 0.00 3.27
2432 4504 2.452600 TCCAAACAGCCTCAAAACCT 57.547 45.000 0.00 0.00 0.00 3.50
2433 4505 2.306847 TCCAAACAGCCTCAAAACCTC 58.693 47.619 0.00 0.00 0.00 3.85
2434 4506 1.341209 CCAAACAGCCTCAAAACCTCC 59.659 52.381 0.00 0.00 0.00 4.30
2435 4507 1.341209 CAAACAGCCTCAAAACCTCCC 59.659 52.381 0.00 0.00 0.00 4.30
2436 4508 0.537371 AACAGCCTCAAAACCTCCCG 60.537 55.000 0.00 0.00 0.00 5.14
2437 4509 1.073199 CAGCCTCAAAACCTCCCGT 59.927 57.895 0.00 0.00 0.00 5.28
2438 4510 0.323629 CAGCCTCAAAACCTCCCGTA 59.676 55.000 0.00 0.00 0.00 4.02
2439 4511 1.065418 CAGCCTCAAAACCTCCCGTAT 60.065 52.381 0.00 0.00 0.00 3.06
2440 4512 1.065418 AGCCTCAAAACCTCCCGTATG 60.065 52.381 0.00 0.00 0.00 2.39
2441 4513 1.379527 CCTCAAAACCTCCCGTATGC 58.620 55.000 0.00 0.00 0.00 3.14
2442 4514 1.339631 CCTCAAAACCTCCCGTATGCA 60.340 52.381 0.00 0.00 0.00 3.96
2443 4515 2.643551 CTCAAAACCTCCCGTATGCAT 58.356 47.619 3.79 3.79 0.00 3.96
2444 4516 2.614057 CTCAAAACCTCCCGTATGCATC 59.386 50.000 0.19 0.00 0.00 3.91
2445 4517 1.676006 CAAAACCTCCCGTATGCATCC 59.324 52.381 0.19 0.00 0.00 3.51
2446 4518 0.916086 AAACCTCCCGTATGCATCCA 59.084 50.000 0.19 0.00 0.00 3.41
2447 4519 1.140312 AACCTCCCGTATGCATCCAT 58.860 50.000 0.19 0.00 35.44 3.41
2448 4520 0.687354 ACCTCCCGTATGCATCCATC 59.313 55.000 0.19 0.00 32.85 3.51
2449 4521 0.390340 CCTCCCGTATGCATCCATCG 60.390 60.000 0.19 4.52 32.85 3.84
2450 4522 0.603065 CTCCCGTATGCATCCATCGA 59.397 55.000 0.19 0.00 32.85 3.59
2451 4523 1.205655 CTCCCGTATGCATCCATCGAT 59.794 52.381 0.19 0.00 32.85 3.59
2452 4524 1.204704 TCCCGTATGCATCCATCGATC 59.795 52.381 0.19 0.00 32.85 3.69
2453 4525 1.066929 CCCGTATGCATCCATCGATCA 60.067 52.381 0.19 0.00 32.85 2.92
2454 4526 2.612721 CCCGTATGCATCCATCGATCAA 60.613 50.000 0.19 0.00 32.85 2.57
2455 4527 3.264947 CCGTATGCATCCATCGATCAAT 58.735 45.455 0.19 0.00 32.85 2.57
2456 4528 3.308053 CCGTATGCATCCATCGATCAATC 59.692 47.826 0.19 0.00 32.85 2.67
2457 4529 3.928375 CGTATGCATCCATCGATCAATCA 59.072 43.478 0.19 0.00 32.85 2.57
2458 4530 4.569564 CGTATGCATCCATCGATCAATCAT 59.430 41.667 0.19 0.00 32.85 2.45
2459 4531 5.064325 CGTATGCATCCATCGATCAATCATT 59.936 40.000 0.19 0.00 32.85 2.57
2460 4532 5.977489 ATGCATCCATCGATCAATCATTT 57.023 34.783 0.00 0.00 0.00 2.32
2461 4533 5.366829 TGCATCCATCGATCAATCATTTC 57.633 39.130 0.00 0.00 0.00 2.17
2462 4534 4.822896 TGCATCCATCGATCAATCATTTCA 59.177 37.500 0.00 0.00 0.00 2.69
2463 4535 5.475564 TGCATCCATCGATCAATCATTTCAT 59.524 36.000 0.00 0.00 0.00 2.57
2464 4536 6.015772 TGCATCCATCGATCAATCATTTCATT 60.016 34.615 0.00 0.00 0.00 2.57
2465 4537 6.527023 GCATCCATCGATCAATCATTTCATTC 59.473 38.462 0.00 0.00 0.00 2.67
2466 4538 6.564709 TCCATCGATCAATCATTTCATTCC 57.435 37.500 0.00 0.00 0.00 3.01
2467 4539 6.063404 TCCATCGATCAATCATTTCATTCCA 58.937 36.000 0.00 0.00 0.00 3.53
2468 4540 6.206048 TCCATCGATCAATCATTTCATTCCAG 59.794 38.462 0.00 0.00 0.00 3.86
2469 4541 6.206048 CCATCGATCAATCATTTCATTCCAGA 59.794 38.462 0.00 0.00 0.00 3.86
2470 4542 6.856135 TCGATCAATCATTTCATTCCAGAG 57.144 37.500 0.00 0.00 0.00 3.35
2471 4543 6.351711 TCGATCAATCATTTCATTCCAGAGT 58.648 36.000 0.00 0.00 0.00 3.24
2472 4544 6.481313 TCGATCAATCATTTCATTCCAGAGTC 59.519 38.462 0.00 0.00 0.00 3.36
2473 4545 6.293298 CGATCAATCATTTCATTCCAGAGTCC 60.293 42.308 0.00 0.00 0.00 3.85
2474 4546 5.818887 TCAATCATTTCATTCCAGAGTCCA 58.181 37.500 0.00 0.00 0.00 4.02
2475 4547 5.884232 TCAATCATTTCATTCCAGAGTCCAG 59.116 40.000 0.00 0.00 0.00 3.86
2476 4548 5.705397 ATCATTTCATTCCAGAGTCCAGA 57.295 39.130 0.00 0.00 0.00 3.86
2477 4549 4.836825 TCATTTCATTCCAGAGTCCAGAC 58.163 43.478 0.00 0.00 0.00 3.51
2478 4550 3.319137 TTTCATTCCAGAGTCCAGACG 57.681 47.619 0.00 0.00 36.20 4.18
2479 4551 1.186200 TCATTCCAGAGTCCAGACGG 58.814 55.000 0.00 0.00 36.20 4.79
2480 4552 0.460987 CATTCCAGAGTCCAGACGGC 60.461 60.000 0.00 0.00 36.20 5.68
2481 4553 1.949847 ATTCCAGAGTCCAGACGGCG 61.950 60.000 4.80 4.80 36.20 6.46
2482 4554 3.062466 CCAGAGTCCAGACGGCGA 61.062 66.667 16.62 0.00 36.20 5.54
2483 4555 2.487428 CAGAGTCCAGACGGCGAG 59.513 66.667 16.62 2.39 36.20 5.03
2484 4556 3.444805 AGAGTCCAGACGGCGAGC 61.445 66.667 16.62 4.95 36.20 5.03
2485 4557 3.444805 GAGTCCAGACGGCGAGCT 61.445 66.667 16.62 7.67 36.20 4.09
2486 4558 3.404141 GAGTCCAGACGGCGAGCTC 62.404 68.421 16.62 2.73 36.20 4.09
2487 4559 4.838486 GTCCAGACGGCGAGCTCG 62.838 72.222 31.37 31.37 43.27 5.03
2489 4561 3.893763 CCAGACGGCGAGCTCGAT 61.894 66.667 38.74 22.80 43.02 3.59
2490 4562 2.352915 CAGACGGCGAGCTCGATC 60.353 66.667 38.74 28.65 43.02 3.69
2491 4563 3.943034 AGACGGCGAGCTCGATCG 61.943 66.667 38.74 35.91 45.48 3.69
2492 4564 4.965858 GACGGCGAGCTCGATCGG 62.966 72.222 36.35 27.22 42.94 4.18
2497 4569 4.251843 CGAGCTCGATCGGCCGAA 62.252 66.667 34.66 15.73 43.02 4.30
2498 4570 2.104331 GAGCTCGATCGGCCGAAA 59.896 61.111 34.66 19.44 38.17 3.46
2499 4571 1.946650 GAGCTCGATCGGCCGAAAG 60.947 63.158 34.66 27.95 38.17 2.62
2511 4583 3.156334 CGAAAGGAAGGCGACGTG 58.844 61.111 0.00 0.00 0.00 4.49
2512 4584 2.861006 GAAAGGAAGGCGACGTGC 59.139 61.111 0.00 0.00 45.38 5.34
2523 4595 4.367023 GACGTGCGTGCTGGGGTA 62.367 66.667 0.67 0.00 0.00 3.69
2524 4596 3.659089 GACGTGCGTGCTGGGGTAT 62.659 63.158 0.67 0.00 0.00 2.73
2525 4597 2.890474 CGTGCGTGCTGGGGTATC 60.890 66.667 0.00 0.00 0.00 2.24
2526 4598 2.267642 GTGCGTGCTGGGGTATCA 59.732 61.111 0.00 0.00 0.00 2.15
2527 4599 1.153168 GTGCGTGCTGGGGTATCAT 60.153 57.895 0.00 0.00 0.00 2.45
2528 4600 1.146041 TGCGTGCTGGGGTATCATC 59.854 57.895 0.00 0.00 0.00 2.92
2529 4601 1.598130 GCGTGCTGGGGTATCATCC 60.598 63.158 0.00 0.00 0.00 3.51
2530 4602 1.300931 CGTGCTGGGGTATCATCCG 60.301 63.158 0.00 0.00 0.00 4.18
2531 4603 1.830145 GTGCTGGGGTATCATCCGT 59.170 57.895 0.00 0.00 0.00 4.69
2532 4604 1.045407 GTGCTGGGGTATCATCCGTA 58.955 55.000 0.00 0.00 0.00 4.02
2533 4605 1.623811 GTGCTGGGGTATCATCCGTAT 59.376 52.381 0.00 0.00 0.00 3.06
2534 4606 1.899814 TGCTGGGGTATCATCCGTATC 59.100 52.381 0.00 0.00 0.00 2.24
2535 4607 1.899814 GCTGGGGTATCATCCGTATCA 59.100 52.381 0.00 0.00 0.00 2.15
2536 4608 2.501723 GCTGGGGTATCATCCGTATCAT 59.498 50.000 0.00 0.00 0.00 2.45
2537 4609 3.679917 GCTGGGGTATCATCCGTATCATG 60.680 52.174 0.00 0.00 0.00 3.07
2538 4610 3.769300 CTGGGGTATCATCCGTATCATGA 59.231 47.826 0.00 0.00 34.74 3.07
2539 4611 4.164204 TGGGGTATCATCCGTATCATGAA 58.836 43.478 0.00 0.00 33.94 2.57
2540 4612 4.595350 TGGGGTATCATCCGTATCATGAAA 59.405 41.667 0.00 0.00 33.94 2.69
2541 4613 4.935808 GGGGTATCATCCGTATCATGAAAC 59.064 45.833 0.00 0.00 33.94 2.78
2542 4614 4.935808 GGGTATCATCCGTATCATGAAACC 59.064 45.833 0.00 0.00 33.94 3.27
2543 4615 5.280011 GGGTATCATCCGTATCATGAAACCT 60.280 44.000 0.00 0.00 33.94 3.50
2544 4616 5.869888 GGTATCATCCGTATCATGAAACCTC 59.130 44.000 0.00 0.00 33.94 3.85
2545 4617 4.336889 TCATCCGTATCATGAAACCTCC 57.663 45.455 0.00 0.00 0.00 4.30
2546 4618 2.882927 TCCGTATCATGAAACCTCCG 57.117 50.000 0.00 0.00 0.00 4.63
2547 4619 2.380941 TCCGTATCATGAAACCTCCGA 58.619 47.619 0.00 0.00 0.00 4.55
2548 4620 2.100252 TCCGTATCATGAAACCTCCGAC 59.900 50.000 0.00 0.00 0.00 4.79
2549 4621 2.117137 CGTATCATGAAACCTCCGACG 58.883 52.381 0.00 0.00 0.00 5.12
2550 4622 2.223409 CGTATCATGAAACCTCCGACGA 60.223 50.000 0.00 0.00 0.00 4.20
2551 4623 2.586258 ATCATGAAACCTCCGACGAG 57.414 50.000 0.00 0.00 35.72 4.18
2552 4624 1.541379 TCATGAAACCTCCGACGAGA 58.459 50.000 0.00 0.00 38.52 4.04
2553 4625 1.890489 TCATGAAACCTCCGACGAGAA 59.110 47.619 0.00 0.00 38.52 2.87
2554 4626 2.297880 TCATGAAACCTCCGACGAGAAA 59.702 45.455 0.00 0.00 38.52 2.52
2555 4627 2.894763 TGAAACCTCCGACGAGAAAA 57.105 45.000 0.00 0.00 38.52 2.29
2556 4628 2.476821 TGAAACCTCCGACGAGAAAAC 58.523 47.619 0.00 0.00 38.52 2.43
2557 4629 2.101917 TGAAACCTCCGACGAGAAAACT 59.898 45.455 0.00 0.00 38.52 2.66
2558 4630 2.904697 AACCTCCGACGAGAAAACTT 57.095 45.000 0.00 0.00 38.52 2.66
2559 4631 4.202141 TGAAACCTCCGACGAGAAAACTTA 60.202 41.667 0.00 0.00 38.52 2.24
2560 4632 3.572604 ACCTCCGACGAGAAAACTTAG 57.427 47.619 0.00 0.00 38.52 2.18
2561 4633 2.260481 CCTCCGACGAGAAAACTTAGC 58.740 52.381 0.00 0.00 38.52 3.09
2562 4634 2.094649 CCTCCGACGAGAAAACTTAGCT 60.095 50.000 0.00 0.00 38.52 3.32
2563 4635 3.172824 CTCCGACGAGAAAACTTAGCTC 58.827 50.000 0.00 0.00 38.52 4.09
2564 4636 2.818432 TCCGACGAGAAAACTTAGCTCT 59.182 45.455 0.00 0.00 0.00 4.09
2565 4637 3.255149 TCCGACGAGAAAACTTAGCTCTT 59.745 43.478 0.00 0.00 0.00 2.85
2566 4638 3.365220 CCGACGAGAAAACTTAGCTCTTG 59.635 47.826 0.00 0.00 0.00 3.02
2567 4639 4.227538 CGACGAGAAAACTTAGCTCTTGA 58.772 43.478 0.00 0.00 0.00 3.02
2568 4640 4.859798 CGACGAGAAAACTTAGCTCTTGAT 59.140 41.667 0.00 0.00 0.00 2.57
2569 4641 5.003967 CGACGAGAAAACTTAGCTCTTGATC 59.996 44.000 0.00 0.00 0.00 2.92
2570 4642 5.784177 ACGAGAAAACTTAGCTCTTGATCA 58.216 37.500 0.00 0.00 0.00 2.92
2571 4643 5.866633 ACGAGAAAACTTAGCTCTTGATCAG 59.133 40.000 0.00 0.00 0.00 2.90
2572 4644 5.866633 CGAGAAAACTTAGCTCTTGATCAGT 59.133 40.000 0.00 0.00 0.00 3.41
2573 4645 6.034470 CGAGAAAACTTAGCTCTTGATCAGTC 59.966 42.308 0.00 0.00 0.00 3.51
2574 4646 5.866633 AGAAAACTTAGCTCTTGATCAGTCG 59.133 40.000 0.00 0.00 0.00 4.18
2575 4647 5.392767 AAACTTAGCTCTTGATCAGTCGA 57.607 39.130 0.00 0.00 0.00 4.20
2576 4648 4.364415 ACTTAGCTCTTGATCAGTCGAC 57.636 45.455 7.70 7.70 0.00 4.20
2577 4649 3.129638 ACTTAGCTCTTGATCAGTCGACC 59.870 47.826 13.01 0.00 0.00 4.79
2578 4650 0.820871 AGCTCTTGATCAGTCGACCC 59.179 55.000 13.01 0.00 0.00 4.46
2579 4651 0.820871 GCTCTTGATCAGTCGACCCT 59.179 55.000 13.01 0.00 0.00 4.34
2580 4652 1.470632 GCTCTTGATCAGTCGACCCTG 60.471 57.143 13.01 5.07 0.00 4.45
2581 4653 1.821753 CTCTTGATCAGTCGACCCTGT 59.178 52.381 13.01 0.00 34.02 4.00
2582 4654 3.017442 CTCTTGATCAGTCGACCCTGTA 58.983 50.000 13.01 0.00 34.02 2.74
2583 4655 3.017442 TCTTGATCAGTCGACCCTGTAG 58.983 50.000 13.01 3.50 34.02 2.74
2584 4656 2.801077 TGATCAGTCGACCCTGTAGA 57.199 50.000 13.01 1.49 34.02 2.59
2585 4657 2.366533 TGATCAGTCGACCCTGTAGAC 58.633 52.381 13.01 0.00 38.20 2.59
2586 4658 2.026169 TGATCAGTCGACCCTGTAGACT 60.026 50.000 13.01 4.46 46.30 3.24
2587 4659 2.581216 TCAGTCGACCCTGTAGACTT 57.419 50.000 13.01 0.00 43.80 3.01
2588 4660 2.872732 TCAGTCGACCCTGTAGACTTT 58.127 47.619 13.01 0.00 43.80 2.66
2589 4661 4.025040 TCAGTCGACCCTGTAGACTTTA 57.975 45.455 13.01 0.00 43.80 1.85
2590 4662 4.008330 TCAGTCGACCCTGTAGACTTTAG 58.992 47.826 13.01 0.00 43.80 1.85
2591 4663 3.757493 CAGTCGACCCTGTAGACTTTAGT 59.243 47.826 13.01 0.00 43.80 2.24
2592 4664 3.757493 AGTCGACCCTGTAGACTTTAGTG 59.243 47.826 13.01 0.00 43.80 2.74
2593 4665 3.087031 TCGACCCTGTAGACTTTAGTGG 58.913 50.000 0.00 0.00 0.00 4.00
2594 4666 2.416972 CGACCCTGTAGACTTTAGTGGC 60.417 54.545 0.00 0.00 0.00 5.01
2595 4667 1.549170 ACCCTGTAGACTTTAGTGGCG 59.451 52.381 0.00 0.00 0.00 5.69
2596 4668 1.549170 CCCTGTAGACTTTAGTGGCGT 59.451 52.381 0.00 0.00 0.00 5.68
2597 4669 2.607187 CCTGTAGACTTTAGTGGCGTG 58.393 52.381 0.00 0.00 0.00 5.34
2598 4670 2.607187 CTGTAGACTTTAGTGGCGTGG 58.393 52.381 0.00 0.00 0.00 4.94
2599 4671 1.337447 TGTAGACTTTAGTGGCGTGGC 60.337 52.381 0.00 0.00 0.00 5.01
2600 4672 1.067071 GTAGACTTTAGTGGCGTGGCT 60.067 52.381 0.00 0.00 0.00 4.75
2601 4673 0.037232 AGACTTTAGTGGCGTGGCTC 60.037 55.000 0.00 0.00 0.00 4.70
2602 4674 0.037232 GACTTTAGTGGCGTGGCTCT 60.037 55.000 3.50 3.50 0.00 4.09
2603 4675 0.320771 ACTTTAGTGGCGTGGCTCTG 60.321 55.000 8.09 0.00 0.00 3.35
2604 4676 1.003839 TTTAGTGGCGTGGCTCTGG 60.004 57.895 8.09 0.00 0.00 3.86
2605 4677 3.605749 TTAGTGGCGTGGCTCTGGC 62.606 63.158 8.09 0.00 37.82 4.85
2615 4687 1.896220 TGGCTCTGGCACTAACAAAG 58.104 50.000 0.00 0.00 40.87 2.77
2616 4688 1.419762 TGGCTCTGGCACTAACAAAGA 59.580 47.619 0.00 0.00 40.87 2.52
2617 4689 1.807142 GGCTCTGGCACTAACAAAGAC 59.193 52.381 0.00 0.00 40.87 3.01
2618 4690 2.494059 GCTCTGGCACTAACAAAGACA 58.506 47.619 0.00 0.00 38.54 3.41
2619 4691 3.077359 GCTCTGGCACTAACAAAGACAT 58.923 45.455 0.00 0.00 38.54 3.06
2620 4692 3.120060 GCTCTGGCACTAACAAAGACATG 60.120 47.826 0.00 0.00 38.54 3.21
2621 4693 4.067896 CTCTGGCACTAACAAAGACATGT 58.932 43.478 0.00 0.00 34.24 3.21
2622 4694 3.814842 TCTGGCACTAACAAAGACATGTG 59.185 43.478 1.15 0.00 32.81 3.21
2623 4695 3.550820 TGGCACTAACAAAGACATGTGT 58.449 40.909 1.15 0.00 32.81 3.72
2624 4696 4.709250 TGGCACTAACAAAGACATGTGTA 58.291 39.130 1.15 0.00 32.81 2.90
2625 4697 4.513692 TGGCACTAACAAAGACATGTGTAC 59.486 41.667 1.15 0.00 32.81 2.90
2626 4698 4.513692 GGCACTAACAAAGACATGTGTACA 59.486 41.667 1.15 0.00 32.81 2.90
2627 4699 5.334105 GGCACTAACAAAGACATGTGTACAG 60.334 44.000 1.15 0.00 32.81 2.74
2628 4700 5.679906 CACTAACAAAGACATGTGTACAGC 58.320 41.667 1.15 0.00 32.81 4.40
2629 4701 5.466728 CACTAACAAAGACATGTGTACAGCT 59.533 40.000 1.15 0.00 32.81 4.24
2630 4702 6.645003 CACTAACAAAGACATGTGTACAGCTA 59.355 38.462 1.15 0.00 32.81 3.32
2631 4703 5.924475 AACAAAGACATGTGTACAGCTAC 57.076 39.130 1.15 0.00 32.81 3.58
2632 4704 5.215252 ACAAAGACATGTGTACAGCTACT 57.785 39.130 1.15 0.00 30.82 2.57
2633 4705 4.991056 ACAAAGACATGTGTACAGCTACTG 59.009 41.667 1.15 0.00 32.90 2.74
2634 4706 3.238108 AGACATGTGTACAGCTACTGC 57.762 47.619 1.15 0.00 34.37 4.40
2635 4707 8.633522 ACAAAGACATGTGTACAGCTACTGCT 62.634 42.308 1.15 0.00 40.39 4.24
2644 4716 4.247612 GCTACTGCTGCCGCATGC 62.248 66.667 7.91 7.91 46.74 4.06
2656 4728 4.830765 GCATGCACCGCCGGAGTA 62.831 66.667 11.71 0.28 0.00 2.59
2657 4729 2.586079 CATGCACCGCCGGAGTAG 60.586 66.667 11.71 0.00 0.00 2.57
2658 4730 4.530857 ATGCACCGCCGGAGTAGC 62.531 66.667 11.71 9.14 0.00 3.58
2661 4733 4.814294 CACCGCCGGAGTAGCCAC 62.814 72.222 11.71 0.00 35.94 5.01
2664 4736 3.511595 CGCCGGAGTAGCCACGTA 61.512 66.667 5.05 0.00 35.94 3.57
2665 4737 2.103736 GCCGGAGTAGCCACGTAC 59.896 66.667 5.05 0.00 35.94 3.67
2666 4738 2.406401 CCGGAGTAGCCACGTACG 59.594 66.667 15.01 15.01 35.94 3.67
2667 4739 2.401766 CCGGAGTAGCCACGTACGT 61.402 63.158 16.72 16.72 35.94 3.57
2668 4740 1.226211 CGGAGTAGCCACGTACGTG 60.226 63.158 35.57 35.57 45.02 4.49
2669 4741 1.515736 GGAGTAGCCACGTACGTGC 60.516 63.158 36.76 30.41 44.16 5.34
2670 4742 1.505353 GAGTAGCCACGTACGTGCT 59.495 57.895 36.76 34.14 44.16 4.40
2671 4743 0.797249 GAGTAGCCACGTACGTGCTG 60.797 60.000 36.76 26.58 44.16 4.41
2672 4744 1.080974 GTAGCCACGTACGTGCTGT 60.081 57.895 36.76 25.65 44.16 4.40
2673 4745 0.168788 GTAGCCACGTACGTGCTGTA 59.831 55.000 36.76 24.74 44.16 2.74
2680 4752 4.563630 TACGTGCTGTACTTGCCG 57.436 55.556 0.00 14.79 0.00 5.69
2681 4753 1.661480 TACGTGCTGTACTTGCCGT 59.339 52.632 20.66 20.66 39.34 5.68
2682 4754 0.665068 TACGTGCTGTACTTGCCGTG 60.665 55.000 23.05 11.93 37.67 4.94
2683 4755 2.667318 CGTGCTGTACTTGCCGTGG 61.667 63.158 8.51 0.00 0.00 4.94
2684 4756 1.597027 GTGCTGTACTTGCCGTGGT 60.597 57.895 8.51 0.00 0.00 4.16
2685 4757 1.596752 TGCTGTACTTGCCGTGGTG 60.597 57.895 8.51 0.00 0.00 4.17
2686 4758 1.301401 GCTGTACTTGCCGTGGTGA 60.301 57.895 0.00 0.00 0.00 4.02
2687 4759 1.566018 GCTGTACTTGCCGTGGTGAC 61.566 60.000 0.00 0.00 0.00 3.67
2688 4760 1.282248 CTGTACTTGCCGTGGTGACG 61.282 60.000 0.00 0.00 45.67 4.35
2689 4761 2.356553 TACTTGCCGTGGTGACGC 60.357 61.111 0.00 0.00 44.68 5.19
2705 4777 3.302344 GCGGGCTTGCCTGGAAAA 61.302 61.111 20.57 0.00 0.00 2.29
2706 4778 2.650778 CGGGCTTGCCTGGAAAAC 59.349 61.111 12.42 0.00 0.00 2.43
2707 4779 2.931068 CGGGCTTGCCTGGAAAACC 61.931 63.158 12.42 0.00 0.00 3.27
2708 4780 2.650778 GGCTTGCCTGGAAAACCG 59.349 61.111 4.11 0.00 0.00 4.44
2709 4781 2.200337 GGCTTGCCTGGAAAACCGT 61.200 57.895 4.11 0.00 0.00 4.83
2710 4782 1.007387 GCTTGCCTGGAAAACCGTG 60.007 57.895 0.00 0.00 0.00 4.94
2711 4783 1.007387 CTTGCCTGGAAAACCGTGC 60.007 57.895 0.00 0.00 0.00 5.34
2712 4784 2.420466 CTTGCCTGGAAAACCGTGCC 62.420 60.000 0.00 0.00 0.00 5.01
2713 4785 4.038080 GCCTGGAAAACCGTGCCG 62.038 66.667 0.00 0.00 0.00 5.69
2714 4786 4.038080 CCTGGAAAACCGTGCCGC 62.038 66.667 0.00 0.00 0.00 6.53
2715 4787 2.978010 CTGGAAAACCGTGCCGCT 60.978 61.111 0.00 0.00 0.00 5.52
2716 4788 1.669760 CTGGAAAACCGTGCCGCTA 60.670 57.895 0.00 0.00 0.00 4.26
2717 4789 1.908066 CTGGAAAACCGTGCCGCTAC 61.908 60.000 0.00 0.00 0.00 3.58
2718 4790 2.683859 GGAAAACCGTGCCGCTACC 61.684 63.158 0.00 0.00 0.00 3.18
2719 4791 3.018840 GAAAACCGTGCCGCTACCG 62.019 63.158 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.244178 GGGTCCTCTCAACGACACTC 59.756 60.000 0.00 0.00 29.40 3.51
1 2 1.524863 CGGGTCCTCTCAACGACACT 61.525 60.000 0.00 0.00 29.81 3.55
2 3 1.080705 CGGGTCCTCTCAACGACAC 60.081 63.158 0.00 0.00 0.00 3.67
3 4 2.927580 GCGGGTCCTCTCAACGACA 61.928 63.158 0.00 0.00 0.00 4.35
4 5 2.126031 GCGGGTCCTCTCAACGAC 60.126 66.667 0.00 0.00 0.00 4.34
5 6 3.379445 GGCGGGTCCTCTCAACGA 61.379 66.667 0.00 0.00 0.00 3.85
6 7 4.452733 GGGCGGGTCCTCTCAACG 62.453 72.222 0.00 0.00 34.39 4.10
7 8 4.452733 CGGGCGGGTCCTCTCAAC 62.453 72.222 0.00 0.00 34.39 3.18
17 18 2.551912 GCATGATTAACCGGGCGGG 61.552 63.158 6.32 9.88 43.62 6.13
18 19 2.551912 GGCATGATTAACCGGGCGG 61.552 63.158 6.32 0.00 42.03 6.13
19 20 2.892334 CGGCATGATTAACCGGGCG 61.892 63.158 6.32 0.00 43.23 6.13
20 21 1.098712 TTCGGCATGATTAACCGGGC 61.099 55.000 6.32 0.00 46.87 6.13
21 22 0.944386 CTTCGGCATGATTAACCGGG 59.056 55.000 6.32 0.00 46.87 5.73
22 23 1.597663 GACTTCGGCATGATTAACCGG 59.402 52.381 0.00 0.00 46.87 5.28
24 25 1.597663 CGGACTTCGGCATGATTAACC 59.402 52.381 0.00 0.00 34.75 2.85
25 26 2.540101 CTCGGACTTCGGCATGATTAAC 59.460 50.000 0.00 0.00 39.77 2.01
26 27 2.429250 TCTCGGACTTCGGCATGATTAA 59.571 45.455 0.00 0.00 39.77 1.40
27 28 2.028876 TCTCGGACTTCGGCATGATTA 58.971 47.619 0.00 0.00 39.77 1.75
28 29 0.824109 TCTCGGACTTCGGCATGATT 59.176 50.000 0.00 0.00 39.77 2.57
29 30 0.824109 TTCTCGGACTTCGGCATGAT 59.176 50.000 0.00 0.00 39.77 2.45
30 31 0.606096 TTTCTCGGACTTCGGCATGA 59.394 50.000 0.00 0.00 39.77 3.07
31 32 1.394917 CTTTTCTCGGACTTCGGCATG 59.605 52.381 0.00 0.00 39.77 4.06
32 33 1.002087 ACTTTTCTCGGACTTCGGCAT 59.998 47.619 0.00 0.00 39.77 4.40
33 34 0.391597 ACTTTTCTCGGACTTCGGCA 59.608 50.000 0.00 0.00 39.77 5.69
34 35 1.069255 GACTTTTCTCGGACTTCGGC 58.931 55.000 0.00 0.00 39.77 5.54
35 36 1.335689 ACGACTTTTCTCGGACTTCGG 60.336 52.381 0.00 0.00 38.02 4.30
36 37 1.714460 CACGACTTTTCTCGGACTTCG 59.286 52.381 0.00 0.00 38.02 3.79
37 38 2.059541 CCACGACTTTTCTCGGACTTC 58.940 52.381 0.00 0.00 38.02 3.01
54 55 1.660560 ATGCTGCGCTTCCATTCCAC 61.661 55.000 9.73 0.00 0.00 4.02
78 79 3.887339 AGCTTGTCTTTCTCGCTTTTC 57.113 42.857 0.00 0.00 0.00 2.29
112 117 3.896133 GCCGTCCATGCATGCCTG 61.896 66.667 21.69 15.92 0.00 4.85
114 119 2.894240 CTTTGCCGTCCATGCATGCC 62.894 60.000 21.69 12.33 38.76 4.40
115 120 1.517694 CTTTGCCGTCCATGCATGC 60.518 57.895 21.69 11.82 38.76 4.06
116 121 1.517694 GCTTTGCCGTCCATGCATG 60.518 57.895 20.19 20.19 38.76 4.06
117 122 1.534336 TTGCTTTGCCGTCCATGCAT 61.534 50.000 0.00 0.00 38.76 3.96
118 123 1.534336 ATTGCTTTGCCGTCCATGCA 61.534 50.000 0.00 0.00 36.84 3.96
122 127 1.534336 ATGCATTGCTTTGCCGTCCA 61.534 50.000 10.49 0.00 42.06 4.02
123 128 1.079875 CATGCATTGCTTTGCCGTCC 61.080 55.000 10.49 0.00 42.06 4.79
124 129 2.365823 CATGCATTGCTTTGCCGTC 58.634 52.632 10.49 0.00 42.06 4.79
125 130 4.582760 CATGCATTGCTTTGCCGT 57.417 50.000 10.49 0.00 42.06 5.68
136 141 0.249615 ATCTACGCGTCTGCATGCAT 60.250 50.000 22.97 7.74 42.97 3.96
142 147 1.589196 GTGGGATCTACGCGTCTGC 60.589 63.158 18.63 7.24 37.91 4.26
143 148 1.065928 GGTGGGATCTACGCGTCTG 59.934 63.158 18.63 10.84 0.00 3.51
170 176 2.904866 TTGCCGACTTGGGTGTGC 60.905 61.111 0.00 0.00 38.63 4.57
172 178 1.227853 GACTTGCCGACTTGGGTGT 60.228 57.895 0.00 0.00 38.63 4.16
173 179 1.966451 GGACTTGCCGACTTGGGTG 60.966 63.158 0.00 0.00 38.63 4.61
174 180 1.779061 ATGGACTTGCCGACTTGGGT 61.779 55.000 0.00 0.00 40.66 4.51
176 182 2.107950 TTATGGACTTGCCGACTTGG 57.892 50.000 0.00 0.00 40.66 3.61
177 183 3.270027 TGATTATGGACTTGCCGACTTG 58.730 45.455 0.00 0.00 40.66 3.16
180 186 2.031682 GCATGATTATGGACTTGCCGAC 60.032 50.000 0.00 0.00 40.66 4.79
181 187 2.221169 GCATGATTATGGACTTGCCGA 58.779 47.619 0.00 0.00 40.66 5.54
182 188 1.267806 GGCATGATTATGGACTTGCCG 59.732 52.381 0.00 0.00 43.54 5.69
183 189 1.267806 CGGCATGATTATGGACTTGCC 59.732 52.381 0.00 0.00 46.61 4.52
184 190 2.221169 TCGGCATGATTATGGACTTGC 58.779 47.619 0.00 0.00 36.77 4.01
185 191 4.898829 TTTCGGCATGATTATGGACTTG 57.101 40.909 0.00 0.00 34.79 3.16
186 192 4.097892 GGTTTTCGGCATGATTATGGACTT 59.902 41.667 0.00 0.00 34.79 3.01
187 193 3.632145 GGTTTTCGGCATGATTATGGACT 59.368 43.478 0.00 0.00 34.79 3.85
188 194 3.632145 AGGTTTTCGGCATGATTATGGAC 59.368 43.478 0.00 0.00 34.79 4.02
189 195 3.897239 AGGTTTTCGGCATGATTATGGA 58.103 40.909 0.00 0.00 34.79 3.41
190 196 5.063204 TCTAGGTTTTCGGCATGATTATGG 58.937 41.667 0.00 0.00 34.79 2.74
191 197 6.808008 ATCTAGGTTTTCGGCATGATTATG 57.192 37.500 0.00 0.00 37.36 1.90
192 198 6.998074 TCAATCTAGGTTTTCGGCATGATTAT 59.002 34.615 0.00 0.00 0.00 1.28
193 199 6.353323 TCAATCTAGGTTTTCGGCATGATTA 58.647 36.000 0.00 0.00 0.00 1.75
194 200 5.192927 TCAATCTAGGTTTTCGGCATGATT 58.807 37.500 0.00 0.00 0.00 2.57
195 201 4.780815 TCAATCTAGGTTTTCGGCATGAT 58.219 39.130 0.00 0.00 0.00 2.45
196 202 4.214986 TCAATCTAGGTTTTCGGCATGA 57.785 40.909 0.00 0.00 0.00 3.07
197 203 4.576053 TCATCAATCTAGGTTTTCGGCATG 59.424 41.667 0.00 0.00 0.00 4.06
198 204 4.780815 TCATCAATCTAGGTTTTCGGCAT 58.219 39.130 0.00 0.00 0.00 4.40
199 205 4.214986 TCATCAATCTAGGTTTTCGGCA 57.785 40.909 0.00 0.00 0.00 5.69
200 206 4.084328 CGATCATCAATCTAGGTTTTCGGC 60.084 45.833 0.00 0.00 31.68 5.54
201 207 5.050490 ACGATCATCAATCTAGGTTTTCGG 58.950 41.667 0.00 0.00 31.68 4.30
202 208 6.292381 GGAACGATCATCAATCTAGGTTTTCG 60.292 42.308 0.00 0.00 31.68 3.46
227 233 4.106029 TCGACTTTACCCTCTGAATTCG 57.894 45.455 0.04 0.00 0.00 3.34
236 242 1.683418 GGGCCGATCGACTTTACCCT 61.683 60.000 18.66 0.00 32.88 4.34
238 244 0.106149 ATGGGCCGATCGACTTTACC 59.894 55.000 18.66 9.43 0.00 2.85
240 246 0.531974 GCATGGGCCGATCGACTTTA 60.532 55.000 18.66 0.00 0.00 1.85
241 247 1.819632 GCATGGGCCGATCGACTTT 60.820 57.895 18.66 0.00 0.00 2.66
242 248 2.203070 GCATGGGCCGATCGACTT 60.203 61.111 18.66 1.93 0.00 3.01
243 249 3.451556 CTGCATGGGCCGATCGACT 62.452 63.158 18.66 0.00 40.13 4.18
244 250 2.969238 CTGCATGGGCCGATCGAC 60.969 66.667 18.66 4.24 40.13 4.20
245 251 3.153781 TCTGCATGGGCCGATCGA 61.154 61.111 18.66 0.00 40.13 3.59
334 341 2.880648 GGCTGTGCTTTGGCTAGC 59.119 61.111 6.04 6.04 43.33 3.42
335 342 3.044059 GCGGCTGTGCTTTGGCTAG 62.044 63.158 0.00 0.00 39.59 3.42
336 343 3.055719 GCGGCTGTGCTTTGGCTA 61.056 61.111 0.00 0.00 39.59 3.93
339 358 4.389576 GACGCGGCTGTGCTTTGG 62.390 66.667 12.47 0.00 0.00 3.28
456 478 0.394216 GCATGCACTATGGTGACCCA 60.394 55.000 14.21 1.79 45.61 4.51
457 479 0.394216 TGCATGCACTATGGTGACCC 60.394 55.000 18.46 0.00 45.61 4.46
458 480 1.335810 CATGCATGCACTATGGTGACC 59.664 52.381 25.37 0.00 45.61 4.02
459 481 2.019249 ACATGCATGCACTATGGTGAC 58.981 47.619 25.37 5.10 45.61 3.67
460 482 2.423446 ACATGCATGCACTATGGTGA 57.577 45.000 25.37 0.00 45.61 4.02
461 483 2.540157 CGAACATGCATGCACTATGGTG 60.540 50.000 25.37 18.55 45.53 4.17
466 488 1.009078 GCTCGAACATGCATGCACTA 58.991 50.000 25.37 11.41 0.00 2.74
479 501 2.126618 CCGTACTGCGTGCTCGAA 60.127 61.111 13.13 0.00 39.71 3.71
480 502 3.318539 GACCGTACTGCGTGCTCGA 62.319 63.158 13.13 0.00 39.71 4.04
481 503 2.797866 AAGACCGTACTGCGTGCTCG 62.798 60.000 3.31 3.31 39.32 5.03
489 526 4.634004 TGAATGGCAATTAAGACCGTACTG 59.366 41.667 0.00 0.00 0.00 2.74
492 529 5.092554 TCTGAATGGCAATTAAGACCGTA 57.907 39.130 0.00 0.00 29.45 4.02
503 540 6.406177 GCATAGGAGAAATTTCTGAATGGCAA 60.406 38.462 25.12 2.87 37.73 4.52
506 543 5.278169 CGGCATAGGAGAAATTTCTGAATGG 60.278 44.000 25.12 12.25 37.73 3.16
509 546 4.199310 CCGGCATAGGAGAAATTTCTGAA 58.801 43.478 25.12 10.33 37.73 3.02
518 555 0.980754 TCAAGCCCGGCATAGGAGAA 60.981 55.000 13.15 0.00 0.00 2.87
523 560 5.240623 TGTTAATATTTCAAGCCCGGCATAG 59.759 40.000 13.15 0.42 0.00 2.23
526 568 3.357203 TGTTAATATTTCAAGCCCGGCA 58.643 40.909 13.15 0.00 0.00 5.69
531 573 7.229506 ACTCAGCCTATGTTAATATTTCAAGCC 59.770 37.037 0.00 0.00 0.00 4.35
541 583 5.683876 AGTCACACTCAGCCTATGTTAAT 57.316 39.130 0.00 0.00 0.00 1.40
543 585 5.483685 AAAGTCACACTCAGCCTATGTTA 57.516 39.130 0.00 0.00 0.00 2.41
548 590 2.810400 GCCAAAAGTCACACTCAGCCTA 60.810 50.000 0.00 0.00 0.00 3.93
552 594 1.002033 GCTGCCAAAAGTCACACTCAG 60.002 52.381 0.00 0.00 0.00 3.35
577 619 0.906066 TTAGGGGCTATGTTCGTGCA 59.094 50.000 0.00 0.00 0.00 4.57
603 645 2.590007 GATAGTGCAGGGCCGCAG 60.590 66.667 20.48 6.33 44.05 5.18
604 646 4.175337 GGATAGTGCAGGGCCGCA 62.175 66.667 17.02 17.02 40.32 5.69
605 647 3.816367 GAGGATAGTGCAGGGCCGC 62.816 68.421 12.46 12.46 0.00 6.53
606 648 1.762522 ATGAGGATAGTGCAGGGCCG 61.763 60.000 0.00 0.00 0.00 6.13
607 649 1.002544 GTATGAGGATAGTGCAGGGCC 59.997 57.143 0.00 0.00 0.00 5.80
610 652 3.750130 GCAATGTATGAGGATAGTGCAGG 59.250 47.826 0.00 0.00 0.00 4.85
759 2790 0.670546 CCCTCCAAGTACACGCACAG 60.671 60.000 0.00 0.00 0.00 3.66
760 2791 1.369692 CCCTCCAAGTACACGCACA 59.630 57.895 0.00 0.00 0.00 4.57
764 2795 0.388134 CGTCACCCTCCAAGTACACG 60.388 60.000 0.00 0.00 0.00 4.49
795 2826 2.358619 CCGGGGCCCTCATTGAAA 59.641 61.111 24.38 0.00 0.00 2.69
881 2917 1.092348 TGGTGAGACGACGACATAGG 58.908 55.000 0.00 0.00 0.00 2.57
1032 3071 2.282958 TGGGAGAACGAGTCGGCT 60.283 61.111 18.30 13.51 0.00 5.52
1090 3132 2.721167 CGAAGAGGCGGATGGTGGA 61.721 63.158 0.00 0.00 0.00 4.02
1251 3293 3.923864 TGCGCGTTCTGGTGTCCT 61.924 61.111 8.43 0.00 0.00 3.85
1254 3296 2.512745 TTGTGCGCGTTCTGGTGT 60.513 55.556 8.43 0.00 0.00 4.16
1514 3559 4.054825 CGGCGGCACCAAAAGCAT 62.055 61.111 10.53 0.00 39.03 3.79
1559 3607 4.020617 CCTCTCCGGTGCCAGCAA 62.021 66.667 0.00 0.00 0.00 3.91
1579 3627 0.331278 TTGTGCCCATCCTTACCAGG 59.669 55.000 0.00 0.00 42.50 4.45
1581 3629 1.959508 GCATTGTGCCCATCCTTACCA 60.960 52.381 0.00 0.00 37.42 3.25
1594 3642 1.061411 CGCTCATCACCGCATTGTG 59.939 57.895 0.00 0.00 37.59 3.33
1716 3764 5.294356 ACAGTAATTGCAACGAACTACAGA 58.706 37.500 0.00 0.00 0.00 3.41
1724 3772 3.845178 AGATCGACAGTAATTGCAACGA 58.155 40.909 0.00 4.72 35.73 3.85
1751 3802 5.005094 CCTGAACAATTCCGGTAAAGGTAA 58.995 41.667 0.00 0.00 30.32 2.85
1754 3805 3.418047 ACCTGAACAATTCCGGTAAAGG 58.582 45.455 0.00 1.39 44.17 3.11
1762 3813 3.826157 TGGTGATTGACCTGAACAATTCC 59.174 43.478 0.00 0.00 46.32 3.01
1763 3814 5.047802 ACATGGTGATTGACCTGAACAATTC 60.048 40.000 0.00 0.00 46.32 2.17
1811 3862 1.227263 CGCCCTCGGTTACAGATGG 60.227 63.158 2.86 2.86 0.00 3.51
1821 3872 0.596082 AAACAAATGAACGCCCTCGG 59.404 50.000 0.00 0.00 40.69 4.63
1857 3913 9.881649 TCAAATTAAATGCATGCCAACTTAATA 57.118 25.926 16.68 0.00 30.98 0.98
1892 3948 7.894364 ACAAAATGGAGAGAAGTAGTAGGAGTA 59.106 37.037 0.00 0.00 0.00 2.59
1893 3949 6.726764 ACAAAATGGAGAGAAGTAGTAGGAGT 59.273 38.462 0.00 0.00 0.00 3.85
1894 3950 7.176589 ACAAAATGGAGAGAAGTAGTAGGAG 57.823 40.000 0.00 0.00 0.00 3.69
1895 3951 7.554959 AACAAAATGGAGAGAAGTAGTAGGA 57.445 36.000 0.00 0.00 0.00 2.94
1896 3952 9.372369 CTAAACAAAATGGAGAGAAGTAGTAGG 57.628 37.037 0.00 0.00 0.00 3.18
1897 3953 8.874816 GCTAAACAAAATGGAGAGAAGTAGTAG 58.125 37.037 0.00 0.00 0.00 2.57
1898 3954 8.594550 AGCTAAACAAAATGGAGAGAAGTAGTA 58.405 33.333 0.00 0.00 0.00 1.82
1899 3955 7.454225 AGCTAAACAAAATGGAGAGAAGTAGT 58.546 34.615 0.00 0.00 0.00 2.73
1900 3956 7.913674 AGCTAAACAAAATGGAGAGAAGTAG 57.086 36.000 0.00 0.00 0.00 2.57
1917 3973 2.346803 TCGCTCATGACCAAGCTAAAC 58.653 47.619 0.00 0.00 36.35 2.01
1949 4005 0.864797 GCTAACGCCTAACGGAGTCG 60.865 60.000 0.00 0.00 45.00 4.18
1959 4015 2.826725 AGAACTAGACTTGCTAACGCCT 59.173 45.455 0.00 0.00 34.43 5.52
1960 4016 3.233684 AGAACTAGACTTGCTAACGCC 57.766 47.619 0.00 0.00 34.43 5.68
1961 4017 5.232610 TCTAGAACTAGACTTGCTAACGC 57.767 43.478 7.37 0.00 37.28 4.84
1962 4018 7.017498 TCATCTAGAACTAGACTTGCTAACG 57.983 40.000 12.83 0.00 44.11 3.18
2030 4088 2.730550 AAATGCCCGCTCAAGAAAAG 57.269 45.000 0.00 0.00 0.00 2.27
2106 4164 8.204836 ACCATAGTCACTGTCTTGAATAATACC 58.795 37.037 0.00 0.00 30.38 2.73
2113 4174 5.070446 ACTGAACCATAGTCACTGTCTTGAA 59.930 40.000 0.00 0.00 0.00 2.69
2129 4190 3.485463 AATTCCAAGTCGACTGAACCA 57.515 42.857 20.85 2.90 0.00 3.67
2167 4228 2.975732 TAGCAGTGATGGAAGAGCTG 57.024 50.000 0.00 0.00 33.83 4.24
2211 4273 1.694150 TCCAACAGGTGAGAACTCTGG 59.306 52.381 3.51 2.07 33.19 3.86
2241 4303 2.221906 TTTGACGACTAGGCCGGCTC 62.222 60.000 28.56 16.85 35.76 4.70
2244 4306 1.804326 CGTTTGACGACTAGGCCGG 60.804 63.158 0.00 0.00 46.05 6.13
2248 4310 1.347320 GCTTCCGTTTGACGACTAGG 58.653 55.000 1.51 0.00 46.05 3.02
2260 4322 4.961511 TGCTGAACGCGCTTCCGT 62.962 61.111 5.73 0.00 44.41 4.69
2261 4323 2.886512 GAATGCTGAACGCGCTTCCG 62.887 60.000 5.73 7.23 43.27 4.30
2262 4324 1.226128 GAATGCTGAACGCGCTTCC 60.226 57.895 5.73 0.00 43.27 3.46
2264 4326 1.062587 GTATGAATGCTGAACGCGCTT 59.937 47.619 5.73 0.00 43.27 4.68
2266 4328 0.651610 CGTATGAATGCTGAACGCGC 60.652 55.000 5.73 0.00 43.27 6.86
2267 4329 3.404307 CGTATGAATGCTGAACGCG 57.596 52.632 3.53 3.53 43.27 6.01
2269 4331 0.920664 TCGCGTATGAATGCTGAACG 59.079 50.000 5.77 0.00 35.33 3.95
2301 4373 3.555795 GCAGTTCCTCTGTCACTTGATCA 60.556 47.826 0.00 0.00 45.23 2.92
2311 4383 2.900106 GCCCAGGCAGTTCCTCTGT 61.900 63.158 3.12 0.00 45.52 3.41
2336 4408 1.068585 ACCTCACAACGACGGGAAC 59.931 57.895 0.00 0.00 0.00 3.62
2337 4409 1.068417 CACCTCACAACGACGGGAA 59.932 57.895 0.00 0.00 0.00 3.97
2338 4410 2.129146 ACACCTCACAACGACGGGA 61.129 57.895 0.00 0.00 0.00 5.14
2339 4411 1.954146 CACACCTCACAACGACGGG 60.954 63.158 0.00 0.00 0.00 5.28
2340 4412 0.528901 TTCACACCTCACAACGACGG 60.529 55.000 0.00 0.00 0.00 4.79
2341 4413 0.852777 CTTCACACCTCACAACGACG 59.147 55.000 0.00 0.00 0.00 5.12
2342 4414 1.859080 GACTTCACACCTCACAACGAC 59.141 52.381 0.00 0.00 0.00 4.34
2343 4415 1.535226 CGACTTCACACCTCACAACGA 60.535 52.381 0.00 0.00 0.00 3.85
2344 4416 0.852777 CGACTTCACACCTCACAACG 59.147 55.000 0.00 0.00 0.00 4.10
2345 4417 1.859080 GACGACTTCACACCTCACAAC 59.141 52.381 0.00 0.00 0.00 3.32
2346 4418 1.535226 CGACGACTTCACACCTCACAA 60.535 52.381 0.00 0.00 0.00 3.33
2347 4419 0.030235 CGACGACTTCACACCTCACA 59.970 55.000 0.00 0.00 0.00 3.58
2348 4420 1.276145 GCGACGACTTCACACCTCAC 61.276 60.000 0.00 0.00 0.00 3.51
2349 4421 1.007734 GCGACGACTTCACACCTCA 60.008 57.895 0.00 0.00 0.00 3.86
2350 4422 1.733399 GGCGACGACTTCACACCTC 60.733 63.158 0.00 0.00 0.00 3.85
2351 4423 2.338984 GGCGACGACTTCACACCT 59.661 61.111 0.00 0.00 0.00 4.00
2352 4424 2.737376 GGGCGACGACTTCACACC 60.737 66.667 0.00 0.00 0.00 4.16
2353 4425 1.870055 TAGGGGCGACGACTTCACAC 61.870 60.000 0.00 0.00 0.00 3.82
2354 4426 1.604308 TAGGGGCGACGACTTCACA 60.604 57.895 0.00 0.00 0.00 3.58
2355 4427 1.153881 GTAGGGGCGACGACTTCAC 60.154 63.158 0.00 0.00 0.00 3.18
2356 4428 2.345760 GGTAGGGGCGACGACTTCA 61.346 63.158 0.00 0.00 0.00 3.02
2357 4429 2.493501 GGTAGGGGCGACGACTTC 59.506 66.667 0.00 0.00 0.00 3.01
2358 4430 3.446570 CGGTAGGGGCGACGACTT 61.447 66.667 0.00 0.00 0.00 3.01
2367 4439 0.179029 AAAATCGATGCCGGTAGGGG 60.179 55.000 1.90 0.00 38.20 4.79
2368 4440 1.226746 GAAAATCGATGCCGGTAGGG 58.773 55.000 1.90 0.00 38.20 3.53
2369 4441 1.597663 GTGAAAATCGATGCCGGTAGG 59.402 52.381 1.90 0.00 41.62 3.18
2370 4442 1.597663 GGTGAAAATCGATGCCGGTAG 59.402 52.381 1.90 0.00 36.24 3.18
2371 4443 1.658994 GGTGAAAATCGATGCCGGTA 58.341 50.000 1.90 0.00 36.24 4.02
2372 4444 1.366111 CGGTGAAAATCGATGCCGGT 61.366 55.000 1.90 0.00 36.05 5.28
2373 4445 1.351707 CGGTGAAAATCGATGCCGG 59.648 57.895 0.00 0.00 36.05 6.13
2374 4446 1.351707 CCGGTGAAAATCGATGCCG 59.648 57.895 0.00 8.48 38.99 5.69
2375 4447 1.727467 CCCGGTGAAAATCGATGCC 59.273 57.895 0.00 0.00 0.00 4.40
2376 4448 1.064134 GCCCGGTGAAAATCGATGC 59.936 57.895 0.00 0.00 0.00 3.91
2377 4449 1.024271 ATGCCCGGTGAAAATCGATG 58.976 50.000 0.00 0.00 0.00 3.84
2378 4450 1.024271 CATGCCCGGTGAAAATCGAT 58.976 50.000 0.00 0.00 0.00 3.59
2379 4451 0.035915 TCATGCCCGGTGAAAATCGA 60.036 50.000 0.00 0.00 0.00 3.59
2380 4452 0.808125 TTCATGCCCGGTGAAAATCG 59.192 50.000 0.00 0.00 32.98 3.34
2381 4453 1.135112 GGTTCATGCCCGGTGAAAATC 60.135 52.381 7.49 0.00 37.34 2.17
2382 4454 0.894835 GGTTCATGCCCGGTGAAAAT 59.105 50.000 7.49 0.00 37.34 1.82
2383 4455 0.178975 AGGTTCATGCCCGGTGAAAA 60.179 50.000 7.49 0.00 37.34 2.29
2384 4456 0.608035 GAGGTTCATGCCCGGTGAAA 60.608 55.000 7.49 0.00 37.34 2.69
2385 4457 1.002624 GAGGTTCATGCCCGGTGAA 60.003 57.895 0.00 0.41 33.46 3.18
2386 4458 2.184020 CTGAGGTTCATGCCCGGTGA 62.184 60.000 0.00 0.00 0.00 4.02
2387 4459 1.746615 CTGAGGTTCATGCCCGGTG 60.747 63.158 0.00 0.00 0.00 4.94
2388 4460 1.274703 ATCTGAGGTTCATGCCCGGT 61.275 55.000 0.00 0.00 0.00 5.28
2389 4461 0.533755 GATCTGAGGTTCATGCCCGG 60.534 60.000 0.00 0.00 0.00 5.73
2390 4462 0.467384 AGATCTGAGGTTCATGCCCG 59.533 55.000 0.00 0.00 0.00 6.13
2391 4463 1.202746 GGAGATCTGAGGTTCATGCCC 60.203 57.143 0.00 0.00 0.00 5.36
2392 4464 1.487976 TGGAGATCTGAGGTTCATGCC 59.512 52.381 0.00 0.00 0.00 4.40
2393 4465 2.996249 TGGAGATCTGAGGTTCATGC 57.004 50.000 0.00 0.00 0.00 4.06
2394 4466 3.390311 TGGATGGAGATCTGAGGTTCATG 59.610 47.826 0.00 0.00 0.00 3.07
2395 4467 3.662078 TGGATGGAGATCTGAGGTTCAT 58.338 45.455 0.00 0.00 0.00 2.57
2396 4468 3.120468 TGGATGGAGATCTGAGGTTCA 57.880 47.619 0.00 0.00 0.00 3.18
2397 4469 4.195416 GTTTGGATGGAGATCTGAGGTTC 58.805 47.826 0.00 0.00 0.00 3.62
2398 4470 3.588842 TGTTTGGATGGAGATCTGAGGTT 59.411 43.478 0.00 0.00 0.00 3.50
2399 4471 3.184628 TGTTTGGATGGAGATCTGAGGT 58.815 45.455 0.00 0.00 0.00 3.85
2400 4472 3.806380 CTGTTTGGATGGAGATCTGAGG 58.194 50.000 0.00 0.00 0.00 3.86
2401 4473 3.204526 GCTGTTTGGATGGAGATCTGAG 58.795 50.000 0.00 0.00 0.00 3.35
2402 4474 2.092753 GGCTGTTTGGATGGAGATCTGA 60.093 50.000 0.00 0.00 0.00 3.27
2403 4475 2.092538 AGGCTGTTTGGATGGAGATCTG 60.093 50.000 0.00 0.00 0.00 2.90
2404 4476 2.172293 GAGGCTGTTTGGATGGAGATCT 59.828 50.000 0.00 0.00 0.00 2.75
2405 4477 2.092753 TGAGGCTGTTTGGATGGAGATC 60.093 50.000 0.00 0.00 0.00 2.75
2406 4478 1.918262 TGAGGCTGTTTGGATGGAGAT 59.082 47.619 0.00 0.00 0.00 2.75
2407 4479 1.361204 TGAGGCTGTTTGGATGGAGA 58.639 50.000 0.00 0.00 0.00 3.71
2408 4480 2.205022 TTGAGGCTGTTTGGATGGAG 57.795 50.000 0.00 0.00 0.00 3.86
2409 4481 2.627699 GTTTTGAGGCTGTTTGGATGGA 59.372 45.455 0.00 0.00 0.00 3.41
2410 4482 2.289010 GGTTTTGAGGCTGTTTGGATGG 60.289 50.000 0.00 0.00 0.00 3.51
2411 4483 2.629617 AGGTTTTGAGGCTGTTTGGATG 59.370 45.455 0.00 0.00 0.00 3.51
2412 4484 2.893489 GAGGTTTTGAGGCTGTTTGGAT 59.107 45.455 0.00 0.00 0.00 3.41
2413 4485 2.306847 GAGGTTTTGAGGCTGTTTGGA 58.693 47.619 0.00 0.00 0.00 3.53
2414 4486 1.341209 GGAGGTTTTGAGGCTGTTTGG 59.659 52.381 0.00 0.00 0.00 3.28
2415 4487 1.341209 GGGAGGTTTTGAGGCTGTTTG 59.659 52.381 0.00 0.00 0.00 2.93
2416 4488 1.704641 GGGAGGTTTTGAGGCTGTTT 58.295 50.000 0.00 0.00 0.00 2.83
2417 4489 0.537371 CGGGAGGTTTTGAGGCTGTT 60.537 55.000 0.00 0.00 0.00 3.16
2418 4490 1.073199 CGGGAGGTTTTGAGGCTGT 59.927 57.895 0.00 0.00 0.00 4.40
2419 4491 0.323629 TACGGGAGGTTTTGAGGCTG 59.676 55.000 0.00 0.00 0.00 4.85
2420 4492 1.065418 CATACGGGAGGTTTTGAGGCT 60.065 52.381 0.00 0.00 0.00 4.58
2421 4493 1.379527 CATACGGGAGGTTTTGAGGC 58.620 55.000 0.00 0.00 0.00 4.70
2422 4494 1.339631 TGCATACGGGAGGTTTTGAGG 60.340 52.381 0.00 0.00 0.00 3.86
2423 4495 2.107950 TGCATACGGGAGGTTTTGAG 57.892 50.000 0.00 0.00 0.00 3.02
2424 4496 2.639065 GATGCATACGGGAGGTTTTGA 58.361 47.619 0.00 0.00 0.00 2.69
2425 4497 1.676006 GGATGCATACGGGAGGTTTTG 59.324 52.381 0.00 0.00 0.00 2.44
2426 4498 1.283613 TGGATGCATACGGGAGGTTTT 59.716 47.619 4.01 0.00 0.00 2.43
2427 4499 0.916086 TGGATGCATACGGGAGGTTT 59.084 50.000 4.01 0.00 0.00 3.27
2428 4500 1.072331 GATGGATGCATACGGGAGGTT 59.928 52.381 4.01 0.00 0.00 3.50
2429 4501 0.687354 GATGGATGCATACGGGAGGT 59.313 55.000 4.01 0.00 0.00 3.85
2430 4502 0.390340 CGATGGATGCATACGGGAGG 60.390 60.000 4.01 0.00 0.00 4.30
2431 4503 0.603065 TCGATGGATGCATACGGGAG 59.397 55.000 4.01 0.00 0.00 4.30
2432 4504 1.204704 GATCGATGGATGCATACGGGA 59.795 52.381 0.54 1.50 31.51 5.14
2433 4505 1.066929 TGATCGATGGATGCATACGGG 60.067 52.381 0.54 0.00 31.51 5.28
2434 4506 2.368655 TGATCGATGGATGCATACGG 57.631 50.000 0.54 0.00 31.51 4.02
2435 4507 3.928375 TGATTGATCGATGGATGCATACG 59.072 43.478 0.54 6.23 31.51 3.06
2436 4508 6.432607 AATGATTGATCGATGGATGCATAC 57.567 37.500 0.54 0.42 31.51 2.39
2437 4509 6.655848 TGAAATGATTGATCGATGGATGCATA 59.344 34.615 0.54 0.00 31.51 3.14
2438 4510 5.475564 TGAAATGATTGATCGATGGATGCAT 59.524 36.000 0.54 0.00 31.51 3.96
2439 4511 4.822896 TGAAATGATTGATCGATGGATGCA 59.177 37.500 0.54 0.00 31.51 3.96
2440 4512 5.366829 TGAAATGATTGATCGATGGATGC 57.633 39.130 0.54 0.00 31.51 3.91
2441 4513 7.027760 GGAATGAAATGATTGATCGATGGATG 58.972 38.462 0.54 0.00 31.51 3.51
2442 4514 6.717997 TGGAATGAAATGATTGATCGATGGAT 59.282 34.615 0.54 0.00 34.96 3.41
2443 4515 6.063404 TGGAATGAAATGATTGATCGATGGA 58.937 36.000 0.54 0.00 0.00 3.41
2444 4516 6.206048 TCTGGAATGAAATGATTGATCGATGG 59.794 38.462 0.54 0.00 0.00 3.51
2445 4517 7.041303 ACTCTGGAATGAAATGATTGATCGATG 60.041 37.037 0.54 0.00 0.00 3.84
2446 4518 6.996879 ACTCTGGAATGAAATGATTGATCGAT 59.003 34.615 0.00 0.00 0.00 3.59
2447 4519 6.351711 ACTCTGGAATGAAATGATTGATCGA 58.648 36.000 0.00 0.00 0.00 3.59
2448 4520 6.293298 GGACTCTGGAATGAAATGATTGATCG 60.293 42.308 0.00 0.00 0.00 3.69
2449 4521 6.544931 TGGACTCTGGAATGAAATGATTGATC 59.455 38.462 0.00 0.00 0.00 2.92
2450 4522 6.429151 TGGACTCTGGAATGAAATGATTGAT 58.571 36.000 0.00 0.00 0.00 2.57
2451 4523 5.818887 TGGACTCTGGAATGAAATGATTGA 58.181 37.500 0.00 0.00 0.00 2.57
2452 4524 5.884232 TCTGGACTCTGGAATGAAATGATTG 59.116 40.000 0.00 0.00 0.00 2.67
2453 4525 5.884792 GTCTGGACTCTGGAATGAAATGATT 59.115 40.000 0.00 0.00 0.00 2.57
2454 4526 5.435291 GTCTGGACTCTGGAATGAAATGAT 58.565 41.667 0.00 0.00 0.00 2.45
2455 4527 4.621510 CGTCTGGACTCTGGAATGAAATGA 60.622 45.833 0.00 0.00 0.00 2.57
2456 4528 3.620374 CGTCTGGACTCTGGAATGAAATG 59.380 47.826 0.00 0.00 0.00 2.32
2457 4529 3.369892 CCGTCTGGACTCTGGAATGAAAT 60.370 47.826 0.00 0.00 37.49 2.17
2458 4530 2.028112 CCGTCTGGACTCTGGAATGAAA 60.028 50.000 0.00 0.00 37.49 2.69
2459 4531 1.550524 CCGTCTGGACTCTGGAATGAA 59.449 52.381 0.00 0.00 37.49 2.57
2460 4532 1.186200 CCGTCTGGACTCTGGAATGA 58.814 55.000 0.00 0.00 37.49 2.57
2461 4533 0.460987 GCCGTCTGGACTCTGGAATG 60.461 60.000 0.00 0.00 37.49 2.67
2462 4534 1.901085 GCCGTCTGGACTCTGGAAT 59.099 57.895 0.00 0.00 37.49 3.01
2463 4535 2.636412 CGCCGTCTGGACTCTGGAA 61.636 63.158 0.00 0.00 37.49 3.53
2464 4536 3.062466 CGCCGTCTGGACTCTGGA 61.062 66.667 0.00 0.00 37.49 3.86
2465 4537 3.057547 CTCGCCGTCTGGACTCTGG 62.058 68.421 0.00 0.00 37.49 3.86
2466 4538 2.487428 CTCGCCGTCTGGACTCTG 59.513 66.667 0.00 0.00 37.49 3.35
2467 4539 3.444805 GCTCGCCGTCTGGACTCT 61.445 66.667 0.00 0.00 37.49 3.24
2468 4540 3.404141 GAGCTCGCCGTCTGGACTC 62.404 68.421 0.00 0.00 37.49 3.36
2469 4541 3.444805 GAGCTCGCCGTCTGGACT 61.445 66.667 0.00 0.00 37.49 3.85
2470 4542 4.838486 CGAGCTCGCCGTCTGGAC 62.838 72.222 25.07 0.00 37.49 4.02
2472 4544 3.815569 GATCGAGCTCGCCGTCTGG 62.816 68.421 30.97 2.71 39.60 3.86
2473 4545 2.352915 GATCGAGCTCGCCGTCTG 60.353 66.667 30.97 3.52 39.60 3.51
2474 4546 3.943034 CGATCGAGCTCGCCGTCT 61.943 66.667 30.97 12.41 39.60 4.18
2475 4547 4.965858 CCGATCGAGCTCGCCGTC 62.966 72.222 32.38 26.27 39.60 4.79
2480 4552 3.751401 TTTCGGCCGATCGAGCTCG 62.751 63.158 31.56 30.03 40.42 5.03
2481 4553 1.946650 CTTTCGGCCGATCGAGCTC 60.947 63.158 31.56 2.73 40.42 4.09
2482 4554 2.105128 CTTTCGGCCGATCGAGCT 59.895 61.111 31.56 0.00 40.42 4.09
2483 4555 2.901051 TTCCTTTCGGCCGATCGAGC 62.901 60.000 31.56 17.69 40.42 5.03
2484 4556 0.872021 CTTCCTTTCGGCCGATCGAG 60.872 60.000 31.56 24.78 40.42 4.04
2485 4557 1.141019 CTTCCTTTCGGCCGATCGA 59.859 57.895 31.56 21.03 37.38 3.59
2486 4558 1.883084 CCTTCCTTTCGGCCGATCG 60.883 63.158 31.56 21.97 0.00 3.69
2487 4559 2.180862 GCCTTCCTTTCGGCCGATC 61.181 63.158 31.56 7.02 40.43 3.69
2488 4560 2.124695 GCCTTCCTTTCGGCCGAT 60.125 61.111 31.56 0.00 40.43 4.18
2489 4561 4.752879 CGCCTTCCTTTCGGCCGA 62.753 66.667 27.28 27.28 43.38 5.54
2490 4562 4.752879 TCGCCTTCCTTTCGGCCG 62.753 66.667 22.12 22.12 43.38 6.13
2491 4563 3.125573 GTCGCCTTCCTTTCGGCC 61.126 66.667 0.00 0.00 43.38 6.13
2492 4564 3.488090 CGTCGCCTTCCTTTCGGC 61.488 66.667 0.00 0.00 42.86 5.54
2493 4565 2.048503 ACGTCGCCTTCCTTTCGG 60.049 61.111 0.00 0.00 0.00 4.30
2494 4566 3.011760 GCACGTCGCCTTCCTTTCG 62.012 63.158 0.00 0.00 32.94 3.46
2495 4567 2.861006 GCACGTCGCCTTCCTTTC 59.139 61.111 0.00 0.00 32.94 2.62
2496 4568 3.041940 CGCACGTCGCCTTCCTTT 61.042 61.111 0.00 0.00 37.30 3.11
2497 4569 4.295119 ACGCACGTCGCCTTCCTT 62.295 61.111 7.21 0.00 43.23 3.36
2506 4578 3.659089 ATACCCCAGCACGCACGTC 62.659 63.158 0.00 0.00 0.00 4.34
2507 4579 3.659089 GATACCCCAGCACGCACGT 62.659 63.158 0.00 0.00 0.00 4.49
2508 4580 2.890474 GATACCCCAGCACGCACG 60.890 66.667 0.00 0.00 0.00 5.34
2509 4581 1.153168 ATGATACCCCAGCACGCAC 60.153 57.895 0.00 0.00 0.00 5.34
2510 4582 1.146041 GATGATACCCCAGCACGCA 59.854 57.895 0.00 0.00 0.00 5.24
2511 4583 1.598130 GGATGATACCCCAGCACGC 60.598 63.158 0.00 0.00 0.00 5.34
2512 4584 1.300931 CGGATGATACCCCAGCACG 60.301 63.158 0.00 0.00 0.00 5.34
2513 4585 1.045407 TACGGATGATACCCCAGCAC 58.955 55.000 0.00 0.00 0.00 4.40
2514 4586 1.899814 GATACGGATGATACCCCAGCA 59.100 52.381 0.00 0.00 0.00 4.41
2515 4587 1.899814 TGATACGGATGATACCCCAGC 59.100 52.381 0.00 0.00 0.00 4.85
2516 4588 3.769300 TCATGATACGGATGATACCCCAG 59.231 47.826 0.00 0.00 0.00 4.45
2517 4589 3.785364 TCATGATACGGATGATACCCCA 58.215 45.455 0.00 0.00 0.00 4.96
2518 4590 4.819105 TTCATGATACGGATGATACCCC 57.181 45.455 0.00 0.00 29.96 4.95
2519 4591 4.935808 GGTTTCATGATACGGATGATACCC 59.064 45.833 9.76 0.00 42.03 3.69
2520 4592 5.794894 AGGTTTCATGATACGGATGATACC 58.205 41.667 9.76 12.03 45.31 2.73
2521 4593 5.869888 GGAGGTTTCATGATACGGATGATAC 59.130 44.000 9.76 0.00 33.47 2.24
2522 4594 5.336451 CGGAGGTTTCATGATACGGATGATA 60.336 44.000 9.76 0.00 29.96 2.15
2523 4595 4.561530 CGGAGGTTTCATGATACGGATGAT 60.562 45.833 9.76 0.00 29.96 2.45
2524 4596 3.243737 CGGAGGTTTCATGATACGGATGA 60.244 47.826 9.76 0.00 0.00 2.92
2525 4597 3.059884 CGGAGGTTTCATGATACGGATG 58.940 50.000 9.76 0.00 0.00 3.51
2526 4598 2.963101 TCGGAGGTTTCATGATACGGAT 59.037 45.455 9.76 0.00 0.00 4.18
2527 4599 2.100252 GTCGGAGGTTTCATGATACGGA 59.900 50.000 9.76 3.02 0.00 4.69
2528 4600 2.470821 GTCGGAGGTTTCATGATACGG 58.529 52.381 9.76 0.98 0.00 4.02
2529 4601 2.117137 CGTCGGAGGTTTCATGATACG 58.883 52.381 9.76 1.47 0.00 3.06
2530 4602 3.066342 TCTCGTCGGAGGTTTCATGATAC 59.934 47.826 7.69 7.69 40.85 2.24
2531 4603 3.284617 TCTCGTCGGAGGTTTCATGATA 58.715 45.455 0.00 0.00 40.85 2.15
2532 4604 2.100197 TCTCGTCGGAGGTTTCATGAT 58.900 47.619 0.00 0.00 40.85 2.45
2533 4605 1.541379 TCTCGTCGGAGGTTTCATGA 58.459 50.000 0.00 0.00 40.85 3.07
2534 4606 2.363788 TTCTCGTCGGAGGTTTCATG 57.636 50.000 0.00 0.00 40.85 3.07
2535 4607 3.064931 GTTTTCTCGTCGGAGGTTTCAT 58.935 45.455 0.00 0.00 40.85 2.57
2536 4608 2.101917 AGTTTTCTCGTCGGAGGTTTCA 59.898 45.455 0.00 0.00 40.85 2.69
2537 4609 2.752121 AGTTTTCTCGTCGGAGGTTTC 58.248 47.619 0.00 0.00 40.85 2.78
2538 4610 2.904697 AGTTTTCTCGTCGGAGGTTT 57.095 45.000 0.00 0.00 40.85 3.27
2539 4611 2.904697 AAGTTTTCTCGTCGGAGGTT 57.095 45.000 0.00 0.00 40.85 3.50
2540 4612 2.352519 GCTAAGTTTTCTCGTCGGAGGT 60.353 50.000 0.00 0.00 40.85 3.85
2541 4613 2.094649 AGCTAAGTTTTCTCGTCGGAGG 60.095 50.000 0.00 0.00 40.85 4.30
2542 4614 3.119779 AGAGCTAAGTTTTCTCGTCGGAG 60.120 47.826 0.00 0.00 41.89 4.63
2543 4615 2.818432 AGAGCTAAGTTTTCTCGTCGGA 59.182 45.455 0.00 0.00 32.42 4.55
2544 4616 3.219052 AGAGCTAAGTTTTCTCGTCGG 57.781 47.619 0.00 0.00 32.42 4.79
2545 4617 4.227538 TCAAGAGCTAAGTTTTCTCGTCG 58.772 43.478 0.00 0.00 32.42 5.12
2546 4618 5.864474 TGATCAAGAGCTAAGTTTTCTCGTC 59.136 40.000 0.00 0.00 32.42 4.20
2547 4619 5.784177 TGATCAAGAGCTAAGTTTTCTCGT 58.216 37.500 0.00 0.00 32.42 4.18
2548 4620 5.866633 ACTGATCAAGAGCTAAGTTTTCTCG 59.133 40.000 0.00 0.00 32.42 4.04
2549 4621 6.034470 CGACTGATCAAGAGCTAAGTTTTCTC 59.966 42.308 0.00 0.00 0.00 2.87
2550 4622 5.866633 CGACTGATCAAGAGCTAAGTTTTCT 59.133 40.000 0.00 0.00 0.00 2.52
2551 4623 5.864474 TCGACTGATCAAGAGCTAAGTTTTC 59.136 40.000 0.00 0.00 0.00 2.29
2552 4624 5.635700 GTCGACTGATCAAGAGCTAAGTTTT 59.364 40.000 8.70 0.00 0.00 2.43
2553 4625 5.164954 GTCGACTGATCAAGAGCTAAGTTT 58.835 41.667 8.70 0.00 0.00 2.66
2554 4626 4.381079 GGTCGACTGATCAAGAGCTAAGTT 60.381 45.833 16.46 0.00 0.00 2.66
2555 4627 3.129638 GGTCGACTGATCAAGAGCTAAGT 59.870 47.826 16.46 0.00 0.00 2.24
2556 4628 3.490078 GGGTCGACTGATCAAGAGCTAAG 60.490 52.174 16.46 0.12 0.00 2.18
2557 4629 2.427453 GGGTCGACTGATCAAGAGCTAA 59.573 50.000 16.46 0.00 0.00 3.09
2558 4630 2.025155 GGGTCGACTGATCAAGAGCTA 58.975 52.381 16.46 0.00 0.00 3.32
2559 4631 0.820871 GGGTCGACTGATCAAGAGCT 59.179 55.000 16.46 0.00 0.00 4.09
2560 4632 0.820871 AGGGTCGACTGATCAAGAGC 59.179 55.000 16.46 13.19 0.00 4.09
2561 4633 1.821753 ACAGGGTCGACTGATCAAGAG 59.178 52.381 16.46 0.00 40.97 2.85
2562 4634 1.924731 ACAGGGTCGACTGATCAAGA 58.075 50.000 16.46 0.00 40.97 3.02
2563 4635 3.017442 TCTACAGGGTCGACTGATCAAG 58.983 50.000 16.46 6.75 40.97 3.02
2564 4636 2.753452 GTCTACAGGGTCGACTGATCAA 59.247 50.000 16.46 0.00 40.97 2.57
2565 4637 2.026169 AGTCTACAGGGTCGACTGATCA 60.026 50.000 16.46 0.00 37.24 2.92
2566 4638 2.645802 AGTCTACAGGGTCGACTGATC 58.354 52.381 16.46 0.00 37.24 2.92
2567 4639 2.810870 AGTCTACAGGGTCGACTGAT 57.189 50.000 16.46 1.53 37.24 2.90
2568 4640 2.581216 AAGTCTACAGGGTCGACTGA 57.419 50.000 16.46 2.11 37.55 3.41
2569 4641 3.757493 ACTAAAGTCTACAGGGTCGACTG 59.243 47.826 16.46 9.45 37.55 3.51
2570 4642 3.757493 CACTAAAGTCTACAGGGTCGACT 59.243 47.826 16.46 0.00 39.66 4.18
2571 4643 3.119566 CCACTAAAGTCTACAGGGTCGAC 60.120 52.174 7.13 7.13 0.00 4.20
2572 4644 3.087031 CCACTAAAGTCTACAGGGTCGA 58.913 50.000 0.00 0.00 0.00 4.20
2573 4645 2.416972 GCCACTAAAGTCTACAGGGTCG 60.417 54.545 0.00 0.00 0.00 4.79
2574 4646 2.416972 CGCCACTAAAGTCTACAGGGTC 60.417 54.545 0.00 0.00 0.00 4.46
2575 4647 1.549170 CGCCACTAAAGTCTACAGGGT 59.451 52.381 0.00 0.00 0.00 4.34
2576 4648 1.549170 ACGCCACTAAAGTCTACAGGG 59.451 52.381 0.00 0.00 0.00 4.45
2577 4649 2.607187 CACGCCACTAAAGTCTACAGG 58.393 52.381 0.00 0.00 0.00 4.00
2578 4650 2.607187 CCACGCCACTAAAGTCTACAG 58.393 52.381 0.00 0.00 0.00 2.74
2579 4651 1.337447 GCCACGCCACTAAAGTCTACA 60.337 52.381 0.00 0.00 0.00 2.74
2580 4652 1.067071 AGCCACGCCACTAAAGTCTAC 60.067 52.381 0.00 0.00 0.00 2.59
2581 4653 1.203994 GAGCCACGCCACTAAAGTCTA 59.796 52.381 0.00 0.00 0.00 2.59
2582 4654 0.037232 GAGCCACGCCACTAAAGTCT 60.037 55.000 0.00 0.00 0.00 3.24
2583 4655 0.037232 AGAGCCACGCCACTAAAGTC 60.037 55.000 0.00 0.00 0.00 3.01
2584 4656 0.320771 CAGAGCCACGCCACTAAAGT 60.321 55.000 0.00 0.00 0.00 2.66
2585 4657 1.021390 CCAGAGCCACGCCACTAAAG 61.021 60.000 0.00 0.00 0.00 1.85
2586 4658 1.003839 CCAGAGCCACGCCACTAAA 60.004 57.895 0.00 0.00 0.00 1.85
2587 4659 2.662596 CCAGAGCCACGCCACTAA 59.337 61.111 0.00 0.00 0.00 2.24
2588 4660 4.082523 GCCAGAGCCACGCCACTA 62.083 66.667 0.00 0.00 0.00 2.74
2592 4664 3.605749 TTAGTGCCAGAGCCACGCC 62.606 63.158 0.00 0.00 38.69 5.68
2593 4665 2.047274 TTAGTGCCAGAGCCACGC 60.047 61.111 0.00 0.00 38.69 5.34
2594 4666 0.602638 TTGTTAGTGCCAGAGCCACG 60.603 55.000 0.00 0.00 38.69 4.94
2595 4667 1.537202 CTTTGTTAGTGCCAGAGCCAC 59.463 52.381 0.00 0.00 38.69 5.01
2596 4668 1.419762 TCTTTGTTAGTGCCAGAGCCA 59.580 47.619 0.00 0.00 38.69 4.75
2597 4669 1.807142 GTCTTTGTTAGTGCCAGAGCC 59.193 52.381 0.00 0.00 38.69 4.70
2598 4670 2.494059 TGTCTTTGTTAGTGCCAGAGC 58.506 47.619 0.00 0.00 40.48 4.09
2599 4671 4.067896 ACATGTCTTTGTTAGTGCCAGAG 58.932 43.478 0.00 0.00 0.00 3.35
2600 4672 3.814842 CACATGTCTTTGTTAGTGCCAGA 59.185 43.478 0.00 0.00 0.00 3.86
2601 4673 3.565482 ACACATGTCTTTGTTAGTGCCAG 59.435 43.478 0.00 0.00 0.00 4.85
2602 4674 3.550820 ACACATGTCTTTGTTAGTGCCA 58.449 40.909 0.00 0.00 0.00 4.92
2603 4675 4.513692 TGTACACATGTCTTTGTTAGTGCC 59.486 41.667 0.00 0.00 0.00 5.01
2604 4676 5.666969 TGTACACATGTCTTTGTTAGTGC 57.333 39.130 0.00 0.00 0.00 4.40
2605 4677 5.466728 AGCTGTACACATGTCTTTGTTAGTG 59.533 40.000 0.00 0.00 0.00 2.74
2606 4678 5.611374 AGCTGTACACATGTCTTTGTTAGT 58.389 37.500 0.00 0.00 0.00 2.24
2607 4679 6.868864 AGTAGCTGTACACATGTCTTTGTTAG 59.131 38.462 0.00 0.00 0.00 2.34
2608 4680 6.645003 CAGTAGCTGTACACATGTCTTTGTTA 59.355 38.462 0.00 0.00 0.00 2.41
2609 4681 5.466728 CAGTAGCTGTACACATGTCTTTGTT 59.533 40.000 0.00 0.00 0.00 2.83
2610 4682 4.991056 CAGTAGCTGTACACATGTCTTTGT 59.009 41.667 0.00 0.00 0.00 2.83
2611 4683 4.143030 GCAGTAGCTGTACACATGTCTTTG 60.143 45.833 0.00 0.00 37.91 2.77
2612 4684 3.997021 GCAGTAGCTGTACACATGTCTTT 59.003 43.478 0.00 0.00 37.91 2.52
2613 4685 3.589988 GCAGTAGCTGTACACATGTCTT 58.410 45.455 0.00 0.00 37.91 3.01
2614 4686 3.238108 GCAGTAGCTGTACACATGTCT 57.762 47.619 0.00 0.00 37.91 3.41
2639 4711 4.830765 TACTCCGGCGGTGCATGC 62.831 66.667 27.32 11.82 0.00 4.06
2640 4712 2.586079 CTACTCCGGCGGTGCATG 60.586 66.667 27.32 12.86 0.00 4.06
2641 4713 4.530857 GCTACTCCGGCGGTGCAT 62.531 66.667 27.32 11.09 0.00 3.96
2644 4716 4.814294 GTGGCTACTCCGGCGGTG 62.814 72.222 27.32 26.06 37.80 4.94
2647 4719 3.511595 TACGTGGCTACTCCGGCG 61.512 66.667 0.00 0.00 40.22 6.46
2648 4720 2.103736 GTACGTGGCTACTCCGGC 59.896 66.667 0.00 0.00 37.80 6.13
2649 4721 2.401766 ACGTACGTGGCTACTCCGG 61.402 63.158 22.14 0.00 37.80 5.14
2650 4722 1.226211 CACGTACGTGGCTACTCCG 60.226 63.158 35.09 11.03 42.00 4.63
2651 4723 1.515736 GCACGTACGTGGCTACTCC 60.516 63.158 40.17 23.13 45.49 3.85
2652 4724 0.797249 CAGCACGTACGTGGCTACTC 60.797 60.000 40.17 26.16 45.49 2.59
2653 4725 1.211969 CAGCACGTACGTGGCTACT 59.788 57.895 40.17 28.63 45.49 2.57
2654 4726 0.168788 TACAGCACGTACGTGGCTAC 59.831 55.000 40.17 27.12 45.49 3.58
2655 4727 0.168788 GTACAGCACGTACGTGGCTA 59.831 55.000 40.17 23.82 45.49 3.93
2656 4728 1.080974 GTACAGCACGTACGTGGCT 60.081 57.895 40.17 33.56 45.49 4.75
2657 4729 3.455685 GTACAGCACGTACGTGGC 58.544 61.111 40.17 32.24 45.49 5.01
2663 4735 0.665068 CACGGCAAGTACAGCACGTA 60.665 55.000 18.55 0.00 37.21 3.57
2664 4736 1.954146 CACGGCAAGTACAGCACGT 60.954 57.895 15.52 15.52 38.67 4.49
2665 4737 2.667318 CCACGGCAAGTACAGCACG 61.667 63.158 11.68 13.38 33.79 5.34
2666 4738 1.597027 ACCACGGCAAGTACAGCAC 60.597 57.895 11.68 1.95 0.00 4.40
2667 4739 1.596752 CACCACGGCAAGTACAGCA 60.597 57.895 11.68 0.00 0.00 4.41
2668 4740 1.301401 TCACCACGGCAAGTACAGC 60.301 57.895 0.00 0.00 0.00 4.40
2669 4741 1.282248 CGTCACCACGGCAAGTACAG 61.282 60.000 0.00 0.00 42.73 2.74
2670 4742 1.300311 CGTCACCACGGCAAGTACA 60.300 57.895 0.00 0.00 42.73 2.90
2671 4743 2.664436 GCGTCACCACGGCAAGTAC 61.664 63.158 0.00 0.00 46.80 2.73
2672 4744 2.356553 GCGTCACCACGGCAAGTA 60.357 61.111 0.00 0.00 46.80 2.24
2688 4760 3.302344 TTTTCCAGGCAAGCCCGC 61.302 61.111 7.62 0.00 39.21 6.13
2689 4761 2.650778 GTTTTCCAGGCAAGCCCG 59.349 61.111 7.62 0.00 39.21 6.13
2690 4762 2.931068 CGGTTTTCCAGGCAAGCCC 61.931 63.158 7.62 0.00 40.70 5.19
2691 4763 2.200337 ACGGTTTTCCAGGCAAGCC 61.200 57.895 2.02 2.02 40.70 4.35
2692 4764 1.007387 CACGGTTTTCCAGGCAAGC 60.007 57.895 0.00 0.00 40.70 4.01
2693 4765 1.007387 GCACGGTTTTCCAGGCAAG 60.007 57.895 0.00 0.00 40.70 4.01
2694 4766 2.494530 GGCACGGTTTTCCAGGCAA 61.495 57.895 0.00 0.00 39.47 4.52
2695 4767 2.909965 GGCACGGTTTTCCAGGCA 60.910 61.111 0.00 0.00 39.47 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.