Multiple sequence alignment - TraesCS7B01G070400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G070400 chr7B 100.000 4626 0 0 1 4626 77429167 77433792 0.000000e+00 8543.0
1 TraesCS7B01G070400 chr7B 99.130 1724 11 1 1057 2776 74100089 74101812 0.000000e+00 3097.0
2 TraesCS7B01G070400 chr7B 98.321 1727 17 4 1056 2780 501964333 501962617 0.000000e+00 3018.0
3 TraesCS7B01G070400 chr7B 86.813 364 39 6 1731 2086 501963479 501963117 9.330000e-107 398.0
4 TraesCS7B01G070400 chr7B 86.264 364 40 7 1731 2086 74100951 74101312 2.020000e-103 387.0
5 TraesCS7B01G070400 chr7B 99.333 150 1 0 846 995 577232775 577232626 5.900000e-69 272.0
6 TraesCS7B01G070400 chr7B 99.320 147 1 0 846 992 271250159 271250013 2.740000e-67 267.0
7 TraesCS7B01G070400 chr1B 98.837 1634 18 1 1144 2776 65602918 65604551 0.000000e+00 2911.0
8 TraesCS7B01G070400 chr1B 86.264 364 41 6 1731 2086 65603693 65604055 2.020000e-103 387.0
9 TraesCS7B01G070400 chr1B 97.917 96 1 1 1058 1152 65602923 65602828 1.030000e-36 165.0
10 TraesCS7B01G070400 chr1B 84.393 173 22 4 281 451 553893187 553893018 1.030000e-36 165.0
11 TraesCS7B01G070400 chr5A 99.192 1238 10 0 1057 2294 321000911 320999674 0.000000e+00 2231.0
12 TraesCS7B01G070400 chr5A 98.795 332 4 0 2445 2776 320999671 320999340 3.990000e-165 592.0
13 TraesCS7B01G070400 chr5A 78.522 866 116 43 2776 3626 663379161 663379971 5.340000e-139 505.0
14 TraesCS7B01G070400 chr5A 85.989 364 41 7 1731 2086 321000049 320999688 9.390000e-102 381.0
15 TraesCS7B01G070400 chr5A 81.122 196 33 4 3004 3197 436089407 436089600 2.230000e-33 154.0
16 TraesCS7B01G070400 chr4A 95.063 1195 28 4 1116 2280 676556641 676555448 0.000000e+00 1851.0
17 TraesCS7B01G070400 chr4A 93.939 1056 52 8 1731 2777 676555809 676554757 0.000000e+00 1585.0
18 TraesCS7B01G070400 chr4A 88.050 159 13 5 277 433 319821325 319821479 2.840000e-42 183.0
19 TraesCS7B01G070400 chr4A 100.000 39 0 0 1057 1095 676556680 676556642 6.420000e-09 73.1
20 TraesCS7B01G070400 chr7D 92.503 827 38 7 3011 3828 117245068 117245879 0.000000e+00 1162.0
21 TraesCS7B01G070400 chr7D 92.197 833 37 8 3798 4626 117245880 117246688 0.000000e+00 1153.0
22 TraesCS7B01G070400 chr7D 86.865 571 43 15 281 836 117242238 117242791 1.100000e-170 610.0
23 TraesCS7B01G070400 chr7D 85.022 227 23 6 207 432 117241986 117242202 2.170000e-53 220.0
24 TraesCS7B01G070400 chr7D 81.928 249 17 15 2776 3019 117242858 117243083 7.900000e-43 185.0
25 TraesCS7B01G070400 chr7D 86.923 130 4 3 94 210 117235138 117235267 2.900000e-27 134.0
26 TraesCS7B01G070400 chr7D 96.923 65 2 0 992 1056 117242804 117242868 4.890000e-20 110.0
27 TraesCS7B01G070400 chr7A 92.288 765 29 11 2919 3666 121398098 121398849 0.000000e+00 1059.0
28 TraesCS7B01G070400 chr7A 89.406 859 52 14 1 842 121397105 121397941 0.000000e+00 1046.0
29 TraesCS7B01G070400 chr7A 94.492 236 11 2 3798 4033 121401980 121402213 3.400000e-96 363.0
30 TraesCS7B01G070400 chr7A 93.671 158 7 1 3660 3814 121401802 121401959 2.780000e-57 233.0
31 TraesCS7B01G070400 chr7A 95.413 109 5 0 2776 2884 121397986 121398094 1.710000e-39 174.0
32 TraesCS7B01G070400 chr7A 86.364 154 9 6 277 428 676361431 676361574 1.720000e-34 158.0
33 TraesCS7B01G070400 chr7A 97.101 69 2 0 4021 4089 121402236 121402304 2.920000e-22 117.0
34 TraesCS7B01G070400 chr7A 98.438 64 1 0 993 1056 121397933 121397996 3.780000e-21 113.0
35 TraesCS7B01G070400 chr7A 81.955 133 22 2 4446 4577 121403373 121403504 1.360000e-20 111.0
36 TraesCS7B01G070400 chr2B 88.007 567 57 8 1732 2289 420733029 420732465 0.000000e+00 660.0
37 TraesCS7B01G070400 chr2B 87.857 560 55 7 1732 2289 420732641 420732093 0.000000e+00 645.0
38 TraesCS7B01G070400 chr2B 99.338 151 1 0 842 992 452597579 452597429 1.640000e-69 274.0
39 TraesCS7B01G070400 chr1D 86.995 569 60 9 1731 2289 11352228 11352792 3.040000e-176 628.0
40 TraesCS7B01G070400 chr4D 79.471 643 87 22 2990 3626 483369420 483370023 9.260000e-112 414.0
41 TraesCS7B01G070400 chr4D 82.619 443 54 16 2776 3214 483430622 483431045 2.030000e-98 370.0
42 TraesCS7B01G070400 chr4D 78.462 520 90 16 2992 3506 381404267 381403765 2.080000e-83 320.0
43 TraesCS7B01G070400 chr4D 86.667 90 8 2 3330 3418 483431127 483431213 3.810000e-16 97.1
44 TraesCS7B01G070400 chr4B 81.391 532 74 17 2990 3513 613754456 613753942 1.200000e-110 411.0
45 TraesCS7B01G070400 chr5B 98.710 155 2 0 842 996 602841828 602841674 4.560000e-70 276.0
46 TraesCS7B01G070400 chr5B 99.320 147 1 0 846 992 242138698 242138552 2.740000e-67 267.0
47 TraesCS7B01G070400 chr5B 80.102 196 35 4 3004 3197 391144969 391145162 4.820000e-30 143.0
48 TraesCS7B01G070400 chr1A 98.675 151 2 0 842 992 552838117 552838267 7.630000e-68 268.0
49 TraesCS7B01G070400 chr1A 98.667 150 2 0 843 992 45587268 45587417 2.740000e-67 267.0
50 TraesCS7B01G070400 chr1A 94.231 156 8 1 842 997 340411954 340411800 2.150000e-58 237.0
51 TraesCS7B01G070400 chr3B 94.872 156 6 2 837 992 40214094 40214247 4.620000e-60 243.0
52 TraesCS7B01G070400 chr6D 89.677 155 13 3 281 434 388209748 388209900 1.310000e-45 195.0
53 TraesCS7B01G070400 chr5D 87.821 156 14 4 281 434 462454798 462454646 1.320000e-40 178.0
54 TraesCS7B01G070400 chr2A 88.514 148 9 6 281 427 107183857 107183717 6.150000e-39 172.0
55 TraesCS7B01G070400 chr6B 85.714 154 12 6 281 434 716341257 716341400 2.230000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G070400 chr7B 77429167 77433792 4625 False 8543.000000 8543 100.000000 1 4626 1 chr7B.!!$F1 4625
1 TraesCS7B01G070400 chr7B 74100089 74101812 1723 False 1742.000000 3097 92.697000 1057 2776 2 chr7B.!!$F2 1719
2 TraesCS7B01G070400 chr7B 501962617 501964333 1716 True 1708.000000 3018 92.567000 1056 2780 2 chr7B.!!$R3 1724
3 TraesCS7B01G070400 chr1B 65602918 65604551 1633 False 1649.000000 2911 92.550500 1144 2776 2 chr1B.!!$F1 1632
4 TraesCS7B01G070400 chr5A 320999340 321000911 1571 True 1068.000000 2231 94.658667 1057 2776 3 chr5A.!!$R1 1719
5 TraesCS7B01G070400 chr5A 663379161 663379971 810 False 505.000000 505 78.522000 2776 3626 1 chr5A.!!$F2 850
6 TraesCS7B01G070400 chr4A 676554757 676556680 1923 True 1169.700000 1851 96.334000 1057 2777 3 chr4A.!!$R1 1720
7 TraesCS7B01G070400 chr7D 117241986 117246688 4702 False 573.333333 1162 89.239667 207 4626 6 chr7D.!!$F2 4419
8 TraesCS7B01G070400 chr7A 121397105 121403504 6399 False 402.000000 1059 92.845500 1 4577 8 chr7A.!!$F2 4576
9 TraesCS7B01G070400 chr2B 420732093 420733029 936 True 652.500000 660 87.932000 1732 2289 2 chr2B.!!$R2 557
10 TraesCS7B01G070400 chr1D 11352228 11352792 564 False 628.000000 628 86.995000 1731 2289 1 chr1D.!!$F1 558
11 TraesCS7B01G070400 chr4D 483369420 483370023 603 False 414.000000 414 79.471000 2990 3626 1 chr4D.!!$F1 636
12 TraesCS7B01G070400 chr4D 381403765 381404267 502 True 320.000000 320 78.462000 2992 3506 1 chr4D.!!$R1 514
13 TraesCS7B01G070400 chr4D 483430622 483431213 591 False 233.550000 370 84.643000 2776 3418 2 chr4D.!!$F2 642
14 TraesCS7B01G070400 chr4B 613753942 613754456 514 True 411.000000 411 81.391000 2990 3513 1 chr4B.!!$R1 523

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
874 1082 0.038618 CACACGACAAGGATGGACGA 60.039 55.0 0.00 0.00 35.53 4.20 F
952 1160 0.247814 CGTTCAATCAGCCATCGTGC 60.248 55.0 0.00 0.00 0.00 5.34 F
988 1196 0.319297 GTGTCGTTCGCCCAGTAGTT 60.319 55.0 0.00 0.00 0.00 2.24 F
989 1197 0.390124 TGTCGTTCGCCCAGTAGTTT 59.610 50.0 0.00 0.00 0.00 2.66 F
2872 3713 1.012086 CAGCGAGCTGGTACGTACTA 58.988 55.0 24.07 18.04 40.17 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2777 3601 1.079750 GTCCTCCTTGCTCGTCCAC 60.080 63.158 0.0 0.0 0.0 4.02 R
2947 3794 2.182030 GTCAACTCCCGCTCTCCG 59.818 66.667 0.0 0.0 0.0 4.63 R
2955 3802 0.517316 GTTCACATGCGTCAACTCCC 59.483 55.000 0.0 0.0 0.0 4.30 R
2959 3806 3.058983 TCATTCAGTTCACATGCGTCAAC 60.059 43.478 0.0 0.0 0.0 3.18 R
4170 10077 0.031817 AATTGGCAGGGATTGAGGGG 60.032 55.000 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 7.971201 AGAGCACCAATGATGATAAGAGATAA 58.029 34.615 0.00 0.00 0.00 1.75
71 72 4.483476 AAGTCATTAACTGTGCGGTTTC 57.517 40.909 1.46 0.00 38.58 2.78
90 91 6.291479 CGGTTTCTCGACGTTATTTAGAATCC 60.291 42.308 9.91 9.91 34.70 3.01
93 94 9.294030 GTTTCTCGACGTTATTTAGAATCCTAA 57.706 33.333 0.00 0.00 33.32 2.69
111 112 8.548880 AATCCTAAGTAGCATAGTTCAAGGTA 57.451 34.615 0.00 0.00 33.41 3.08
114 115 8.989131 TCCTAAGTAGCATAGTTCAAGGTATTT 58.011 33.333 0.00 0.00 33.41 1.40
136 137 2.666272 TGGGACAATACAGCCAACAA 57.334 45.000 0.00 0.00 31.92 2.83
137 138 3.168035 TGGGACAATACAGCCAACAAT 57.832 42.857 0.00 0.00 31.92 2.71
138 139 3.505386 TGGGACAATACAGCCAACAATT 58.495 40.909 0.00 0.00 31.92 2.32
139 140 3.509575 TGGGACAATACAGCCAACAATTC 59.490 43.478 0.00 0.00 31.92 2.17
156 167 6.827586 ACAATTCCGCCTAAATCTTAACAA 57.172 33.333 0.00 0.00 0.00 2.83
165 176 6.590292 CGCCTAAATCTTAACAAAGAGTCTCA 59.410 38.462 1.94 0.00 31.48 3.27
166 177 7.412020 CGCCTAAATCTTAACAAAGAGTCTCAC 60.412 40.741 1.94 0.00 31.48 3.51
201 214 5.582665 AGAAGAGTCGATTGCATTTTCTACC 59.417 40.000 0.00 0.00 0.00 3.18
204 217 5.582665 AGAGTCGATTGCATTTTCTACCTTC 59.417 40.000 0.00 0.00 0.00 3.46
225 238 6.373216 CCTTCCACGTCAAAAATTATCCTACA 59.627 38.462 0.00 0.00 0.00 2.74
263 276 7.429636 AGTTGGCGTGCGTATTTATAATATT 57.570 32.000 0.00 0.00 0.00 1.28
347 361 7.093354 TCAAGTGACATAACATCAAGAGAGAC 58.907 38.462 0.00 0.00 0.00 3.36
356 370 9.823098 CATAACATCAAGAGAGACAAAGAAAAG 57.177 33.333 0.00 0.00 0.00 2.27
359 373 8.511604 ACATCAAGAGAGACAAAGAAAAGAAA 57.488 30.769 0.00 0.00 0.00 2.52
360 374 8.401709 ACATCAAGAGAGACAAAGAAAAGAAAC 58.598 33.333 0.00 0.00 0.00 2.78
361 375 8.619546 CATCAAGAGAGACAAAGAAAAGAAACT 58.380 33.333 0.00 0.00 0.00 2.66
362 376 7.978982 TCAAGAGAGACAAAGAAAAGAAACTG 58.021 34.615 0.00 0.00 0.00 3.16
364 378 8.454106 CAAGAGAGACAAAGAAAAGAAACTGAA 58.546 33.333 0.00 0.00 0.00 3.02
365 379 8.207521 AGAGAGACAAAGAAAAGAAACTGAAG 57.792 34.615 0.00 0.00 0.00 3.02
366 380 8.043710 AGAGAGACAAAGAAAAGAAACTGAAGA 58.956 33.333 0.00 0.00 0.00 2.87
367 381 8.744568 AGAGACAAAGAAAAGAAACTGAAGAT 57.255 30.769 0.00 0.00 0.00 2.40
368 382 9.183368 AGAGACAAAGAAAAGAAACTGAAGATT 57.817 29.630 0.00 0.00 0.00 2.40
369 383 9.794685 GAGACAAAGAAAAGAAACTGAAGATTT 57.205 29.630 0.00 0.00 0.00 2.17
401 594 4.618912 CACGGATCTTAATGTATGAGCTCG 59.381 45.833 9.64 0.00 0.00 5.03
418 611 1.398739 CTCGCGGATATAGCATCGACT 59.601 52.381 6.13 0.00 34.19 4.18
434 627 4.143194 TCGACTGAGACTTAACGAAGTG 57.857 45.455 0.00 0.00 46.23 3.16
435 628 3.811497 TCGACTGAGACTTAACGAAGTGA 59.189 43.478 0.00 0.00 46.23 3.41
436 629 4.083961 TCGACTGAGACTTAACGAAGTGAG 60.084 45.833 0.00 0.00 46.23 3.51
486 689 3.381590 GCAATGGAGGGAGTAATGTTTCC 59.618 47.826 0.00 0.00 0.00 3.13
554 757 7.864108 AGAAATATGACATCGAATTTGGACA 57.136 32.000 0.00 0.00 0.00 4.02
557 760 7.864108 AATATGACATCGAATTTGGACAGAA 57.136 32.000 0.00 0.00 0.00 3.02
567 770 4.627611 ATTTGGACAGAAATCATCGCTG 57.372 40.909 0.00 0.00 35.81 5.18
589 792 1.548719 TGCCAGCGATATATAACGGCT 59.451 47.619 13.45 8.51 0.00 5.52
591 794 2.416836 GCCAGCGATATATAACGGCTGA 60.417 50.000 24.39 0.00 36.55 4.26
639 842 4.023137 ATGCACACATGGAAGCCC 57.977 55.556 0.00 0.00 34.35 5.19
675 880 5.163141 TGGTCCATCTAACACTTTGAGGAAA 60.163 40.000 0.00 0.00 0.00 3.13
676 881 5.412904 GGTCCATCTAACACTTTGAGGAAAG 59.587 44.000 0.00 0.00 43.79 2.62
683 888 2.633860 CTTTGAGGAAAGTGCCGCT 58.366 52.632 0.00 0.00 34.86 5.52
684 889 0.519077 CTTTGAGGAAAGTGCCGCTC 59.481 55.000 0.00 0.00 34.86 5.03
686 891 2.436824 GAGGAAAGTGCCGCTCCC 60.437 66.667 0.00 0.00 0.00 4.30
688 893 4.388499 GGAAAGTGCCGCTCCCGA 62.388 66.667 0.00 0.00 36.29 5.14
700 905 2.123208 TCCCGATGGCCGTGGATA 60.123 61.111 8.81 0.00 34.31 2.59
771 977 1.172508 AAATACCCCAACCACCCCTT 58.827 50.000 0.00 0.00 0.00 3.95
838 1046 5.656859 CGAGATAGAGATAGAGGGAGAGAGA 59.343 48.000 0.00 0.00 0.00 3.10
840 1048 5.966935 AGATAGAGATAGAGGGAGAGAGAGG 59.033 48.000 0.00 0.00 0.00 3.69
841 1049 4.228237 AGAGATAGAGGGAGAGAGAGGA 57.772 50.000 0.00 0.00 0.00 3.71
842 1050 4.171234 AGAGATAGAGGGAGAGAGAGGAG 58.829 52.174 0.00 0.00 0.00 3.69
843 1051 4.140447 AGAGATAGAGGGAGAGAGAGGAGA 60.140 50.000 0.00 0.00 0.00 3.71
844 1052 4.171234 AGATAGAGGGAGAGAGAGGAGAG 58.829 52.174 0.00 0.00 0.00 3.20
845 1053 0.846693 AGAGGGAGAGAGAGGAGAGC 59.153 60.000 0.00 0.00 0.00 4.09
846 1054 0.535102 GAGGGAGAGAGAGGAGAGCG 60.535 65.000 0.00 0.00 0.00 5.03
847 1055 2.193536 GGGAGAGAGAGGAGAGCGC 61.194 68.421 0.00 0.00 0.00 5.92
848 1056 1.152963 GGAGAGAGAGGAGAGCGCT 60.153 63.158 11.27 11.27 0.00 5.92
849 1057 1.447317 GGAGAGAGAGGAGAGCGCTG 61.447 65.000 18.48 0.00 0.00 5.18
850 1058 2.063541 GAGAGAGAGGAGAGCGCTGC 62.064 65.000 18.48 6.46 0.00 5.25
851 1059 2.044053 AGAGAGGAGAGCGCTGCT 60.044 61.111 18.48 12.06 46.36 4.24
852 1060 0.817634 GAGAGAGGAGAGCGCTGCTA 60.818 60.000 18.48 0.00 43.46 3.49
853 1061 0.178992 AGAGAGGAGAGCGCTGCTAT 60.179 55.000 18.48 8.96 43.46 2.97
854 1062 1.073125 AGAGAGGAGAGCGCTGCTATA 59.927 52.381 18.48 0.00 43.46 1.31
855 1063 1.199097 GAGAGGAGAGCGCTGCTATAC 59.801 57.143 18.48 0.00 43.46 1.47
856 1064 0.955178 GAGGAGAGCGCTGCTATACA 59.045 55.000 18.48 0.00 43.46 2.29
857 1065 0.671251 AGGAGAGCGCTGCTATACAC 59.329 55.000 18.48 0.00 41.43 2.90
858 1066 0.385751 GGAGAGCGCTGCTATACACA 59.614 55.000 18.48 0.00 39.88 3.72
859 1067 1.482278 GAGAGCGCTGCTATACACAC 58.518 55.000 18.48 0.00 39.88 3.82
860 1068 0.248661 AGAGCGCTGCTATACACACG 60.249 55.000 18.48 0.00 39.88 4.49
861 1069 0.248498 GAGCGCTGCTATACACACGA 60.248 55.000 18.48 0.00 39.88 4.35
862 1070 0.525668 AGCGCTGCTATACACACGAC 60.526 55.000 10.39 0.00 36.99 4.34
863 1071 0.800683 GCGCTGCTATACACACGACA 60.801 55.000 0.00 0.00 0.00 4.35
864 1072 1.624487 CGCTGCTATACACACGACAA 58.376 50.000 0.00 0.00 0.00 3.18
865 1073 1.583856 CGCTGCTATACACACGACAAG 59.416 52.381 0.00 0.00 0.00 3.16
866 1074 1.927174 GCTGCTATACACACGACAAGG 59.073 52.381 0.00 0.00 0.00 3.61
867 1075 2.416836 GCTGCTATACACACGACAAGGA 60.417 50.000 0.00 0.00 0.00 3.36
868 1076 3.738281 GCTGCTATACACACGACAAGGAT 60.738 47.826 0.00 0.00 0.00 3.24
869 1077 3.780902 TGCTATACACACGACAAGGATG 58.219 45.455 0.00 0.00 0.00 3.51
870 1078 3.123804 GCTATACACACGACAAGGATGG 58.876 50.000 0.00 0.00 0.00 3.51
871 1079 3.181479 GCTATACACACGACAAGGATGGA 60.181 47.826 0.00 0.00 0.00 3.41
872 1080 2.736144 TACACACGACAAGGATGGAC 57.264 50.000 0.00 0.00 0.00 4.02
873 1081 0.319555 ACACACGACAAGGATGGACG 60.320 55.000 0.00 0.00 36.83 4.79
874 1082 0.038618 CACACGACAAGGATGGACGA 60.039 55.000 0.00 0.00 35.53 4.20
875 1083 0.895530 ACACGACAAGGATGGACGAT 59.104 50.000 0.00 0.00 35.53 3.73
876 1084 1.275291 ACACGACAAGGATGGACGATT 59.725 47.619 0.00 0.00 35.53 3.34
877 1085 2.289444 ACACGACAAGGATGGACGATTT 60.289 45.455 0.00 0.00 35.53 2.17
878 1086 3.056393 ACACGACAAGGATGGACGATTTA 60.056 43.478 0.00 0.00 35.53 1.40
879 1087 3.306166 CACGACAAGGATGGACGATTTAC 59.694 47.826 0.00 0.00 35.53 2.01
880 1088 3.056393 ACGACAAGGATGGACGATTTACA 60.056 43.478 0.00 0.00 35.53 2.41
881 1089 3.306166 CGACAAGGATGGACGATTTACAC 59.694 47.826 0.00 0.00 34.21 2.90
882 1090 4.250464 GACAAGGATGGACGATTTACACA 58.750 43.478 0.00 0.00 0.00 3.72
883 1091 4.000988 ACAAGGATGGACGATTTACACAC 58.999 43.478 0.00 0.00 0.00 3.82
884 1092 2.888594 AGGATGGACGATTTACACACG 58.111 47.619 0.00 0.00 0.00 4.49
885 1093 2.494471 AGGATGGACGATTTACACACGA 59.506 45.455 0.00 0.00 0.00 4.35
886 1094 3.132289 AGGATGGACGATTTACACACGAT 59.868 43.478 0.00 0.00 0.00 3.73
887 1095 3.245284 GGATGGACGATTTACACACGATG 59.755 47.826 0.00 0.00 0.00 3.84
888 1096 1.996898 TGGACGATTTACACACGATGC 59.003 47.619 0.00 0.00 0.00 3.91
889 1097 2.268298 GGACGATTTACACACGATGCT 58.732 47.619 0.00 0.00 0.00 3.79
890 1098 3.119424 TGGACGATTTACACACGATGCTA 60.119 43.478 0.00 0.00 0.00 3.49
891 1099 3.242248 GGACGATTTACACACGATGCTAC 59.758 47.826 0.00 0.00 0.00 3.58
892 1100 3.184541 ACGATTTACACACGATGCTACC 58.815 45.455 0.00 0.00 0.00 3.18
893 1101 2.538449 CGATTTACACACGATGCTACCC 59.462 50.000 0.00 0.00 0.00 3.69
894 1102 3.527533 GATTTACACACGATGCTACCCA 58.472 45.455 0.00 0.00 0.00 4.51
895 1103 3.620427 TTTACACACGATGCTACCCAT 57.380 42.857 0.00 0.00 36.70 4.00
896 1104 2.882927 TACACACGATGCTACCCATC 57.117 50.000 0.00 0.00 45.58 3.51
904 1112 2.604046 ATGCTACCCATCAAGACGTC 57.396 50.000 7.70 7.70 0.00 4.34
905 1113 0.535335 TGCTACCCATCAAGACGTCC 59.465 55.000 13.01 0.00 0.00 4.79
906 1114 0.535335 GCTACCCATCAAGACGTCCA 59.465 55.000 13.01 0.00 0.00 4.02
907 1115 1.139058 GCTACCCATCAAGACGTCCAT 59.861 52.381 13.01 0.00 0.00 3.41
908 1116 2.420129 GCTACCCATCAAGACGTCCATT 60.420 50.000 13.01 0.00 0.00 3.16
909 1117 2.879103 ACCCATCAAGACGTCCATTT 57.121 45.000 13.01 0.00 0.00 2.32
910 1118 3.992943 ACCCATCAAGACGTCCATTTA 57.007 42.857 13.01 0.00 0.00 1.40
911 1119 3.606687 ACCCATCAAGACGTCCATTTAC 58.393 45.455 13.01 0.00 0.00 2.01
912 1120 3.008594 ACCCATCAAGACGTCCATTTACA 59.991 43.478 13.01 0.00 0.00 2.41
913 1121 3.374058 CCCATCAAGACGTCCATTTACAC 59.626 47.826 13.01 0.00 0.00 2.90
914 1122 4.000325 CCATCAAGACGTCCATTTACACA 59.000 43.478 13.01 0.00 0.00 3.72
915 1123 4.454161 CCATCAAGACGTCCATTTACACAA 59.546 41.667 13.01 0.00 0.00 3.33
916 1124 5.390885 CCATCAAGACGTCCATTTACACAAG 60.391 44.000 13.01 0.00 0.00 3.16
917 1125 4.951254 TCAAGACGTCCATTTACACAAGA 58.049 39.130 13.01 0.00 0.00 3.02
918 1126 5.547465 TCAAGACGTCCATTTACACAAGAT 58.453 37.500 13.01 0.00 0.00 2.40
919 1127 5.408299 TCAAGACGTCCATTTACACAAGATG 59.592 40.000 13.01 0.00 0.00 2.90
920 1128 4.894784 AGACGTCCATTTACACAAGATGT 58.105 39.130 13.01 0.00 46.06 3.06
921 1129 6.032956 AGACGTCCATTTACACAAGATGTA 57.967 37.500 13.01 0.00 43.19 2.29
922 1130 5.867716 AGACGTCCATTTACACAAGATGTAC 59.132 40.000 13.01 0.00 43.71 2.90
923 1131 5.790593 ACGTCCATTTACACAAGATGTACT 58.209 37.500 0.00 0.00 43.71 2.73
924 1132 5.637810 ACGTCCATTTACACAAGATGTACTG 59.362 40.000 0.00 0.00 43.71 2.74
925 1133 5.637810 CGTCCATTTACACAAGATGTACTGT 59.362 40.000 0.00 0.00 43.71 3.55
926 1134 6.809689 CGTCCATTTACACAAGATGTACTGTA 59.190 38.462 0.00 0.00 43.71 2.74
927 1135 7.491372 CGTCCATTTACACAAGATGTACTGTAT 59.509 37.037 0.00 0.00 43.71 2.29
928 1136 8.818057 GTCCATTTACACAAGATGTACTGTATC 58.182 37.037 0.00 0.00 43.71 2.24
929 1137 8.536175 TCCATTTACACAAGATGTACTGTATCA 58.464 33.333 0.00 0.00 43.71 2.15
930 1138 9.161629 CCATTTACACAAGATGTACTGTATCAA 57.838 33.333 0.00 0.00 43.71 2.57
932 1140 7.827819 TTACACAAGATGTACTGTATCAAGC 57.172 36.000 0.00 0.00 43.71 4.01
933 1141 5.178797 ACACAAGATGTACTGTATCAAGCC 58.821 41.667 0.00 0.00 40.88 4.35
934 1142 4.268644 CACAAGATGTACTGTATCAAGCCG 59.731 45.833 0.00 0.00 0.00 5.52
935 1143 4.081642 ACAAGATGTACTGTATCAAGCCGT 60.082 41.667 0.00 0.00 0.00 5.68
936 1144 4.737855 AGATGTACTGTATCAAGCCGTT 57.262 40.909 0.00 0.00 0.00 4.44
937 1145 4.683832 AGATGTACTGTATCAAGCCGTTC 58.316 43.478 0.00 0.00 0.00 3.95
938 1146 3.945981 TGTACTGTATCAAGCCGTTCA 57.054 42.857 0.00 0.00 0.00 3.18
939 1147 4.260139 TGTACTGTATCAAGCCGTTCAA 57.740 40.909 0.00 0.00 0.00 2.69
940 1148 4.827692 TGTACTGTATCAAGCCGTTCAAT 58.172 39.130 0.00 0.00 0.00 2.57
941 1149 4.868171 TGTACTGTATCAAGCCGTTCAATC 59.132 41.667 0.00 0.00 0.00 2.67
942 1150 3.937814 ACTGTATCAAGCCGTTCAATCA 58.062 40.909 0.00 0.00 0.00 2.57
943 1151 3.935203 ACTGTATCAAGCCGTTCAATCAG 59.065 43.478 0.00 0.00 0.00 2.90
944 1152 2.677836 TGTATCAAGCCGTTCAATCAGC 59.322 45.455 0.00 0.00 0.00 4.26
945 1153 1.098050 ATCAAGCCGTTCAATCAGCC 58.902 50.000 0.00 0.00 0.00 4.85
946 1154 0.250684 TCAAGCCGTTCAATCAGCCA 60.251 50.000 0.00 0.00 0.00 4.75
947 1155 0.813184 CAAGCCGTTCAATCAGCCAT 59.187 50.000 0.00 0.00 0.00 4.40
948 1156 1.098050 AAGCCGTTCAATCAGCCATC 58.902 50.000 0.00 0.00 0.00 3.51
949 1157 1.091771 AGCCGTTCAATCAGCCATCG 61.092 55.000 0.00 0.00 0.00 3.84
950 1158 1.369091 GCCGTTCAATCAGCCATCGT 61.369 55.000 0.00 0.00 0.00 3.73
951 1159 0.374758 CCGTTCAATCAGCCATCGTG 59.625 55.000 0.00 0.00 0.00 4.35
952 1160 0.247814 CGTTCAATCAGCCATCGTGC 60.248 55.000 0.00 0.00 0.00 5.34
953 1161 0.804364 GTTCAATCAGCCATCGTGCA 59.196 50.000 0.00 0.00 0.00 4.57
954 1162 1.402968 GTTCAATCAGCCATCGTGCAT 59.597 47.619 0.00 0.00 0.00 3.96
955 1163 1.018910 TCAATCAGCCATCGTGCATG 58.981 50.000 0.00 0.00 0.00 4.06
961 1169 3.101209 CCATCGTGCATGGTTCGG 58.899 61.111 5.98 0.00 46.72 4.30
962 1170 2.404789 CATCGTGCATGGTTCGGC 59.595 61.111 5.98 0.00 0.00 5.54
963 1171 2.824041 ATCGTGCATGGTTCGGCC 60.824 61.111 5.98 0.00 37.90 6.13
982 1190 4.980805 GGCAGTGTCGTTCGCCCA 62.981 66.667 0.00 0.00 38.67 5.36
983 1191 3.414700 GCAGTGTCGTTCGCCCAG 61.415 66.667 0.00 0.00 0.00 4.45
984 1192 2.029073 CAGTGTCGTTCGCCCAGT 59.971 61.111 0.00 0.00 0.00 4.00
985 1193 1.287815 CAGTGTCGTTCGCCCAGTA 59.712 57.895 0.00 0.00 0.00 2.74
986 1194 0.732880 CAGTGTCGTTCGCCCAGTAG 60.733 60.000 0.00 0.00 0.00 2.57
987 1195 1.177256 AGTGTCGTTCGCCCAGTAGT 61.177 55.000 0.00 0.00 0.00 2.73
988 1196 0.319297 GTGTCGTTCGCCCAGTAGTT 60.319 55.000 0.00 0.00 0.00 2.24
989 1197 0.390124 TGTCGTTCGCCCAGTAGTTT 59.610 50.000 0.00 0.00 0.00 2.66
990 1198 1.066136 GTCGTTCGCCCAGTAGTTTC 58.934 55.000 0.00 0.00 0.00 2.78
1045 1253 3.330720 AAGGGGTGAAGCGAGGGG 61.331 66.667 0.00 0.00 0.00 4.79
1861 2098 6.374417 AGTCCTTCATGTAGGTACACAAAT 57.626 37.500 17.07 0.00 39.30 2.32
2451 3271 5.988287 TGGCCAGAAAGAAAGTTTCATTTT 58.012 33.333 17.65 9.99 0.00 1.82
2777 3601 4.264614 CGGTTAGTAATAGCCATATTCGCG 59.735 45.833 0.00 0.00 33.58 5.87
2872 3713 1.012086 CAGCGAGCTGGTACGTACTA 58.988 55.000 24.07 18.04 40.17 1.82
2885 3726 6.671190 TGGTACGTACTAATCCATCGTAATG 58.329 40.000 24.07 0.00 38.39 1.90
2886 3727 6.486320 TGGTACGTACTAATCCATCGTAATGA 59.514 38.462 24.07 0.00 38.39 2.57
2901 3742 5.618056 CGTAATGACGTAATCCCTAGCTA 57.382 43.478 0.00 0.00 44.31 3.32
2903 3744 4.522722 AATGACGTAATCCCTAGCTAGC 57.477 45.455 15.74 6.62 0.00 3.42
2904 3745 2.236766 TGACGTAATCCCTAGCTAGCC 58.763 52.381 15.74 0.00 0.00 3.93
2906 3747 2.826725 GACGTAATCCCTAGCTAGCCAT 59.173 50.000 15.74 6.07 0.00 4.40
2908 3749 4.611367 ACGTAATCCCTAGCTAGCCATAT 58.389 43.478 15.74 2.75 0.00 1.78
2911 3752 5.593095 CGTAATCCCTAGCTAGCCATATACA 59.407 44.000 15.74 0.00 0.00 2.29
2912 3753 5.941555 AATCCCTAGCTAGCCATATACAC 57.058 43.478 15.74 0.00 0.00 2.90
2913 3754 4.397919 TCCCTAGCTAGCCATATACACA 57.602 45.455 15.74 0.00 0.00 3.72
2914 3755 4.344978 TCCCTAGCTAGCCATATACACAG 58.655 47.826 15.74 0.00 0.00 3.66
2915 3756 3.449018 CCCTAGCTAGCCATATACACAGG 59.551 52.174 15.74 2.71 0.00 4.00
2925 3767 3.960755 CCATATACACAGGACCACTCTGA 59.039 47.826 0.00 0.00 36.22 3.27
2938 3781 4.712476 ACCACTCTGATTCTATCAATGGC 58.288 43.478 11.37 0.00 39.04 4.40
2947 3794 1.069204 TCTATCAATGGCGAGCTGGAC 59.931 52.381 0.00 0.00 0.00 4.02
2949 3796 2.930385 ATCAATGGCGAGCTGGACGG 62.930 60.000 0.00 0.00 0.00 4.79
2951 3798 3.376935 AATGGCGAGCTGGACGGAG 62.377 63.158 0.00 0.00 0.00 4.63
2953 3800 4.200283 GGCGAGCTGGACGGAGAG 62.200 72.222 0.00 0.00 0.00 3.20
2955 3802 4.544689 CGAGCTGGACGGAGAGCG 62.545 72.222 0.00 0.00 40.34 5.03
2959 3806 3.522731 CTGGACGGAGAGCGGGAG 61.523 72.222 0.00 0.00 0.00 4.30
2960 3807 4.361971 TGGACGGAGAGCGGGAGT 62.362 66.667 0.00 0.00 0.00 3.85
2971 3818 3.168271 CGGGAGTTGACGCATGTG 58.832 61.111 4.30 4.30 0.00 3.21
3300 6146 3.349006 CGCAGGAAACGCAGCTGT 61.349 61.111 16.64 0.00 0.00 4.40
3571 6438 2.435059 GACGTGAGAGCCTTGGCC 60.435 66.667 8.17 0.00 0.00 5.36
3651 6518 1.401905 CTCTCACACGTGATCGATCCA 59.598 52.381 25.01 8.09 39.13 3.41
3696 9527 1.619526 CCGCTGCACGTACGCTTTTA 61.620 55.000 16.72 0.00 41.42 1.52
3731 9562 5.666462 TGTATGTGTACTTGAACAGTGTGT 58.334 37.500 0.00 0.00 35.97 3.72
3745 9576 5.773239 ACAGTGTGTATACGTACAAATGC 57.227 39.130 0.00 0.00 42.18 3.56
3843 9714 9.239002 CATATGTAAACGTGGTTTTGAGAAAAA 57.761 29.630 0.00 0.00 37.01 1.94
3944 9816 3.553508 GGTGGAGACGTACTTTGCAGTAA 60.554 47.826 0.00 0.00 37.24 2.24
4071 9978 1.154150 GCAAGCATCTCAACCGTGC 60.154 57.895 0.00 0.00 39.10 5.34
4090 9997 3.687572 GCAAGAAGATGAATCGTGCAT 57.312 42.857 9.07 0.00 46.88 3.96
4091 9998 4.025015 GCAAGAAGATGAATCGTGCATT 57.975 40.909 9.07 0.00 46.88 3.56
4093 10000 4.269312 CAAGAAGATGAATCGTGCATTCG 58.731 43.478 0.00 0.00 43.71 3.34
4095 10002 3.308053 AGAAGATGAATCGTGCATTCGTG 59.692 43.478 0.00 0.00 43.71 4.35
4098 10005 0.721154 TGAATCGTGCATTCGTGCTC 59.279 50.000 0.00 0.00 43.71 4.26
4099 10006 0.026803 GAATCGTGCATTCGTGCTCC 59.973 55.000 0.00 0.00 31.66 4.70
4100 10007 1.369091 AATCGTGCATTCGTGCTCCC 61.369 55.000 0.00 0.00 35.49 4.30
4101 10008 3.499737 CGTGCATTCGTGCTCCCC 61.500 66.667 0.00 0.00 35.49 4.81
4102 10009 3.134127 GTGCATTCGTGCTCCCCC 61.134 66.667 0.00 0.00 35.49 5.40
4106 10013 1.686325 GCATTCGTGCTCCCCCTCTA 61.686 60.000 0.00 0.00 0.00 2.43
4108 10015 1.417890 CATTCGTGCTCCCCCTCTATT 59.582 52.381 0.00 0.00 0.00 1.73
4109 10016 2.464796 TTCGTGCTCCCCCTCTATTA 57.535 50.000 0.00 0.00 0.00 0.98
4110 10017 1.996798 TCGTGCTCCCCCTCTATTAG 58.003 55.000 0.00 0.00 0.00 1.73
4164 10071 3.922375 AGAAGAGGATCGGAGAGGATTT 58.078 45.455 0.00 0.00 43.63 2.17
4165 10072 5.068215 AGAAGAGGATCGGAGAGGATTTA 57.932 43.478 0.00 0.00 43.63 1.40
4166 10073 5.459505 AGAAGAGGATCGGAGAGGATTTAA 58.540 41.667 0.00 0.00 43.63 1.52
4167 10074 6.081356 AGAAGAGGATCGGAGAGGATTTAAT 58.919 40.000 0.00 0.00 43.63 1.40
4170 10077 6.282034 AGAGGATCGGAGAGGATTTAATCCC 61.282 48.000 19.34 11.44 46.28 3.85
4209 10116 2.997980 TCCTTGTCAACTGAACAAGCA 58.002 42.857 9.86 0.00 39.42 3.91
4221 10128 2.819608 TGAACAAGCACTCAAATAGGCC 59.180 45.455 0.00 0.00 0.00 5.19
4227 10134 1.307517 ACTCAAATAGGCCCCCGGA 60.308 57.895 0.73 0.00 0.00 5.14
4253 10160 4.886163 TGGTCCAATATACTCCTACACCA 58.114 43.478 0.00 0.00 0.00 4.17
4270 10177 3.448301 ACACCAATGCAACCTCCATAATG 59.552 43.478 0.00 0.00 0.00 1.90
4325 10234 5.691754 GCAAAGGGTCATACAAACAGAAAAG 59.308 40.000 0.00 0.00 0.00 2.27
4338 10247 0.037232 AGAAAAGGAAGGAGGCGTCG 60.037 55.000 0.00 0.00 0.00 5.12
4339 10248 0.037605 GAAAAGGAAGGAGGCGTCGA 60.038 55.000 0.00 0.00 0.00 4.20
4356 10265 1.741770 GAGCGACTCGGTTGGCATT 60.742 57.895 4.35 0.00 37.83 3.56
4365 10274 0.314935 CGGTTGGCATTGAAGCTTGT 59.685 50.000 2.10 0.00 34.17 3.16
4375 10284 3.641437 TTGAAGCTTGTCAAAATCCCG 57.359 42.857 2.10 0.00 34.59 5.14
4412 10321 0.112412 ACCAAAACGGCCAGGAATCT 59.888 50.000 2.24 0.00 39.03 2.40
4481 11101 3.564218 GGCAGGCGAGGGGATGAT 61.564 66.667 0.00 0.00 0.00 2.45
4610 11232 6.164876 TGATACAGTTTGGCATGGATTTTTG 58.835 36.000 0.00 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.877097 ACTTATCTCTTATCATCATTGGTGCTC 59.123 37.037 0.00 0.00 0.00 4.26
51 52 3.740115 AGAAACCGCACAGTTAATGACT 58.260 40.909 0.00 0.00 39.89 3.41
71 72 9.596677 CTACTTAGGATTCTAAATAACGTCGAG 57.403 37.037 0.00 0.00 35.30 4.04
93 94 9.561069 CCATTAAATACCTTGAACTATGCTACT 57.439 33.333 0.00 0.00 0.00 2.57
111 112 5.719085 TGTTGGCTGTATTGTCCCATTAAAT 59.281 36.000 0.00 0.00 0.00 1.40
114 115 4.308526 TGTTGGCTGTATTGTCCCATTA 57.691 40.909 0.00 0.00 0.00 1.90
129 130 2.427095 AGATTTAGGCGGAATTGTTGGC 59.573 45.455 0.00 0.00 0.00 4.52
130 131 4.718940 AAGATTTAGGCGGAATTGTTGG 57.281 40.909 0.00 0.00 0.00 3.77
131 132 6.616947 TGTTAAGATTTAGGCGGAATTGTTG 58.383 36.000 0.00 0.00 0.00 3.33
134 135 7.535139 TCTTTGTTAAGATTTAGGCGGAATTG 58.465 34.615 0.00 0.00 35.49 2.32
136 137 6.884836 ACTCTTTGTTAAGATTTAGGCGGAAT 59.115 34.615 0.00 0.00 39.58 3.01
137 138 6.235664 ACTCTTTGTTAAGATTTAGGCGGAA 58.764 36.000 0.00 0.00 39.58 4.30
138 139 5.801380 ACTCTTTGTTAAGATTTAGGCGGA 58.199 37.500 0.00 0.00 39.58 5.54
139 140 5.875359 AGACTCTTTGTTAAGATTTAGGCGG 59.125 40.000 0.00 0.00 39.58 6.13
156 167 7.392113 TCTTCTTTAAGATCGAGTGAGACTCTT 59.608 37.037 3.68 0.00 38.65 2.85
165 176 6.687081 ATCGACTCTTCTTTAAGATCGAGT 57.313 37.500 19.96 19.96 44.82 4.18
166 177 6.075099 GCAATCGACTCTTCTTTAAGATCGAG 60.075 42.308 18.72 17.09 44.82 4.04
201 214 7.372451 TGTAGGATAATTTTTGACGTGGAAG 57.628 36.000 0.00 0.00 0.00 3.46
204 217 8.433421 ACTATGTAGGATAATTTTTGACGTGG 57.567 34.615 0.00 0.00 0.00 4.94
225 238 5.736492 GCACGCCAACTTCATAGTCTACTAT 60.736 44.000 0.00 0.00 39.61 2.12
241 254 6.081049 GCAATATTATAAATACGCACGCCAA 58.919 36.000 0.00 0.00 0.00 4.52
244 257 5.025826 GGGCAATATTATAAATACGCACGC 58.974 41.667 0.00 0.00 0.00 5.34
263 276 3.699038 GCCACATTCTTATTGTAAGGGCA 59.301 43.478 0.00 0.00 35.10 5.36
278 291 1.478510 CGACTGAGACCTAGCCACATT 59.521 52.381 0.00 0.00 0.00 2.71
401 594 2.420372 TCTCAGTCGATGCTATATCCGC 59.580 50.000 0.00 0.00 0.00 5.54
418 611 5.769484 AAGTCTCACTTCGTTAAGTCTCA 57.231 39.130 0.00 0.00 44.28 3.27
434 627 8.758633 TTATTGTAACAGTCTTGCTAAGTCTC 57.241 34.615 0.00 0.00 0.00 3.36
486 689 1.401905 GCCTTTTATCTCCAAGTGGCG 59.598 52.381 0.00 0.00 34.44 5.69
554 757 0.393402 TGGCAGCAGCGATGATTTCT 60.393 50.000 4.02 0.00 43.41 2.52
557 760 2.478890 GCTGGCAGCAGCGATGATT 61.479 57.895 33.33 0.00 41.89 2.57
567 770 1.927174 CCGTTATATATCGCTGGCAGC 59.073 52.381 29.22 29.22 38.02 5.25
589 792 2.264480 CAGGACGGCCGTTCATCA 59.736 61.111 37.02 0.00 39.96 3.07
591 794 1.546589 TAACCAGGACGGCCGTTCAT 61.547 55.000 37.02 22.22 39.03 2.57
648 853 4.894784 TCAAAGTGTTAGATGGACCAGAC 58.105 43.478 0.00 0.00 0.00 3.51
684 889 2.343758 CTATCCACGGCCATCGGG 59.656 66.667 2.24 0.00 44.45 5.14
686 891 2.357517 GGCTATCCACGGCCATCG 60.358 66.667 2.24 0.00 46.84 3.84
700 905 1.679032 CGGCTTAGCACCTTTAAGGCT 60.679 52.381 11.45 5.95 45.99 4.58
838 1046 0.671251 GTGTATAGCAGCGCTCTCCT 59.329 55.000 7.13 7.00 40.44 3.69
840 1048 1.482278 GTGTGTATAGCAGCGCTCTC 58.518 55.000 7.13 1.64 40.44 3.20
841 1049 0.248661 CGTGTGTATAGCAGCGCTCT 60.249 55.000 7.13 10.92 40.44 4.09
842 1050 0.248498 TCGTGTGTATAGCAGCGCTC 60.248 55.000 7.13 2.24 40.44 5.03
843 1051 0.525668 GTCGTGTGTATAGCAGCGCT 60.526 55.000 2.64 2.64 43.41 5.92
844 1052 0.800683 TGTCGTGTGTATAGCAGCGC 60.801 55.000 0.00 0.00 0.00 5.92
845 1053 1.583856 CTTGTCGTGTGTATAGCAGCG 59.416 52.381 0.00 0.00 0.00 5.18
846 1054 1.927174 CCTTGTCGTGTGTATAGCAGC 59.073 52.381 0.00 0.00 0.00 5.25
847 1055 3.503827 TCCTTGTCGTGTGTATAGCAG 57.496 47.619 0.00 0.00 0.00 4.24
848 1056 3.430236 CCATCCTTGTCGTGTGTATAGCA 60.430 47.826 0.00 0.00 0.00 3.49
849 1057 3.123804 CCATCCTTGTCGTGTGTATAGC 58.876 50.000 0.00 0.00 0.00 2.97
850 1058 4.360563 GTCCATCCTTGTCGTGTGTATAG 58.639 47.826 0.00 0.00 0.00 1.31
851 1059 3.181494 CGTCCATCCTTGTCGTGTGTATA 60.181 47.826 0.00 0.00 0.00 1.47
852 1060 2.416836 CGTCCATCCTTGTCGTGTGTAT 60.417 50.000 0.00 0.00 0.00 2.29
853 1061 1.068125 CGTCCATCCTTGTCGTGTGTA 60.068 52.381 0.00 0.00 0.00 2.90
854 1062 0.319555 CGTCCATCCTTGTCGTGTGT 60.320 55.000 0.00 0.00 0.00 3.72
855 1063 0.038618 TCGTCCATCCTTGTCGTGTG 60.039 55.000 0.00 0.00 0.00 3.82
856 1064 0.895530 ATCGTCCATCCTTGTCGTGT 59.104 50.000 0.00 0.00 0.00 4.49
857 1065 2.010145 AATCGTCCATCCTTGTCGTG 57.990 50.000 0.00 0.00 0.00 4.35
858 1066 2.762535 AAATCGTCCATCCTTGTCGT 57.237 45.000 0.00 0.00 0.00 4.34
859 1067 3.306166 GTGTAAATCGTCCATCCTTGTCG 59.694 47.826 0.00 0.00 0.00 4.35
860 1068 4.092968 GTGTGTAAATCGTCCATCCTTGTC 59.907 45.833 0.00 0.00 0.00 3.18
861 1069 4.000988 GTGTGTAAATCGTCCATCCTTGT 58.999 43.478 0.00 0.00 0.00 3.16
862 1070 3.062099 CGTGTGTAAATCGTCCATCCTTG 59.938 47.826 0.00 0.00 0.00 3.61
863 1071 3.056393 TCGTGTGTAAATCGTCCATCCTT 60.056 43.478 0.00 0.00 0.00 3.36
864 1072 2.494471 TCGTGTGTAAATCGTCCATCCT 59.506 45.455 0.00 0.00 0.00 3.24
865 1073 2.883574 TCGTGTGTAAATCGTCCATCC 58.116 47.619 0.00 0.00 0.00 3.51
866 1074 3.302480 GCATCGTGTGTAAATCGTCCATC 60.302 47.826 0.00 0.00 0.00 3.51
867 1075 2.607635 GCATCGTGTGTAAATCGTCCAT 59.392 45.455 0.00 0.00 0.00 3.41
868 1076 1.996898 GCATCGTGTGTAAATCGTCCA 59.003 47.619 0.00 0.00 0.00 4.02
869 1077 2.268298 AGCATCGTGTGTAAATCGTCC 58.732 47.619 0.00 0.00 0.00 4.79
870 1078 3.242248 GGTAGCATCGTGTGTAAATCGTC 59.758 47.826 0.00 0.00 0.00 4.20
871 1079 3.184541 GGTAGCATCGTGTGTAAATCGT 58.815 45.455 0.00 0.00 0.00 3.73
872 1080 2.538449 GGGTAGCATCGTGTGTAAATCG 59.462 50.000 0.00 0.00 0.00 3.34
873 1081 3.527533 TGGGTAGCATCGTGTGTAAATC 58.472 45.455 0.00 0.00 0.00 2.17
874 1082 3.620427 TGGGTAGCATCGTGTGTAAAT 57.380 42.857 0.00 0.00 0.00 1.40
875 1083 3.055747 TGATGGGTAGCATCGTGTGTAAA 60.056 43.478 0.00 0.00 32.04 2.01
876 1084 2.498078 TGATGGGTAGCATCGTGTGTAA 59.502 45.455 0.00 0.00 32.04 2.41
877 1085 2.104170 TGATGGGTAGCATCGTGTGTA 58.896 47.619 0.00 0.00 32.04 2.90
878 1086 0.901827 TGATGGGTAGCATCGTGTGT 59.098 50.000 0.00 0.00 32.04 3.72
879 1087 1.935873 CTTGATGGGTAGCATCGTGTG 59.064 52.381 0.00 0.00 32.04 3.82
880 1088 1.831106 TCTTGATGGGTAGCATCGTGT 59.169 47.619 0.00 0.00 32.04 4.49
881 1089 2.205074 GTCTTGATGGGTAGCATCGTG 58.795 52.381 0.00 0.00 32.04 4.35
882 1090 1.202417 CGTCTTGATGGGTAGCATCGT 60.202 52.381 0.00 0.00 32.04 3.73
883 1091 1.202417 ACGTCTTGATGGGTAGCATCG 60.202 52.381 0.00 0.00 32.04 3.84
884 1092 2.474816 GACGTCTTGATGGGTAGCATC 58.525 52.381 8.70 0.00 0.00 3.91
885 1093 1.139058 GGACGTCTTGATGGGTAGCAT 59.861 52.381 16.46 0.00 0.00 3.79
886 1094 0.535335 GGACGTCTTGATGGGTAGCA 59.465 55.000 16.46 0.00 0.00 3.49
887 1095 0.535335 TGGACGTCTTGATGGGTAGC 59.465 55.000 16.46 0.00 0.00 3.58
888 1096 3.543680 AATGGACGTCTTGATGGGTAG 57.456 47.619 16.46 0.00 0.00 3.18
889 1097 3.992943 AAATGGACGTCTTGATGGGTA 57.007 42.857 16.46 0.00 0.00 3.69
890 1098 2.879103 AAATGGACGTCTTGATGGGT 57.121 45.000 16.46 0.00 0.00 4.51
891 1099 3.374058 GTGTAAATGGACGTCTTGATGGG 59.626 47.826 16.46 0.00 0.00 4.00
892 1100 4.000325 TGTGTAAATGGACGTCTTGATGG 59.000 43.478 16.46 0.00 0.00 3.51
893 1101 5.408299 TCTTGTGTAAATGGACGTCTTGATG 59.592 40.000 16.46 0.00 0.00 3.07
894 1102 5.547465 TCTTGTGTAAATGGACGTCTTGAT 58.453 37.500 16.46 2.50 0.00 2.57
895 1103 4.951254 TCTTGTGTAAATGGACGTCTTGA 58.049 39.130 16.46 0.00 0.00 3.02
896 1104 5.179368 ACATCTTGTGTAAATGGACGTCTTG 59.821 40.000 16.46 0.00 39.91 3.02
897 1105 5.305585 ACATCTTGTGTAAATGGACGTCTT 58.694 37.500 16.46 4.56 39.91 3.01
898 1106 4.894784 ACATCTTGTGTAAATGGACGTCT 58.105 39.130 16.46 0.00 39.91 4.18
899 1107 5.867716 AGTACATCTTGTGTAAATGGACGTC 59.132 40.000 7.13 7.13 44.52 4.34
900 1108 5.637810 CAGTACATCTTGTGTAAATGGACGT 59.362 40.000 0.00 0.00 44.52 4.34
901 1109 5.637810 ACAGTACATCTTGTGTAAATGGACG 59.362 40.000 0.00 0.00 44.52 4.79
902 1110 8.718102 ATACAGTACATCTTGTGTAAATGGAC 57.282 34.615 0.00 0.00 44.52 4.02
903 1111 8.536175 TGATACAGTACATCTTGTGTAAATGGA 58.464 33.333 0.00 0.00 44.52 3.41
904 1112 8.716646 TGATACAGTACATCTTGTGTAAATGG 57.283 34.615 0.00 0.00 44.52 3.16
906 1114 8.883731 GCTTGATACAGTACATCTTGTGTAAAT 58.116 33.333 0.00 0.00 44.52 1.40
907 1115 7.333423 GGCTTGATACAGTACATCTTGTGTAAA 59.667 37.037 0.00 0.00 44.52 2.01
908 1116 6.816640 GGCTTGATACAGTACATCTTGTGTAA 59.183 38.462 0.00 0.00 44.52 2.41
909 1117 6.338146 GGCTTGATACAGTACATCTTGTGTA 58.662 40.000 0.00 0.00 42.29 2.90
910 1118 5.178797 GGCTTGATACAGTACATCTTGTGT 58.821 41.667 0.00 0.00 44.95 3.72
911 1119 4.268644 CGGCTTGATACAGTACATCTTGTG 59.731 45.833 0.00 0.00 0.00 3.33
912 1120 4.081642 ACGGCTTGATACAGTACATCTTGT 60.082 41.667 0.00 0.00 0.00 3.16
913 1121 4.433615 ACGGCTTGATACAGTACATCTTG 58.566 43.478 0.00 0.00 0.00 3.02
914 1122 4.737855 ACGGCTTGATACAGTACATCTT 57.262 40.909 0.00 0.00 0.00 2.40
915 1123 4.159693 TGAACGGCTTGATACAGTACATCT 59.840 41.667 0.00 0.00 0.00 2.90
916 1124 4.430007 TGAACGGCTTGATACAGTACATC 58.570 43.478 0.00 0.00 0.00 3.06
917 1125 4.465632 TGAACGGCTTGATACAGTACAT 57.534 40.909 0.00 0.00 0.00 2.29
918 1126 3.945981 TGAACGGCTTGATACAGTACA 57.054 42.857 0.00 0.00 0.00 2.90
919 1127 4.868171 TGATTGAACGGCTTGATACAGTAC 59.132 41.667 0.00 0.00 0.00 2.73
920 1128 5.079689 TGATTGAACGGCTTGATACAGTA 57.920 39.130 0.00 0.00 0.00 2.74
921 1129 3.935203 CTGATTGAACGGCTTGATACAGT 59.065 43.478 0.00 0.00 0.00 3.55
922 1130 3.242543 GCTGATTGAACGGCTTGATACAG 60.243 47.826 0.00 0.00 38.89 2.74
923 1131 2.677836 GCTGATTGAACGGCTTGATACA 59.322 45.455 0.00 0.00 38.89 2.29
924 1132 2.032178 GGCTGATTGAACGGCTTGATAC 59.968 50.000 0.00 0.00 41.36 2.24
925 1133 2.288666 GGCTGATTGAACGGCTTGATA 58.711 47.619 0.00 0.00 41.36 2.15
926 1134 1.098050 GGCTGATTGAACGGCTTGAT 58.902 50.000 0.00 0.00 41.36 2.57
927 1135 0.250684 TGGCTGATTGAACGGCTTGA 60.251 50.000 0.00 0.00 41.36 3.02
928 1136 0.813184 ATGGCTGATTGAACGGCTTG 59.187 50.000 0.00 0.00 41.36 4.01
929 1137 1.098050 GATGGCTGATTGAACGGCTT 58.902 50.000 0.00 0.00 41.36 4.35
930 1138 1.091771 CGATGGCTGATTGAACGGCT 61.092 55.000 0.00 0.00 41.36 5.52
931 1139 1.353103 CGATGGCTGATTGAACGGC 59.647 57.895 0.00 0.00 40.94 5.68
932 1140 0.374758 CACGATGGCTGATTGAACGG 59.625 55.000 0.00 0.00 0.00 4.44
933 1141 0.247814 GCACGATGGCTGATTGAACG 60.248 55.000 0.00 0.00 0.00 3.95
934 1142 0.804364 TGCACGATGGCTGATTGAAC 59.196 50.000 0.00 0.00 34.04 3.18
935 1143 1.402613 CATGCACGATGGCTGATTGAA 59.597 47.619 0.00 0.00 34.04 2.69
936 1144 1.018910 CATGCACGATGGCTGATTGA 58.981 50.000 0.00 0.00 34.04 2.57
937 1145 0.030235 CCATGCACGATGGCTGATTG 59.970 55.000 0.00 0.00 45.58 2.67
938 1146 2.411535 CCATGCACGATGGCTGATT 58.588 52.632 0.00 0.00 45.58 2.57
939 1147 4.152644 CCATGCACGATGGCTGAT 57.847 55.556 0.00 0.00 45.58 2.90
945 1153 2.404789 GCCGAACCATGCACGATG 59.595 61.111 0.00 0.00 0.00 3.84
946 1154 2.824041 GGCCGAACCATGCACGAT 60.824 61.111 0.00 0.00 38.86 3.73
965 1173 4.980805 TGGGCGAACGACACTGCC 62.981 66.667 1.79 0.00 46.82 4.85
966 1174 2.758770 TACTGGGCGAACGACACTGC 62.759 60.000 1.79 0.00 0.00 4.40
967 1175 0.732880 CTACTGGGCGAACGACACTG 60.733 60.000 1.79 0.18 0.00 3.66
968 1176 1.177256 ACTACTGGGCGAACGACACT 61.177 55.000 1.79 0.00 0.00 3.55
969 1177 0.319297 AACTACTGGGCGAACGACAC 60.319 55.000 1.79 0.00 0.00 3.67
970 1178 0.390124 AAACTACTGGGCGAACGACA 59.610 50.000 1.79 0.00 0.00 4.35
971 1179 1.066136 GAAACTACTGGGCGAACGAC 58.934 55.000 0.00 0.00 0.00 4.34
972 1180 0.387622 CGAAACTACTGGGCGAACGA 60.388 55.000 0.00 0.00 0.00 3.85
973 1181 1.349259 CCGAAACTACTGGGCGAACG 61.349 60.000 0.00 0.00 0.00 3.95
974 1182 0.037975 TCCGAAACTACTGGGCGAAC 60.038 55.000 0.00 0.00 0.00 3.95
975 1183 0.245539 CTCCGAAACTACTGGGCGAA 59.754 55.000 0.00 0.00 0.00 4.70
976 1184 0.609957 TCTCCGAAACTACTGGGCGA 60.610 55.000 0.00 0.00 0.00 5.54
977 1185 0.179134 CTCTCCGAAACTACTGGGCG 60.179 60.000 0.00 0.00 0.00 6.13
978 1186 1.135333 CTCTCTCCGAAACTACTGGGC 59.865 57.143 0.00 0.00 0.00 5.36
979 1187 1.751924 CCTCTCTCCGAAACTACTGGG 59.248 57.143 0.00 0.00 0.00 4.45
980 1188 2.724454 TCCTCTCTCCGAAACTACTGG 58.276 52.381 0.00 0.00 0.00 4.00
981 1189 3.067461 CCATCCTCTCTCCGAAACTACTG 59.933 52.174 0.00 0.00 0.00 2.74
982 1190 3.292460 CCATCCTCTCTCCGAAACTACT 58.708 50.000 0.00 0.00 0.00 2.57
983 1191 2.362717 CCCATCCTCTCTCCGAAACTAC 59.637 54.545 0.00 0.00 0.00 2.73
984 1192 2.667470 CCCATCCTCTCTCCGAAACTA 58.333 52.381 0.00 0.00 0.00 2.24
985 1193 1.490574 CCCATCCTCTCTCCGAAACT 58.509 55.000 0.00 0.00 0.00 2.66
986 1194 0.466124 CCCCATCCTCTCTCCGAAAC 59.534 60.000 0.00 0.00 0.00 2.78
987 1195 0.338467 TCCCCATCCTCTCTCCGAAA 59.662 55.000 0.00 0.00 0.00 3.46
988 1196 0.105964 CTCCCCATCCTCTCTCCGAA 60.106 60.000 0.00 0.00 0.00 4.30
989 1197 1.539165 CTCCCCATCCTCTCTCCGA 59.461 63.158 0.00 0.00 0.00 4.55
990 1198 1.532794 CCTCCCCATCCTCTCTCCG 60.533 68.421 0.00 0.00 0.00 4.63
1049 1257 2.847435 AAAATCCGCGTCCCTCGTCC 62.847 60.000 4.92 0.00 42.13 4.79
1050 1258 1.017701 AAAAATCCGCGTCCCTCGTC 61.018 55.000 4.92 0.00 42.13 4.20
1051 1259 1.004200 AAAAATCCGCGTCCCTCGT 60.004 52.632 4.92 0.00 42.13 4.18
1052 1260 1.702491 GGAAAAATCCGCGTCCCTCG 61.702 60.000 4.92 0.00 43.12 4.63
1053 1261 0.392595 AGGAAAAATCCGCGTCCCTC 60.393 55.000 4.92 0.00 34.28 4.30
1054 1262 0.906775 TAGGAAAAATCCGCGTCCCT 59.093 50.000 4.92 3.03 34.28 4.20
1100 1308 1.065410 TCCTGGTGGATGTGTGGGTT 61.065 55.000 0.00 0.00 37.46 4.11
1861 2098 1.128200 AATCTAGCATACCCGGTGCA 58.872 50.000 16.90 3.52 44.87 4.57
2777 3601 1.079750 GTCCTCCTTGCTCGTCCAC 60.080 63.158 0.00 0.00 0.00 4.02
2885 3726 2.236766 TGGCTAGCTAGGGATTACGTC 58.763 52.381 22.10 2.00 0.00 4.34
2886 3727 2.376695 TGGCTAGCTAGGGATTACGT 57.623 50.000 22.10 0.00 0.00 3.57
2901 3742 2.700897 GAGTGGTCCTGTGTATATGGCT 59.299 50.000 0.00 0.00 0.00 4.75
2903 3744 3.960755 TCAGAGTGGTCCTGTGTATATGG 59.039 47.826 0.00 0.00 35.94 2.74
2904 3745 5.798125 ATCAGAGTGGTCCTGTGTATATG 57.202 43.478 0.00 0.00 35.94 1.78
2906 3747 5.519808 AGAATCAGAGTGGTCCTGTGTATA 58.480 41.667 0.00 0.00 35.94 1.47
2908 3749 3.779444 AGAATCAGAGTGGTCCTGTGTA 58.221 45.455 0.00 0.00 35.94 2.90
2911 3752 4.614475 TGATAGAATCAGAGTGGTCCTGT 58.386 43.478 0.00 0.00 33.59 4.00
2912 3753 5.604758 TTGATAGAATCAGAGTGGTCCTG 57.395 43.478 0.00 0.00 40.94 3.86
2913 3754 5.071519 CCATTGATAGAATCAGAGTGGTCCT 59.928 44.000 0.00 0.00 40.94 3.85
2914 3755 5.303971 CCATTGATAGAATCAGAGTGGTCC 58.696 45.833 8.63 0.00 40.94 4.46
2915 3756 4.754114 GCCATTGATAGAATCAGAGTGGTC 59.246 45.833 14.26 7.57 40.94 4.02
2925 3767 2.369860 TCCAGCTCGCCATTGATAGAAT 59.630 45.455 0.00 0.00 0.00 2.40
2938 3781 4.544689 CGCTCTCCGTCCAGCTCG 62.545 72.222 0.00 0.00 33.09 5.03
2947 3794 2.182030 GTCAACTCCCGCTCTCCG 59.818 66.667 0.00 0.00 0.00 4.63
2949 3796 2.507324 GCGTCAACTCCCGCTCTC 60.507 66.667 0.00 0.00 46.08 3.20
2955 3802 0.517316 GTTCACATGCGTCAACTCCC 59.483 55.000 0.00 0.00 0.00 4.30
2959 3806 3.058983 TCATTCAGTTCACATGCGTCAAC 60.059 43.478 0.00 0.00 0.00 3.18
2960 3807 3.137533 TCATTCAGTTCACATGCGTCAA 58.862 40.909 0.00 0.00 0.00 3.18
2971 3818 4.352039 CTGCATGCAGATTCATTCAGTTC 58.648 43.478 38.90 0.00 46.30 3.01
3491 6355 3.785499 CGACGACGTCTCCGAGCA 61.785 66.667 24.36 0.00 37.88 4.26
3651 6518 2.288825 CCCACGTACATGTGACTGAACT 60.289 50.000 9.11 0.00 42.55 3.01
3696 9527 7.990886 TCAAGTACACATACAGTTTCCTTTTCT 59.009 33.333 0.00 0.00 33.30 2.52
3731 9562 4.503734 GGCGTAAGTGCATTTGTACGTATA 59.496 41.667 15.72 0.00 41.00 1.47
3778 9609 1.941999 AACGTACGGGAGCTAGCCAC 61.942 60.000 21.06 6.01 0.00 5.01
3843 9714 0.942962 AGCGACGCTAGCTTACGTAT 59.057 50.000 23.15 6.21 43.24 3.06
3944 9816 4.634184 AATCTCACTAGCGTATGTCGTT 57.366 40.909 0.00 0.00 42.13 3.85
4071 9978 4.201753 ACGAATGCACGATTCATCTTCTTG 60.202 41.667 3.48 0.00 40.67 3.02
4089 9996 1.807814 AATAGAGGGGGAGCACGAAT 58.192 50.000 0.00 0.00 0.00 3.34
4090 9997 2.317040 CTAATAGAGGGGGAGCACGAA 58.683 52.381 0.00 0.00 0.00 3.85
4091 9998 1.480683 CCTAATAGAGGGGGAGCACGA 60.481 57.143 0.00 0.00 42.39 4.35
4093 10000 0.687920 GCCTAATAGAGGGGGAGCAC 59.312 60.000 0.00 0.00 46.81 4.40
4095 10002 0.178888 AGGCCTAATAGAGGGGGAGC 60.179 60.000 1.29 0.00 46.81 4.70
4098 10005 1.821088 ACAAGGCCTAATAGAGGGGG 58.179 55.000 5.16 0.00 46.81 5.40
4099 10006 3.555966 CAAACAAGGCCTAATAGAGGGG 58.444 50.000 5.16 0.00 46.81 4.79
4100 10007 3.053619 ACCAAACAAGGCCTAATAGAGGG 60.054 47.826 5.16 4.88 46.81 4.30
4102 10009 6.093633 GTGTAACCAAACAAGGCCTAATAGAG 59.906 42.308 5.16 0.00 0.00 2.43
4129 10036 5.213868 TCCTCTTCTATCCCTTGAGAAGT 57.786 43.478 10.54 0.00 45.89 3.01
4170 10077 0.031817 AATTGGCAGGGATTGAGGGG 60.032 55.000 0.00 0.00 0.00 4.79
4171 10078 1.406903 GAATTGGCAGGGATTGAGGG 58.593 55.000 0.00 0.00 0.00 4.30
4172 10079 1.063417 AGGAATTGGCAGGGATTGAGG 60.063 52.381 0.00 0.00 0.00 3.86
4209 10116 1.307517 TCCGGGGGCCTATTTGAGT 60.308 57.895 0.84 0.00 0.00 3.41
4227 10134 4.957954 TGTAGGAGTATATTGGACCAACGT 59.042 41.667 9.67 3.68 0.00 3.99
4234 10141 5.368230 TGCATTGGTGTAGGAGTATATTGGA 59.632 40.000 0.00 0.00 0.00 3.53
4239 10146 4.719773 AGGTTGCATTGGTGTAGGAGTATA 59.280 41.667 0.00 0.00 0.00 1.47
4241 10148 2.910319 AGGTTGCATTGGTGTAGGAGTA 59.090 45.455 0.00 0.00 0.00 2.59
4253 10160 5.163519 GCACTTACATTATGGAGGTTGCATT 60.164 40.000 8.40 0.00 29.08 3.56
4325 10234 4.856607 CGCTCGACGCCTCCTTCC 62.857 72.222 0.00 0.00 34.21 3.46
4338 10247 1.741770 AATGCCAACCGAGTCGCTC 60.742 57.895 7.12 0.00 0.00 5.03
4339 10248 2.034879 CAATGCCAACCGAGTCGCT 61.035 57.895 7.12 0.00 0.00 4.93
4342 10251 0.169009 GCTTCAATGCCAACCGAGTC 59.831 55.000 0.00 0.00 0.00 3.36
4356 10265 1.885887 CCGGGATTTTGACAAGCTTCA 59.114 47.619 0.00 0.00 0.00 3.02
4365 10274 3.162147 TGTTTGATCCCGGGATTTTGA 57.838 42.857 36.23 19.59 34.60 2.69
4375 10284 7.148656 CGTTTTGGTTTAATCATGTTTGATCCC 60.149 37.037 0.00 0.00 41.83 3.85
4467 11087 1.700042 GGTTCATCATCCCCTCGCCT 61.700 60.000 0.00 0.00 0.00 5.52
4513 11135 0.423544 ATTCAGGAAGGACCCTCCCT 59.576 55.000 5.43 0.00 37.19 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.