Multiple sequence alignment - TraesCS7B01G066400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G066400 chr7B 100.000 2837 0 0 1 2837 72257491 72254655 0.000000e+00 5240.0
1 TraesCS7B01G066400 chr7B 82.388 1675 156 77 212 1847 72242537 72240963 0.000000e+00 1330.0
2 TraesCS7B01G066400 chr7B 91.196 443 29 8 2233 2673 497670590 497671024 6.770000e-166 593.0
3 TraesCS7B01G066400 chr7B 91.216 444 28 6 2232 2673 497675437 497675871 6.770000e-166 593.0
4 TraesCS7B01G066400 chr7B 84.810 158 13 6 2 159 72242756 72242610 6.330000e-32 148.0
5 TraesCS7B01G066400 chr7D 86.660 982 67 36 884 1847 112433788 112432853 0.000000e+00 1029.0
6 TraesCS7B01G066400 chr7D 82.617 1047 98 45 125 1140 112434524 112433531 0.000000e+00 848.0
7 TraesCS7B01G066400 chr7D 91.723 447 28 4 2230 2673 289510480 289510920 1.870000e-171 612.0
8 TraesCS7B01G066400 chr7D 91.453 117 9 1 2 118 112434678 112434563 2.930000e-35 159.0
9 TraesCS7B01G066400 chr7A 91.364 440 23 7 883 1313 117823580 117823147 3.150000e-164 588.0
10 TraesCS7B01G066400 chr7A 90.423 355 29 2 1353 1707 117823077 117822728 1.990000e-126 462.0
11 TraesCS7B01G066400 chr7A 84.726 347 19 17 503 825 117823988 117823652 1.640000e-82 316.0
12 TraesCS7B01G066400 chr7A 95.413 109 3 2 1724 1831 117822649 117822542 3.760000e-39 172.0
13 TraesCS7B01G066400 chr7A 100.000 33 0 0 837 869 117823598 117823566 8.490000e-06 62.1
14 TraesCS7B01G066400 chr7A 100.000 31 0 0 145 175 501928107 501928077 1.100000e-04 58.4
15 TraesCS7B01G066400 chr5D 83.598 567 61 20 2277 2831 169265507 169264961 1.170000e-138 503.0
16 TraesCS7B01G066400 chr5D 85.327 443 46 12 2255 2690 169372925 169372495 9.330000e-120 440.0
17 TraesCS7B01G066400 chr3A 87.383 428 47 6 2277 2700 37559000 37558576 4.250000e-133 484.0
18 TraesCS7B01G066400 chr3A 88.489 139 14 2 2697 2835 305362462 305362598 1.750000e-37 167.0
19 TraesCS7B01G066400 chr3D 81.310 519 67 28 2233 2739 376343283 376342783 7.370000e-106 394.0
20 TraesCS7B01G066400 chr2D 81.445 512 65 28 2234 2733 389876107 389876600 2.650000e-105 392.0
21 TraesCS7B01G066400 chr2D 81.128 514 66 29 2232 2733 231272114 231271620 1.590000e-102 383.0
22 TraesCS7B01G066400 chr1B 90.598 117 10 1 2720 2835 283960704 283960820 1.360000e-33 154.0
23 TraesCS7B01G066400 chr1B 90.351 114 11 0 2718 2831 284023478 284023591 1.760000e-32 150.0
24 TraesCS7B01G066400 chr5A 91.525 59 5 0 2766 2824 232580002 232580060 6.510000e-12 82.4
25 TraesCS7B01G066400 chr6B 100.000 32 0 0 2152 2183 559022004 559021973 3.050000e-05 60.2
26 TraesCS7B01G066400 chr1D 100.000 28 0 0 2157 2184 338765776 338765803 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G066400 chr7B 72254655 72257491 2836 True 5240.000000 5240 100.0000 1 2837 1 chr7B.!!$R1 2836
1 TraesCS7B01G066400 chr7B 72240963 72242756 1793 True 739.000000 1330 83.5990 2 1847 2 chr7B.!!$R2 1845
2 TraesCS7B01G066400 chr7D 112432853 112434678 1825 True 678.666667 1029 86.9100 2 1847 3 chr7D.!!$R1 1845
3 TraesCS7B01G066400 chr7A 117822542 117823988 1446 True 320.020000 588 92.3852 503 1831 5 chr7A.!!$R2 1328
4 TraesCS7B01G066400 chr5D 169264961 169265507 546 True 503.000000 503 83.5980 2277 2831 1 chr5D.!!$R1 554
5 TraesCS7B01G066400 chr3D 376342783 376343283 500 True 394.000000 394 81.3100 2233 2739 1 chr3D.!!$R1 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
205 257 0.03582 ACCCATTGTACGCGGACATT 60.036 50.0 27.45 19.68 0.0 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2072 2399 0.034337 TAAACAGGACTGTCCGTGGC 59.966 55.0 20.49 0.0 44.13 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 85 6.351711 TGTGTAGCTGAATTGCTATCAATCT 58.648 36.000 0.00 0.00 45.70 2.40
85 86 6.481313 TGTGTAGCTGAATTGCTATCAATCTC 59.519 38.462 0.00 0.00 45.70 2.75
126 156 5.996513 TGCATGGCAGACATTTTGTAAATTT 59.003 32.000 0.00 0.00 37.84 1.82
164 197 2.258286 GGCGGACATTTGGTGCAC 59.742 61.111 8.80 8.80 37.78 4.57
175 208 1.780107 TTGGTGCACCGGGTTGGATA 61.780 55.000 30.07 7.05 42.00 2.59
176 209 1.001887 GGTGCACCGGGTTGGATAA 60.002 57.895 22.49 0.00 42.00 1.75
190 223 0.327770 GGATAACCACCCCCTACCCA 60.328 60.000 0.00 0.00 35.97 4.51
195 247 0.121608 ACCACCCCCTACCCATTGTA 59.878 55.000 0.00 0.00 0.00 2.41
198 250 1.147600 CCCCCTACCCATTGTACGC 59.852 63.158 0.00 0.00 0.00 4.42
199 251 1.227438 CCCCTACCCATTGTACGCG 60.227 63.158 3.53 3.53 0.00 6.01
200 252 1.227438 CCCTACCCATTGTACGCGG 60.227 63.158 12.47 0.00 0.00 6.46
201 253 1.678598 CCCTACCCATTGTACGCGGA 61.679 60.000 12.47 0.00 0.00 5.54
202 254 0.529119 CCTACCCATTGTACGCGGAC 60.529 60.000 16.44 16.44 0.00 4.79
203 255 0.173935 CTACCCATTGTACGCGGACA 59.826 55.000 22.88 22.88 0.00 4.02
204 256 0.825410 TACCCATTGTACGCGGACAT 59.175 50.000 27.45 12.81 0.00 3.06
205 257 0.035820 ACCCATTGTACGCGGACATT 60.036 50.000 27.45 19.68 0.00 2.71
206 258 1.091537 CCCATTGTACGCGGACATTT 58.908 50.000 27.45 13.58 0.00 2.32
207 259 1.202132 CCCATTGTACGCGGACATTTG 60.202 52.381 27.45 24.00 0.00 2.32
208 260 1.735018 CCATTGTACGCGGACATTTGA 59.265 47.619 27.45 11.07 0.00 2.69
209 261 2.475519 CCATTGTACGCGGACATTTGAC 60.476 50.000 27.45 0.00 0.00 3.18
210 262 0.785378 TTGTACGCGGACATTTGACG 59.215 50.000 27.45 0.00 0.00 4.35
211 263 0.318869 TGTACGCGGACATTTGACGT 60.319 50.000 22.88 0.00 40.53 4.34
212 264 0.092351 GTACGCGGACATTTGACGTG 59.908 55.000 18.68 9.91 43.09 4.49
213 265 1.593209 ACGCGGACATTTGACGTGT 60.593 52.632 12.47 10.87 45.17 4.49
214 266 1.129809 CGCGGACATTTGACGTGTC 59.870 57.895 0.00 0.00 44.01 3.67
221 273 3.617669 GACATTTGACGTGTCCAGTTTG 58.382 45.455 0.00 0.00 39.99 2.93
228 280 1.229428 CGTGTCCAGTTTGATGCACT 58.771 50.000 0.00 0.00 0.00 4.40
229 281 1.069703 CGTGTCCAGTTTGATGCACTG 60.070 52.381 0.00 0.00 41.29 3.66
235 287 0.311790 AGTTTGATGCACTGCGTTGG 59.688 50.000 0.00 0.00 0.00 3.77
239 291 0.950555 TGATGCACTGCGTTGGAGAC 60.951 55.000 0.00 0.00 0.00 3.36
240 292 0.671781 GATGCACTGCGTTGGAGACT 60.672 55.000 0.00 0.00 0.00 3.24
253 305 3.269592 TGGAGACTCCCTAACTTTCCA 57.730 47.619 19.11 0.00 35.03 3.53
306 358 5.475719 CACAATTTGCTTCATCCAATCTGT 58.524 37.500 0.00 0.00 0.00 3.41
307 359 6.623486 CACAATTTGCTTCATCCAATCTGTA 58.377 36.000 0.00 0.00 0.00 2.74
308 360 7.262772 CACAATTTGCTTCATCCAATCTGTAT 58.737 34.615 0.00 0.00 0.00 2.29
309 361 8.407832 CACAATTTGCTTCATCCAATCTGTATA 58.592 33.333 0.00 0.00 0.00 1.47
363 415 9.823647 TTTCTATGTTGAAACCTTATTTTGCAA 57.176 25.926 0.00 0.00 31.81 4.08
365 417 9.638239 TCTATGTTGAAACCTTATTTTGCAATC 57.362 29.630 0.00 0.00 0.00 2.67
416 475 4.457834 AAGTCAAGTCCCTATTCTGTCG 57.542 45.455 0.00 0.00 0.00 4.35
420 479 3.695060 TCAAGTCCCTATTCTGTCGAGAC 59.305 47.826 0.00 0.00 0.00 3.36
464 523 5.343860 AAAGCATTTTGTCGTTTAATACGCC 59.656 36.000 5.62 0.00 42.73 5.68
465 524 7.006812 AAAGCATTTTGTCGTTTAATACGCCA 61.007 34.615 5.62 0.00 42.73 5.69
682 764 2.027385 TGAGATGCGTAGTGCTGATCT 58.973 47.619 0.00 0.00 46.63 2.75
690 772 3.982058 GCGTAGTGCTGATCTACCAATAC 59.018 47.826 0.00 1.90 41.73 1.89
692 774 3.099267 AGTGCTGATCTACCAATACGC 57.901 47.619 0.00 0.00 0.00 4.42
725 817 4.219999 GCTGAGGAGAGGCGAGCC 62.220 72.222 5.89 5.89 0.00 4.70
869 1025 4.088634 TCATGCCAAAGCTACTCCATTTT 58.911 39.130 0.00 0.00 40.80 1.82
870 1026 4.527816 TCATGCCAAAGCTACTCCATTTTT 59.472 37.500 0.00 0.00 40.80 1.94
900 1057 6.479001 TGCGAGAAAAGCTACTCCATTTATAC 59.521 38.462 9.02 0.00 35.28 1.47
965 1130 3.575256 TGCAGTTGGAGCAAATCTGAATT 59.425 39.130 0.00 0.00 39.39 2.17
996 1164 0.175989 GACTCCCTCCATCGACCAAC 59.824 60.000 0.00 0.00 0.00 3.77
1023 1191 1.000145 GTTTCGGAGTCGATGCTTCC 59.000 55.000 0.00 0.00 45.51 3.46
1074 1242 3.105157 CCGCGCACATTGTTTGGC 61.105 61.111 8.75 0.00 0.00 4.52
1096 1278 8.696043 TGGCTATAAGACGGTATAAGAGTTAA 57.304 34.615 0.00 0.00 0.00 2.01
1097 1279 8.790718 TGGCTATAAGACGGTATAAGAGTTAAG 58.209 37.037 0.00 0.00 0.00 1.85
1179 1368 4.626081 ACCCTGAGCGCGCAAGTT 62.626 61.111 35.10 13.12 41.68 2.66
1192 1381 2.660552 AAGTTGACGGCCACGACG 60.661 61.111 2.24 0.00 44.60 5.12
1316 1510 6.919188 CGTACTCCTACGTGAAATTAACATG 58.081 40.000 0.00 0.00 40.83 3.21
1318 1512 7.274033 CGTACTCCTACGTGAAATTAACATGAA 59.726 37.037 0.00 0.00 40.83 2.57
1319 1513 7.972832 ACTCCTACGTGAAATTAACATGAAA 57.027 32.000 0.00 0.00 0.00 2.69
1321 1515 9.661563 ACTCCTACGTGAAATTAACATGAAATA 57.338 29.630 0.00 0.00 0.00 1.40
1322 1516 9.916397 CTCCTACGTGAAATTAACATGAAATAC 57.084 33.333 0.00 0.00 0.00 1.89
1329 1561 9.485591 GTGAAATTAACATGAAATACTACGTGG 57.514 33.333 0.00 0.00 0.00 4.94
1338 1570 3.513680 AATACTACGTGGTCGAATGCA 57.486 42.857 8.22 0.00 40.62 3.96
1342 1574 1.390123 CTACGTGGTCGAATGCACTTG 59.610 52.381 0.00 0.00 40.62 3.16
1344 1576 1.568612 CGTGGTCGAATGCACTTGCT 61.569 55.000 2.33 0.00 39.68 3.91
1345 1577 0.593128 GTGGTCGAATGCACTTGCTT 59.407 50.000 2.33 0.00 42.66 3.91
1346 1578 1.804151 GTGGTCGAATGCACTTGCTTA 59.196 47.619 2.33 0.00 42.66 3.09
1347 1579 2.420022 GTGGTCGAATGCACTTGCTTAT 59.580 45.455 2.33 0.00 42.66 1.73
1348 1580 3.621268 GTGGTCGAATGCACTTGCTTATA 59.379 43.478 2.33 0.00 42.66 0.98
1349 1581 4.273480 GTGGTCGAATGCACTTGCTTATAT 59.727 41.667 2.33 0.00 42.66 0.86
1350 1582 5.465390 GTGGTCGAATGCACTTGCTTATATA 59.535 40.000 2.33 0.00 42.66 0.86
1351 1583 6.147821 GTGGTCGAATGCACTTGCTTATATAT 59.852 38.462 2.33 0.00 42.66 0.86
1406 1669 4.619227 CGTGTGGTTCCCCTGCGT 62.619 66.667 0.00 0.00 0.00 5.24
1600 1863 4.729918 CCCACCTGCTCTGCCACC 62.730 72.222 0.00 0.00 0.00 4.61
1716 1980 9.529325 CTAACTTACATTAGTAGCATTGCAGTA 57.471 33.333 11.91 1.92 0.00 2.74
1719 1983 9.396022 ACTTACATTAGTAGCATTGCAGTAAAT 57.604 29.630 11.91 2.80 0.00 1.40
1720 1984 9.869844 CTTACATTAGTAGCATTGCAGTAAATC 57.130 33.333 11.91 0.00 0.00 2.17
1721 1985 9.613428 TTACATTAGTAGCATTGCAGTAAATCT 57.387 29.630 11.91 1.31 0.00 2.40
1831 2158 2.607750 AGGTGCCGATGACCAGGT 60.608 61.111 0.00 0.00 35.76 4.00
1837 2164 1.768275 TGCCGATGACCAGGTTATGAT 59.232 47.619 0.45 0.00 0.00 2.45
1844 2171 0.750850 ACCAGGTTATGATCGACCGG 59.249 55.000 0.00 0.00 40.89 5.28
1847 2174 1.038280 AGGTTATGATCGACCGGTCC 58.962 55.000 28.52 15.31 40.89 4.46
1848 2175 0.748450 GGTTATGATCGACCGGTCCA 59.252 55.000 28.52 20.53 0.00 4.02
1849 2176 1.343465 GGTTATGATCGACCGGTCCAT 59.657 52.381 28.52 25.26 0.00 3.41
1850 2177 2.609737 GGTTATGATCGACCGGTCCATC 60.610 54.545 29.06 29.06 0.00 3.51
1851 2178 1.254026 TATGATCGACCGGTCCATCC 58.746 55.000 31.36 18.07 0.00 3.51
1852 2179 0.759060 ATGATCGACCGGTCCATCCA 60.759 55.000 31.36 22.02 35.57 3.41
1853 2180 0.759060 TGATCGACCGGTCCATCCAT 60.759 55.000 31.36 15.99 35.57 3.41
1854 2181 0.038159 GATCGACCGGTCCATCCATC 60.038 60.000 26.52 16.77 35.57 3.51
1855 2182 1.472662 ATCGACCGGTCCATCCATCC 61.473 60.000 28.52 1.12 35.57 3.51
1856 2183 2.431454 CGACCGGTCCATCCATCCA 61.431 63.158 28.52 0.00 35.57 3.41
1857 2184 1.758440 CGACCGGTCCATCCATCCAT 61.758 60.000 28.52 0.00 35.57 3.41
1858 2185 0.035458 GACCGGTCCATCCATCCATC 59.965 60.000 24.75 0.00 35.57 3.51
1859 2186 1.376466 CCGGTCCATCCATCCATCC 59.624 63.158 0.00 0.00 35.57 3.51
1860 2187 1.418097 CCGGTCCATCCATCCATCCA 61.418 60.000 0.00 0.00 35.57 3.41
1861 2188 0.694771 CGGTCCATCCATCCATCCAT 59.305 55.000 0.00 0.00 35.57 3.41
1862 2189 1.339438 CGGTCCATCCATCCATCCATC 60.339 57.143 0.00 0.00 35.57 3.51
1863 2190 1.005215 GGTCCATCCATCCATCCATCC 59.995 57.143 0.00 0.00 35.97 3.51
1864 2191 1.706866 GTCCATCCATCCATCCATCCA 59.293 52.381 0.00 0.00 0.00 3.41
1865 2192 1.990327 TCCATCCATCCATCCATCCAG 59.010 52.381 0.00 0.00 0.00 3.86
1866 2193 1.616187 CCATCCATCCATCCATCCAGC 60.616 57.143 0.00 0.00 0.00 4.85
1867 2194 0.327259 ATCCATCCATCCATCCAGCG 59.673 55.000 0.00 0.00 0.00 5.18
1868 2195 1.970114 CCATCCATCCATCCAGCGC 60.970 63.158 0.00 0.00 0.00 5.92
1869 2196 1.228033 CATCCATCCATCCAGCGCA 60.228 57.895 11.47 0.00 0.00 6.09
1870 2197 0.820482 CATCCATCCATCCAGCGCAA 60.820 55.000 11.47 0.00 0.00 4.85
1871 2198 0.111832 ATCCATCCATCCAGCGCAAT 59.888 50.000 11.47 0.00 0.00 3.56
1872 2199 0.820482 TCCATCCATCCAGCGCAATG 60.820 55.000 11.47 10.33 0.00 2.82
1873 2200 1.105167 CCATCCATCCAGCGCAATGT 61.105 55.000 11.47 0.00 0.00 2.71
1874 2201 0.309922 CATCCATCCAGCGCAATGTC 59.690 55.000 11.47 0.00 0.00 3.06
1875 2202 1.162181 ATCCATCCAGCGCAATGTCG 61.162 55.000 11.47 0.00 0.00 4.35
1876 2203 1.815003 CCATCCAGCGCAATGTCGA 60.815 57.895 11.47 0.00 0.00 4.20
1877 2204 1.368345 CCATCCAGCGCAATGTCGAA 61.368 55.000 11.47 0.00 0.00 3.71
1878 2205 0.247814 CATCCAGCGCAATGTCGAAC 60.248 55.000 11.47 0.00 0.00 3.95
1879 2206 1.369091 ATCCAGCGCAATGTCGAACC 61.369 55.000 11.47 0.00 0.00 3.62
1880 2207 2.324330 CCAGCGCAATGTCGAACCA 61.324 57.895 11.47 0.00 0.00 3.67
1881 2208 1.573932 CAGCGCAATGTCGAACCAA 59.426 52.632 11.47 0.00 0.00 3.67
1882 2209 0.725784 CAGCGCAATGTCGAACCAAC 60.726 55.000 11.47 0.00 0.00 3.77
1883 2210 1.792057 GCGCAATGTCGAACCAACG 60.792 57.895 0.30 0.00 0.00 4.10
1884 2211 1.856688 CGCAATGTCGAACCAACGA 59.143 52.632 0.00 0.00 40.00 3.85
1885 2212 0.179250 CGCAATGTCGAACCAACGAG 60.179 55.000 0.00 0.00 42.88 4.18
1886 2213 0.452784 GCAATGTCGAACCAACGAGC 60.453 55.000 0.00 0.00 42.88 5.03
1887 2214 1.148310 CAATGTCGAACCAACGAGCT 58.852 50.000 0.00 0.00 42.88 4.09
1888 2215 2.333926 CAATGTCGAACCAACGAGCTA 58.666 47.619 0.00 0.00 42.88 3.32
1889 2216 1.992170 ATGTCGAACCAACGAGCTAC 58.008 50.000 0.00 0.00 42.88 3.58
1890 2217 0.956633 TGTCGAACCAACGAGCTACT 59.043 50.000 0.00 0.00 42.88 2.57
1891 2218 1.335597 TGTCGAACCAACGAGCTACTG 60.336 52.381 0.00 0.00 42.88 2.74
1892 2219 0.956633 TCGAACCAACGAGCTACTGT 59.043 50.000 0.00 0.00 37.37 3.55
1893 2220 1.068748 TCGAACCAACGAGCTACTGTC 60.069 52.381 0.00 0.00 37.37 3.51
1894 2221 1.335597 CGAACCAACGAGCTACTGTCA 60.336 52.381 0.00 0.00 35.09 3.58
1895 2222 2.750948 GAACCAACGAGCTACTGTCAA 58.249 47.619 0.00 0.00 0.00 3.18
1896 2223 2.150397 ACCAACGAGCTACTGTCAAC 57.850 50.000 0.00 0.00 0.00 3.18
1897 2224 1.687123 ACCAACGAGCTACTGTCAACT 59.313 47.619 0.00 0.00 0.00 3.16
1898 2225 2.288273 ACCAACGAGCTACTGTCAACTC 60.288 50.000 0.00 0.00 0.00 3.01
1899 2226 2.329379 CAACGAGCTACTGTCAACTCC 58.671 52.381 0.00 0.00 0.00 3.85
1900 2227 0.522180 ACGAGCTACTGTCAACTCCG 59.478 55.000 0.00 0.00 0.00 4.63
1901 2228 0.522180 CGAGCTACTGTCAACTCCGT 59.478 55.000 0.00 0.00 0.00 4.69
1902 2229 1.466024 CGAGCTACTGTCAACTCCGTC 60.466 57.143 0.00 0.00 0.00 4.79
1903 2230 0.889306 AGCTACTGTCAACTCCGTCC 59.111 55.000 0.00 0.00 0.00 4.79
1904 2231 0.889306 GCTACTGTCAACTCCGTCCT 59.111 55.000 0.00 0.00 0.00 3.85
1905 2232 1.135344 GCTACTGTCAACTCCGTCCTC 60.135 57.143 0.00 0.00 0.00 3.71
1906 2233 1.473278 CTACTGTCAACTCCGTCCTCC 59.527 57.143 0.00 0.00 0.00 4.30
1907 2234 1.186267 ACTGTCAACTCCGTCCTCCC 61.186 60.000 0.00 0.00 0.00 4.30
1908 2235 1.152419 TGTCAACTCCGTCCTCCCA 60.152 57.895 0.00 0.00 0.00 4.37
1909 2236 1.185618 TGTCAACTCCGTCCTCCCAG 61.186 60.000 0.00 0.00 0.00 4.45
1910 2237 1.155390 TCAACTCCGTCCTCCCAGT 59.845 57.895 0.00 0.00 0.00 4.00
1911 2238 0.471211 TCAACTCCGTCCTCCCAGTT 60.471 55.000 0.00 0.00 0.00 3.16
1912 2239 0.396811 CAACTCCGTCCTCCCAGTTT 59.603 55.000 0.00 0.00 0.00 2.66
1913 2240 1.621814 CAACTCCGTCCTCCCAGTTTA 59.378 52.381 0.00 0.00 0.00 2.01
1914 2241 1.558233 ACTCCGTCCTCCCAGTTTAG 58.442 55.000 0.00 0.00 0.00 1.85
1915 2242 1.203149 ACTCCGTCCTCCCAGTTTAGT 60.203 52.381 0.00 0.00 0.00 2.24
1916 2243 1.204941 CTCCGTCCTCCCAGTTTAGTG 59.795 57.143 0.00 0.00 0.00 2.74
1917 2244 1.203087 TCCGTCCTCCCAGTTTAGTGA 60.203 52.381 0.00 0.00 0.00 3.41
1918 2245 1.621814 CCGTCCTCCCAGTTTAGTGAA 59.378 52.381 0.00 0.00 0.00 3.18
1919 2246 2.353803 CCGTCCTCCCAGTTTAGTGAAG 60.354 54.545 0.00 0.00 0.00 3.02
1920 2247 2.701107 GTCCTCCCAGTTTAGTGAAGC 58.299 52.381 0.00 0.00 0.00 3.86
1921 2248 2.038557 GTCCTCCCAGTTTAGTGAAGCA 59.961 50.000 0.00 0.00 0.00 3.91
1922 2249 2.038557 TCCTCCCAGTTTAGTGAAGCAC 59.961 50.000 0.00 0.00 34.10 4.40
1924 2251 3.260884 CCTCCCAGTTTAGTGAAGCACTA 59.739 47.826 3.32 3.32 43.46 2.74
1925 2252 4.499183 CTCCCAGTTTAGTGAAGCACTAG 58.501 47.826 7.29 0.00 45.83 2.57
1926 2253 3.901844 TCCCAGTTTAGTGAAGCACTAGT 59.098 43.478 7.29 0.00 45.83 2.57
1927 2254 3.997021 CCCAGTTTAGTGAAGCACTAGTG 59.003 47.826 18.93 18.93 45.83 2.74
1944 2271 7.027778 CACTAGTGCCTGAAATTAATAACCC 57.972 40.000 10.54 0.00 0.00 4.11
1945 2272 5.820947 ACTAGTGCCTGAAATTAATAACCCG 59.179 40.000 0.00 0.00 0.00 5.28
1946 2273 3.951680 AGTGCCTGAAATTAATAACCCGG 59.048 43.478 0.00 0.00 0.00 5.73
1947 2274 3.697542 GTGCCTGAAATTAATAACCCGGT 59.302 43.478 0.00 0.00 0.00 5.28
1948 2275 4.158949 GTGCCTGAAATTAATAACCCGGTT 59.841 41.667 8.17 8.17 0.00 4.44
1949 2276 4.773149 TGCCTGAAATTAATAACCCGGTTT 59.227 37.500 8.44 0.00 0.00 3.27
1950 2277 5.106442 GCCTGAAATTAATAACCCGGTTTG 58.894 41.667 8.44 0.00 0.00 2.93
1951 2278 5.106442 CCTGAAATTAATAACCCGGTTTGC 58.894 41.667 8.44 0.00 0.00 3.68
1952 2279 5.105513 CCTGAAATTAATAACCCGGTTTGCT 60.106 40.000 8.44 0.00 0.00 3.91
1953 2280 5.715070 TGAAATTAATAACCCGGTTTGCTG 58.285 37.500 8.44 0.00 0.00 4.41
1954 2281 3.793797 ATTAATAACCCGGTTTGCTGC 57.206 42.857 8.44 0.00 0.00 5.25
1955 2282 2.201921 TAATAACCCGGTTTGCTGCA 57.798 45.000 8.44 0.00 0.00 4.41
1956 2283 1.555967 AATAACCCGGTTTGCTGCAT 58.444 45.000 8.44 0.00 0.00 3.96
1957 2284 0.817013 ATAACCCGGTTTGCTGCATG 59.183 50.000 8.44 0.00 0.00 4.06
1958 2285 0.538516 TAACCCGGTTTGCTGCATGT 60.539 50.000 8.44 0.00 0.00 3.21
1959 2286 2.086251 AACCCGGTTTGCTGCATGTG 62.086 55.000 1.84 0.00 0.00 3.21
1960 2287 2.259204 CCGGTTTGCTGCATGTGG 59.741 61.111 1.84 0.00 0.00 4.17
1961 2288 2.431260 CGGTTTGCTGCATGTGGC 60.431 61.111 1.84 0.00 45.13 5.01
1981 2308 2.789893 GCGAGTAGCTTGTAGTATGTGC 59.210 50.000 0.00 0.00 44.04 4.57
1982 2309 3.036633 CGAGTAGCTTGTAGTATGTGCG 58.963 50.000 0.00 0.00 0.00 5.34
1983 2310 3.242641 CGAGTAGCTTGTAGTATGTGCGA 60.243 47.826 0.00 0.00 0.00 5.10
1984 2311 4.554919 CGAGTAGCTTGTAGTATGTGCGAT 60.555 45.833 0.00 0.00 0.00 4.58
1985 2312 4.611943 AGTAGCTTGTAGTATGTGCGATG 58.388 43.478 0.00 0.00 0.00 3.84
1986 2313 3.526931 AGCTTGTAGTATGTGCGATGT 57.473 42.857 0.00 0.00 0.00 3.06
1987 2314 3.190079 AGCTTGTAGTATGTGCGATGTG 58.810 45.455 0.00 0.00 0.00 3.21
1988 2315 2.285220 GCTTGTAGTATGTGCGATGTGG 59.715 50.000 0.00 0.00 0.00 4.17
1989 2316 1.934589 TGTAGTATGTGCGATGTGGC 58.065 50.000 0.00 0.00 0.00 5.01
1990 2317 1.205893 TGTAGTATGTGCGATGTGGCA 59.794 47.619 0.00 0.00 41.45 4.92
1991 2318 2.158971 TGTAGTATGTGCGATGTGGCAT 60.159 45.455 0.00 0.00 45.99 4.40
1992 2319 2.042686 AGTATGTGCGATGTGGCATT 57.957 45.000 0.00 0.00 45.99 3.56
1993 2320 1.672363 AGTATGTGCGATGTGGCATTG 59.328 47.619 0.00 0.00 45.99 2.82
1994 2321 1.401552 GTATGTGCGATGTGGCATTGT 59.598 47.619 0.00 0.00 45.99 2.71
1995 2322 0.452987 ATGTGCGATGTGGCATTGTC 59.547 50.000 0.00 0.00 45.99 3.18
1996 2323 0.606130 TGTGCGATGTGGCATTGTCT 60.606 50.000 0.00 0.00 45.99 3.41
1997 2324 0.179181 GTGCGATGTGGCATTGTCTG 60.179 55.000 0.00 0.00 45.99 3.51
1998 2325 0.606130 TGCGATGTGGCATTGTCTGT 60.606 50.000 0.00 0.00 38.17 3.41
1999 2326 1.338579 TGCGATGTGGCATTGTCTGTA 60.339 47.619 0.00 0.00 38.17 2.74
2000 2327 1.737236 GCGATGTGGCATTGTCTGTAA 59.263 47.619 0.00 0.00 0.00 2.41
2001 2328 2.355756 GCGATGTGGCATTGTCTGTAAT 59.644 45.455 0.00 0.00 0.00 1.89
2002 2329 3.789791 GCGATGTGGCATTGTCTGTAATG 60.790 47.826 0.00 0.00 40.25 1.90
2011 2338 5.530519 CATTGTCTGTAATGCGTGTAACT 57.469 39.130 0.00 0.00 31.96 2.24
2012 2339 5.927030 CATTGTCTGTAATGCGTGTAACTT 58.073 37.500 0.00 0.00 31.96 2.66
2013 2340 7.056002 CATTGTCTGTAATGCGTGTAACTTA 57.944 36.000 0.00 0.00 31.96 2.24
2014 2341 7.514805 CATTGTCTGTAATGCGTGTAACTTAA 58.485 34.615 0.00 0.00 31.96 1.85
2015 2342 7.661127 TTGTCTGTAATGCGTGTAACTTAAT 57.339 32.000 0.00 0.00 31.75 1.40
2016 2343 7.661127 TGTCTGTAATGCGTGTAACTTAATT 57.339 32.000 0.00 0.00 31.75 1.40
2017 2344 8.760103 TGTCTGTAATGCGTGTAACTTAATTA 57.240 30.769 0.00 0.00 31.75 1.40
2018 2345 9.373603 TGTCTGTAATGCGTGTAACTTAATTAT 57.626 29.630 0.00 0.00 31.75 1.28
2019 2346 9.632969 GTCTGTAATGCGTGTAACTTAATTATG 57.367 33.333 0.00 0.00 31.75 1.90
2020 2347 9.373603 TCTGTAATGCGTGTAACTTAATTATGT 57.626 29.630 0.00 0.00 31.75 2.29
2021 2348 9.420966 CTGTAATGCGTGTAACTTAATTATGTG 57.579 33.333 4.88 0.00 31.75 3.21
2022 2349 8.937884 TGTAATGCGTGTAACTTAATTATGTGT 58.062 29.630 4.88 0.00 31.75 3.72
2023 2350 9.763465 GTAATGCGTGTAACTTAATTATGTGTT 57.237 29.630 4.88 4.95 31.75 3.32
2024 2351 8.667987 AATGCGTGTAACTTAATTATGTGTTG 57.332 30.769 4.88 0.00 31.75 3.33
2025 2352 7.192148 TGCGTGTAACTTAATTATGTGTTGT 57.808 32.000 4.88 0.00 31.75 3.32
2026 2353 7.640852 TGCGTGTAACTTAATTATGTGTTGTT 58.359 30.769 4.88 0.00 31.75 2.83
2027 2354 8.771766 TGCGTGTAACTTAATTATGTGTTGTTA 58.228 29.630 4.88 0.00 31.75 2.41
2028 2355 9.257865 GCGTGTAACTTAATTATGTGTTGTTAG 57.742 33.333 4.88 0.00 31.75 2.34
2041 2368 9.634163 TTATGTGTTGTTAGTGTAGTACTCATG 57.366 33.333 0.00 0.00 40.89 3.07
2042 2369 7.279750 TGTGTTGTTAGTGTAGTACTCATGA 57.720 36.000 0.00 0.00 40.89 3.07
2043 2370 7.892609 TGTGTTGTTAGTGTAGTACTCATGAT 58.107 34.615 0.00 0.00 40.89 2.45
2044 2371 7.812669 TGTGTTGTTAGTGTAGTACTCATGATG 59.187 37.037 0.00 0.00 40.89 3.07
2045 2372 8.027189 GTGTTGTTAGTGTAGTACTCATGATGA 58.973 37.037 0.00 0.00 40.89 2.92
2068 2395 3.626028 ACGCAGTTCCTTTTCATGTTC 57.374 42.857 0.00 0.00 37.78 3.18
2069 2396 2.293399 ACGCAGTTCCTTTTCATGTTCC 59.707 45.455 0.00 0.00 37.78 3.62
2070 2397 2.351738 CGCAGTTCCTTTTCATGTTCCC 60.352 50.000 0.00 0.00 0.00 3.97
2071 2398 2.893489 GCAGTTCCTTTTCATGTTCCCT 59.107 45.455 0.00 0.00 0.00 4.20
2072 2399 3.305608 GCAGTTCCTTTTCATGTTCCCTG 60.306 47.826 0.00 0.00 0.00 4.45
2073 2400 2.893489 AGTTCCTTTTCATGTTCCCTGC 59.107 45.455 0.00 0.00 0.00 4.85
2074 2401 1.923356 TCCTTTTCATGTTCCCTGCC 58.077 50.000 0.00 0.00 0.00 4.85
2075 2402 1.146774 TCCTTTTCATGTTCCCTGCCA 59.853 47.619 0.00 0.00 0.00 4.92
2076 2403 1.273327 CCTTTTCATGTTCCCTGCCAC 59.727 52.381 0.00 0.00 0.00 5.01
2077 2404 0.958091 TTTTCATGTTCCCTGCCACG 59.042 50.000 0.00 0.00 0.00 4.94
2078 2405 0.893270 TTTCATGTTCCCTGCCACGG 60.893 55.000 0.00 0.00 0.00 4.94
2079 2406 1.773856 TTCATGTTCCCTGCCACGGA 61.774 55.000 0.00 0.00 0.00 4.69
2080 2407 2.040544 CATGTTCCCTGCCACGGAC 61.041 63.158 0.00 0.00 0.00 4.79
2081 2408 2.525124 ATGTTCCCTGCCACGGACA 61.525 57.895 0.00 0.00 0.00 4.02
2082 2409 2.358737 GTTCCCTGCCACGGACAG 60.359 66.667 0.00 0.00 34.82 3.51
2083 2410 2.847234 TTCCCTGCCACGGACAGT 60.847 61.111 6.72 0.00 33.09 3.55
2084 2411 2.879233 TTCCCTGCCACGGACAGTC 61.879 63.158 0.00 0.00 33.09 3.51
2085 2412 4.394712 CCCTGCCACGGACAGTCC 62.395 72.222 9.92 9.92 33.09 3.85
2086 2413 3.314331 CCTGCCACGGACAGTCCT 61.314 66.667 17.95 1.93 33.30 3.85
2087 2414 2.047844 CTGCCACGGACAGTCCTG 60.048 66.667 17.95 13.69 33.30 3.86
2089 2416 2.383245 CTGCCACGGACAGTCCTGTT 62.383 60.000 17.95 0.00 45.05 3.16
2090 2417 1.227853 GCCACGGACAGTCCTGTTT 60.228 57.895 17.95 0.00 45.05 2.83
2091 2418 0.034337 GCCACGGACAGTCCTGTTTA 59.966 55.000 17.95 0.00 45.05 2.01
2092 2419 1.939838 GCCACGGACAGTCCTGTTTAG 60.940 57.143 17.95 3.25 45.05 1.85
2093 2420 1.337823 CCACGGACAGTCCTGTTTAGG 60.338 57.143 17.95 10.50 45.05 2.69
2094 2421 1.343465 CACGGACAGTCCTGTTTAGGT 59.657 52.381 17.95 3.17 45.05 3.08
2095 2422 2.044758 ACGGACAGTCCTGTTTAGGTT 58.955 47.619 17.95 0.00 45.05 3.50
2096 2423 2.436911 ACGGACAGTCCTGTTTAGGTTT 59.563 45.455 17.95 0.00 45.05 3.27
2097 2424 3.064931 CGGACAGTCCTGTTTAGGTTTC 58.935 50.000 17.95 0.00 45.05 2.78
2098 2425 3.244112 CGGACAGTCCTGTTTAGGTTTCT 60.244 47.826 17.95 0.00 45.05 2.52
2099 2426 4.065789 GGACAGTCCTGTTTAGGTTTCTG 58.934 47.826 12.94 0.00 45.05 3.02
2100 2427 4.202326 GGACAGTCCTGTTTAGGTTTCTGA 60.202 45.833 12.94 0.00 45.05 3.27
2101 2428 5.513267 GGACAGTCCTGTTTAGGTTTCTGAT 60.513 44.000 12.94 6.74 45.05 2.90
2102 2429 5.941788 ACAGTCCTGTTTAGGTTTCTGATT 58.058 37.500 16.04 1.37 44.88 2.57
2103 2430 7.074653 ACAGTCCTGTTTAGGTTTCTGATTA 57.925 36.000 16.04 0.00 44.88 1.75
2104 2431 7.690256 ACAGTCCTGTTTAGGTTTCTGATTAT 58.310 34.615 16.04 0.00 44.88 1.28
2105 2432 8.164070 ACAGTCCTGTTTAGGTTTCTGATTATT 58.836 33.333 16.04 0.45 44.88 1.40
2106 2433 8.454106 CAGTCCTGTTTAGGTTTCTGATTATTG 58.546 37.037 0.00 0.00 44.88 1.90
2107 2434 7.611855 AGTCCTGTTTAGGTTTCTGATTATTGG 59.388 37.037 0.00 0.00 44.88 3.16
2108 2435 7.610305 GTCCTGTTTAGGTTTCTGATTATTGGA 59.390 37.037 0.00 0.00 44.88 3.53
2109 2436 7.610305 TCCTGTTTAGGTTTCTGATTATTGGAC 59.390 37.037 0.00 0.00 44.88 4.02
2110 2437 7.393234 CCTGTTTAGGTTTCTGATTATTGGACA 59.607 37.037 0.00 0.00 39.39 4.02
2111 2438 8.698973 TGTTTAGGTTTCTGATTATTGGACAA 57.301 30.769 0.00 0.00 0.00 3.18
2112 2439 8.792633 TGTTTAGGTTTCTGATTATTGGACAAG 58.207 33.333 0.00 0.00 0.00 3.16
2113 2440 7.938140 TTAGGTTTCTGATTATTGGACAAGG 57.062 36.000 0.00 0.00 0.00 3.61
2114 2441 6.139679 AGGTTTCTGATTATTGGACAAGGA 57.860 37.500 0.00 0.00 0.00 3.36
2115 2442 6.183347 AGGTTTCTGATTATTGGACAAGGAG 58.817 40.000 0.00 0.00 0.00 3.69
2116 2443 5.358160 GGTTTCTGATTATTGGACAAGGAGG 59.642 44.000 0.00 0.00 0.00 4.30
2117 2444 5.779241 TTCTGATTATTGGACAAGGAGGT 57.221 39.130 0.00 0.00 0.00 3.85
2118 2445 5.102953 TCTGATTATTGGACAAGGAGGTG 57.897 43.478 0.00 0.00 0.00 4.00
2119 2446 3.620488 TGATTATTGGACAAGGAGGTGC 58.380 45.455 0.00 0.00 0.00 5.01
2120 2447 3.010027 TGATTATTGGACAAGGAGGTGCA 59.990 43.478 0.00 0.00 37.34 4.57
2121 2448 3.737559 TTATTGGACAAGGAGGTGCAT 57.262 42.857 0.00 0.00 38.94 3.96
2122 2449 1.843368 ATTGGACAAGGAGGTGCATG 58.157 50.000 0.00 0.00 38.94 4.06
2123 2450 0.770499 TTGGACAAGGAGGTGCATGA 59.230 50.000 0.00 0.00 38.94 3.07
2124 2451 0.994247 TGGACAAGGAGGTGCATGAT 59.006 50.000 0.00 0.00 33.98 2.45
2125 2452 1.355381 TGGACAAGGAGGTGCATGATT 59.645 47.619 0.00 0.00 33.98 2.57
2126 2453 1.747355 GGACAAGGAGGTGCATGATTG 59.253 52.381 0.00 0.00 0.00 2.67
2127 2454 2.440409 GACAAGGAGGTGCATGATTGT 58.560 47.619 0.00 0.00 33.82 2.71
2128 2455 2.821969 GACAAGGAGGTGCATGATTGTT 59.178 45.455 0.00 0.00 31.44 2.83
2129 2456 2.821969 ACAAGGAGGTGCATGATTGTTC 59.178 45.455 0.00 0.00 0.00 3.18
2130 2457 3.087031 CAAGGAGGTGCATGATTGTTCT 58.913 45.455 0.00 0.00 0.00 3.01
2131 2458 3.446442 AGGAGGTGCATGATTGTTCTT 57.554 42.857 0.00 0.00 0.00 2.52
2132 2459 3.087031 AGGAGGTGCATGATTGTTCTTG 58.913 45.455 0.00 0.00 0.00 3.02
2133 2460 2.821969 GGAGGTGCATGATTGTTCTTGT 59.178 45.455 0.00 0.00 31.38 3.16
2134 2461 3.119708 GGAGGTGCATGATTGTTCTTGTC 60.120 47.826 0.00 0.00 31.38 3.18
2135 2462 2.485426 AGGTGCATGATTGTTCTTGTCG 59.515 45.455 0.00 0.00 31.38 4.35
2136 2463 2.483877 GGTGCATGATTGTTCTTGTCGA 59.516 45.455 0.00 0.00 31.38 4.20
2137 2464 3.127548 GGTGCATGATTGTTCTTGTCGAT 59.872 43.478 0.00 0.00 31.38 3.59
2138 2465 4.379813 GGTGCATGATTGTTCTTGTCGATT 60.380 41.667 0.00 0.00 31.38 3.34
2139 2466 5.163764 GGTGCATGATTGTTCTTGTCGATTA 60.164 40.000 0.00 0.00 31.38 1.75
2140 2467 6.458751 GGTGCATGATTGTTCTTGTCGATTAT 60.459 38.462 0.00 0.00 31.38 1.28
2141 2468 6.968904 GTGCATGATTGTTCTTGTCGATTATT 59.031 34.615 0.00 0.00 31.38 1.40
2142 2469 8.122330 GTGCATGATTGTTCTTGTCGATTATTA 58.878 33.333 0.00 0.00 31.38 0.98
2143 2470 8.122330 TGCATGATTGTTCTTGTCGATTATTAC 58.878 33.333 0.00 0.00 31.38 1.89
2144 2471 7.587757 GCATGATTGTTCTTGTCGATTATTACC 59.412 37.037 0.00 0.00 31.38 2.85
2145 2472 7.548196 TGATTGTTCTTGTCGATTATTACCC 57.452 36.000 0.00 0.00 0.00 3.69
2146 2473 6.256975 TGATTGTTCTTGTCGATTATTACCCG 59.743 38.462 0.00 0.00 0.00 5.28
2147 2474 5.075858 TGTTCTTGTCGATTATTACCCGT 57.924 39.130 0.00 0.00 0.00 5.28
2148 2475 5.104374 TGTTCTTGTCGATTATTACCCGTC 58.896 41.667 0.00 0.00 0.00 4.79
2149 2476 5.105635 TGTTCTTGTCGATTATTACCCGTCT 60.106 40.000 0.00 0.00 0.00 4.18
2150 2477 5.179045 TCTTGTCGATTATTACCCGTCTC 57.821 43.478 0.00 0.00 0.00 3.36
2151 2478 4.641541 TCTTGTCGATTATTACCCGTCTCA 59.358 41.667 0.00 0.00 0.00 3.27
2152 2479 4.297299 TGTCGATTATTACCCGTCTCAC 57.703 45.455 0.00 0.00 0.00 3.51
2153 2480 3.067180 TGTCGATTATTACCCGTCTCACC 59.933 47.826 0.00 0.00 0.00 4.02
2154 2481 3.067180 GTCGATTATTACCCGTCTCACCA 59.933 47.826 0.00 0.00 0.00 4.17
2155 2482 3.700539 TCGATTATTACCCGTCTCACCAA 59.299 43.478 0.00 0.00 0.00 3.67
2156 2483 4.160065 TCGATTATTACCCGTCTCACCAAA 59.840 41.667 0.00 0.00 0.00 3.28
2157 2484 4.871557 CGATTATTACCCGTCTCACCAAAA 59.128 41.667 0.00 0.00 0.00 2.44
2158 2485 5.526111 CGATTATTACCCGTCTCACCAAAAT 59.474 40.000 0.00 0.00 0.00 1.82
2159 2486 6.702723 CGATTATTACCCGTCTCACCAAAATA 59.297 38.462 0.00 0.00 0.00 1.40
2160 2487 7.386848 CGATTATTACCCGTCTCACCAAAATAT 59.613 37.037 0.00 0.00 0.00 1.28
2161 2488 9.715121 GATTATTACCCGTCTCACCAAAATATA 57.285 33.333 0.00 0.00 0.00 0.86
2163 2490 9.550406 TTATTACCCGTCTCACCAAAATATAAG 57.450 33.333 0.00 0.00 0.00 1.73
2164 2491 5.687166 ACCCGTCTCACCAAAATATAAGA 57.313 39.130 0.00 0.00 0.00 2.10
2165 2492 6.057321 ACCCGTCTCACCAAAATATAAGAA 57.943 37.500 0.00 0.00 0.00 2.52
2166 2493 6.113411 ACCCGTCTCACCAAAATATAAGAAG 58.887 40.000 0.00 0.00 0.00 2.85
2167 2494 6.113411 CCCGTCTCACCAAAATATAAGAAGT 58.887 40.000 0.00 0.00 0.00 3.01
2168 2495 6.598064 CCCGTCTCACCAAAATATAAGAAGTT 59.402 38.462 0.00 0.00 0.00 2.66
2169 2496 7.120726 CCCGTCTCACCAAAATATAAGAAGTTT 59.879 37.037 0.00 0.00 0.00 2.66
2170 2497 8.512138 CCGTCTCACCAAAATATAAGAAGTTTT 58.488 33.333 0.00 0.00 0.00 2.43
2171 2498 9.893305 CGTCTCACCAAAATATAAGAAGTTTTT 57.107 29.630 0.00 0.00 0.00 1.94
2173 2500 9.691362 TCTCACCAAAATATAAGAAGTTTTTGC 57.309 29.630 0.00 0.00 37.60 3.68
2174 2501 9.474920 CTCACCAAAATATAAGAAGTTTTTGCA 57.525 29.630 0.00 0.00 37.60 4.08
2175 2502 9.474920 TCACCAAAATATAAGAAGTTTTTGCAG 57.525 29.630 0.00 0.00 37.60 4.41
2176 2503 9.260002 CACCAAAATATAAGAAGTTTTTGCAGT 57.740 29.630 0.00 0.00 37.60 4.40
2177 2504 9.830975 ACCAAAATATAAGAAGTTTTTGCAGTT 57.169 25.926 0.00 0.00 37.60 3.16
2185 2512 7.671495 AAGAAGTTTTTGCAGTTCAATTTGT 57.329 28.000 0.00 0.00 34.12 2.83
2186 2513 7.294676 AGAAGTTTTTGCAGTTCAATTTGTC 57.705 32.000 0.00 0.00 34.12 3.18
2187 2514 7.099120 AGAAGTTTTTGCAGTTCAATTTGTCT 58.901 30.769 0.00 0.00 34.12 3.41
2188 2515 7.603784 AGAAGTTTTTGCAGTTCAATTTGTCTT 59.396 29.630 0.00 0.00 34.12 3.01
2189 2516 8.770438 AAGTTTTTGCAGTTCAATTTGTCTTA 57.230 26.923 0.00 0.00 34.12 2.10
2190 2517 8.947055 AGTTTTTGCAGTTCAATTTGTCTTAT 57.053 26.923 0.00 0.00 34.12 1.73
2197 2524 9.421806 TGCAGTTCAATTTGTCTTATATTTTGG 57.578 29.630 0.00 0.00 0.00 3.28
2198 2525 8.872845 GCAGTTCAATTTGTCTTATATTTTGGG 58.127 33.333 0.00 0.00 0.00 4.12
2201 2528 9.366216 GTTCAATTTGTCTTATATTTTGGGACC 57.634 33.333 0.00 0.00 0.00 4.46
2202 2529 7.767261 TCAATTTGTCTTATATTTTGGGACCG 58.233 34.615 0.00 0.00 0.00 4.79
2203 2530 7.612244 TCAATTTGTCTTATATTTTGGGACCGA 59.388 33.333 0.00 0.00 0.00 4.69
2204 2531 6.995511 TTTGTCTTATATTTTGGGACCGAG 57.004 37.500 0.00 0.00 0.00 4.63
2205 2532 5.031066 TGTCTTATATTTTGGGACCGAGG 57.969 43.478 0.00 0.00 0.00 4.63
2206 2533 4.472108 TGTCTTATATTTTGGGACCGAGGT 59.528 41.667 0.00 0.00 0.00 3.85
2207 2534 5.662208 TGTCTTATATTTTGGGACCGAGGTA 59.338 40.000 0.00 0.00 0.00 3.08
2208 2535 6.183360 TGTCTTATATTTTGGGACCGAGGTAG 60.183 42.308 0.00 0.00 0.00 3.18
2209 2536 6.041296 GTCTTATATTTTGGGACCGAGGTAGA 59.959 42.308 0.00 0.00 0.00 2.59
2210 2537 4.957684 ATATTTTGGGACCGAGGTAGAG 57.042 45.455 0.00 0.00 0.00 2.43
2211 2538 1.272807 TTTTGGGACCGAGGTAGAGG 58.727 55.000 0.00 0.00 0.00 3.69
2212 2539 0.410663 TTTGGGACCGAGGTAGAGGA 59.589 55.000 0.00 0.00 0.00 3.71
2213 2540 0.324091 TTGGGACCGAGGTAGAGGAC 60.324 60.000 0.00 0.00 0.00 3.85
2214 2541 1.305623 GGGACCGAGGTAGAGGACA 59.694 63.158 0.00 0.00 0.00 4.02
2215 2542 1.036481 GGGACCGAGGTAGAGGACAC 61.036 65.000 0.00 0.00 0.00 3.67
2216 2543 1.036481 GGACCGAGGTAGAGGACACC 61.036 65.000 0.00 0.00 36.22 4.16
2217 2544 0.323178 GACCGAGGTAGAGGACACCA 60.323 60.000 0.00 0.00 38.62 4.17
2218 2545 0.113776 ACCGAGGTAGAGGACACCAA 59.886 55.000 0.00 0.00 38.62 3.67
2219 2546 1.263356 CCGAGGTAGAGGACACCAAA 58.737 55.000 0.00 0.00 38.62 3.28
2220 2547 1.621814 CCGAGGTAGAGGACACCAAAA 59.378 52.381 0.00 0.00 38.62 2.44
2221 2548 2.236395 CCGAGGTAGAGGACACCAAAAT 59.764 50.000 0.00 0.00 38.62 1.82
2222 2549 3.449737 CCGAGGTAGAGGACACCAAAATA 59.550 47.826 0.00 0.00 38.62 1.40
2223 2550 4.101119 CCGAGGTAGAGGACACCAAAATAT 59.899 45.833 0.00 0.00 38.62 1.28
2224 2551 5.303589 CCGAGGTAGAGGACACCAAAATATA 59.696 44.000 0.00 0.00 38.62 0.86
2225 2552 6.183360 CCGAGGTAGAGGACACCAAAATATAA 60.183 42.308 0.00 0.00 38.62 0.98
2226 2553 6.924060 CGAGGTAGAGGACACCAAAATATAAG 59.076 42.308 0.00 0.00 38.62 1.73
2227 2554 7.201884 CGAGGTAGAGGACACCAAAATATAAGA 60.202 40.741 0.00 0.00 38.62 2.10
2228 2555 7.793036 AGGTAGAGGACACCAAAATATAAGAC 58.207 38.462 0.00 0.00 38.62 3.01
2229 2556 6.700520 GGTAGAGGACACCAAAATATAAGACG 59.299 42.308 0.00 0.00 36.01 4.18
2230 2557 6.295719 AGAGGACACCAAAATATAAGACGT 57.704 37.500 0.00 0.00 0.00 4.34
2231 2558 6.106673 AGAGGACACCAAAATATAAGACGTG 58.893 40.000 0.00 0.00 0.00 4.49
2258 2586 4.041075 TCACAACCCTAGTTCAGTAATGCA 59.959 41.667 0.00 0.00 32.45 3.96
2260 2588 5.415701 CACAACCCTAGTTCAGTAATGCATT 59.584 40.000 17.56 17.56 32.45 3.56
2261 2589 6.010219 ACAACCCTAGTTCAGTAATGCATTT 58.990 36.000 18.75 0.00 32.45 2.32
2262 2590 6.071952 ACAACCCTAGTTCAGTAATGCATTTG 60.072 38.462 18.75 11.04 32.45 2.32
2264 2592 4.339247 CCCTAGTTCAGTAATGCATTTGGG 59.661 45.833 18.75 8.75 0.00 4.12
2266 2594 5.418840 CCTAGTTCAGTAATGCATTTGGGTT 59.581 40.000 18.75 0.00 0.00 4.11
2267 2595 6.601613 CCTAGTTCAGTAATGCATTTGGGTTA 59.398 38.462 18.75 0.00 0.00 2.85
2268 2596 6.515272 AGTTCAGTAATGCATTTGGGTTAG 57.485 37.500 18.75 1.70 0.00 2.34
2274 2602 6.256321 CAGTAATGCATTTGGGTTAGATTTGC 59.744 38.462 18.75 0.00 0.00 3.68
2275 2603 4.822685 ATGCATTTGGGTTAGATTTGCA 57.177 36.364 0.00 0.00 42.15 4.08
2353 2682 6.825721 CCTAGCACCAGAAAGAATTCAATAGT 59.174 38.462 8.44 0.00 38.06 2.12
2421 2751 9.865321 AAAATGTTCATGATTTCTGATAAGGTG 57.135 29.630 0.00 0.00 0.00 4.00
2422 2752 8.812513 AATGTTCATGATTTCTGATAAGGTGA 57.187 30.769 0.00 0.00 0.00 4.02
2566 2898 7.015098 TCCAATAATTCTGAAACTTTTGCTGGA 59.985 33.333 0.00 0.00 0.00 3.86
2578 2910 3.928727 TTTGCTGGAGCTCTGAAATTG 57.071 42.857 14.64 0.00 42.66 2.32
2699 3032 5.512942 TTTGGAGAGAGAGAGAGAGAAGA 57.487 43.478 0.00 0.00 0.00 2.87
2700 3033 5.512942 TTGGAGAGAGAGAGAGAGAAGAA 57.487 43.478 0.00 0.00 0.00 2.52
2709 3042 6.884836 AGAGAGAGAGAGAAGAAACTTACCTC 59.115 42.308 0.00 0.00 0.00 3.85
2713 3046 3.166679 AGAGAAGAAACTTACCTCGGCT 58.833 45.455 0.00 0.00 0.00 5.52
2714 3047 3.579151 AGAGAAGAAACTTACCTCGGCTT 59.421 43.478 0.00 0.00 0.00 4.35
2715 3048 3.665190 AGAAGAAACTTACCTCGGCTTG 58.335 45.455 0.00 0.00 0.00 4.01
2720 3053 4.040095 AGAAACTTACCTCGGCTTGTTACT 59.960 41.667 0.00 0.00 0.00 2.24
2721 3054 3.314541 ACTTACCTCGGCTTGTTACTG 57.685 47.619 0.00 0.00 0.00 2.74
2722 3055 2.631545 ACTTACCTCGGCTTGTTACTGT 59.368 45.455 0.00 0.00 0.00 3.55
2723 3056 3.828451 ACTTACCTCGGCTTGTTACTGTA 59.172 43.478 0.00 0.00 0.00 2.74
2733 3066 0.037697 TGTTACTGTAGCAGCCCACG 60.038 55.000 0.00 0.00 34.37 4.94
2734 3067 0.245539 GTTACTGTAGCAGCCCACGA 59.754 55.000 0.00 0.00 34.37 4.35
2754 3092 4.415150 CCCACAGCGCCACCATCT 62.415 66.667 2.29 0.00 0.00 2.90
2759 3097 0.957395 ACAGCGCCACCATCTTCAAG 60.957 55.000 2.29 0.00 0.00 3.02
2762 3100 1.798735 CGCCACCATCTTCAAGCTG 59.201 57.895 0.00 0.00 0.00 4.24
2769 3107 0.452184 CATCTTCAAGCTGCTGCCAG 59.548 55.000 12.44 5.26 42.13 4.85
2770 3108 0.680280 ATCTTCAAGCTGCTGCCAGG 60.680 55.000 12.44 2.25 39.54 4.45
2774 3112 2.932194 AAGCTGCTGCCAGGAGGA 60.932 61.111 15.43 0.00 39.54 3.71
2775 3113 2.307162 AAGCTGCTGCCAGGAGGAT 61.307 57.895 15.43 0.00 39.54 3.24
2777 3115 2.516460 CTGCTGCCAGGAGGATGC 60.516 66.667 5.15 0.00 36.89 3.91
2778 3116 4.119363 TGCTGCCAGGAGGATGCC 62.119 66.667 0.00 0.00 36.89 4.40
2780 3118 3.473647 CTGCCAGGAGGATGCCGA 61.474 66.667 0.00 0.00 36.89 5.54
2831 3169 4.320456 CACGTCCTGCCTGCCTGT 62.320 66.667 0.00 0.00 0.00 4.00
2832 3170 3.560251 ACGTCCTGCCTGCCTGTT 61.560 61.111 0.00 0.00 0.00 3.16
2833 3171 3.052082 CGTCCTGCCTGCCTGTTG 61.052 66.667 0.00 0.00 0.00 3.33
2834 3172 3.368571 GTCCTGCCTGCCTGTTGC 61.369 66.667 0.00 0.00 41.77 4.17
2835 3173 4.666253 TCCTGCCTGCCTGTTGCC 62.666 66.667 0.00 0.00 40.16 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.213799 GTTCAATAAATTTAAATCCAGCACCAA 57.786 29.630 1.21 0.00 0.00 3.67
51 52 7.260603 AGCAATTCAGCTACACATTTAAATCC 58.739 34.615 0.00 0.00 44.50 3.01
67 68 8.379457 TGAATCAGAGATTGATAGCAATTCAG 57.621 34.615 7.78 5.13 45.82 3.02
84 85 5.645067 CCATGCAGTCTTACTTTGAATCAGA 59.355 40.000 0.00 0.00 0.00 3.27
85 86 5.675575 GCCATGCAGTCTTACTTTGAATCAG 60.676 44.000 0.00 0.00 0.00 2.90
153 186 1.006337 CAACCCGGTGCACCAAATG 60.006 57.895 34.16 22.06 35.14 2.32
159 192 2.177044 GTTATCCAACCCGGTGCAC 58.823 57.895 8.80 8.80 35.57 4.57
175 208 0.778479 ACAATGGGTAGGGGGTGGTT 60.778 55.000 0.00 0.00 0.00 3.67
176 209 0.121608 TACAATGGGTAGGGGGTGGT 59.878 55.000 0.00 0.00 0.00 4.16
190 223 1.392168 CGTCAAATGTCCGCGTACAAT 59.608 47.619 9.06 0.00 32.02 2.71
195 247 1.554042 GACACGTCAAATGTCCGCGT 61.554 55.000 4.92 0.00 40.56 6.01
200 252 3.311322 TCAAACTGGACACGTCAAATGTC 59.689 43.478 0.00 0.00 44.80 3.06
201 253 3.275143 TCAAACTGGACACGTCAAATGT 58.725 40.909 0.00 0.00 0.00 2.71
202 254 3.961477 TCAAACTGGACACGTCAAATG 57.039 42.857 0.00 0.00 0.00 2.32
203 255 3.304659 GCATCAAACTGGACACGTCAAAT 60.305 43.478 0.00 0.00 0.00 2.32
204 256 2.032799 GCATCAAACTGGACACGTCAAA 59.967 45.455 0.00 0.00 0.00 2.69
205 257 1.601903 GCATCAAACTGGACACGTCAA 59.398 47.619 0.00 0.00 0.00 3.18
206 258 1.225855 GCATCAAACTGGACACGTCA 58.774 50.000 0.00 0.00 0.00 4.35
207 259 1.069906 GTGCATCAAACTGGACACGTC 60.070 52.381 0.00 0.00 37.42 4.34
208 260 0.944386 GTGCATCAAACTGGACACGT 59.056 50.000 0.00 0.00 37.42 4.49
209 261 1.069703 CAGTGCATCAAACTGGACACG 60.070 52.381 0.00 0.00 41.13 4.49
210 262 1.335324 GCAGTGCATCAAACTGGACAC 60.335 52.381 11.09 0.00 44.29 3.67
211 263 0.953727 GCAGTGCATCAAACTGGACA 59.046 50.000 11.09 0.00 44.29 4.02
212 264 0.110056 CGCAGTGCATCAAACTGGAC 60.110 55.000 16.83 0.00 44.29 4.02
213 265 0.534877 ACGCAGTGCATCAAACTGGA 60.535 50.000 16.83 0.00 44.29 3.86
214 266 0.311790 AACGCAGTGCATCAAACTGG 59.688 50.000 16.83 0.00 45.00 4.00
215 267 1.401530 CAACGCAGTGCATCAAACTG 58.598 50.000 16.83 0.00 45.00 3.16
216 268 0.311790 CCAACGCAGTGCATCAAACT 59.688 50.000 16.83 0.00 45.00 2.66
221 273 0.671781 AGTCTCCAACGCAGTGCATC 60.672 55.000 16.83 0.00 45.00 3.91
228 280 0.606604 GTTAGGGAGTCTCCAACGCA 59.393 55.000 20.72 0.00 38.64 5.24
229 281 0.896226 AGTTAGGGAGTCTCCAACGC 59.104 55.000 20.72 7.77 38.64 4.84
235 287 5.422214 TGAATGGAAAGTTAGGGAGTCTC 57.578 43.478 0.00 0.00 0.00 3.36
239 291 7.775093 TGTTATGATGAATGGAAAGTTAGGGAG 59.225 37.037 0.00 0.00 0.00 4.30
240 292 7.638444 TGTTATGATGAATGGAAAGTTAGGGA 58.362 34.615 0.00 0.00 0.00 4.20
253 305 4.446311 GGGGGTGTAGCTGTTATGATGAAT 60.446 45.833 0.00 0.00 0.00 2.57
340 392 9.643693 AGATTGCAAAATAAGGTTTCAACATAG 57.356 29.630 1.71 0.00 0.00 2.23
343 395 9.995003 AATAGATTGCAAAATAAGGTTTCAACA 57.005 25.926 1.71 0.00 0.00 3.33
395 454 4.087182 TCGACAGAATAGGGACTTGACTT 58.913 43.478 0.00 0.00 41.75 3.01
416 475 2.323959 CTTTCACAGCTCAGACGTCTC 58.676 52.381 16.96 4.68 0.00 3.36
461 520 4.760047 CCCTCGGGACTTGTGGCG 62.760 72.222 0.00 0.00 37.50 5.69
533 593 2.429571 TGAGGCGTACGTCGTTGC 60.430 61.111 17.90 8.52 42.13 4.17
534 594 1.800315 CCTGAGGCGTACGTCGTTG 60.800 63.158 17.90 9.37 42.13 4.10
535 595 2.263741 ACCTGAGGCGTACGTCGTT 61.264 57.895 17.90 0.00 42.13 3.85
537 597 2.191354 TTCACCTGAGGCGTACGTCG 62.191 60.000 17.90 3.89 43.12 5.12
543 606 0.320771 GTGTCATTCACCTGAGGCGT 60.321 55.000 0.00 0.00 40.84 5.68
608 685 4.111016 TGAGGTCTACGCGTGCGG 62.111 66.667 24.59 12.10 44.69 5.69
609 686 2.577112 CTGAGGTCTACGCGTGCG 60.577 66.667 24.59 13.39 46.03 5.34
610 687 2.202623 CCTGAGGTCTACGCGTGC 60.203 66.667 24.59 11.85 0.00 5.34
682 764 2.348660 CCAAAGGAACGCGTATTGGTA 58.651 47.619 25.54 0.00 36.60 3.25
709 801 3.898509 CGGCTCGCCTCTCCTCAG 61.899 72.222 6.35 0.00 0.00 3.35
723 815 4.477975 CCGGTGAGTCGTCTCGGC 62.478 72.222 5.22 1.05 43.09 5.54
724 816 4.477975 GCCGGTGAGTCGTCTCGG 62.478 72.222 1.90 4.75 43.09 4.63
725 817 4.813526 CGCCGGTGAGTCGTCTCG 62.814 72.222 10.20 0.00 43.09 4.04
759 870 1.645034 CACGAGCCACAATACCTCAG 58.355 55.000 0.00 0.00 0.00 3.35
871 1027 3.880490 TGGAGTAGCTTTTCTCGCAAAAA 59.120 39.130 0.00 0.00 0.00 1.94
872 1028 3.472652 TGGAGTAGCTTTTCTCGCAAAA 58.527 40.909 0.00 0.00 0.00 2.44
873 1029 3.120321 TGGAGTAGCTTTTCTCGCAAA 57.880 42.857 0.00 0.00 0.00 3.68
874 1030 2.831685 TGGAGTAGCTTTTCTCGCAA 57.168 45.000 0.00 0.00 0.00 4.85
875 1031 3.334583 AATGGAGTAGCTTTTCTCGCA 57.665 42.857 0.00 0.00 0.00 5.10
876 1032 5.993106 ATAAATGGAGTAGCTTTTCTCGC 57.007 39.130 0.00 0.00 0.00 5.03
877 1033 6.144080 CCGTATAAATGGAGTAGCTTTTCTCG 59.856 42.308 0.00 0.00 33.01 4.04
878 1034 7.208080 TCCGTATAAATGGAGTAGCTTTTCTC 58.792 38.462 0.00 0.00 35.77 2.87
879 1035 7.120923 TCCGTATAAATGGAGTAGCTTTTCT 57.879 36.000 0.00 0.00 35.77 2.52
880 1036 7.494952 AGTTCCGTATAAATGGAGTAGCTTTTC 59.505 37.037 0.00 0.00 41.91 2.29
881 1037 7.336396 AGTTCCGTATAAATGGAGTAGCTTTT 58.664 34.615 0.00 0.00 41.91 2.27
882 1038 6.885922 AGTTCCGTATAAATGGAGTAGCTTT 58.114 36.000 0.00 0.00 41.91 3.51
900 1057 9.122613 GAGTAGTAAGTAACACTTTTAGTTCCG 57.877 37.037 0.00 0.00 39.51 4.30
965 1130 3.766691 GGAGTCGTAAGCCGGCCA 61.767 66.667 26.15 8.93 43.96 5.36
996 1164 3.217599 TCGACTCCGAAACTCATCTTG 57.782 47.619 0.00 0.00 42.51 3.02
1023 1191 2.674380 GGCAGTTGCAGGTCCTGG 60.674 66.667 20.72 4.41 44.36 4.45
1096 1278 7.571026 CACGTACGTACTTACATATAAGCTCT 58.429 38.462 22.34 0.00 41.48 4.09
1097 1279 6.301842 GCACGTACGTACTTACATATAAGCTC 59.698 42.308 22.34 0.00 41.48 4.09
1192 1381 2.048603 GCTTGATGACCACCCTGGC 61.049 63.158 0.00 0.00 42.67 4.85
1197 1389 1.364626 CGCTCTGCTTGATGACCACC 61.365 60.000 0.00 0.00 0.00 4.61
1309 1503 6.619744 TCGACCACGTAGTATTTCATGTTAA 58.380 36.000 0.00 0.00 41.61 2.01
1316 1510 3.861113 TGCATTCGACCACGTAGTATTTC 59.139 43.478 0.00 0.00 41.61 2.17
1318 1512 3.119245 AGTGCATTCGACCACGTAGTATT 60.119 43.478 0.00 0.00 41.61 1.89
1319 1513 2.426024 AGTGCATTCGACCACGTAGTAT 59.574 45.455 0.00 0.00 41.61 2.12
1322 1516 1.390123 CAAGTGCATTCGACCACGTAG 59.610 52.381 0.00 0.00 40.69 3.51
1324 1518 1.841663 GCAAGTGCATTCGACCACGT 61.842 55.000 0.00 0.00 41.59 4.49
1325 1519 1.154413 GCAAGTGCATTCGACCACG 60.154 57.895 0.00 0.00 41.59 4.94
1326 1520 0.593128 AAGCAAGTGCATTCGACCAC 59.407 50.000 6.00 0.00 45.16 4.16
1338 1570 7.912250 GTGCGTACGGTATATATATAAGCAAGT 59.088 37.037 18.39 3.87 0.00 3.16
1342 1574 6.885526 CGTGCGTACGGTATATATATAAGC 57.114 41.667 18.81 0.00 46.23 3.09
1501 1764 4.382320 CCCCGTGTACACCCACCG 62.382 72.222 20.11 8.08 31.47 4.94
1576 1839 4.767255 GAGCAGGTGGGTGAGGCG 62.767 72.222 0.00 0.00 0.00 5.52
1719 1983 7.816031 ACGCAAAAGCTAAACAGTTATAGTAGA 59.184 33.333 0.00 0.00 0.00 2.59
1720 1984 7.898309 CACGCAAAAGCTAAACAGTTATAGTAG 59.102 37.037 0.00 0.00 0.00 2.57
1721 1985 7.622672 GCACGCAAAAGCTAAACAGTTATAGTA 60.623 37.037 0.00 0.00 0.00 1.82
1722 1986 6.599437 CACGCAAAAGCTAAACAGTTATAGT 58.401 36.000 0.00 0.00 0.00 2.12
1831 2158 1.616865 GGATGGACCGGTCGATCATAA 59.383 52.381 41.89 19.74 43.70 1.90
1837 2164 2.131709 GGATGGATGGACCGGTCGA 61.132 63.158 27.68 25.05 42.61 4.20
1844 2171 1.706866 TGGATGGATGGATGGATGGAC 59.293 52.381 0.00 0.00 0.00 4.02
1847 2174 1.835494 GCTGGATGGATGGATGGATG 58.165 55.000 0.00 0.00 0.00 3.51
1848 2175 0.327259 CGCTGGATGGATGGATGGAT 59.673 55.000 0.00 0.00 0.00 3.41
1849 2176 1.756665 CGCTGGATGGATGGATGGA 59.243 57.895 0.00 0.00 0.00 3.41
1850 2177 1.970114 GCGCTGGATGGATGGATGG 60.970 63.158 0.00 0.00 0.00 3.51
1851 2178 0.820482 TTGCGCTGGATGGATGGATG 60.820 55.000 9.73 0.00 0.00 3.51
1852 2179 0.111832 ATTGCGCTGGATGGATGGAT 59.888 50.000 9.73 0.00 0.00 3.41
1853 2180 0.820482 CATTGCGCTGGATGGATGGA 60.820 55.000 9.73 0.00 0.00 3.41
1854 2181 1.105167 ACATTGCGCTGGATGGATGG 61.105 55.000 9.73 0.00 0.00 3.51
1855 2182 0.309922 GACATTGCGCTGGATGGATG 59.690 55.000 9.73 4.25 0.00 3.51
1856 2183 1.162181 CGACATTGCGCTGGATGGAT 61.162 55.000 9.73 0.00 0.00 3.41
1857 2184 1.815003 CGACATTGCGCTGGATGGA 60.815 57.895 9.73 0.00 0.00 3.41
1858 2185 1.368345 TTCGACATTGCGCTGGATGG 61.368 55.000 9.73 0.00 0.00 3.51
1859 2186 0.247814 GTTCGACATTGCGCTGGATG 60.248 55.000 9.73 12.80 0.00 3.51
1860 2187 1.369091 GGTTCGACATTGCGCTGGAT 61.369 55.000 9.73 0.00 0.00 3.41
1861 2188 2.032634 GGTTCGACATTGCGCTGGA 61.033 57.895 9.73 0.00 0.00 3.86
1862 2189 1.851021 TTGGTTCGACATTGCGCTGG 61.851 55.000 9.73 0.00 0.00 4.85
1863 2190 0.725784 GTTGGTTCGACATTGCGCTG 60.726 55.000 9.73 0.99 0.00 5.18
1864 2191 1.574428 GTTGGTTCGACATTGCGCT 59.426 52.632 9.73 0.00 0.00 5.92
1865 2192 1.792057 CGTTGGTTCGACATTGCGC 60.792 57.895 0.00 0.00 0.00 6.09
1866 2193 0.179250 CTCGTTGGTTCGACATTGCG 60.179 55.000 0.00 0.00 35.91 4.85
1867 2194 0.452784 GCTCGTTGGTTCGACATTGC 60.453 55.000 0.00 0.00 35.91 3.56
1868 2195 1.148310 AGCTCGTTGGTTCGACATTG 58.852 50.000 0.00 0.00 35.91 2.82
1869 2196 2.029290 AGTAGCTCGTTGGTTCGACATT 60.029 45.455 0.00 0.00 35.91 2.71
1870 2197 1.544691 AGTAGCTCGTTGGTTCGACAT 59.455 47.619 0.00 0.00 35.91 3.06
1871 2198 0.956633 AGTAGCTCGTTGGTTCGACA 59.043 50.000 0.00 0.00 35.91 4.35
1872 2199 1.335689 ACAGTAGCTCGTTGGTTCGAC 60.336 52.381 0.00 0.00 35.91 4.20
1873 2200 0.956633 ACAGTAGCTCGTTGGTTCGA 59.043 50.000 0.00 0.00 38.19 3.71
1874 2201 1.335597 TGACAGTAGCTCGTTGGTTCG 60.336 52.381 0.00 0.00 0.00 3.95
1875 2202 2.433868 TGACAGTAGCTCGTTGGTTC 57.566 50.000 0.00 0.00 0.00 3.62
1876 2203 2.102588 AGTTGACAGTAGCTCGTTGGTT 59.897 45.455 0.00 0.00 0.00 3.67
1877 2204 1.687123 AGTTGACAGTAGCTCGTTGGT 59.313 47.619 0.00 0.00 0.00 3.67
1878 2205 2.329379 GAGTTGACAGTAGCTCGTTGG 58.671 52.381 0.00 0.00 0.00 3.77
1879 2206 2.329379 GGAGTTGACAGTAGCTCGTTG 58.671 52.381 0.00 0.00 0.00 4.10
1880 2207 1.068472 CGGAGTTGACAGTAGCTCGTT 60.068 52.381 0.00 0.00 0.00 3.85
1881 2208 0.522180 CGGAGTTGACAGTAGCTCGT 59.478 55.000 0.00 0.00 0.00 4.18
1882 2209 0.522180 ACGGAGTTGACAGTAGCTCG 59.478 55.000 0.00 0.00 37.78 5.03
1896 2223 1.204941 CACTAAACTGGGAGGACGGAG 59.795 57.143 0.00 0.00 0.00 4.63
1897 2224 1.203087 TCACTAAACTGGGAGGACGGA 60.203 52.381 0.00 0.00 0.00 4.69
1898 2225 1.263356 TCACTAAACTGGGAGGACGG 58.737 55.000 0.00 0.00 0.00 4.79
1899 2226 2.931320 GCTTCACTAAACTGGGAGGACG 60.931 54.545 0.00 0.00 0.00 4.79
1900 2227 2.038557 TGCTTCACTAAACTGGGAGGAC 59.961 50.000 0.00 0.00 0.00 3.85
1901 2228 2.038557 GTGCTTCACTAAACTGGGAGGA 59.961 50.000 0.00 0.00 0.00 3.71
1902 2229 2.039084 AGTGCTTCACTAAACTGGGAGG 59.961 50.000 0.00 0.00 43.46 4.30
1903 2230 3.409026 AGTGCTTCACTAAACTGGGAG 57.591 47.619 0.00 0.00 43.46 4.30
1904 2231 3.901844 ACTAGTGCTTCACTAAACTGGGA 59.098 43.478 7.91 0.00 44.80 4.37
1905 2232 3.997021 CACTAGTGCTTCACTAAACTGGG 59.003 47.826 10.54 0.00 44.80 4.45
1920 2247 6.238374 CGGGTTATTAATTTCAGGCACTAGTG 60.238 42.308 18.93 18.93 36.02 2.74
1921 2248 5.820947 CGGGTTATTAATTTCAGGCACTAGT 59.179 40.000 0.00 0.00 36.02 2.57
1922 2249 5.238650 CCGGGTTATTAATTTCAGGCACTAG 59.761 44.000 0.00 0.00 36.02 2.57
1923 2250 5.127491 CCGGGTTATTAATTTCAGGCACTA 58.873 41.667 0.00 0.00 36.02 2.74
1924 2251 3.951680 CCGGGTTATTAATTTCAGGCACT 59.048 43.478 0.00 0.00 43.88 4.40
1925 2252 3.697542 ACCGGGTTATTAATTTCAGGCAC 59.302 43.478 6.32 0.00 0.00 5.01
1926 2253 3.970842 ACCGGGTTATTAATTTCAGGCA 58.029 40.909 6.32 0.00 0.00 4.75
1927 2254 4.994907 AACCGGGTTATTAATTTCAGGC 57.005 40.909 11.50 0.00 0.00 4.85
1928 2255 5.105513 AGCAAACCGGGTTATTAATTTCAGG 60.106 40.000 13.79 0.00 0.00 3.86
1929 2256 5.804979 CAGCAAACCGGGTTATTAATTTCAG 59.195 40.000 13.79 0.00 0.00 3.02
1930 2257 5.715070 CAGCAAACCGGGTTATTAATTTCA 58.285 37.500 13.79 0.00 0.00 2.69
1931 2258 4.565166 GCAGCAAACCGGGTTATTAATTTC 59.435 41.667 13.79 0.00 0.00 2.17
1932 2259 4.021016 TGCAGCAAACCGGGTTATTAATTT 60.021 37.500 13.79 0.00 0.00 1.82
1933 2260 3.511934 TGCAGCAAACCGGGTTATTAATT 59.488 39.130 13.79 0.00 0.00 1.40
1934 2261 3.093057 TGCAGCAAACCGGGTTATTAAT 58.907 40.909 13.79 0.00 0.00 1.40
1935 2262 2.515854 TGCAGCAAACCGGGTTATTAA 58.484 42.857 13.79 0.00 0.00 1.40
1936 2263 2.201921 TGCAGCAAACCGGGTTATTA 57.798 45.000 13.79 0.00 0.00 0.98
1937 2264 1.204467 CATGCAGCAAACCGGGTTATT 59.796 47.619 13.79 0.00 0.00 1.40
1938 2265 0.817013 CATGCAGCAAACCGGGTTAT 59.183 50.000 13.79 0.00 0.00 1.89
1939 2266 0.538516 ACATGCAGCAAACCGGGTTA 60.539 50.000 13.79 0.00 0.00 2.85
1940 2267 1.832167 ACATGCAGCAAACCGGGTT 60.832 52.632 6.59 6.59 0.00 4.11
1941 2268 2.203480 ACATGCAGCAAACCGGGT 60.203 55.556 6.32 0.00 0.00 5.28
1942 2269 2.259204 CACATGCAGCAAACCGGG 59.741 61.111 6.32 0.00 0.00 5.73
1943 2270 2.259204 CCACATGCAGCAAACCGG 59.741 61.111 0.00 0.00 0.00 5.28
1944 2271 2.431260 GCCACATGCAGCAAACCG 60.431 61.111 0.00 0.00 40.77 4.44
1945 2272 2.431260 CGCCACATGCAGCAAACC 60.431 61.111 0.00 0.00 41.33 3.27
1946 2273 1.443194 CTCGCCACATGCAGCAAAC 60.443 57.895 0.00 0.00 41.33 2.93
1947 2274 0.605050 TACTCGCCACATGCAGCAAA 60.605 50.000 0.00 0.00 41.33 3.68
1948 2275 1.003959 TACTCGCCACATGCAGCAA 60.004 52.632 0.00 0.00 41.33 3.91
1949 2276 1.448365 CTACTCGCCACATGCAGCA 60.448 57.895 0.00 0.00 41.33 4.41
1950 2277 2.817423 GCTACTCGCCACATGCAGC 61.817 63.158 0.00 0.00 41.33 5.25
1951 2278 0.742281 AAGCTACTCGCCACATGCAG 60.742 55.000 0.00 0.00 41.33 4.41
1952 2279 1.020861 CAAGCTACTCGCCACATGCA 61.021 55.000 0.00 0.00 41.33 3.96
1953 2280 1.021390 ACAAGCTACTCGCCACATGC 61.021 55.000 0.00 0.00 40.39 4.06
1954 2281 2.196749 CTACAAGCTACTCGCCACATG 58.803 52.381 0.00 0.00 40.39 3.21
1955 2282 1.825474 ACTACAAGCTACTCGCCACAT 59.175 47.619 0.00 0.00 40.39 3.21
1956 2283 1.254026 ACTACAAGCTACTCGCCACA 58.746 50.000 0.00 0.00 40.39 4.17
1957 2284 3.181489 ACATACTACAAGCTACTCGCCAC 60.181 47.826 0.00 0.00 40.39 5.01
1958 2285 3.021695 ACATACTACAAGCTACTCGCCA 58.978 45.455 0.00 0.00 40.39 5.69
1959 2286 3.372954 CACATACTACAAGCTACTCGCC 58.627 50.000 0.00 0.00 40.39 5.54
1960 2287 2.789893 GCACATACTACAAGCTACTCGC 59.210 50.000 0.00 0.00 39.57 5.03
1961 2288 3.036633 CGCACATACTACAAGCTACTCG 58.963 50.000 0.00 0.00 0.00 4.18
1962 2289 4.288670 TCGCACATACTACAAGCTACTC 57.711 45.455 0.00 0.00 0.00 2.59
1963 2290 4.098044 ACATCGCACATACTACAAGCTACT 59.902 41.667 0.00 0.00 0.00 2.57
1964 2291 4.207224 CACATCGCACATACTACAAGCTAC 59.793 45.833 0.00 0.00 0.00 3.58
1965 2292 4.359706 CACATCGCACATACTACAAGCTA 58.640 43.478 0.00 0.00 0.00 3.32
1966 2293 3.190079 CACATCGCACATACTACAAGCT 58.810 45.455 0.00 0.00 0.00 3.74
1967 2294 2.285220 CCACATCGCACATACTACAAGC 59.715 50.000 0.00 0.00 0.00 4.01
1968 2295 2.285220 GCCACATCGCACATACTACAAG 59.715 50.000 0.00 0.00 0.00 3.16
1969 2296 2.276201 GCCACATCGCACATACTACAA 58.724 47.619 0.00 0.00 0.00 2.41
1970 2297 1.205893 TGCCACATCGCACATACTACA 59.794 47.619 0.00 0.00 32.62 2.74
1971 2298 1.934589 TGCCACATCGCACATACTAC 58.065 50.000 0.00 0.00 32.62 2.73
1972 2299 2.871633 CAATGCCACATCGCACATACTA 59.128 45.455 0.00 0.00 42.70 1.82
1973 2300 1.672363 CAATGCCACATCGCACATACT 59.328 47.619 0.00 0.00 42.70 2.12
1974 2301 1.401552 ACAATGCCACATCGCACATAC 59.598 47.619 0.00 0.00 42.70 2.39
1975 2302 1.670295 GACAATGCCACATCGCACATA 59.330 47.619 0.00 0.00 42.70 2.29
1976 2303 0.452987 GACAATGCCACATCGCACAT 59.547 50.000 0.00 0.00 42.70 3.21
1977 2304 0.606130 AGACAATGCCACATCGCACA 60.606 50.000 0.00 0.00 42.70 4.57
1978 2305 0.179181 CAGACAATGCCACATCGCAC 60.179 55.000 0.00 0.00 42.70 5.34
1979 2306 0.606130 ACAGACAATGCCACATCGCA 60.606 50.000 0.00 0.00 44.35 5.10
1980 2307 1.368641 TACAGACAATGCCACATCGC 58.631 50.000 0.00 0.00 0.00 4.58
1981 2308 3.943958 CATTACAGACAATGCCACATCG 58.056 45.455 0.00 0.00 0.00 3.84
1989 2316 5.530519 AGTTACACGCATTACAGACAATG 57.469 39.130 0.00 0.00 38.65 2.82
1990 2317 7.661127 TTAAGTTACACGCATTACAGACAAT 57.339 32.000 0.00 0.00 0.00 2.71
1991 2318 7.661127 ATTAAGTTACACGCATTACAGACAA 57.339 32.000 0.00 0.00 0.00 3.18
1992 2319 7.661127 AATTAAGTTACACGCATTACAGACA 57.339 32.000 0.00 0.00 0.00 3.41
1993 2320 9.632969 CATAATTAAGTTACACGCATTACAGAC 57.367 33.333 0.00 0.00 0.00 3.51
1994 2321 9.373603 ACATAATTAAGTTACACGCATTACAGA 57.626 29.630 0.00 0.00 0.00 3.41
1995 2322 9.420966 CACATAATTAAGTTACACGCATTACAG 57.579 33.333 0.00 0.00 0.00 2.74
1996 2323 8.937884 ACACATAATTAAGTTACACGCATTACA 58.062 29.630 0.00 0.00 0.00 2.41
1997 2324 9.763465 AACACATAATTAAGTTACACGCATTAC 57.237 29.630 0.00 0.00 0.00 1.89
1998 2325 9.762062 CAACACATAATTAAGTTACACGCATTA 57.238 29.630 0.00 0.00 0.00 1.90
1999 2326 8.293867 ACAACACATAATTAAGTTACACGCATT 58.706 29.630 0.00 0.00 0.00 3.56
2000 2327 7.812648 ACAACACATAATTAAGTTACACGCAT 58.187 30.769 0.00 0.00 0.00 4.73
2001 2328 7.192148 ACAACACATAATTAAGTTACACGCA 57.808 32.000 0.00 0.00 0.00 5.24
2002 2329 9.257865 CTAACAACACATAATTAAGTTACACGC 57.742 33.333 0.00 0.00 0.00 5.34
2015 2342 9.634163 CATGAGTACTACACTAACAACACATAA 57.366 33.333 0.00 0.00 37.72 1.90
2016 2343 9.016438 TCATGAGTACTACACTAACAACACATA 57.984 33.333 0.00 0.00 37.72 2.29
2017 2344 7.892609 TCATGAGTACTACACTAACAACACAT 58.107 34.615 0.00 0.00 37.72 3.21
2018 2345 7.279750 TCATGAGTACTACACTAACAACACA 57.720 36.000 0.00 0.00 37.72 3.72
2019 2346 8.027189 TCATCATGAGTACTACACTAACAACAC 58.973 37.037 0.09 0.00 37.72 3.32
2020 2347 8.117813 TCATCATGAGTACTACACTAACAACA 57.882 34.615 0.09 0.00 37.72 3.33
2021 2348 8.459635 TCTCATCATGAGTACTACACTAACAAC 58.540 37.037 14.56 0.00 44.58 3.32
2022 2349 8.575649 TCTCATCATGAGTACTACACTAACAA 57.424 34.615 14.56 0.00 44.58 2.83
2023 2350 8.459635 GTTCTCATCATGAGTACTACACTAACA 58.540 37.037 14.56 0.00 44.58 2.41
2024 2351 7.640630 CGTTCTCATCATGAGTACTACACTAAC 59.359 40.741 19.03 10.24 44.58 2.34
2025 2352 7.678927 GCGTTCTCATCATGAGTACTACACTAA 60.679 40.741 19.03 0.15 44.58 2.24
2026 2353 6.238402 GCGTTCTCATCATGAGTACTACACTA 60.238 42.308 19.03 0.00 44.58 2.74
2027 2354 5.449314 GCGTTCTCATCATGAGTACTACACT 60.449 44.000 19.03 0.00 44.58 3.55
2028 2355 4.735822 GCGTTCTCATCATGAGTACTACAC 59.264 45.833 19.03 5.67 44.58 2.90
2029 2356 4.398044 TGCGTTCTCATCATGAGTACTACA 59.602 41.667 19.03 14.72 44.58 2.74
2030 2357 4.921547 TGCGTTCTCATCATGAGTACTAC 58.078 43.478 19.03 12.78 44.58 2.73
2031 2358 4.640647 ACTGCGTTCTCATCATGAGTACTA 59.359 41.667 19.03 9.44 44.58 1.82
2032 2359 3.445450 ACTGCGTTCTCATCATGAGTACT 59.555 43.478 19.03 0.00 44.58 2.73
2033 2360 3.775202 ACTGCGTTCTCATCATGAGTAC 58.225 45.455 14.56 13.80 44.58 2.73
2034 2361 4.424626 GAACTGCGTTCTCATCATGAGTA 58.575 43.478 14.56 1.79 44.58 2.59
2035 2362 3.257393 GAACTGCGTTCTCATCATGAGT 58.743 45.455 14.56 0.00 44.58 3.41
2036 2363 2.606725 GGAACTGCGTTCTCATCATGAG 59.393 50.000 8.54 8.54 45.59 2.90
2037 2364 2.234661 AGGAACTGCGTTCTCATCATGA 59.765 45.455 16.93 0.00 41.70 3.07
2038 2365 2.625737 AGGAACTGCGTTCTCATCATG 58.374 47.619 16.93 0.00 41.70 3.07
2039 2366 3.340814 AAGGAACTGCGTTCTCATCAT 57.659 42.857 16.93 0.00 41.70 2.45
2040 2367 2.839486 AAGGAACTGCGTTCTCATCA 57.161 45.000 16.93 0.00 41.70 3.07
2041 2368 3.498397 TGAAAAGGAACTGCGTTCTCATC 59.502 43.478 16.93 12.12 41.70 2.92
2042 2369 3.476552 TGAAAAGGAACTGCGTTCTCAT 58.523 40.909 16.93 5.47 41.70 2.90
2043 2370 2.912771 TGAAAAGGAACTGCGTTCTCA 58.087 42.857 16.93 11.65 41.70 3.27
2044 2371 3.251004 ACATGAAAAGGAACTGCGTTCTC 59.749 43.478 16.93 9.83 41.70 2.87
2045 2372 3.214328 ACATGAAAAGGAACTGCGTTCT 58.786 40.909 16.93 2.35 41.70 3.01
2046 2373 3.626028 ACATGAAAAGGAACTGCGTTC 57.374 42.857 0.00 11.42 40.86 3.95
2047 2374 3.243401 GGAACATGAAAAGGAACTGCGTT 60.243 43.478 0.00 0.00 40.86 4.84
2048 2375 2.293399 GGAACATGAAAAGGAACTGCGT 59.707 45.455 0.00 0.00 40.86 5.24
2049 2376 2.351738 GGGAACATGAAAAGGAACTGCG 60.352 50.000 0.00 0.00 40.86 5.18
2050 2377 2.893489 AGGGAACATGAAAAGGAACTGC 59.107 45.455 0.00 0.00 40.86 4.40
2051 2378 3.305608 GCAGGGAACATGAAAAGGAACTG 60.306 47.826 0.00 0.00 40.86 3.16
2053 2380 2.029020 GGCAGGGAACATGAAAAGGAAC 60.029 50.000 0.00 0.00 0.00 3.62
2054 2381 2.247358 GGCAGGGAACATGAAAAGGAA 58.753 47.619 0.00 0.00 0.00 3.36
2055 2382 1.146774 TGGCAGGGAACATGAAAAGGA 59.853 47.619 0.00 0.00 0.00 3.36
2056 2383 1.273327 GTGGCAGGGAACATGAAAAGG 59.727 52.381 0.00 0.00 0.00 3.11
2057 2384 1.068333 CGTGGCAGGGAACATGAAAAG 60.068 52.381 0.00 0.00 0.00 2.27
2058 2385 0.958091 CGTGGCAGGGAACATGAAAA 59.042 50.000 0.00 0.00 0.00 2.29
2059 2386 0.893270 CCGTGGCAGGGAACATGAAA 60.893 55.000 21.34 0.00 0.00 2.69
2060 2387 1.303236 CCGTGGCAGGGAACATGAA 60.303 57.895 21.34 0.00 0.00 2.57
2061 2388 2.220586 TCCGTGGCAGGGAACATGA 61.221 57.895 25.57 2.57 0.00 3.07
2062 2389 2.040544 GTCCGTGGCAGGGAACATG 61.041 63.158 28.84 1.51 33.45 3.21
2063 2390 2.351276 GTCCGTGGCAGGGAACAT 59.649 61.111 28.84 0.00 33.45 2.71
2064 2391 3.164977 TGTCCGTGGCAGGGAACA 61.165 61.111 28.84 23.70 33.45 3.18
2065 2392 2.358737 CTGTCCGTGGCAGGGAAC 60.359 66.667 28.84 21.71 33.45 3.62
2066 2393 2.847234 ACTGTCCGTGGCAGGGAA 60.847 61.111 28.84 17.78 38.22 3.97
2067 2394 3.311110 GACTGTCCGTGGCAGGGA 61.311 66.667 24.17 24.17 38.22 4.20
2068 2395 4.394712 GGACTGTCCGTGGCAGGG 62.395 72.222 19.96 19.96 38.22 4.45
2069 2396 3.314331 AGGACTGTCCGTGGCAGG 61.314 66.667 20.49 0.00 42.75 4.85
2070 2397 2.047844 CAGGACTGTCCGTGGCAG 60.048 66.667 20.49 4.26 42.75 4.85
2071 2398 1.978455 AAACAGGACTGTCCGTGGCA 61.978 55.000 20.49 0.00 44.13 4.92
2072 2399 0.034337 TAAACAGGACTGTCCGTGGC 59.966 55.000 20.49 0.00 44.13 5.01
2073 2400 1.337823 CCTAAACAGGACTGTCCGTGG 60.338 57.143 20.49 16.01 44.13 4.94
2074 2401 1.343465 ACCTAAACAGGACTGTCCGTG 59.657 52.381 20.49 19.37 44.13 4.94
2075 2402 1.713297 ACCTAAACAGGACTGTCCGT 58.287 50.000 20.49 17.59 44.13 4.69
2076 2403 2.833631 AACCTAAACAGGACTGTCCG 57.166 50.000 20.49 16.99 44.13 4.79
2077 2404 4.065789 CAGAAACCTAAACAGGACTGTCC 58.934 47.826 19.20 19.20 44.13 4.02
2078 2405 4.957296 TCAGAAACCTAAACAGGACTGTC 58.043 43.478 5.30 0.00 44.13 3.51
2080 2407 8.454106 CAATAATCAGAAACCTAAACAGGACTG 58.546 37.037 0.00 0.00 33.52 3.51
2081 2408 7.611855 CCAATAATCAGAAACCTAAACAGGACT 59.388 37.037 0.00 0.00 0.00 3.85
2082 2409 7.610305 TCCAATAATCAGAAACCTAAACAGGAC 59.390 37.037 0.00 0.00 0.00 3.85
2083 2410 7.610305 GTCCAATAATCAGAAACCTAAACAGGA 59.390 37.037 0.00 0.00 0.00 3.86
2084 2411 7.393234 TGTCCAATAATCAGAAACCTAAACAGG 59.607 37.037 0.00 0.00 0.00 4.00
2085 2412 8.335532 TGTCCAATAATCAGAAACCTAAACAG 57.664 34.615 0.00 0.00 0.00 3.16
2086 2413 8.698973 TTGTCCAATAATCAGAAACCTAAACA 57.301 30.769 0.00 0.00 0.00 2.83
2087 2414 8.244113 CCTTGTCCAATAATCAGAAACCTAAAC 58.756 37.037 0.00 0.00 0.00 2.01
2088 2415 8.167392 TCCTTGTCCAATAATCAGAAACCTAAA 58.833 33.333 0.00 0.00 0.00 1.85
2089 2416 7.695055 TCCTTGTCCAATAATCAGAAACCTAA 58.305 34.615 0.00 0.00 0.00 2.69
2090 2417 7.265599 TCCTTGTCCAATAATCAGAAACCTA 57.734 36.000 0.00 0.00 0.00 3.08
2091 2418 6.139679 TCCTTGTCCAATAATCAGAAACCT 57.860 37.500 0.00 0.00 0.00 3.50
2092 2419 5.358160 CCTCCTTGTCCAATAATCAGAAACC 59.642 44.000 0.00 0.00 0.00 3.27
2093 2420 5.946377 ACCTCCTTGTCCAATAATCAGAAAC 59.054 40.000 0.00 0.00 0.00 2.78
2094 2421 5.945784 CACCTCCTTGTCCAATAATCAGAAA 59.054 40.000 0.00 0.00 0.00 2.52
2095 2422 5.500234 CACCTCCTTGTCCAATAATCAGAA 58.500 41.667 0.00 0.00 0.00 3.02
2096 2423 4.626287 GCACCTCCTTGTCCAATAATCAGA 60.626 45.833 0.00 0.00 0.00 3.27
2097 2424 3.629398 GCACCTCCTTGTCCAATAATCAG 59.371 47.826 0.00 0.00 0.00 2.90
2098 2425 3.010027 TGCACCTCCTTGTCCAATAATCA 59.990 43.478 0.00 0.00 0.00 2.57
2099 2426 3.620488 TGCACCTCCTTGTCCAATAATC 58.380 45.455 0.00 0.00 0.00 1.75
2100 2427 3.737559 TGCACCTCCTTGTCCAATAAT 57.262 42.857 0.00 0.00 0.00 1.28
2101 2428 3.010027 TCATGCACCTCCTTGTCCAATAA 59.990 43.478 0.00 0.00 0.00 1.40
2102 2429 2.575735 TCATGCACCTCCTTGTCCAATA 59.424 45.455 0.00 0.00 0.00 1.90
2103 2430 1.355381 TCATGCACCTCCTTGTCCAAT 59.645 47.619 0.00 0.00 0.00 3.16
2104 2431 0.770499 TCATGCACCTCCTTGTCCAA 59.230 50.000 0.00 0.00 0.00 3.53
2105 2432 0.994247 ATCATGCACCTCCTTGTCCA 59.006 50.000 0.00 0.00 0.00 4.02
2106 2433 1.747355 CAATCATGCACCTCCTTGTCC 59.253 52.381 0.00 0.00 0.00 4.02
2107 2434 2.440409 ACAATCATGCACCTCCTTGTC 58.560 47.619 0.00 0.00 0.00 3.18
2108 2435 2.592102 ACAATCATGCACCTCCTTGT 57.408 45.000 0.00 0.00 0.00 3.16
2109 2436 3.087031 AGAACAATCATGCACCTCCTTG 58.913 45.455 0.00 0.00 0.00 3.61
2110 2437 3.446442 AGAACAATCATGCACCTCCTT 57.554 42.857 0.00 0.00 0.00 3.36
2111 2438 3.087031 CAAGAACAATCATGCACCTCCT 58.913 45.455 0.00 0.00 0.00 3.69
2112 2439 2.821969 ACAAGAACAATCATGCACCTCC 59.178 45.455 0.00 0.00 0.00 4.30
2113 2440 3.425359 CGACAAGAACAATCATGCACCTC 60.425 47.826 0.00 0.00 0.00 3.85
2114 2441 2.485426 CGACAAGAACAATCATGCACCT 59.515 45.455 0.00 0.00 0.00 4.00
2115 2442 2.483877 TCGACAAGAACAATCATGCACC 59.516 45.455 0.00 0.00 0.00 5.01
2116 2443 3.811722 TCGACAAGAACAATCATGCAC 57.188 42.857 0.00 0.00 0.00 4.57
2117 2444 6.682423 ATAATCGACAAGAACAATCATGCA 57.318 33.333 0.00 0.00 0.00 3.96
2118 2445 7.587757 GGTAATAATCGACAAGAACAATCATGC 59.412 37.037 0.00 0.00 0.00 4.06
2119 2446 8.070171 GGGTAATAATCGACAAGAACAATCATG 58.930 37.037 0.00 0.00 0.00 3.07
2120 2447 7.042051 CGGGTAATAATCGACAAGAACAATCAT 60.042 37.037 0.00 0.00 0.00 2.45
2121 2448 6.256975 CGGGTAATAATCGACAAGAACAATCA 59.743 38.462 0.00 0.00 0.00 2.57
2122 2449 6.257193 ACGGGTAATAATCGACAAGAACAATC 59.743 38.462 0.00 0.00 0.00 2.67
2123 2450 6.110707 ACGGGTAATAATCGACAAGAACAAT 58.889 36.000 0.00 0.00 0.00 2.71
2124 2451 5.481105 ACGGGTAATAATCGACAAGAACAA 58.519 37.500 0.00 0.00 0.00 2.83
2125 2452 5.075858 ACGGGTAATAATCGACAAGAACA 57.924 39.130 0.00 0.00 0.00 3.18
2126 2453 5.346522 AGACGGGTAATAATCGACAAGAAC 58.653 41.667 0.00 0.00 0.00 3.01
2127 2454 5.125900 TGAGACGGGTAATAATCGACAAGAA 59.874 40.000 0.00 0.00 0.00 2.52
2128 2455 4.641541 TGAGACGGGTAATAATCGACAAGA 59.358 41.667 0.00 0.00 0.00 3.02
2129 2456 4.738740 GTGAGACGGGTAATAATCGACAAG 59.261 45.833 0.00 0.00 0.00 3.16
2130 2457 4.440525 GGTGAGACGGGTAATAATCGACAA 60.441 45.833 0.00 0.00 0.00 3.18
2131 2458 3.067180 GGTGAGACGGGTAATAATCGACA 59.933 47.826 0.00 0.00 0.00 4.35
2132 2459 3.067180 TGGTGAGACGGGTAATAATCGAC 59.933 47.826 0.00 0.00 0.00 4.20
2133 2460 3.289836 TGGTGAGACGGGTAATAATCGA 58.710 45.455 0.00 0.00 0.00 3.59
2134 2461 3.720949 TGGTGAGACGGGTAATAATCG 57.279 47.619 0.00 0.00 0.00 3.34
2135 2462 6.937436 ATTTTGGTGAGACGGGTAATAATC 57.063 37.500 0.00 0.00 0.00 1.75
2137 2464 9.550406 CTTATATTTTGGTGAGACGGGTAATAA 57.450 33.333 0.00 0.00 0.00 1.40
2138 2465 8.926374 TCTTATATTTTGGTGAGACGGGTAATA 58.074 33.333 0.00 0.00 0.00 0.98
2139 2466 7.798071 TCTTATATTTTGGTGAGACGGGTAAT 58.202 34.615 0.00 0.00 0.00 1.89
2140 2467 7.185318 TCTTATATTTTGGTGAGACGGGTAA 57.815 36.000 0.00 0.00 0.00 2.85
2141 2468 6.795144 TCTTATATTTTGGTGAGACGGGTA 57.205 37.500 0.00 0.00 0.00 3.69
2142 2469 5.687166 TCTTATATTTTGGTGAGACGGGT 57.313 39.130 0.00 0.00 0.00 5.28
2143 2470 6.113411 ACTTCTTATATTTTGGTGAGACGGG 58.887 40.000 0.00 0.00 0.00 5.28
2144 2471 7.611213 AACTTCTTATATTTTGGTGAGACGG 57.389 36.000 0.00 0.00 0.00 4.79
2145 2472 9.893305 AAAAACTTCTTATATTTTGGTGAGACG 57.107 29.630 0.00 0.00 0.00 4.18
2147 2474 9.691362 GCAAAAACTTCTTATATTTTGGTGAGA 57.309 29.630 10.66 0.00 41.02 3.27
2148 2475 9.474920 TGCAAAAACTTCTTATATTTTGGTGAG 57.525 29.630 10.66 0.00 41.02 3.51
2149 2476 9.474920 CTGCAAAAACTTCTTATATTTTGGTGA 57.525 29.630 10.66 0.00 41.02 4.02
2150 2477 9.260002 ACTGCAAAAACTTCTTATATTTTGGTG 57.740 29.630 10.66 0.00 41.02 4.17
2151 2478 9.830975 AACTGCAAAAACTTCTTATATTTTGGT 57.169 25.926 10.66 0.81 41.02 3.67
2159 2486 9.382275 ACAAATTGAACTGCAAAAACTTCTTAT 57.618 25.926 0.00 0.00 40.48 1.73
2160 2487 8.770438 ACAAATTGAACTGCAAAAACTTCTTA 57.230 26.923 0.00 0.00 40.48 2.10
2161 2488 7.603784 AGACAAATTGAACTGCAAAAACTTCTT 59.396 29.630 0.00 0.00 40.48 2.52
2162 2489 7.099120 AGACAAATTGAACTGCAAAAACTTCT 58.901 30.769 0.00 0.00 40.48 2.85
2163 2490 7.294676 AGACAAATTGAACTGCAAAAACTTC 57.705 32.000 0.00 0.00 40.48 3.01
2164 2491 7.671495 AAGACAAATTGAACTGCAAAAACTT 57.329 28.000 0.00 0.00 40.48 2.66
2165 2492 8.947055 ATAAGACAAATTGAACTGCAAAAACT 57.053 26.923 0.00 0.00 40.48 2.66
2171 2498 9.421806 CCAAAATATAAGACAAATTGAACTGCA 57.578 29.630 0.00 0.00 0.00 4.41
2172 2499 8.872845 CCCAAAATATAAGACAAATTGAACTGC 58.127 33.333 0.00 0.00 0.00 4.40
2175 2502 9.366216 GGTCCCAAAATATAAGACAAATTGAAC 57.634 33.333 0.00 0.00 0.00 3.18
2176 2503 8.247562 CGGTCCCAAAATATAAGACAAATTGAA 58.752 33.333 0.00 0.00 0.00 2.69
2177 2504 7.612244 TCGGTCCCAAAATATAAGACAAATTGA 59.388 33.333 0.00 0.00 0.00 2.57
2178 2505 7.767261 TCGGTCCCAAAATATAAGACAAATTG 58.233 34.615 0.00 0.00 0.00 2.32
2179 2506 7.068226 CCTCGGTCCCAAAATATAAGACAAATT 59.932 37.037 0.00 0.00 0.00 1.82
2180 2507 6.546034 CCTCGGTCCCAAAATATAAGACAAAT 59.454 38.462 0.00 0.00 0.00 2.32
2181 2508 5.883673 CCTCGGTCCCAAAATATAAGACAAA 59.116 40.000 0.00 0.00 0.00 2.83
2182 2509 5.045432 ACCTCGGTCCCAAAATATAAGACAA 60.045 40.000 0.00 0.00 0.00 3.18
2183 2510 4.472108 ACCTCGGTCCCAAAATATAAGACA 59.528 41.667 0.00 0.00 0.00 3.41
2184 2511 5.032327 ACCTCGGTCCCAAAATATAAGAC 57.968 43.478 0.00 0.00 0.00 3.01
2185 2512 6.138263 TCTACCTCGGTCCCAAAATATAAGA 58.862 40.000 0.00 0.00 0.00 2.10
2186 2513 6.415206 TCTACCTCGGTCCCAAAATATAAG 57.585 41.667 0.00 0.00 0.00 1.73
2187 2514 5.306160 CCTCTACCTCGGTCCCAAAATATAA 59.694 44.000 0.00 0.00 0.00 0.98
2188 2515 4.836736 CCTCTACCTCGGTCCCAAAATATA 59.163 45.833 0.00 0.00 0.00 0.86
2189 2516 3.646637 CCTCTACCTCGGTCCCAAAATAT 59.353 47.826 0.00 0.00 0.00 1.28
2190 2517 3.036091 CCTCTACCTCGGTCCCAAAATA 58.964 50.000 0.00 0.00 0.00 1.40
2191 2518 1.838077 CCTCTACCTCGGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
2192 2519 1.203212 TCCTCTACCTCGGTCCCAAAA 60.203 52.381 0.00 0.00 0.00 2.44
2193 2520 0.410663 TCCTCTACCTCGGTCCCAAA 59.589 55.000 0.00 0.00 0.00 3.28
2194 2521 0.324091 GTCCTCTACCTCGGTCCCAA 60.324 60.000 0.00 0.00 0.00 4.12
2195 2522 1.305623 GTCCTCTACCTCGGTCCCA 59.694 63.158 0.00 0.00 0.00 4.37
2196 2523 1.036481 GTGTCCTCTACCTCGGTCCC 61.036 65.000 0.00 0.00 0.00 4.46
2197 2524 1.036481 GGTGTCCTCTACCTCGGTCC 61.036 65.000 0.00 0.00 35.30 4.46
2198 2525 0.323178 TGGTGTCCTCTACCTCGGTC 60.323 60.000 0.00 0.00 39.01 4.79
2199 2526 0.113776 TTGGTGTCCTCTACCTCGGT 59.886 55.000 0.00 0.00 39.01 4.69
2200 2527 1.263356 TTTGGTGTCCTCTACCTCGG 58.737 55.000 0.00 0.00 39.01 4.63
2201 2528 3.611766 ATTTTGGTGTCCTCTACCTCG 57.388 47.619 0.00 0.00 39.01 4.63
2202 2529 7.927092 GTCTTATATTTTGGTGTCCTCTACCTC 59.073 40.741 0.00 0.00 39.01 3.85
2203 2530 7.417570 CGTCTTATATTTTGGTGTCCTCTACCT 60.418 40.741 0.00 0.00 39.01 3.08
2204 2531 6.700520 CGTCTTATATTTTGGTGTCCTCTACC 59.299 42.308 0.00 0.00 38.71 3.18
2205 2532 7.222224 CACGTCTTATATTTTGGTGTCCTCTAC 59.778 40.741 0.00 0.00 0.00 2.59
2206 2533 7.093640 ACACGTCTTATATTTTGGTGTCCTCTA 60.094 37.037 0.00 0.00 32.15 2.43
2207 2534 6.106673 CACGTCTTATATTTTGGTGTCCTCT 58.893 40.000 0.00 0.00 0.00 3.69
2208 2535 5.873164 ACACGTCTTATATTTTGGTGTCCTC 59.127 40.000 0.00 0.00 32.15 3.71
2209 2536 5.801380 ACACGTCTTATATTTTGGTGTCCT 58.199 37.500 0.00 0.00 32.15 3.85
2210 2537 6.072893 ACAACACGTCTTATATTTTGGTGTCC 60.073 38.462 0.00 0.00 36.25 4.02
2211 2538 6.894828 ACAACACGTCTTATATTTTGGTGTC 58.105 36.000 0.00 0.00 36.25 3.67
2212 2539 6.483974 TGACAACACGTCTTATATTTTGGTGT 59.516 34.615 0.00 0.00 45.60 4.16
2213 2540 6.795114 GTGACAACACGTCTTATATTTTGGTG 59.205 38.462 0.00 0.00 45.60 4.17
2214 2541 6.894828 GTGACAACACGTCTTATATTTTGGT 58.105 36.000 0.00 0.00 45.60 3.67
2229 2556 3.537580 TGAACTAGGGTTGTGACAACAC 58.462 45.455 27.37 25.04 46.09 3.32
2230 2557 3.199071 ACTGAACTAGGGTTGTGACAACA 59.801 43.478 27.37 8.61 35.58 3.33
2231 2558 3.805207 ACTGAACTAGGGTTGTGACAAC 58.195 45.455 19.59 19.59 35.58 3.32
2240 2567 4.949856 CCAAATGCATTACTGAACTAGGGT 59.050 41.667 13.39 0.00 0.00 4.34
2258 2586 4.937015 GCAACATGCAAATCTAACCCAAAT 59.063 37.500 0.00 0.00 44.26 2.32
2260 2588 3.924144 GCAACATGCAAATCTAACCCAA 58.076 40.909 0.00 0.00 44.26 4.12
2261 2589 3.591196 GCAACATGCAAATCTAACCCA 57.409 42.857 0.00 0.00 44.26 4.51
2369 2699 3.457749 AGGGCATTTTGGGTTCTTTGAAA 59.542 39.130 0.00 0.00 0.00 2.69
2420 2750 3.703556 TCATTCTTGGCAGTGGTTTTTCA 59.296 39.130 0.00 0.00 0.00 2.69
2421 2751 4.320608 TCATTCTTGGCAGTGGTTTTTC 57.679 40.909 0.00 0.00 0.00 2.29
2422 2752 4.344679 TCATCATTCTTGGCAGTGGTTTTT 59.655 37.500 0.00 0.00 0.00 1.94
2429 2759 2.502142 TGCTCATCATTCTTGGCAGT 57.498 45.000 0.00 0.00 0.00 4.40
2437 2767 5.010314 TGGCCAAGAAATATGCTCATCATTC 59.990 40.000 0.61 0.00 36.63 2.67
2488 2818 7.336679 GCATTTAAAAGCCCCAATTCAAATACT 59.663 33.333 4.05 0.00 0.00 2.12
2527 2858 9.241919 TCAGAATTATTGGAGCTGTTGAAAATA 57.758 29.630 0.00 0.00 0.00 1.40
2528 2859 8.125978 TCAGAATTATTGGAGCTGTTGAAAAT 57.874 30.769 0.00 0.00 0.00 1.82
2529 2860 7.523293 TCAGAATTATTGGAGCTGTTGAAAA 57.477 32.000 0.00 0.00 0.00 2.29
2674 3006 7.638444 TCTTCTCTCTCTCTCTCTCCAAATTA 58.362 38.462 0.00 0.00 0.00 1.40
2679 3012 5.014123 AGTTTCTTCTCTCTCTCTCTCTCCA 59.986 44.000 0.00 0.00 0.00 3.86
2681 3014 7.065923 GGTAAGTTTCTTCTCTCTCTCTCTCTC 59.934 44.444 0.00 0.00 0.00 3.20
2699 3032 4.062991 CAGTAACAAGCCGAGGTAAGTTT 58.937 43.478 0.00 0.00 0.00 2.66
2700 3033 3.070590 ACAGTAACAAGCCGAGGTAAGTT 59.929 43.478 0.00 0.00 0.00 2.66
2709 3042 0.721718 GCTGCTACAGTAACAAGCCG 59.278 55.000 0.00 0.00 35.33 5.52
2713 3046 1.606994 CGTGGGCTGCTACAGTAACAA 60.607 52.381 0.00 0.00 33.43 2.83
2714 3047 0.037697 CGTGGGCTGCTACAGTAACA 60.038 55.000 0.00 0.00 33.43 2.41
2715 3048 0.245539 TCGTGGGCTGCTACAGTAAC 59.754 55.000 0.00 0.00 33.43 2.50
2741 3074 1.798735 CTTGAAGATGGTGGCGCTG 59.201 57.895 7.64 0.00 0.00 5.18
2742 3075 2.042831 GCTTGAAGATGGTGGCGCT 61.043 57.895 7.64 0.00 0.00 5.92
2743 3076 2.042831 AGCTTGAAGATGGTGGCGC 61.043 57.895 0.00 0.00 0.00 6.53
2745 3078 0.964358 AGCAGCTTGAAGATGGTGGC 60.964 55.000 14.75 0.00 41.15 5.01
2746 3079 3.261250 AGCAGCTTGAAGATGGTGG 57.739 52.632 14.75 0.00 41.15 4.61
2751 3089 0.680280 CCTGGCAGCAGCTTGAAGAT 60.680 55.000 9.56 0.00 41.70 2.40
2754 3092 1.303074 CTCCTGGCAGCAGCTTGAA 60.303 57.895 9.56 0.00 41.70 2.69
2759 3097 2.516460 CATCCTCCTGGCAGCAGC 60.516 66.667 9.56 0.00 41.10 5.25
2817 3155 3.368571 GCAACAGGCAGGCAGGAC 61.369 66.667 0.00 0.00 43.97 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.