Multiple sequence alignment - TraesCS7B01G062400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G062400 chr7B 100.000 4327 0 0 1 4327 66275612 66279938 0.000000e+00 7991
1 TraesCS7B01G062400 chr7B 96.364 2558 85 7 485 3039 56932165 56929613 0.000000e+00 4202
2 TraesCS7B01G062400 chr7B 97.641 1738 35 3 2590 4327 56929854 56928123 0.000000e+00 2977
3 TraesCS7B01G062400 chr2B 97.166 3776 96 8 481 4254 105873019 105876785 0.000000e+00 6370
4 TraesCS7B01G062400 chr6B 96.402 2557 87 5 478 3032 8906290 8908843 0.000000e+00 4207
5 TraesCS7B01G062400 chr6B 98.159 1738 26 3 2590 4327 8908606 8910337 0.000000e+00 3027
6 TraesCS7B01G062400 chr6B 95.754 1531 64 1 2795 4325 116265070 116263541 0.000000e+00 2466
7 TraesCS7B01G062400 chr6B 94.984 1535 73 1 2795 4325 78499566 78498032 0.000000e+00 2405
8 TraesCS7B01G062400 chr6B 93.625 753 32 8 2083 2832 116265565 116264826 0.000000e+00 1110
9 TraesCS7B01G062400 chr4A 96.172 2560 89 8 485 3039 709026359 709023804 0.000000e+00 4176
10 TraesCS7B01G062400 chr4A 97.527 1739 36 4 2590 4327 709024046 709022314 0.000000e+00 2966
11 TraesCS7B01G062400 chr4A 97.001 1534 43 3 2795 4327 662042987 662041456 0.000000e+00 2575
12 TraesCS7B01G062400 chr4A 95.229 1614 72 2 483 2091 662045256 662043643 0.000000e+00 2549
13 TraesCS7B01G062400 chr4B 96.000 2550 98 4 485 3032 188474449 188476996 0.000000e+00 4141
14 TraesCS7B01G062400 chr4B 97.811 1736 32 3 2590 4325 188476759 188478488 0.000000e+00 2990
15 TraesCS7B01G062400 chr4B 89.692 747 58 8 2083 2827 553302031 553302760 0.000000e+00 935
16 TraesCS7B01G062400 chr3B 95.709 1608 67 2 485 2091 719995018 719993412 0.000000e+00 2586
17 TraesCS7B01G062400 chr3B 95.522 1608 69 3 485 2091 720012121 720010516 0.000000e+00 2567
18 TraesCS7B01G062400 chr3B 96.928 1530 45 1 2798 4327 719992754 719991227 0.000000e+00 2564
19 TraesCS7B01G062400 chr3B 93.625 753 32 8 2083 2832 799737874 799737135 0.000000e+00 1110
20 TraesCS7B01G062400 chr3B 93.048 748 36 8 2088 2832 719993247 719992513 0.000000e+00 1079
21 TraesCS7B01G062400 chr3B 91.114 754 46 9 2083 2832 64690736 64690000 0.000000e+00 1002
22 TraesCS7B01G062400 chr1B 94.675 1615 83 3 479 2091 669870742 669869129 0.000000e+00 2503
23 TraesCS7B01G062400 chr1B 94.157 753 28 8 2083 2832 669868968 669868229 0.000000e+00 1133
24 TraesCS7B01G062400 chr1B 90.642 748 53 9 2083 2827 587058693 587059426 0.000000e+00 977
25 TraesCS7B01G062400 chr1B 90.642 748 53 9 2083 2827 587081077 587081810 0.000000e+00 977
26 TraesCS7B01G062400 chr1D 87.931 348 42 0 136 483 26206803 26206456 1.120000e-110 411
27 TraesCS7B01G062400 chr1D 86.819 349 44 2 136 483 86521495 86521148 5.250000e-104 388


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G062400 chr7B 66275612 66279938 4326 False 7991.000000 7991 100.000000 1 4327 1 chr7B.!!$F1 4326
1 TraesCS7B01G062400 chr7B 56928123 56932165 4042 True 3589.500000 4202 97.002500 485 4327 2 chr7B.!!$R1 3842
2 TraesCS7B01G062400 chr2B 105873019 105876785 3766 False 6370.000000 6370 97.166000 481 4254 1 chr2B.!!$F1 3773
3 TraesCS7B01G062400 chr6B 8906290 8910337 4047 False 3617.000000 4207 97.280500 478 4327 2 chr6B.!!$F1 3849
4 TraesCS7B01G062400 chr6B 78498032 78499566 1534 True 2405.000000 2405 94.984000 2795 4325 1 chr6B.!!$R1 1530
5 TraesCS7B01G062400 chr6B 116263541 116265565 2024 True 1788.000000 2466 94.689500 2083 4325 2 chr6B.!!$R2 2242
6 TraesCS7B01G062400 chr4A 709022314 709026359 4045 True 3571.000000 4176 96.849500 485 4327 2 chr4A.!!$R2 3842
7 TraesCS7B01G062400 chr4A 662041456 662045256 3800 True 2562.000000 2575 96.115000 483 4327 2 chr4A.!!$R1 3844
8 TraesCS7B01G062400 chr4B 188474449 188478488 4039 False 3565.500000 4141 96.905500 485 4325 2 chr4B.!!$F2 3840
9 TraesCS7B01G062400 chr4B 553302031 553302760 729 False 935.000000 935 89.692000 2083 2827 1 chr4B.!!$F1 744
10 TraesCS7B01G062400 chr3B 720010516 720012121 1605 True 2567.000000 2567 95.522000 485 2091 1 chr3B.!!$R2 1606
11 TraesCS7B01G062400 chr3B 719991227 719995018 3791 True 2076.333333 2586 95.228333 485 4327 3 chr3B.!!$R4 3842
12 TraesCS7B01G062400 chr3B 799737135 799737874 739 True 1110.000000 1110 93.625000 2083 2832 1 chr3B.!!$R3 749
13 TraesCS7B01G062400 chr3B 64690000 64690736 736 True 1002.000000 1002 91.114000 2083 2832 1 chr3B.!!$R1 749
14 TraesCS7B01G062400 chr1B 669868229 669870742 2513 True 1818.000000 2503 94.416000 479 2832 2 chr1B.!!$R1 2353
15 TraesCS7B01G062400 chr1B 587058693 587059426 733 False 977.000000 977 90.642000 2083 2827 1 chr1B.!!$F1 744
16 TraesCS7B01G062400 chr1B 587081077 587081810 733 False 977.000000 977 90.642000 2083 2827 1 chr1B.!!$F2 744

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
318 319 0.037975 AAAAGCTGCTTCGGCCAATG 60.038 50.000 16.28 0.00 40.91 2.82 F
323 324 0.108520 CTGCTTCGGCCAATGCAATT 60.109 50.000 5.67 0.00 40.91 2.32 F
430 431 0.170561 GGAGCAGTTGCAGCAATCTG 59.829 55.000 23.07 23.07 45.16 2.90 F
893 899 0.329261 CCCCAAATCAGCTCAGTCCA 59.671 55.000 0.00 0.00 0.00 4.02 F
1127 1133 0.389426 GATGTTGTACCCGCAGTCGT 60.389 55.000 0.00 0.00 0.00 4.34 F
1216 1222 2.598099 TGGTGGTGACGGCGTCTA 60.598 61.111 36.17 21.98 33.15 2.59 F
1591 1601 3.314331 CCACGACAGGGGCTGAGT 61.314 66.667 0.00 0.00 31.86 3.41 F
3147 4149 0.842635 CAAGATCAGGGAGAAGGGGG 59.157 60.000 0.00 0.00 0.00 5.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1216 1222 1.198713 CCTACATCCAGTGAGCCACT 58.801 55.000 2.38 2.38 46.51 4.00 R
1259 1265 1.670811 GAAGCATTACCACATCCACCG 59.329 52.381 0.00 0.00 0.00 4.94 R
1346 1353 2.195922 GCCGCAATCAATCACAAATCC 58.804 47.619 0.00 0.00 0.00 3.01 R
2136 2316 5.355071 CAGTATGCAAAGGTCAAGCAATCTA 59.645 40.000 0.00 0.00 42.15 1.98 R
2784 3169 5.648178 TGCACAAACATCAGATAATTGCT 57.352 34.783 7.09 0.00 0.00 3.91 R
3147 4149 1.403780 CCACTTGTAGTACACCGCCTC 60.404 57.143 1.43 0.00 0.00 4.70 R
3273 4279 1.210538 TGCTCTGCCCTGATCTTCAT 58.789 50.000 0.00 0.00 0.00 2.57 R
4052 5062 7.634671 ATCATGCTCACTTATGAACATTGAA 57.365 32.000 0.00 0.00 39.19 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.965258 TGCCAGGGTGCACGGAAT 61.965 61.111 11.45 0.00 36.04 3.01
22 23 3.443045 GCCAGGGTGCACGGAATG 61.443 66.667 11.45 6.50 0.00 2.67
31 32 2.676121 CACGGAATGCTGGCCCAA 60.676 61.111 0.00 0.00 0.00 4.12
32 33 2.361610 ACGGAATGCTGGCCCAAG 60.362 61.111 0.00 0.00 0.00 3.61
33 34 3.830192 CGGAATGCTGGCCCAAGC 61.830 66.667 8.13 8.13 43.82 4.01
51 52 4.814294 AAGGCGCCGCGGTCTTAG 62.814 66.667 28.70 14.07 0.00 2.18
54 55 3.849953 GCGCCGCGGTCTTAGTTG 61.850 66.667 28.70 7.64 0.00 3.16
55 56 3.849953 CGCCGCGGTCTTAGTTGC 61.850 66.667 28.70 7.63 0.00 4.17
58 59 3.186047 CGCGGTCTTAGTTGCGGG 61.186 66.667 0.00 0.00 46.31 6.13
59 60 3.497031 GCGGTCTTAGTTGCGGGC 61.497 66.667 0.00 0.00 0.00 6.13
60 61 3.186047 CGGTCTTAGTTGCGGGCG 61.186 66.667 0.00 0.00 0.00 6.13
61 62 2.047560 GGTCTTAGTTGCGGGCGT 60.048 61.111 0.00 0.00 0.00 5.68
62 63 2.388232 GGTCTTAGTTGCGGGCGTG 61.388 63.158 0.00 0.00 0.00 5.34
63 64 2.047655 TCTTAGTTGCGGGCGTGG 60.048 61.111 0.00 0.00 0.00 4.94
64 65 3.799755 CTTAGTTGCGGGCGTGGC 61.800 66.667 0.00 0.00 0.00 5.01
76 77 4.680237 CGTGGCCCAAGCACTCGA 62.680 66.667 0.00 0.00 42.56 4.04
77 78 2.743928 GTGGCCCAAGCACTCGAG 60.744 66.667 11.84 11.84 42.56 4.04
78 79 4.020617 TGGCCCAAGCACTCGAGG 62.021 66.667 18.41 6.97 42.56 4.63
81 82 3.710722 CCCAAGCACTCGAGGCCT 61.711 66.667 18.41 3.86 0.00 5.19
82 83 2.348998 CCAAGCACTCGAGGCCTT 59.651 61.111 18.41 14.89 0.00 4.35
83 84 2.037136 CCAAGCACTCGAGGCCTTG 61.037 63.158 27.12 27.12 0.00 3.61
84 85 2.359230 AAGCACTCGAGGCCTTGC 60.359 61.111 17.78 17.78 35.08 4.01
85 86 4.749310 AGCACTCGAGGCCTTGCG 62.749 66.667 19.01 14.39 40.04 4.85
113 114 2.858868 CGTGAAGCAGAGCACAGC 59.141 61.111 0.00 0.00 34.78 4.40
114 115 1.667191 CGTGAAGCAGAGCACAGCT 60.667 57.895 0.00 0.00 43.88 4.24
115 116 1.867615 GTGAAGCAGAGCACAGCTG 59.132 57.895 13.48 13.48 39.88 4.24
125 126 2.433145 CACAGCTGCGTCACCGAT 60.433 61.111 15.27 0.00 35.63 4.18
126 127 2.029288 CACAGCTGCGTCACCGATT 61.029 57.895 15.27 0.00 35.63 3.34
127 128 2.029288 ACAGCTGCGTCACCGATTG 61.029 57.895 15.27 0.00 35.63 2.67
128 129 1.737735 CAGCTGCGTCACCGATTGA 60.738 57.895 0.00 0.00 35.63 2.57
129 130 1.086067 CAGCTGCGTCACCGATTGAT 61.086 55.000 0.00 0.00 36.32 2.57
130 131 0.807667 AGCTGCGTCACCGATTGATC 60.808 55.000 0.00 0.00 36.32 2.92
131 132 0.807667 GCTGCGTCACCGATTGATCT 60.808 55.000 0.00 0.00 36.32 2.75
132 133 1.203928 CTGCGTCACCGATTGATCTC 58.796 55.000 0.00 0.00 36.32 2.75
133 134 0.817654 TGCGTCACCGATTGATCTCT 59.182 50.000 0.00 0.00 36.32 3.10
134 135 1.204704 TGCGTCACCGATTGATCTCTT 59.795 47.619 0.00 0.00 36.32 2.85
135 136 1.855360 GCGTCACCGATTGATCTCTTC 59.145 52.381 0.00 0.00 36.32 2.87
136 137 2.735444 GCGTCACCGATTGATCTCTTCA 60.735 50.000 0.00 0.00 36.32 3.02
137 138 4.223743 GCGTCACCGATTGATCTCTTCAA 61.224 47.826 0.00 0.00 40.61 2.69
138 139 6.007281 GCGTCACCGATTGATCTCTTCAAG 62.007 50.000 0.00 0.00 40.10 3.02
151 152 3.509575 TCTCTTCAAGAGAGTCTCAAGGC 59.490 47.826 22.05 0.00 45.77 4.35
152 153 3.234353 TCTTCAAGAGAGTCTCAAGGCA 58.766 45.455 22.05 0.94 32.06 4.75
153 154 3.257873 TCTTCAAGAGAGTCTCAAGGCAG 59.742 47.826 22.05 10.23 32.06 4.85
154 155 2.881734 TCAAGAGAGTCTCAAGGCAGA 58.118 47.619 22.05 7.37 32.06 4.26
155 156 2.824936 TCAAGAGAGTCTCAAGGCAGAG 59.175 50.000 22.05 1.01 36.97 3.35
156 157 1.851304 AGAGAGTCTCAAGGCAGAGG 58.149 55.000 22.05 0.00 36.30 3.69
157 158 1.357420 AGAGAGTCTCAAGGCAGAGGA 59.643 52.381 22.05 0.00 36.30 3.71
158 159 2.175202 GAGAGTCTCAAGGCAGAGGAA 58.825 52.381 15.53 0.00 36.30 3.36
159 160 2.765699 GAGAGTCTCAAGGCAGAGGAAT 59.234 50.000 15.53 0.00 36.30 3.01
160 161 3.180507 AGAGTCTCAAGGCAGAGGAATT 58.819 45.455 1.94 0.00 36.30 2.17
161 162 3.586618 AGAGTCTCAAGGCAGAGGAATTT 59.413 43.478 1.94 0.00 36.30 1.82
162 163 4.780021 AGAGTCTCAAGGCAGAGGAATTTA 59.220 41.667 1.94 0.00 36.30 1.40
163 164 5.428131 AGAGTCTCAAGGCAGAGGAATTTAT 59.572 40.000 1.94 0.00 36.30 1.40
164 165 6.069731 AGAGTCTCAAGGCAGAGGAATTTATT 60.070 38.462 1.94 0.00 36.30 1.40
165 166 7.126421 AGAGTCTCAAGGCAGAGGAATTTATTA 59.874 37.037 1.94 0.00 36.30 0.98
166 167 7.278875 AGTCTCAAGGCAGAGGAATTTATTAG 58.721 38.462 7.06 0.00 36.30 1.73
167 168 7.126421 AGTCTCAAGGCAGAGGAATTTATTAGA 59.874 37.037 7.06 0.00 36.30 2.10
168 169 7.936301 GTCTCAAGGCAGAGGAATTTATTAGAT 59.064 37.037 7.06 0.00 36.30 1.98
169 170 8.497745 TCTCAAGGCAGAGGAATTTATTAGATT 58.502 33.333 7.06 0.00 36.30 2.40
170 171 8.455903 TCAAGGCAGAGGAATTTATTAGATTG 57.544 34.615 0.00 0.00 0.00 2.67
171 172 7.503566 TCAAGGCAGAGGAATTTATTAGATTGG 59.496 37.037 0.00 0.00 0.00 3.16
172 173 6.915786 AGGCAGAGGAATTTATTAGATTGGT 58.084 36.000 0.00 0.00 0.00 3.67
173 174 6.774656 AGGCAGAGGAATTTATTAGATTGGTG 59.225 38.462 0.00 0.00 0.00 4.17
174 175 6.015940 GGCAGAGGAATTTATTAGATTGGTGG 60.016 42.308 0.00 0.00 0.00 4.61
175 176 6.547510 GCAGAGGAATTTATTAGATTGGTGGT 59.452 38.462 0.00 0.00 0.00 4.16
176 177 7.719633 GCAGAGGAATTTATTAGATTGGTGGTA 59.280 37.037 0.00 0.00 0.00 3.25
177 178 9.627123 CAGAGGAATTTATTAGATTGGTGGTAA 57.373 33.333 0.00 0.00 0.00 2.85
178 179 9.628500 AGAGGAATTTATTAGATTGGTGGTAAC 57.372 33.333 0.00 0.00 0.00 2.50
179 180 9.628500 GAGGAATTTATTAGATTGGTGGTAACT 57.372 33.333 0.00 0.00 37.61 2.24
180 181 9.628500 AGGAATTTATTAGATTGGTGGTAACTC 57.372 33.333 0.00 0.00 37.61 3.01
181 182 9.628500 GGAATTTATTAGATTGGTGGTAACTCT 57.372 33.333 0.00 0.00 37.61 3.24
183 184 9.975218 AATTTATTAGATTGGTGGTAACTCTGT 57.025 29.630 0.00 0.00 37.61 3.41
184 185 8.786826 TTTATTAGATTGGTGGTAACTCTGTG 57.213 34.615 0.00 0.00 37.61 3.66
185 186 3.703001 AGATTGGTGGTAACTCTGTGG 57.297 47.619 0.00 0.00 37.61 4.17
186 187 2.305927 AGATTGGTGGTAACTCTGTGGG 59.694 50.000 0.00 0.00 37.61 4.61
187 188 0.109723 TTGGTGGTAACTCTGTGGGC 59.890 55.000 0.00 0.00 37.61 5.36
188 189 1.375523 GGTGGTAACTCTGTGGGCG 60.376 63.158 0.00 0.00 37.61 6.13
189 190 1.669440 GTGGTAACTCTGTGGGCGA 59.331 57.895 0.00 0.00 37.61 5.54
190 191 0.249398 GTGGTAACTCTGTGGGCGAT 59.751 55.000 0.00 0.00 37.61 4.58
191 192 0.981183 TGGTAACTCTGTGGGCGATT 59.019 50.000 0.00 0.00 37.61 3.34
192 193 1.349688 TGGTAACTCTGTGGGCGATTT 59.650 47.619 0.00 0.00 37.61 2.17
193 194 2.224670 TGGTAACTCTGTGGGCGATTTT 60.225 45.455 0.00 0.00 37.61 1.82
194 195 2.817844 GGTAACTCTGTGGGCGATTTTT 59.182 45.455 0.00 0.00 0.00 1.94
195 196 3.365969 GGTAACTCTGTGGGCGATTTTTG 60.366 47.826 0.00 0.00 0.00 2.44
196 197 1.247567 ACTCTGTGGGCGATTTTTGG 58.752 50.000 0.00 0.00 0.00 3.28
197 198 1.202879 ACTCTGTGGGCGATTTTTGGA 60.203 47.619 0.00 0.00 0.00 3.53
198 199 1.470098 CTCTGTGGGCGATTTTTGGAG 59.530 52.381 0.00 0.00 0.00 3.86
199 200 0.109132 CTGTGGGCGATTTTTGGAGC 60.109 55.000 0.00 0.00 0.00 4.70
200 201 0.539438 TGTGGGCGATTTTTGGAGCT 60.539 50.000 0.00 0.00 0.00 4.09
201 202 1.271652 TGTGGGCGATTTTTGGAGCTA 60.272 47.619 0.00 0.00 0.00 3.32
202 203 1.401905 GTGGGCGATTTTTGGAGCTAG 59.598 52.381 0.00 0.00 0.00 3.42
203 204 1.025041 GGGCGATTTTTGGAGCTAGG 58.975 55.000 0.00 0.00 0.00 3.02
204 205 1.408266 GGGCGATTTTTGGAGCTAGGA 60.408 52.381 0.00 0.00 0.00 2.94
205 206 1.943340 GGCGATTTTTGGAGCTAGGAG 59.057 52.381 0.00 0.00 0.00 3.69
206 207 1.943340 GCGATTTTTGGAGCTAGGAGG 59.057 52.381 0.00 0.00 0.00 4.30
207 208 2.420129 GCGATTTTTGGAGCTAGGAGGA 60.420 50.000 0.00 0.00 0.00 3.71
208 209 3.873910 CGATTTTTGGAGCTAGGAGGAA 58.126 45.455 0.00 0.00 0.00 3.36
209 210 4.261801 CGATTTTTGGAGCTAGGAGGAAA 58.738 43.478 0.00 0.00 0.00 3.13
210 211 4.333926 CGATTTTTGGAGCTAGGAGGAAAG 59.666 45.833 0.00 0.00 0.00 2.62
211 212 2.789409 TTTGGAGCTAGGAGGAAAGC 57.211 50.000 0.00 0.00 39.08 3.51
212 213 1.656587 TTGGAGCTAGGAGGAAAGCA 58.343 50.000 0.00 0.00 41.32 3.91
213 214 1.656587 TGGAGCTAGGAGGAAAGCAA 58.343 50.000 0.00 0.00 41.32 3.91
214 215 2.200081 TGGAGCTAGGAGGAAAGCAAT 58.800 47.619 0.00 0.00 41.32 3.56
215 216 2.578021 TGGAGCTAGGAGGAAAGCAATT 59.422 45.455 0.00 0.00 41.32 2.32
216 217 3.210227 GGAGCTAGGAGGAAAGCAATTC 58.790 50.000 0.00 0.00 41.32 2.17
217 218 3.370953 GGAGCTAGGAGGAAAGCAATTCA 60.371 47.826 4.87 0.00 41.32 2.57
218 219 4.459330 GAGCTAGGAGGAAAGCAATTCAT 58.541 43.478 4.87 0.00 41.32 2.57
219 220 4.205587 AGCTAGGAGGAAAGCAATTCATG 58.794 43.478 4.87 0.00 41.32 3.07
220 221 4.080129 AGCTAGGAGGAAAGCAATTCATGA 60.080 41.667 0.00 0.00 41.32 3.07
221 222 4.641989 GCTAGGAGGAAAGCAATTCATGAA 59.358 41.667 11.26 11.26 39.98 2.57
222 223 5.221009 GCTAGGAGGAAAGCAATTCATGAAG 60.221 44.000 14.54 2.24 39.98 3.02
223 224 4.021916 AGGAGGAAAGCAATTCATGAAGG 58.978 43.478 14.54 9.65 39.98 3.46
224 225 4.019174 GGAGGAAAGCAATTCATGAAGGA 58.981 43.478 14.54 0.00 39.98 3.36
225 226 4.463891 GGAGGAAAGCAATTCATGAAGGAA 59.536 41.667 14.54 0.00 39.98 3.36
226 227 5.128335 GGAGGAAAGCAATTCATGAAGGAAT 59.872 40.000 14.54 0.00 39.98 3.01
227 228 5.974108 AGGAAAGCAATTCATGAAGGAATG 58.026 37.500 14.54 10.80 39.98 2.67
228 229 5.482878 AGGAAAGCAATTCATGAAGGAATGT 59.517 36.000 14.54 0.00 39.98 2.71
229 230 6.013984 AGGAAAGCAATTCATGAAGGAATGTT 60.014 34.615 14.54 5.71 39.98 2.71
230 231 6.652062 GGAAAGCAATTCATGAAGGAATGTTT 59.348 34.615 14.54 10.85 39.98 2.83
231 232 7.148523 GGAAAGCAATTCATGAAGGAATGTTTC 60.149 37.037 14.54 15.18 39.98 2.78
232 233 6.349243 AGCAATTCATGAAGGAATGTTTCA 57.651 33.333 14.54 0.00 37.55 2.69
233 234 6.761312 AGCAATTCATGAAGGAATGTTTCAA 58.239 32.000 14.54 0.00 38.01 2.69
234 235 7.218614 AGCAATTCATGAAGGAATGTTTCAAA 58.781 30.769 14.54 0.00 38.01 2.69
235 236 7.386848 AGCAATTCATGAAGGAATGTTTCAAAG 59.613 33.333 14.54 0.00 38.01 2.77
236 237 7.172019 GCAATTCATGAAGGAATGTTTCAAAGT 59.828 33.333 14.54 0.00 38.01 2.66
237 238 8.706035 CAATTCATGAAGGAATGTTTCAAAGTC 58.294 33.333 14.54 0.00 38.01 3.01
238 239 6.331369 TCATGAAGGAATGTTTCAAAGTCC 57.669 37.500 0.00 0.00 38.01 3.85
239 240 6.070656 TCATGAAGGAATGTTTCAAAGTCCT 58.929 36.000 0.00 0.00 40.51 3.85
240 241 6.207417 TCATGAAGGAATGTTTCAAAGTCCTC 59.793 38.462 0.00 0.00 37.75 3.71
241 242 5.445069 TGAAGGAATGTTTCAAAGTCCTCA 58.555 37.500 0.00 0.00 37.75 3.86
242 243 5.532406 TGAAGGAATGTTTCAAAGTCCTCAG 59.468 40.000 0.00 0.00 37.75 3.35
243 244 5.053978 AGGAATGTTTCAAAGTCCTCAGT 57.946 39.130 0.00 0.00 33.26 3.41
244 245 5.066593 AGGAATGTTTCAAAGTCCTCAGTC 58.933 41.667 0.00 0.00 33.26 3.51
245 246 4.216472 GGAATGTTTCAAAGTCCTCAGTCC 59.784 45.833 0.00 0.00 34.07 3.85
246 247 3.924114 TGTTTCAAAGTCCTCAGTCCA 57.076 42.857 0.00 0.00 0.00 4.02
247 248 4.437682 TGTTTCAAAGTCCTCAGTCCAT 57.562 40.909 0.00 0.00 0.00 3.41
248 249 4.792068 TGTTTCAAAGTCCTCAGTCCATT 58.208 39.130 0.00 0.00 0.00 3.16
249 250 5.935945 TGTTTCAAAGTCCTCAGTCCATTA 58.064 37.500 0.00 0.00 0.00 1.90
250 251 6.361433 TGTTTCAAAGTCCTCAGTCCATTAA 58.639 36.000 0.00 0.00 0.00 1.40
251 252 6.262273 TGTTTCAAAGTCCTCAGTCCATTAAC 59.738 38.462 0.00 0.00 0.00 2.01
252 253 4.566004 TCAAAGTCCTCAGTCCATTAACG 58.434 43.478 0.00 0.00 0.00 3.18
253 254 4.282449 TCAAAGTCCTCAGTCCATTAACGA 59.718 41.667 0.00 0.00 0.00 3.85
254 255 5.046591 TCAAAGTCCTCAGTCCATTAACGAT 60.047 40.000 0.00 0.00 0.00 3.73
255 256 5.422214 AAGTCCTCAGTCCATTAACGATT 57.578 39.130 0.00 0.00 0.00 3.34
256 257 5.422214 AGTCCTCAGTCCATTAACGATTT 57.578 39.130 0.00 0.00 0.00 2.17
257 258 5.420409 AGTCCTCAGTCCATTAACGATTTC 58.580 41.667 0.00 0.00 0.00 2.17
258 259 5.046591 AGTCCTCAGTCCATTAACGATTTCA 60.047 40.000 0.00 0.00 0.00 2.69
259 260 5.817816 GTCCTCAGTCCATTAACGATTTCAT 59.182 40.000 0.00 0.00 0.00 2.57
260 261 6.984474 GTCCTCAGTCCATTAACGATTTCATA 59.016 38.462 0.00 0.00 0.00 2.15
261 262 7.494625 GTCCTCAGTCCATTAACGATTTCATAA 59.505 37.037 0.00 0.00 0.00 1.90
262 263 7.710907 TCCTCAGTCCATTAACGATTTCATAAG 59.289 37.037 0.00 0.00 0.00 1.73
263 264 7.246674 TCAGTCCATTAACGATTTCATAAGC 57.753 36.000 0.00 0.00 0.00 3.09
264 265 7.047891 TCAGTCCATTAACGATTTCATAAGCT 58.952 34.615 0.00 0.00 0.00 3.74
265 266 7.224753 TCAGTCCATTAACGATTTCATAAGCTC 59.775 37.037 0.00 0.00 0.00 4.09
266 267 6.483640 AGTCCATTAACGATTTCATAAGCTCC 59.516 38.462 0.00 0.00 0.00 4.70
267 268 6.483640 GTCCATTAACGATTTCATAAGCTCCT 59.516 38.462 0.00 0.00 0.00 3.69
268 269 7.656137 GTCCATTAACGATTTCATAAGCTCCTA 59.344 37.037 0.00 0.00 0.00 2.94
269 270 7.656137 TCCATTAACGATTTCATAAGCTCCTAC 59.344 37.037 0.00 0.00 0.00 3.18
270 271 7.657761 CCATTAACGATTTCATAAGCTCCTACT 59.342 37.037 0.00 0.00 0.00 2.57
271 272 9.046296 CATTAACGATTTCATAAGCTCCTACTT 57.954 33.333 0.00 0.00 0.00 2.24
307 308 7.684937 ATATCATCTATCCTCAAAAAGCTGC 57.315 36.000 0.00 0.00 0.00 5.25
308 309 5.108187 TCATCTATCCTCAAAAAGCTGCT 57.892 39.130 0.00 0.00 0.00 4.24
309 310 5.503927 TCATCTATCCTCAAAAAGCTGCTT 58.496 37.500 9.53 9.53 0.00 3.91
310 311 5.587844 TCATCTATCCTCAAAAAGCTGCTTC 59.412 40.000 16.28 0.00 0.00 3.86
311 312 3.935203 TCTATCCTCAAAAAGCTGCTTCG 59.065 43.478 16.28 7.65 0.00 3.79
312 313 1.238439 TCCTCAAAAAGCTGCTTCGG 58.762 50.000 16.28 10.99 0.00 4.30
313 314 0.387750 CCTCAAAAAGCTGCTTCGGC 60.388 55.000 16.28 0.00 42.19 5.54
314 315 0.387750 CTCAAAAAGCTGCTTCGGCC 60.388 55.000 16.28 0.00 40.91 6.13
315 316 1.106351 TCAAAAAGCTGCTTCGGCCA 61.106 50.000 16.28 0.00 40.91 5.36
316 317 0.249405 CAAAAAGCTGCTTCGGCCAA 60.249 50.000 16.28 0.00 40.91 4.52
317 318 0.681175 AAAAAGCTGCTTCGGCCAAT 59.319 45.000 16.28 0.00 40.91 3.16
318 319 0.037975 AAAAGCTGCTTCGGCCAATG 60.038 50.000 16.28 0.00 40.91 2.82
319 320 2.496828 AAAGCTGCTTCGGCCAATGC 62.497 55.000 16.28 0.00 40.91 3.56
320 321 3.751246 GCTGCTTCGGCCAATGCA 61.751 61.111 2.24 3.23 40.91 3.96
321 322 2.964174 CTGCTTCGGCCAATGCAA 59.036 55.556 5.67 0.00 40.91 4.08
322 323 1.514087 CTGCTTCGGCCAATGCAAT 59.486 52.632 5.67 0.00 40.91 3.56
323 324 0.108520 CTGCTTCGGCCAATGCAATT 60.109 50.000 5.67 0.00 40.91 2.32
324 325 1.134753 CTGCTTCGGCCAATGCAATTA 59.865 47.619 5.67 0.00 40.91 1.40
325 326 1.755959 TGCTTCGGCCAATGCAATTAT 59.244 42.857 0.95 0.00 40.91 1.28
326 327 2.954989 TGCTTCGGCCAATGCAATTATA 59.045 40.909 0.95 0.00 40.91 0.98
327 328 3.004629 TGCTTCGGCCAATGCAATTATAG 59.995 43.478 0.95 0.00 40.91 1.31
328 329 3.568538 CTTCGGCCAATGCAATTATAGC 58.431 45.455 2.24 0.00 40.13 2.97
329 330 6.572848 GCTTCGGCCAATGCAATTATAGCA 62.573 45.833 2.24 0.00 39.77 3.49
330 331 2.954989 TCGGCCAATGCAATTATAGCAA 59.045 40.909 2.24 0.00 46.27 3.91
331 332 3.004629 TCGGCCAATGCAATTATAGCAAG 59.995 43.478 2.24 0.00 46.27 4.01
332 333 3.004629 CGGCCAATGCAATTATAGCAAGA 59.995 43.478 2.24 0.00 46.27 3.02
333 334 4.301628 GGCCAATGCAATTATAGCAAGAC 58.698 43.478 0.00 0.00 46.27 3.01
334 335 4.301628 GCCAATGCAATTATAGCAAGACC 58.698 43.478 0.00 0.00 46.27 3.85
335 336 4.202141 GCCAATGCAATTATAGCAAGACCA 60.202 41.667 0.00 0.00 46.27 4.02
336 337 5.284079 CCAATGCAATTATAGCAAGACCAC 58.716 41.667 0.00 0.00 46.27 4.16
337 338 4.818534 ATGCAATTATAGCAAGACCACG 57.181 40.909 0.00 0.00 46.27 4.94
338 339 3.867857 TGCAATTATAGCAAGACCACGA 58.132 40.909 0.00 0.00 39.39 4.35
339 340 3.621268 TGCAATTATAGCAAGACCACGAC 59.379 43.478 0.00 0.00 39.39 4.34
340 341 3.302480 GCAATTATAGCAAGACCACGACG 60.302 47.826 0.00 0.00 0.00 5.12
341 342 4.109766 CAATTATAGCAAGACCACGACGA 58.890 43.478 0.00 0.00 0.00 4.20
342 343 4.585955 ATTATAGCAAGACCACGACGAT 57.414 40.909 0.00 0.00 0.00 3.73
343 344 2.209838 ATAGCAAGACCACGACGATG 57.790 50.000 0.00 0.00 0.00 3.84
344 345 0.172578 TAGCAAGACCACGACGATGG 59.827 55.000 0.00 8.39 46.10 3.51
345 346 2.740714 GCAAGACCACGACGATGGC 61.741 63.158 14.00 8.66 44.33 4.40
346 347 2.100631 CAAGACCACGACGATGGCC 61.101 63.158 14.00 0.00 44.33 5.36
347 348 3.642778 AAGACCACGACGATGGCCG 62.643 63.158 14.00 0.00 44.33 6.13
354 355 4.899239 GACGATGGCCGCCTCTGG 62.899 72.222 11.61 2.10 43.32 3.86
364 365 2.268920 GCCTCTGGCGGACAATCA 59.731 61.111 0.00 0.00 39.62 2.57
365 366 2.109126 GCCTCTGGCGGACAATCAC 61.109 63.158 0.00 0.00 39.62 3.06
366 367 1.811266 CCTCTGGCGGACAATCACG 60.811 63.158 0.00 0.00 0.00 4.35
374 375 1.895051 CGGACAATCACGCCAAAATC 58.105 50.000 0.00 0.00 0.00 2.17
375 376 1.198867 CGGACAATCACGCCAAAATCA 59.801 47.619 0.00 0.00 0.00 2.57
376 377 2.351253 CGGACAATCACGCCAAAATCAA 60.351 45.455 0.00 0.00 0.00 2.57
377 378 2.986479 GGACAATCACGCCAAAATCAAC 59.014 45.455 0.00 0.00 0.00 3.18
378 379 3.551863 GGACAATCACGCCAAAATCAACA 60.552 43.478 0.00 0.00 0.00 3.33
379 380 3.380142 ACAATCACGCCAAAATCAACAC 58.620 40.909 0.00 0.00 0.00 3.32
380 381 2.723124 ATCACGCCAAAATCAACACC 57.277 45.000 0.00 0.00 0.00 4.16
381 382 0.309302 TCACGCCAAAATCAACACCG 59.691 50.000 0.00 0.00 0.00 4.94
382 383 0.309302 CACGCCAAAATCAACACCGA 59.691 50.000 0.00 0.00 0.00 4.69
383 384 1.068610 CACGCCAAAATCAACACCGAT 60.069 47.619 0.00 0.00 0.00 4.18
384 385 1.068610 ACGCCAAAATCAACACCGATG 60.069 47.619 0.00 0.00 0.00 3.84
385 386 1.068610 CGCCAAAATCAACACCGATGT 60.069 47.619 0.00 0.00 42.46 3.06
396 397 2.819595 CCGATGTTGCGGTGGGAG 60.820 66.667 0.00 0.00 46.07 4.30
397 398 2.819595 CGATGTTGCGGTGGGAGG 60.820 66.667 0.00 0.00 0.00 4.30
398 399 2.351276 GATGTTGCGGTGGGAGGT 59.649 61.111 0.00 0.00 0.00 3.85
399 400 1.303317 GATGTTGCGGTGGGAGGTT 60.303 57.895 0.00 0.00 0.00 3.50
400 401 1.586154 GATGTTGCGGTGGGAGGTTG 61.586 60.000 0.00 0.00 0.00 3.77
401 402 2.063015 ATGTTGCGGTGGGAGGTTGA 62.063 55.000 0.00 0.00 0.00 3.18
402 403 1.966451 GTTGCGGTGGGAGGTTGAG 60.966 63.158 0.00 0.00 0.00 3.02
403 404 3.190738 TTGCGGTGGGAGGTTGAGG 62.191 63.158 0.00 0.00 0.00 3.86
404 405 4.410400 GCGGTGGGAGGTTGAGGG 62.410 72.222 0.00 0.00 0.00 4.30
405 406 2.606519 CGGTGGGAGGTTGAGGGA 60.607 66.667 0.00 0.00 0.00 4.20
406 407 2.221299 CGGTGGGAGGTTGAGGGAA 61.221 63.158 0.00 0.00 0.00 3.97
407 408 1.562672 CGGTGGGAGGTTGAGGGAAT 61.563 60.000 0.00 0.00 0.00 3.01
408 409 0.704664 GGTGGGAGGTTGAGGGAATT 59.295 55.000 0.00 0.00 0.00 2.17
409 410 1.077169 GGTGGGAGGTTGAGGGAATTT 59.923 52.381 0.00 0.00 0.00 1.82
410 411 2.447443 GTGGGAGGTTGAGGGAATTTC 58.553 52.381 0.00 0.00 0.00 2.17
411 412 1.004277 TGGGAGGTTGAGGGAATTTCG 59.996 52.381 0.00 0.00 0.00 3.46
412 413 1.682087 GGGAGGTTGAGGGAATTTCGG 60.682 57.143 0.00 0.00 0.00 4.30
413 414 1.280998 GGAGGTTGAGGGAATTTCGGA 59.719 52.381 0.00 0.00 0.00 4.55
414 415 2.633488 GAGGTTGAGGGAATTTCGGAG 58.367 52.381 0.00 0.00 0.00 4.63
415 416 1.095600 GGTTGAGGGAATTTCGGAGC 58.904 55.000 0.00 0.00 0.00 4.70
416 417 1.613255 GGTTGAGGGAATTTCGGAGCA 60.613 52.381 0.00 0.00 0.00 4.26
417 418 1.740025 GTTGAGGGAATTTCGGAGCAG 59.260 52.381 0.00 0.00 0.00 4.24
418 419 0.984230 TGAGGGAATTTCGGAGCAGT 59.016 50.000 0.00 0.00 0.00 4.40
419 420 1.351017 TGAGGGAATTTCGGAGCAGTT 59.649 47.619 0.00 0.00 0.00 3.16
420 421 1.740025 GAGGGAATTTCGGAGCAGTTG 59.260 52.381 0.00 0.00 0.00 3.16
421 422 0.171231 GGGAATTTCGGAGCAGTTGC 59.829 55.000 0.00 0.00 42.49 4.17
422 423 0.881118 GGAATTTCGGAGCAGTTGCA 59.119 50.000 6.90 0.00 45.16 4.08
423 424 1.135575 GGAATTTCGGAGCAGTTGCAG 60.136 52.381 6.90 0.00 45.16 4.41
424 425 0.242017 AATTTCGGAGCAGTTGCAGC 59.758 50.000 6.90 0.00 45.16 5.25
425 426 0.890542 ATTTCGGAGCAGTTGCAGCA 60.891 50.000 2.55 0.00 45.16 4.41
426 427 1.100463 TTTCGGAGCAGTTGCAGCAA 61.100 50.000 2.83 2.83 45.16 3.91
427 428 0.890542 TTCGGAGCAGTTGCAGCAAT 60.891 50.000 11.96 0.00 45.16 3.56
428 429 1.136147 CGGAGCAGTTGCAGCAATC 59.864 57.895 11.96 4.43 45.16 2.67
429 430 1.303799 CGGAGCAGTTGCAGCAATCT 61.304 55.000 11.96 9.03 45.16 2.40
430 431 0.170561 GGAGCAGTTGCAGCAATCTG 59.829 55.000 23.07 23.07 45.16 2.90
431 432 0.879765 GAGCAGTTGCAGCAATCTGT 59.120 50.000 25.61 17.71 45.16 3.41
432 433 0.879765 AGCAGTTGCAGCAATCTGTC 59.120 50.000 25.61 20.43 45.16 3.51
433 434 0.594602 GCAGTTGCAGCAATCTGTCA 59.405 50.000 25.61 0.00 42.29 3.58
434 435 1.001048 GCAGTTGCAGCAATCTGTCAA 60.001 47.619 25.61 0.00 42.29 3.18
435 436 2.921069 GCAGTTGCAGCAATCTGTCAAG 60.921 50.000 25.61 10.99 42.29 3.02
436 437 2.551032 CAGTTGCAGCAATCTGTCAAGA 59.449 45.455 20.80 0.00 42.29 3.02
437 438 3.190744 CAGTTGCAGCAATCTGTCAAGAT 59.809 43.478 20.80 0.00 45.48 2.40
438 439 3.190744 AGTTGCAGCAATCTGTCAAGATG 59.809 43.478 11.96 0.00 42.60 2.90
439 440 2.089201 TGCAGCAATCTGTCAAGATGG 58.911 47.619 0.00 0.00 42.60 3.51
440 441 2.290450 TGCAGCAATCTGTCAAGATGGA 60.290 45.455 0.00 0.00 42.60 3.41
441 442 2.355132 GCAGCAATCTGTCAAGATGGAG 59.645 50.000 0.00 0.00 42.60 3.86
442 443 2.355132 CAGCAATCTGTCAAGATGGAGC 59.645 50.000 0.00 0.00 42.60 4.70
443 444 2.026542 AGCAATCTGTCAAGATGGAGCA 60.027 45.455 9.34 0.00 42.60 4.26
444 445 2.355132 GCAATCTGTCAAGATGGAGCAG 59.645 50.000 0.00 0.00 42.60 4.24
445 446 3.607741 CAATCTGTCAAGATGGAGCAGT 58.392 45.455 0.00 0.00 42.60 4.40
446 447 3.996921 ATCTGTCAAGATGGAGCAGTT 57.003 42.857 0.00 0.00 41.80 3.16
447 448 5.181009 CAATCTGTCAAGATGGAGCAGTTA 58.819 41.667 0.00 0.00 42.60 2.24
448 449 5.627182 ATCTGTCAAGATGGAGCAGTTAT 57.373 39.130 0.00 0.00 41.80 1.89
449 450 6.737720 ATCTGTCAAGATGGAGCAGTTATA 57.262 37.500 0.00 0.00 41.80 0.98
450 451 6.737720 TCTGTCAAGATGGAGCAGTTATAT 57.262 37.500 0.00 0.00 0.00 0.86
451 452 7.129457 TCTGTCAAGATGGAGCAGTTATATT 57.871 36.000 0.00 0.00 0.00 1.28
452 453 7.568349 TCTGTCAAGATGGAGCAGTTATATTT 58.432 34.615 0.00 0.00 0.00 1.40
453 454 7.496920 TCTGTCAAGATGGAGCAGTTATATTTG 59.503 37.037 0.00 0.00 0.00 2.32
454 455 6.038603 TGTCAAGATGGAGCAGTTATATTTGC 59.961 38.462 1.74 1.74 40.57 3.68
461 462 2.719798 GCAGTTATATTTGCTGGTGCG 58.280 47.619 2.61 0.00 43.34 5.34
462 463 2.097466 GCAGTTATATTTGCTGGTGCGT 59.903 45.455 2.61 0.00 43.34 5.24
463 464 3.788797 GCAGTTATATTTGCTGGTGCGTC 60.789 47.826 2.61 0.00 43.34 5.19
464 465 3.373748 CAGTTATATTTGCTGGTGCGTCA 59.626 43.478 0.00 0.00 43.34 4.35
465 466 3.623060 AGTTATATTTGCTGGTGCGTCAG 59.377 43.478 2.18 2.18 43.34 3.51
472 473 3.143675 CTGGTGCGTCAGCTATTGT 57.856 52.632 9.72 0.00 45.42 2.71
473 474 1.002366 CTGGTGCGTCAGCTATTGTC 58.998 55.000 9.72 0.00 45.42 3.18
474 475 0.608130 TGGTGCGTCAGCTATTGTCT 59.392 50.000 9.72 0.00 45.42 3.41
475 476 1.822371 TGGTGCGTCAGCTATTGTCTA 59.178 47.619 9.72 0.00 45.42 2.59
476 477 2.194271 GGTGCGTCAGCTATTGTCTAC 58.806 52.381 0.00 0.00 45.42 2.59
477 478 1.846782 GTGCGTCAGCTATTGTCTACG 59.153 52.381 0.00 0.00 45.42 3.51
478 479 1.202256 TGCGTCAGCTATTGTCTACGG 60.202 52.381 0.00 0.00 45.42 4.02
479 480 1.065102 GCGTCAGCTATTGTCTACGGA 59.935 52.381 0.00 0.00 41.01 4.69
480 481 2.479049 GCGTCAGCTATTGTCTACGGAA 60.479 50.000 0.00 0.00 41.01 4.30
481 482 3.106672 CGTCAGCTATTGTCTACGGAAC 58.893 50.000 0.00 0.00 0.00 3.62
540 545 0.476771 GGGGGAGAAACACAAGGACA 59.523 55.000 0.00 0.00 0.00 4.02
578 583 1.078143 GCTTCGTGAAGAGGGGCAT 60.078 57.895 13.60 0.00 40.79 4.40
635 640 2.662596 CTGTAGAAGCCCGCACCA 59.337 61.111 0.00 0.00 0.00 4.17
883 889 3.632125 CCCCATCATTTACCCCCAAATCA 60.632 47.826 0.00 0.00 0.00 2.57
893 899 0.329261 CCCCAAATCAGCTCAGTCCA 59.671 55.000 0.00 0.00 0.00 4.02
906 912 0.907486 CAGTCCATCTCTCCTTGCCA 59.093 55.000 0.00 0.00 0.00 4.92
910 916 2.435805 GTCCATCTCTCCTTGCCACATA 59.564 50.000 0.00 0.00 0.00 2.29
1112 1118 4.592192 CGGCGATGCGGGAGATGT 62.592 66.667 0.00 0.00 0.00 3.06
1115 1121 1.815421 GCGATGCGGGAGATGTTGT 60.815 57.895 0.00 0.00 0.00 3.32
1127 1133 0.389426 GATGTTGTACCCGCAGTCGT 60.389 55.000 0.00 0.00 0.00 4.34
1216 1222 2.598099 TGGTGGTGACGGCGTCTA 60.598 61.111 36.17 21.98 33.15 2.59
1324 1330 7.609532 ACTTGTAGCAGATAAGCAGAAGATTTT 59.390 33.333 0.00 0.00 36.85 1.82
1327 1333 6.434018 AGCAGATAAGCAGAAGATTTTGTC 57.566 37.500 0.00 0.00 36.85 3.18
1528 1538 3.428045 GCATGTGCCCAGTTTATGTTCTC 60.428 47.826 0.00 0.00 34.31 2.87
1591 1601 3.314331 CCACGACAGGGGCTGAGT 61.314 66.667 0.00 0.00 31.86 3.41
1657 1667 8.383175 TGAGGTTTAAATCCTACTTTCTGTGAT 58.617 33.333 8.69 0.00 35.20 3.06
2096 2276 8.335356 CAACGGGTCACTGATATAGTTTAATTG 58.665 37.037 0.00 0.00 37.60 2.32
2097 2277 6.990349 ACGGGTCACTGATATAGTTTAATTGG 59.010 38.462 0.00 0.00 37.60 3.16
2414 2594 9.173021 TGGAATGTTATGTAGTTTATTCACTGG 57.827 33.333 0.00 0.00 0.00 4.00
2444 2624 9.474920 CATAAAGTTGTGTTGTTTGGTCATTAT 57.525 29.630 0.00 0.00 0.00 1.28
2454 2634 8.946085 TGTTGTTTGGTCATTATTTAGCTCTAG 58.054 33.333 0.00 0.00 0.00 2.43
2511 2691 9.749340 TCATATCTGAATGCTCATAAATGGAAT 57.251 29.630 0.00 0.00 0.00 3.01
2532 2712 8.642432 TGGAATTATTGTGTTGTTTGTCCATTA 58.358 29.630 0.00 0.00 0.00 1.90
2810 3195 7.703621 AGCAATTATCTGATGTTTGTGCATTAC 59.296 33.333 0.00 0.00 31.95 1.89
2811 3196 7.703621 GCAATTATCTGATGTTTGTGCATTACT 59.296 33.333 0.00 0.00 0.00 2.24
2812 3197 9.577110 CAATTATCTGATGTTTGTGCATTACTT 57.423 29.630 0.00 0.00 0.00 2.24
2815 3200 6.182039 TCTGATGTTTGTGCATTACTTAGC 57.818 37.500 0.00 0.00 0.00 3.09
2816 3201 5.939883 TCTGATGTTTGTGCATTACTTAGCT 59.060 36.000 0.00 0.00 0.00 3.32
2817 3202 5.941733 TGATGTTTGTGCATTACTTAGCTG 58.058 37.500 0.00 0.00 0.00 4.24
2818 3203 5.473162 TGATGTTTGTGCATTACTTAGCTGT 59.527 36.000 0.00 0.00 0.00 4.40
2819 3204 6.652900 TGATGTTTGTGCATTACTTAGCTGTA 59.347 34.615 0.00 0.00 0.00 2.74
2820 3205 6.869315 TGTTTGTGCATTACTTAGCTGTAA 57.131 33.333 0.00 0.00 36.92 2.41
2821 3206 7.265647 TGTTTGTGCATTACTTAGCTGTAAA 57.734 32.000 0.00 0.00 36.22 2.01
2822 3207 7.881142 TGTTTGTGCATTACTTAGCTGTAAAT 58.119 30.769 0.00 0.00 36.22 1.40
2823 3208 8.356657 TGTTTGTGCATTACTTAGCTGTAAATT 58.643 29.630 0.00 0.00 36.22 1.82
2824 3209 8.638565 GTTTGTGCATTACTTAGCTGTAAATTG 58.361 33.333 0.00 0.00 36.22 2.32
2825 3210 6.851609 TGTGCATTACTTAGCTGTAAATTGG 58.148 36.000 0.00 0.00 36.22 3.16
2826 3211 6.657117 TGTGCATTACTTAGCTGTAAATTGGA 59.343 34.615 0.00 0.00 36.22 3.53
2827 3212 7.339212 TGTGCATTACTTAGCTGTAAATTGGAT 59.661 33.333 0.00 0.00 36.22 3.41
2828 3213 8.836413 GTGCATTACTTAGCTGTAAATTGGATA 58.164 33.333 0.00 0.00 36.22 2.59
2829 3214 9.573166 TGCATTACTTAGCTGTAAATTGGATAT 57.427 29.630 0.00 0.00 36.22 1.63
2830 3215 9.831737 GCATTACTTAGCTGTAAATTGGATATG 57.168 33.333 0.00 0.00 36.22 1.78
2833 3218 9.899661 TTACTTAGCTGTAAATTGGATATGTGT 57.100 29.630 0.00 0.00 30.48 3.72
2834 3219 8.213518 ACTTAGCTGTAAATTGGATATGTGTG 57.786 34.615 0.00 0.00 0.00 3.82
2835 3220 8.046708 ACTTAGCTGTAAATTGGATATGTGTGA 58.953 33.333 0.00 0.00 0.00 3.58
2836 3221 8.978874 TTAGCTGTAAATTGGATATGTGTGAT 57.021 30.769 0.00 0.00 0.00 3.06
2837 3222 7.268199 AGCTGTAAATTGGATATGTGTGATG 57.732 36.000 0.00 0.00 0.00 3.07
2838 3223 6.830324 AGCTGTAAATTGGATATGTGTGATGT 59.170 34.615 0.00 0.00 0.00 3.06
2839 3224 7.340232 AGCTGTAAATTGGATATGTGTGATGTT 59.660 33.333 0.00 0.00 0.00 2.71
2840 3225 7.975616 GCTGTAAATTGGATATGTGTGATGTTT 59.024 33.333 0.00 0.00 0.00 2.83
2841 3226 9.859427 CTGTAAATTGGATATGTGTGATGTTTT 57.141 29.630 0.00 0.00 0.00 2.43
2884 3269 9.851686 TGAATGCATATAAAGGAACTATTCAGT 57.148 29.630 0.00 0.00 38.49 3.41
2916 3301 9.768215 TTCCATTAAATTCTTCTAAATGGGACT 57.232 29.630 11.37 0.00 44.35 3.85
2930 3315 9.802039 TCTAAATGGGACTATTTAGTTGTTTGT 57.198 29.630 20.43 0.00 44.88 2.83
2933 3318 8.927675 AATGGGACTATTTAGTTGTTTGTACA 57.072 30.769 0.00 0.00 36.50 2.90
2934 3319 9.528489 AATGGGACTATTTAGTTGTTTGTACAT 57.472 29.630 0.00 0.00 36.50 2.29
2935 3320 8.927675 TGGGACTATTTAGTTGTTTGTACATT 57.072 30.769 0.00 0.00 36.50 2.71
3147 4149 0.842635 CAAGATCAGGGAGAAGGGGG 59.157 60.000 0.00 0.00 0.00 5.40
3273 4279 2.997315 CCAGGAGTGGGAGCGACA 60.997 66.667 0.00 0.00 40.67 4.35
3691 4698 2.360801 GTGTGCAAAGAACCAGCCTTAA 59.639 45.455 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 2.676121 TTGGGCCAGCATTCCGTG 60.676 61.111 6.23 0.00 0.00 4.94
15 16 2.361610 CTTGGGCCAGCATTCCGT 60.362 61.111 6.23 0.00 0.00 4.69
16 17 3.830192 GCTTGGGCCAGCATTCCG 61.830 66.667 18.99 1.27 39.83 4.30
17 18 2.681064 TGCTTGGGCCAGCATTCC 60.681 61.111 21.60 4.00 45.14 3.01
34 35 4.814294 CTAAGACCGCGGCGCCTT 62.814 66.667 28.58 26.06 0.00 4.35
37 38 3.849953 CAACTAAGACCGCGGCGC 61.850 66.667 28.58 24.21 0.00 6.53
38 39 3.849953 GCAACTAAGACCGCGGCG 61.850 66.667 28.58 16.78 0.00 6.46
39 40 3.849953 CGCAACTAAGACCGCGGC 61.850 66.667 28.58 18.62 43.84 6.53
41 42 3.186047 CCCGCAACTAAGACCGCG 61.186 66.667 0.00 0.00 46.96 6.46
42 43 3.497031 GCCCGCAACTAAGACCGC 61.497 66.667 0.00 0.00 0.00 5.68
43 44 3.186047 CGCCCGCAACTAAGACCG 61.186 66.667 0.00 0.00 0.00 4.79
44 45 2.047560 ACGCCCGCAACTAAGACC 60.048 61.111 0.00 0.00 0.00 3.85
45 46 2.388232 CCACGCCCGCAACTAAGAC 61.388 63.158 0.00 0.00 0.00 3.01
46 47 2.047655 CCACGCCCGCAACTAAGA 60.048 61.111 0.00 0.00 0.00 2.10
47 48 3.799755 GCCACGCCCGCAACTAAG 61.800 66.667 0.00 0.00 0.00 2.18
59 60 4.680237 TCGAGTGCTTGGGCCACG 62.680 66.667 5.23 5.39 37.74 4.94
60 61 2.743928 CTCGAGTGCTTGGGCCAC 60.744 66.667 5.23 0.00 37.74 5.01
61 62 4.020617 CCTCGAGTGCTTGGGCCA 62.021 66.667 12.31 0.00 37.74 5.36
64 65 3.259633 AAGGCCTCGAGTGCTTGGG 62.260 63.158 20.47 3.40 0.00 4.12
65 66 2.037136 CAAGGCCTCGAGTGCTTGG 61.037 63.158 20.47 10.72 0.00 3.61
66 67 2.684843 GCAAGGCCTCGAGTGCTTG 61.685 63.158 18.11 20.40 34.13 4.01
67 68 2.359230 GCAAGGCCTCGAGTGCTT 60.359 61.111 18.11 13.37 34.13 3.91
68 69 4.749310 CGCAAGGCCTCGAGTGCT 62.749 66.667 21.72 7.70 34.79 4.40
90 91 3.782244 CTCTGCTTCACGCGTGCC 61.782 66.667 33.63 22.81 43.27 5.01
91 92 4.436448 GCTCTGCTTCACGCGTGC 62.436 66.667 33.63 22.89 43.27 5.34
92 93 3.037833 TGCTCTGCTTCACGCGTG 61.038 61.111 32.76 32.76 43.27 5.34
93 94 3.038417 GTGCTCTGCTTCACGCGT 61.038 61.111 5.58 5.58 43.27 6.01
94 95 3.008240 CTGTGCTCTGCTTCACGCG 62.008 63.158 3.53 3.53 43.27 6.01
95 96 2.858868 CTGTGCTCTGCTTCACGC 59.141 61.111 0.00 0.00 36.06 5.34
96 97 1.667191 AGCTGTGCTCTGCTTCACG 60.667 57.895 13.60 0.00 44.34 4.35
97 98 1.867615 CAGCTGTGCTCTGCTTCAC 59.132 57.895 16.31 0.00 44.34 3.18
98 99 4.373771 CAGCTGTGCTCTGCTTCA 57.626 55.556 16.31 0.00 44.34 3.02
113 114 6.970414 TGAAGAGATCAATCGGTGACGCAG 62.970 50.000 0.00 0.00 44.86 5.18
114 115 5.228748 TGAAGAGATCAATCGGTGACGCA 62.229 47.826 0.00 0.00 44.86 5.24
115 116 2.735444 TGAAGAGATCAATCGGTGACGC 60.735 50.000 0.00 0.00 44.86 5.19
116 117 3.150848 TGAAGAGATCAATCGGTGACG 57.849 47.619 0.00 0.00 46.01 4.35
117 118 4.748892 TCTTGAAGAGATCAATCGGTGAC 58.251 43.478 0.00 0.00 46.62 3.67
118 119 4.706962 TCTCTTGAAGAGATCAATCGGTGA 59.293 41.667 20.27 0.00 45.77 4.02
119 120 5.003692 TCTCTTGAAGAGATCAATCGGTG 57.996 43.478 20.27 0.00 45.77 4.94
131 132 3.234353 TGCCTTGAGACTCTCTTGAAGA 58.766 45.455 7.58 0.00 0.00 2.87
132 133 3.257873 TCTGCCTTGAGACTCTCTTGAAG 59.742 47.826 7.58 3.20 0.00 3.02
133 134 3.234353 TCTGCCTTGAGACTCTCTTGAA 58.766 45.455 7.58 0.00 0.00 2.69
134 135 2.824936 CTCTGCCTTGAGACTCTCTTGA 59.175 50.000 7.58 0.00 36.23 3.02
135 136 2.094078 CCTCTGCCTTGAGACTCTCTTG 60.094 54.545 7.58 0.69 36.23 3.02
136 137 2.178580 CCTCTGCCTTGAGACTCTCTT 58.821 52.381 7.58 0.00 36.23 2.85
137 138 1.357420 TCCTCTGCCTTGAGACTCTCT 59.643 52.381 7.58 0.00 36.23 3.10
138 139 1.846007 TCCTCTGCCTTGAGACTCTC 58.154 55.000 3.68 0.00 36.23 3.20
139 140 2.317371 TTCCTCTGCCTTGAGACTCT 57.683 50.000 3.68 0.00 36.23 3.24
140 141 3.625649 AATTCCTCTGCCTTGAGACTC 57.374 47.619 0.00 0.00 36.23 3.36
141 142 5.707066 ATAAATTCCTCTGCCTTGAGACT 57.293 39.130 0.00 0.00 36.23 3.24
142 143 7.275920 TCTAATAAATTCCTCTGCCTTGAGAC 58.724 38.462 0.00 0.00 36.23 3.36
143 144 7.437713 TCTAATAAATTCCTCTGCCTTGAGA 57.562 36.000 0.00 0.00 36.23 3.27
144 145 8.566260 CAATCTAATAAATTCCTCTGCCTTGAG 58.434 37.037 0.00 0.00 0.00 3.02
145 146 7.503566 CCAATCTAATAAATTCCTCTGCCTTGA 59.496 37.037 0.00 0.00 0.00 3.02
146 147 7.286316 ACCAATCTAATAAATTCCTCTGCCTTG 59.714 37.037 0.00 0.00 0.00 3.61
147 148 7.286316 CACCAATCTAATAAATTCCTCTGCCTT 59.714 37.037 0.00 0.00 0.00 4.35
148 149 6.774656 CACCAATCTAATAAATTCCTCTGCCT 59.225 38.462 0.00 0.00 0.00 4.75
149 150 6.015940 CCACCAATCTAATAAATTCCTCTGCC 60.016 42.308 0.00 0.00 0.00 4.85
150 151 6.547510 ACCACCAATCTAATAAATTCCTCTGC 59.452 38.462 0.00 0.00 0.00 4.26
151 152 9.627123 TTACCACCAATCTAATAAATTCCTCTG 57.373 33.333 0.00 0.00 0.00 3.35
152 153 9.628500 GTTACCACCAATCTAATAAATTCCTCT 57.372 33.333 0.00 0.00 0.00 3.69
153 154 9.628500 AGTTACCACCAATCTAATAAATTCCTC 57.372 33.333 0.00 0.00 0.00 3.71
154 155 9.628500 GAGTTACCACCAATCTAATAAATTCCT 57.372 33.333 0.00 0.00 0.00 3.36
155 156 9.628500 AGAGTTACCACCAATCTAATAAATTCC 57.372 33.333 0.00 0.00 0.00 3.01
157 158 9.975218 ACAGAGTTACCACCAATCTAATAAATT 57.025 29.630 0.00 0.00 0.00 1.82
158 159 9.396022 CACAGAGTTACCACCAATCTAATAAAT 57.604 33.333 0.00 0.00 0.00 1.40
159 160 7.827236 CCACAGAGTTACCACCAATCTAATAAA 59.173 37.037 0.00 0.00 0.00 1.40
160 161 7.335627 CCACAGAGTTACCACCAATCTAATAA 58.664 38.462 0.00 0.00 0.00 1.40
161 162 6.126883 CCCACAGAGTTACCACCAATCTAATA 60.127 42.308 0.00 0.00 0.00 0.98
162 163 5.339200 CCCACAGAGTTACCACCAATCTAAT 60.339 44.000 0.00 0.00 0.00 1.73
163 164 4.019681 CCCACAGAGTTACCACCAATCTAA 60.020 45.833 0.00 0.00 0.00 2.10
164 165 3.517901 CCCACAGAGTTACCACCAATCTA 59.482 47.826 0.00 0.00 0.00 1.98
165 166 2.305927 CCCACAGAGTTACCACCAATCT 59.694 50.000 0.00 0.00 0.00 2.40
166 167 2.711542 CCCACAGAGTTACCACCAATC 58.288 52.381 0.00 0.00 0.00 2.67
167 168 1.271926 GCCCACAGAGTTACCACCAAT 60.272 52.381 0.00 0.00 0.00 3.16
168 169 0.109723 GCCCACAGAGTTACCACCAA 59.890 55.000 0.00 0.00 0.00 3.67
169 170 1.758592 GCCCACAGAGTTACCACCA 59.241 57.895 0.00 0.00 0.00 4.17
170 171 1.375523 CGCCCACAGAGTTACCACC 60.376 63.158 0.00 0.00 0.00 4.61
171 172 0.249398 ATCGCCCACAGAGTTACCAC 59.751 55.000 0.00 0.00 0.00 4.16
172 173 0.981183 AATCGCCCACAGAGTTACCA 59.019 50.000 0.00 0.00 0.00 3.25
173 174 2.109425 AAATCGCCCACAGAGTTACC 57.891 50.000 0.00 0.00 0.00 2.85
174 175 3.365969 CCAAAAATCGCCCACAGAGTTAC 60.366 47.826 0.00 0.00 0.00 2.50
175 176 2.817258 CCAAAAATCGCCCACAGAGTTA 59.183 45.455 0.00 0.00 0.00 2.24
176 177 1.613437 CCAAAAATCGCCCACAGAGTT 59.387 47.619 0.00 0.00 0.00 3.01
177 178 1.202879 TCCAAAAATCGCCCACAGAGT 60.203 47.619 0.00 0.00 0.00 3.24
178 179 1.470098 CTCCAAAAATCGCCCACAGAG 59.530 52.381 0.00 0.00 0.00 3.35
179 180 1.533625 CTCCAAAAATCGCCCACAGA 58.466 50.000 0.00 0.00 0.00 3.41
180 181 0.109132 GCTCCAAAAATCGCCCACAG 60.109 55.000 0.00 0.00 0.00 3.66
181 182 0.539438 AGCTCCAAAAATCGCCCACA 60.539 50.000 0.00 0.00 0.00 4.17
182 183 1.401905 CTAGCTCCAAAAATCGCCCAC 59.598 52.381 0.00 0.00 0.00 4.61
183 184 1.681780 CCTAGCTCCAAAAATCGCCCA 60.682 52.381 0.00 0.00 0.00 5.36
184 185 1.025041 CCTAGCTCCAAAAATCGCCC 58.975 55.000 0.00 0.00 0.00 6.13
185 186 1.943340 CTCCTAGCTCCAAAAATCGCC 59.057 52.381 0.00 0.00 0.00 5.54
186 187 1.943340 CCTCCTAGCTCCAAAAATCGC 59.057 52.381 0.00 0.00 0.00 4.58
187 188 3.543680 TCCTCCTAGCTCCAAAAATCG 57.456 47.619 0.00 0.00 0.00 3.34
188 189 4.097135 GCTTTCCTCCTAGCTCCAAAAATC 59.903 45.833 0.00 0.00 34.57 2.17
189 190 4.019858 GCTTTCCTCCTAGCTCCAAAAAT 58.980 43.478 0.00 0.00 34.57 1.82
190 191 3.181434 TGCTTTCCTCCTAGCTCCAAAAA 60.181 43.478 0.00 0.00 38.22 1.94
191 192 2.375174 TGCTTTCCTCCTAGCTCCAAAA 59.625 45.455 0.00 0.00 38.22 2.44
192 193 1.985159 TGCTTTCCTCCTAGCTCCAAA 59.015 47.619 0.00 0.00 38.22 3.28
193 194 1.656587 TGCTTTCCTCCTAGCTCCAA 58.343 50.000 0.00 0.00 38.22 3.53
194 195 1.656587 TTGCTTTCCTCCTAGCTCCA 58.343 50.000 0.00 0.00 38.22 3.86
195 196 3.210227 GAATTGCTTTCCTCCTAGCTCC 58.790 50.000 0.00 0.00 38.22 4.70
196 197 3.878778 TGAATTGCTTTCCTCCTAGCTC 58.121 45.455 0.00 0.00 38.22 4.09
197 198 4.080129 TCATGAATTGCTTTCCTCCTAGCT 60.080 41.667 0.00 0.00 38.22 3.32
198 199 4.202441 TCATGAATTGCTTTCCTCCTAGC 58.798 43.478 0.00 0.00 37.89 3.42
199 200 5.298777 CCTTCATGAATTGCTTTCCTCCTAG 59.701 44.000 8.96 0.00 33.04 3.02
200 201 5.044919 TCCTTCATGAATTGCTTTCCTCCTA 60.045 40.000 8.96 0.00 33.04 2.94
201 202 4.021916 CCTTCATGAATTGCTTTCCTCCT 58.978 43.478 8.96 0.00 33.04 3.69
202 203 4.019174 TCCTTCATGAATTGCTTTCCTCC 58.981 43.478 8.96 0.00 33.04 4.30
203 204 5.649782 TTCCTTCATGAATTGCTTTCCTC 57.350 39.130 8.96 0.00 33.04 3.71
204 205 5.482878 ACATTCCTTCATGAATTGCTTTCCT 59.517 36.000 8.96 0.00 32.71 3.36
205 206 5.727434 ACATTCCTTCATGAATTGCTTTCC 58.273 37.500 8.96 0.00 32.71 3.13
206 207 7.385752 TGAAACATTCCTTCATGAATTGCTTTC 59.614 33.333 8.96 11.17 32.71 2.62
207 208 7.218614 TGAAACATTCCTTCATGAATTGCTTT 58.781 30.769 8.96 2.64 32.71 3.51
208 209 6.761312 TGAAACATTCCTTCATGAATTGCTT 58.239 32.000 8.96 2.93 32.71 3.91
209 210 6.349243 TGAAACATTCCTTCATGAATTGCT 57.651 33.333 8.96 0.00 32.71 3.91
210 211 7.172019 ACTTTGAAACATTCCTTCATGAATTGC 59.828 33.333 8.96 0.00 32.71 3.56
211 212 8.597662 ACTTTGAAACATTCCTTCATGAATTG 57.402 30.769 8.96 7.34 32.71 2.32
212 213 7.874528 GGACTTTGAAACATTCCTTCATGAATT 59.125 33.333 8.96 0.00 32.71 2.17
213 214 7.234166 AGGACTTTGAAACATTCCTTCATGAAT 59.766 33.333 8.96 0.00 32.47 2.57
214 215 6.550854 AGGACTTTGAAACATTCCTTCATGAA 59.449 34.615 8.12 8.12 32.47 2.57
215 216 6.070656 AGGACTTTGAAACATTCCTTCATGA 58.929 36.000 0.00 0.00 32.47 3.07
216 217 6.016024 TGAGGACTTTGAAACATTCCTTCATG 60.016 38.462 0.00 0.00 36.80 3.07
217 218 6.070656 TGAGGACTTTGAAACATTCCTTCAT 58.929 36.000 0.00 0.00 36.80 2.57
218 219 5.445069 TGAGGACTTTGAAACATTCCTTCA 58.555 37.500 0.00 0.00 36.80 3.02
219 220 5.532779 ACTGAGGACTTTGAAACATTCCTTC 59.467 40.000 0.00 0.00 36.80 3.46
220 221 5.449553 ACTGAGGACTTTGAAACATTCCTT 58.550 37.500 0.00 0.00 36.80 3.36
221 222 5.053978 ACTGAGGACTTTGAAACATTCCT 57.946 39.130 0.00 0.00 39.51 3.36
222 223 4.216472 GGACTGAGGACTTTGAAACATTCC 59.784 45.833 0.00 0.00 0.00 3.01
223 224 4.821805 TGGACTGAGGACTTTGAAACATTC 59.178 41.667 0.00 0.00 0.00 2.67
224 225 4.792068 TGGACTGAGGACTTTGAAACATT 58.208 39.130 0.00 0.00 0.00 2.71
225 226 4.437682 TGGACTGAGGACTTTGAAACAT 57.562 40.909 0.00 0.00 0.00 2.71
226 227 3.924114 TGGACTGAGGACTTTGAAACA 57.076 42.857 0.00 0.00 0.00 2.83
227 228 6.565999 CGTTAATGGACTGAGGACTTTGAAAC 60.566 42.308 0.00 0.00 0.00 2.78
228 229 5.468746 CGTTAATGGACTGAGGACTTTGAAA 59.531 40.000 0.00 0.00 0.00 2.69
229 230 4.994852 CGTTAATGGACTGAGGACTTTGAA 59.005 41.667 0.00 0.00 0.00 2.69
230 231 4.282449 TCGTTAATGGACTGAGGACTTTGA 59.718 41.667 0.00 0.00 0.00 2.69
231 232 4.566004 TCGTTAATGGACTGAGGACTTTG 58.434 43.478 0.00 0.00 0.00 2.77
232 233 4.884668 TCGTTAATGGACTGAGGACTTT 57.115 40.909 0.00 0.00 0.00 2.66
233 234 5.422214 AATCGTTAATGGACTGAGGACTT 57.578 39.130 0.00 0.00 0.00 3.01
234 235 5.046591 TGAAATCGTTAATGGACTGAGGACT 60.047 40.000 0.00 0.00 0.00 3.85
235 236 5.175859 TGAAATCGTTAATGGACTGAGGAC 58.824 41.667 0.00 0.00 0.00 3.85
236 237 5.414789 TGAAATCGTTAATGGACTGAGGA 57.585 39.130 0.00 0.00 0.00 3.71
237 238 7.519008 GCTTATGAAATCGTTAATGGACTGAGG 60.519 40.741 0.00 0.00 0.00 3.86
238 239 7.225538 AGCTTATGAAATCGTTAATGGACTGAG 59.774 37.037 0.00 0.00 0.00 3.35
239 240 7.047891 AGCTTATGAAATCGTTAATGGACTGA 58.952 34.615 0.00 0.00 0.00 3.41
240 241 7.251704 AGCTTATGAAATCGTTAATGGACTG 57.748 36.000 0.00 0.00 0.00 3.51
241 242 6.483640 GGAGCTTATGAAATCGTTAATGGACT 59.516 38.462 0.00 0.00 0.00 3.85
242 243 6.483640 AGGAGCTTATGAAATCGTTAATGGAC 59.516 38.462 0.00 0.00 0.00 4.02
243 244 6.591935 AGGAGCTTATGAAATCGTTAATGGA 58.408 36.000 0.00 0.00 0.00 3.41
244 245 6.867662 AGGAGCTTATGAAATCGTTAATGG 57.132 37.500 0.00 0.00 0.00 3.16
245 246 8.594881 AGTAGGAGCTTATGAAATCGTTAATG 57.405 34.615 0.00 0.00 0.00 1.90
281 282 9.224267 GCAGCTTTTTGAGGATAGATGATATTA 57.776 33.333 0.00 0.00 0.00 0.98
282 283 7.943447 AGCAGCTTTTTGAGGATAGATGATATT 59.057 33.333 0.00 0.00 0.00 1.28
283 284 7.460071 AGCAGCTTTTTGAGGATAGATGATAT 58.540 34.615 0.00 0.00 0.00 1.63
284 285 6.835174 AGCAGCTTTTTGAGGATAGATGATA 58.165 36.000 0.00 0.00 0.00 2.15
285 286 5.692928 AGCAGCTTTTTGAGGATAGATGAT 58.307 37.500 0.00 0.00 0.00 2.45
286 287 5.108187 AGCAGCTTTTTGAGGATAGATGA 57.892 39.130 0.00 0.00 0.00 2.92
287 288 5.503683 CGAAGCAGCTTTTTGAGGATAGATG 60.504 44.000 9.62 0.00 0.00 2.90
288 289 4.574013 CGAAGCAGCTTTTTGAGGATAGAT 59.426 41.667 9.62 0.00 0.00 1.98
289 290 3.935203 CGAAGCAGCTTTTTGAGGATAGA 59.065 43.478 9.62 0.00 0.00 1.98
290 291 3.064545 CCGAAGCAGCTTTTTGAGGATAG 59.935 47.826 9.62 0.00 0.00 2.08
291 292 3.009723 CCGAAGCAGCTTTTTGAGGATA 58.990 45.455 9.62 0.00 0.00 2.59
292 293 1.815003 CCGAAGCAGCTTTTTGAGGAT 59.185 47.619 9.62 0.00 0.00 3.24
293 294 1.238439 CCGAAGCAGCTTTTTGAGGA 58.762 50.000 9.62 0.00 0.00 3.71
294 295 0.387750 GCCGAAGCAGCTTTTTGAGG 60.388 55.000 9.62 9.25 39.53 3.86
295 296 0.387750 GGCCGAAGCAGCTTTTTGAG 60.388 55.000 9.62 0.00 42.56 3.02
296 297 1.106351 TGGCCGAAGCAGCTTTTTGA 61.106 50.000 9.62 0.00 42.56 2.69
297 298 0.249405 TTGGCCGAAGCAGCTTTTTG 60.249 50.000 9.62 2.60 42.56 2.44
298 299 0.681175 ATTGGCCGAAGCAGCTTTTT 59.319 45.000 9.62 0.00 42.56 1.94
299 300 0.037975 CATTGGCCGAAGCAGCTTTT 60.038 50.000 9.62 0.00 42.56 2.27
300 301 1.588082 CATTGGCCGAAGCAGCTTT 59.412 52.632 9.62 0.00 42.56 3.51
301 302 2.998279 GCATTGGCCGAAGCAGCTT 61.998 57.895 15.44 7.60 42.56 3.74
302 303 3.446570 GCATTGGCCGAAGCAGCT 61.447 61.111 15.44 0.00 42.56 4.24
303 304 2.567564 ATTGCATTGGCCGAAGCAGC 62.568 55.000 21.48 12.14 42.56 5.25
304 305 0.108520 AATTGCATTGGCCGAAGCAG 60.109 50.000 21.48 2.14 42.56 4.24
305 306 1.180907 TAATTGCATTGGCCGAAGCA 58.819 45.000 18.97 18.97 42.56 3.91
306 307 2.514205 ATAATTGCATTGGCCGAAGC 57.486 45.000 13.50 13.50 40.13 3.86
307 308 3.004629 TGCTATAATTGCATTGGCCGAAG 59.995 43.478 0.00 0.00 40.13 3.79
308 309 2.954989 TGCTATAATTGCATTGGCCGAA 59.045 40.909 0.00 0.00 40.13 4.30
309 310 2.580962 TGCTATAATTGCATTGGCCGA 58.419 42.857 0.00 0.00 40.13 5.54
310 311 3.004629 TCTTGCTATAATTGCATTGGCCG 59.995 43.478 0.00 0.00 40.34 6.13
311 312 4.301628 GTCTTGCTATAATTGCATTGGCC 58.698 43.478 0.00 0.00 40.34 5.36
312 313 4.202141 TGGTCTTGCTATAATTGCATTGGC 60.202 41.667 0.00 0.00 40.34 4.52
313 314 5.284079 GTGGTCTTGCTATAATTGCATTGG 58.716 41.667 0.00 0.00 40.34 3.16
314 315 4.971830 CGTGGTCTTGCTATAATTGCATTG 59.028 41.667 0.00 0.00 40.34 2.82
315 316 4.881273 TCGTGGTCTTGCTATAATTGCATT 59.119 37.500 0.00 0.00 40.34 3.56
316 317 4.273480 GTCGTGGTCTTGCTATAATTGCAT 59.727 41.667 0.00 0.00 40.34 3.96
317 318 3.621268 GTCGTGGTCTTGCTATAATTGCA 59.379 43.478 0.00 0.00 38.80 4.08
318 319 3.302480 CGTCGTGGTCTTGCTATAATTGC 60.302 47.826 0.00 0.00 0.00 3.56
319 320 4.109766 TCGTCGTGGTCTTGCTATAATTG 58.890 43.478 0.00 0.00 0.00 2.32
320 321 4.380841 TCGTCGTGGTCTTGCTATAATT 57.619 40.909 0.00 0.00 0.00 1.40
321 322 4.299155 CATCGTCGTGGTCTTGCTATAAT 58.701 43.478 0.00 0.00 0.00 1.28
322 323 3.490249 CCATCGTCGTGGTCTTGCTATAA 60.490 47.826 5.89 0.00 34.46 0.98
323 324 2.034179 CCATCGTCGTGGTCTTGCTATA 59.966 50.000 5.89 0.00 34.46 1.31
324 325 1.202417 CCATCGTCGTGGTCTTGCTAT 60.202 52.381 5.89 0.00 34.46 2.97
325 326 0.172578 CCATCGTCGTGGTCTTGCTA 59.827 55.000 5.89 0.00 34.46 3.49
326 327 1.079819 CCATCGTCGTGGTCTTGCT 60.080 57.895 5.89 0.00 34.46 3.91
327 328 2.740714 GCCATCGTCGTGGTCTTGC 61.741 63.158 13.14 0.00 41.47 4.01
328 329 2.100631 GGCCATCGTCGTGGTCTTG 61.101 63.158 0.00 0.00 40.74 3.02
329 330 2.264794 GGCCATCGTCGTGGTCTT 59.735 61.111 0.00 0.00 40.74 3.01
330 331 4.129737 CGGCCATCGTCGTGGTCT 62.130 66.667 2.24 0.00 41.76 3.85
337 338 4.899239 CCAGAGGCGGCCATCGTC 62.899 72.222 23.09 9.95 45.07 4.20
347 348 2.109126 GTGATTGTCCGCCAGAGGC 61.109 63.158 0.00 0.00 46.75 4.70
348 349 1.811266 CGTGATTGTCCGCCAGAGG 60.811 63.158 0.00 0.00 0.00 3.69
349 350 2.456119 GCGTGATTGTCCGCCAGAG 61.456 63.158 0.00 0.00 43.96 3.35
350 351 2.434185 GCGTGATTGTCCGCCAGA 60.434 61.111 0.00 0.00 43.96 3.86
355 356 1.198867 TGATTTTGGCGTGATTGTCCG 59.801 47.619 0.00 0.00 0.00 4.79
356 357 2.986479 GTTGATTTTGGCGTGATTGTCC 59.014 45.455 0.00 0.00 0.00 4.02
357 358 3.425193 GTGTTGATTTTGGCGTGATTGTC 59.575 43.478 0.00 0.00 0.00 3.18
358 359 3.380142 GTGTTGATTTTGGCGTGATTGT 58.620 40.909 0.00 0.00 0.00 2.71
359 360 2.730928 GGTGTTGATTTTGGCGTGATTG 59.269 45.455 0.00 0.00 0.00 2.67
360 361 2.606795 CGGTGTTGATTTTGGCGTGATT 60.607 45.455 0.00 0.00 0.00 2.57
361 362 1.068610 CGGTGTTGATTTTGGCGTGAT 60.069 47.619 0.00 0.00 0.00 3.06
362 363 0.309302 CGGTGTTGATTTTGGCGTGA 59.691 50.000 0.00 0.00 0.00 4.35
363 364 0.309302 TCGGTGTTGATTTTGGCGTG 59.691 50.000 0.00 0.00 0.00 5.34
364 365 1.068610 CATCGGTGTTGATTTTGGCGT 60.069 47.619 0.00 0.00 0.00 5.68
365 366 1.068610 ACATCGGTGTTGATTTTGGCG 60.069 47.619 0.00 0.00 34.01 5.69
366 367 2.723124 ACATCGGTGTTGATTTTGGC 57.277 45.000 0.00 0.00 34.01 4.52
380 381 2.819595 CCTCCCACCGCAACATCG 60.820 66.667 0.00 0.00 0.00 3.84
381 382 1.303317 AACCTCCCACCGCAACATC 60.303 57.895 0.00 0.00 0.00 3.06
382 383 1.603455 CAACCTCCCACCGCAACAT 60.603 57.895 0.00 0.00 0.00 2.71
383 384 2.203280 CAACCTCCCACCGCAACA 60.203 61.111 0.00 0.00 0.00 3.33
384 385 1.966451 CTCAACCTCCCACCGCAAC 60.966 63.158 0.00 0.00 0.00 4.17
385 386 2.429930 CTCAACCTCCCACCGCAA 59.570 61.111 0.00 0.00 0.00 4.85
386 387 3.636231 CCTCAACCTCCCACCGCA 61.636 66.667 0.00 0.00 0.00 5.69
387 388 4.410400 CCCTCAACCTCCCACCGC 62.410 72.222 0.00 0.00 0.00 5.68
388 389 1.562672 ATTCCCTCAACCTCCCACCG 61.563 60.000 0.00 0.00 0.00 4.94
389 390 0.704664 AATTCCCTCAACCTCCCACC 59.295 55.000 0.00 0.00 0.00 4.61
390 391 2.447443 GAAATTCCCTCAACCTCCCAC 58.553 52.381 0.00 0.00 0.00 4.61
391 392 1.004277 CGAAATTCCCTCAACCTCCCA 59.996 52.381 0.00 0.00 0.00 4.37
392 393 1.682087 CCGAAATTCCCTCAACCTCCC 60.682 57.143 0.00 0.00 0.00 4.30
393 394 1.280998 TCCGAAATTCCCTCAACCTCC 59.719 52.381 0.00 0.00 0.00 4.30
394 395 2.633488 CTCCGAAATTCCCTCAACCTC 58.367 52.381 0.00 0.00 0.00 3.85
395 396 1.340114 GCTCCGAAATTCCCTCAACCT 60.340 52.381 0.00 0.00 0.00 3.50
396 397 1.095600 GCTCCGAAATTCCCTCAACC 58.904 55.000 0.00 0.00 0.00 3.77
397 398 1.740025 CTGCTCCGAAATTCCCTCAAC 59.260 52.381 0.00 0.00 0.00 3.18
398 399 1.351017 ACTGCTCCGAAATTCCCTCAA 59.649 47.619 0.00 0.00 0.00 3.02
399 400 0.984230 ACTGCTCCGAAATTCCCTCA 59.016 50.000 0.00 0.00 0.00 3.86
400 401 1.740025 CAACTGCTCCGAAATTCCCTC 59.260 52.381 0.00 0.00 0.00 4.30
401 402 1.826385 CAACTGCTCCGAAATTCCCT 58.174 50.000 0.00 0.00 0.00 4.20
402 403 0.171231 GCAACTGCTCCGAAATTCCC 59.829 55.000 0.00 0.00 38.21 3.97
403 404 0.881118 TGCAACTGCTCCGAAATTCC 59.119 50.000 2.95 0.00 42.66 3.01
404 405 1.730446 GCTGCAACTGCTCCGAAATTC 60.730 52.381 2.95 0.00 42.66 2.17
405 406 0.242017 GCTGCAACTGCTCCGAAATT 59.758 50.000 2.95 0.00 42.66 1.82
406 407 0.890542 TGCTGCAACTGCTCCGAAAT 60.891 50.000 0.00 0.00 42.66 2.17
407 408 1.100463 TTGCTGCAACTGCTCCGAAA 61.100 50.000 11.69 0.00 42.66 3.46
408 409 0.890542 ATTGCTGCAACTGCTCCGAA 60.891 50.000 18.51 0.00 42.66 4.30
409 410 1.300971 GATTGCTGCAACTGCTCCGA 61.301 55.000 18.51 0.00 42.66 4.55
410 411 1.136147 GATTGCTGCAACTGCTCCG 59.864 57.895 18.51 0.00 42.66 4.63
411 412 0.170561 CAGATTGCTGCAACTGCTCC 59.829 55.000 18.51 3.27 42.66 4.70
412 413 0.879765 ACAGATTGCTGCAACTGCTC 59.120 50.000 28.48 19.36 46.26 4.26
413 414 0.879765 GACAGATTGCTGCAACTGCT 59.120 50.000 28.48 19.79 46.26 4.24
414 415 0.594602 TGACAGATTGCTGCAACTGC 59.405 50.000 28.48 23.51 46.26 4.40
415 416 2.551032 TCTTGACAGATTGCTGCAACTG 59.449 45.455 27.65 27.65 46.26 3.16
416 417 2.854963 TCTTGACAGATTGCTGCAACT 58.145 42.857 18.51 13.60 46.26 3.16
417 418 3.499048 CATCTTGACAGATTGCTGCAAC 58.501 45.455 18.51 11.54 46.26 4.17
418 419 2.490509 CCATCTTGACAGATTGCTGCAA 59.509 45.455 18.43 18.43 46.26 4.08
419 420 2.089201 CCATCTTGACAGATTGCTGCA 58.911 47.619 0.00 0.00 46.26 4.41
420 421 2.355132 CTCCATCTTGACAGATTGCTGC 59.645 50.000 0.00 0.00 46.26 5.25
422 423 2.026542 TGCTCCATCTTGACAGATTGCT 60.027 45.455 0.00 0.00 37.71 3.91
423 424 2.355132 CTGCTCCATCTTGACAGATTGC 59.645 50.000 0.00 0.00 37.71 3.56
424 425 3.607741 ACTGCTCCATCTTGACAGATTG 58.392 45.455 0.00 0.00 37.71 2.67
425 426 3.996921 ACTGCTCCATCTTGACAGATT 57.003 42.857 0.00 0.00 37.71 2.40
426 427 3.996921 AACTGCTCCATCTTGACAGAT 57.003 42.857 0.00 0.00 40.79 2.90
427 428 6.737720 ATATAACTGCTCCATCTTGACAGA 57.262 37.500 0.00 0.00 32.67 3.41
428 429 7.637229 CAAATATAACTGCTCCATCTTGACAG 58.363 38.462 0.00 0.00 0.00 3.51
429 430 6.038603 GCAAATATAACTGCTCCATCTTGACA 59.961 38.462 2.88 0.00 35.62 3.58
430 431 6.261826 AGCAAATATAACTGCTCCATCTTGAC 59.738 38.462 6.18 0.00 45.79 3.18
431 432 6.261603 CAGCAAATATAACTGCTCCATCTTGA 59.738 38.462 8.56 0.00 45.79 3.02
432 433 6.436261 CAGCAAATATAACTGCTCCATCTTG 58.564 40.000 8.56 0.00 45.79 3.02
433 434 5.533903 CCAGCAAATATAACTGCTCCATCTT 59.466 40.000 8.56 0.00 45.79 2.40
434 435 5.068636 CCAGCAAATATAACTGCTCCATCT 58.931 41.667 8.56 0.00 45.79 2.90
435 436 4.823989 ACCAGCAAATATAACTGCTCCATC 59.176 41.667 8.56 0.00 45.79 3.51
436 437 4.581824 CACCAGCAAATATAACTGCTCCAT 59.418 41.667 8.56 0.00 45.79 3.41
437 438 3.947196 CACCAGCAAATATAACTGCTCCA 59.053 43.478 8.56 0.00 45.79 3.86
438 439 3.243201 GCACCAGCAAATATAACTGCTCC 60.243 47.826 8.56 0.00 45.79 4.70
439 440 3.546815 CGCACCAGCAAATATAACTGCTC 60.547 47.826 8.56 0.00 45.79 4.26
441 442 2.097466 ACGCACCAGCAAATATAACTGC 59.903 45.455 2.00 2.00 42.27 4.40
442 443 3.373748 TGACGCACCAGCAAATATAACTG 59.626 43.478 0.00 0.00 42.27 3.16
443 444 3.605634 TGACGCACCAGCAAATATAACT 58.394 40.909 0.00 0.00 42.27 2.24
444 445 3.940303 CTGACGCACCAGCAAATATAAC 58.060 45.455 0.00 0.00 42.27 1.89
454 455 1.002366 GACAATAGCTGACGCACCAG 58.998 55.000 0.00 0.00 39.10 4.00
455 456 0.608130 AGACAATAGCTGACGCACCA 59.392 50.000 0.00 0.00 39.10 4.17
456 457 2.194271 GTAGACAATAGCTGACGCACC 58.806 52.381 0.00 0.00 39.10 5.01
457 458 1.846782 CGTAGACAATAGCTGACGCAC 59.153 52.381 0.00 0.00 39.10 5.34
458 459 1.202256 CCGTAGACAATAGCTGACGCA 60.202 52.381 0.00 0.00 39.10 5.24
459 460 1.065102 TCCGTAGACAATAGCTGACGC 59.935 52.381 0.00 0.00 0.00 5.19
460 461 3.106672 GTTCCGTAGACAATAGCTGACG 58.893 50.000 0.00 0.00 0.00 4.35
461 462 3.106672 CGTTCCGTAGACAATAGCTGAC 58.893 50.000 0.00 0.00 0.00 3.51
462 463 2.479049 GCGTTCCGTAGACAATAGCTGA 60.479 50.000 0.00 0.00 0.00 4.26
463 464 1.852895 GCGTTCCGTAGACAATAGCTG 59.147 52.381 0.00 0.00 0.00 4.24
464 465 1.533338 CGCGTTCCGTAGACAATAGCT 60.533 52.381 0.00 0.00 0.00 3.32
465 466 0.844503 CGCGTTCCGTAGACAATAGC 59.155 55.000 0.00 0.00 0.00 2.97
476 477 2.470286 GAGCAGAAACGCGTTCCG 59.530 61.111 26.77 17.03 44.21 4.30
477 478 2.861006 GGAGCAGAAACGCGTTCC 59.139 61.111 26.77 17.42 36.86 3.62
478 479 2.470286 CGGAGCAGAAACGCGTTC 59.530 61.111 26.77 17.97 36.85 3.95
479 480 3.041940 CCGGAGCAGAAACGCGTT 61.042 61.111 20.79 20.79 36.85 4.84
480 481 4.295119 ACCGGAGCAGAAACGCGT 62.295 61.111 9.46 5.58 36.85 6.01
481 482 3.777925 CACCGGAGCAGAAACGCG 61.778 66.667 9.46 3.53 36.85 6.01
516 521 1.701031 TTGTGTTTCTCCCCCTCGCA 61.701 55.000 0.00 0.00 0.00 5.10
540 545 4.333690 AGCATTTTTGACAGATCTCAGCT 58.666 39.130 0.00 0.00 0.00 4.24
578 583 3.194861 CTCGGGCATAAAAAGACGATCA 58.805 45.455 0.00 0.00 0.00 2.92
866 872 3.011144 TGAGCTGATTTGGGGGTAAATGA 59.989 43.478 0.00 0.00 30.78 2.57
883 889 2.109774 CAAGGAGAGATGGACTGAGCT 58.890 52.381 0.00 0.00 0.00 4.09
893 899 3.640967 GAGACTATGTGGCAAGGAGAGAT 59.359 47.826 0.00 0.00 0.00 2.75
906 912 0.927767 AGACGAGGGGGAGACTATGT 59.072 55.000 0.00 0.00 0.00 2.29
910 916 1.585651 ATGGAGACGAGGGGGAGACT 61.586 60.000 0.00 0.00 0.00 3.24
949 955 2.909965 GCGGTGGGGTTGAGCAAA 60.910 61.111 0.00 0.00 0.00 3.68
1100 1106 0.180406 GGGTACAACATCTCCCGCAT 59.820 55.000 0.00 0.00 0.00 4.73
1112 1118 1.301087 CCAACGACTGCGGGTACAA 60.301 57.895 0.00 0.00 43.17 2.41
1115 1121 1.514087 GATCCAACGACTGCGGGTA 59.486 57.895 0.00 0.00 43.17 3.69
1216 1222 1.198713 CCTACATCCAGTGAGCCACT 58.801 55.000 2.38 2.38 46.51 4.00
1259 1265 1.670811 GAAGCATTACCACATCCACCG 59.329 52.381 0.00 0.00 0.00 4.94
1346 1353 2.195922 GCCGCAATCAATCACAAATCC 58.804 47.619 0.00 0.00 0.00 3.01
1484 1494 6.653020 TGCGGCAATCCAGATTCTAATATAT 58.347 36.000 0.00 0.00 0.00 0.86
2073 2084 7.214381 TCCAATTAAACTATATCAGTGACCCG 58.786 38.462 0.00 0.00 37.63 5.28
2096 2276 7.939784 AACCTAAAATGATACTTTGACCTCC 57.060 36.000 0.00 0.00 0.00 4.30
2136 2316 5.355071 CAGTATGCAAAGGTCAAGCAATCTA 59.645 40.000 0.00 0.00 42.15 1.98
2414 2594 8.132362 TGACCAAACAACACAACTTTATGATAC 58.868 33.333 0.00 0.00 0.00 2.24
2444 2624 8.651389 ACTACAAATATGCCATCTAGAGCTAAA 58.349 33.333 0.00 0.00 0.00 1.85
2454 2634 8.158169 TGATCAAAGACTACAAATATGCCATC 57.842 34.615 0.00 0.00 0.00 3.51
2784 3169 5.648178 TGCACAAACATCAGATAATTGCT 57.352 34.783 7.09 0.00 0.00 3.91
2810 3195 8.437360 TCACACATATCCAATTTACAGCTAAG 57.563 34.615 0.00 0.00 0.00 2.18
2811 3196 8.839343 CATCACACATATCCAATTTACAGCTAA 58.161 33.333 0.00 0.00 0.00 3.09
2812 3197 7.992608 ACATCACACATATCCAATTTACAGCTA 59.007 33.333 0.00 0.00 0.00 3.32
2813 3198 6.830324 ACATCACACATATCCAATTTACAGCT 59.170 34.615 0.00 0.00 0.00 4.24
2814 3199 7.031226 ACATCACACATATCCAATTTACAGC 57.969 36.000 0.00 0.00 0.00 4.40
2815 3200 9.859427 AAAACATCACACATATCCAATTTACAG 57.141 29.630 0.00 0.00 0.00 2.74
2858 3243 9.851686 ACTGAATAGTTCCTTTATATGCATTCA 57.148 29.630 3.54 0.00 31.66 2.57
2890 3275 9.768215 AGTCCCATTTAGAAGAATTTAATGGAA 57.232 29.630 12.43 0.00 40.85 3.53
2904 3289 9.802039 ACAAACAACTAAATAGTCCCATTTAGA 57.198 29.630 17.92 0.00 45.36 2.10
2907 3292 9.357161 TGTACAAACAACTAAATAGTCCCATTT 57.643 29.630 0.00 0.00 34.99 2.32
2908 3293 8.927675 TGTACAAACAACTAAATAGTCCCATT 57.072 30.769 0.00 0.00 34.99 3.16
2909 3294 9.528489 AATGTACAAACAACTAAATAGTCCCAT 57.472 29.630 0.00 0.00 39.58 4.00
2910 3295 8.927675 AATGTACAAACAACTAAATAGTCCCA 57.072 30.769 0.00 0.00 39.58 4.37
2957 3342 9.689976 CTGGAATGTAATGAACAAACAAACATA 57.310 29.630 0.00 0.00 42.70 2.29
2958 3343 8.203485 ACTGGAATGTAATGAACAAACAAACAT 58.797 29.630 0.00 0.00 42.70 2.71
2959 3344 7.551585 ACTGGAATGTAATGAACAAACAAACA 58.448 30.769 0.00 0.00 42.70 2.83
2960 3345 9.522804 TTACTGGAATGTAATGAACAAACAAAC 57.477 29.630 0.00 0.00 42.70 2.93
3147 4149 1.403780 CCACTTGTAGTACACCGCCTC 60.404 57.143 1.43 0.00 0.00 4.70
3154 4156 2.051692 ACTTGCCCCACTTGTAGTACA 58.948 47.619 0.00 0.00 0.00 2.90
3273 4279 1.210538 TGCTCTGCCCTGATCTTCAT 58.789 50.000 0.00 0.00 0.00 2.57
3525 4532 8.200792 CCTGCTTCTAGACAGTTGATATACTTT 58.799 37.037 8.97 0.00 31.76 2.66
3612 4619 5.550290 TGTCTCATCAGTGAAGCAACATTA 58.450 37.500 0.00 0.00 33.05 1.90
3889 4899 9.961265 CAATCATGCTAACTTATGAACATTGAT 57.039 29.630 0.00 0.00 36.93 2.57
4052 5062 7.634671 ATCATGCTCACTTATGAACATTGAA 57.365 32.000 0.00 0.00 39.19 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.