Multiple sequence alignment - TraesCS7B01G061100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G061100 chr7B 100.000 2963 0 0 1 2963 63767155 63770117 0.000000e+00 5472
1 TraesCS7B01G061100 chr7B 97.318 261 7 0 198 458 700725135 700725395 7.540000e-121 444
2 TraesCS7B01G061100 chr7D 91.946 1763 81 29 457 2201 105209791 105211510 0.000000e+00 2412
3 TraesCS7B01G061100 chr7D 95.259 232 9 1 2699 2930 105219160 105219389 1.680000e-97 366
4 TraesCS7B01G061100 chr7D 84.932 292 29 10 2252 2538 105211518 105211799 6.250000e-72 281
5 TraesCS7B01G061100 chr7A 91.812 1380 72 15 853 2221 109825030 109826379 0.000000e+00 1884
6 TraesCS7B01G061100 chr7A 93.077 260 17 1 455 714 109824478 109824736 2.160000e-101 379
7 TraesCS7B01G061100 chr7A 86.957 207 22 2 2741 2947 109827144 109827345 8.260000e-56 228
8 TraesCS7B01G061100 chr1B 98.876 267 2 1 193 459 118395600 118395865 2.670000e-130 475
9 TraesCS7B01G061100 chr1B 98.127 267 4 1 193 459 117851831 117851566 5.780000e-127 464
10 TraesCS7B01G061100 chr1B 97.358 265 7 0 196 460 502627832 502627568 4.500000e-123 451
11 TraesCS7B01G061100 chr4A 97.701 261 6 0 198 458 733243073 733243333 1.620000e-122 449
12 TraesCS7B01G061100 chr4B 97.328 262 7 0 197 458 60329007 60329268 2.100000e-121 446
13 TraesCS7B01G061100 chr4B 96.981 265 8 0 194 458 588434788 588434524 2.100000e-121 446
14 TraesCS7B01G061100 chr5B 96.617 266 9 0 193 458 93825496 93825231 2.710000e-120 442
15 TraesCS7B01G061100 chr3A 95.588 272 11 1 195 466 726389295 726389565 4.540000e-118 435


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G061100 chr7B 63767155 63770117 2962 False 5472.000000 5472 100.000000 1 2963 1 chr7B.!!$F1 2962
1 TraesCS7B01G061100 chr7D 105209791 105211799 2008 False 1346.500000 2412 88.439000 457 2538 2 chr7D.!!$F2 2081
2 TraesCS7B01G061100 chr7A 109824478 109827345 2867 False 830.333333 1884 90.615333 455 2947 3 chr7A.!!$F1 2492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
153 154 0.033920 CGGGCTGTGCATAGCTCATA 59.966 55.0 31.34 0.0 44.54 2.15 F
840 1038 0.040246 CGTAAGCTAGCCGCCTAGAC 60.040 60.0 12.13 0.0 43.07 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1567 1771 1.074248 GGACGTTGGTGGGGAACAT 59.926 57.895 0.0 0.0 0.00 2.71 R
2597 2983 0.034059 AAGGCACTGGAACTCGTGAG 59.966 55.000 0.0 0.0 40.86 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.618287 TGTCCATCAACTAGTGAAAAACAG 57.382 37.500 0.00 0.00 40.50 3.16
24 25 6.119536 TGTCCATCAACTAGTGAAAAACAGT 58.880 36.000 0.00 0.00 40.50 3.55
25 26 6.038161 TGTCCATCAACTAGTGAAAAACAGTG 59.962 38.462 0.00 0.00 40.50 3.66
26 27 6.038271 GTCCATCAACTAGTGAAAAACAGTGT 59.962 38.462 0.00 0.00 40.50 3.55
27 28 7.225931 GTCCATCAACTAGTGAAAAACAGTGTA 59.774 37.037 0.00 0.00 40.50 2.90
28 29 7.225931 TCCATCAACTAGTGAAAAACAGTGTAC 59.774 37.037 0.00 0.00 40.50 2.90
29 30 7.226720 CCATCAACTAGTGAAAAACAGTGTACT 59.773 37.037 0.00 0.00 40.50 2.73
30 31 9.256477 CATCAACTAGTGAAAAACAGTGTACTA 57.744 33.333 0.00 0.00 40.50 1.82
31 32 9.826574 ATCAACTAGTGAAAAACAGTGTACTAA 57.173 29.630 0.00 0.00 40.50 2.24
32 33 9.656040 TCAACTAGTGAAAAACAGTGTACTAAA 57.344 29.630 0.00 0.00 31.51 1.85
33 34 9.698617 CAACTAGTGAAAAACAGTGTACTAAAC 57.301 33.333 0.00 0.00 33.78 2.01
34 35 9.439500 AACTAGTGAAAAACAGTGTACTAAACA 57.561 29.630 0.00 0.00 35.06 2.83
35 36 9.609346 ACTAGTGAAAAACAGTGTACTAAACAT 57.391 29.630 0.00 0.00 41.10 2.71
38 39 9.783256 AGTGAAAAACAGTGTACTAAACATTTC 57.217 29.630 0.00 0.32 41.10 2.17
39 40 9.783256 GTGAAAAACAGTGTACTAAACATTTCT 57.217 29.630 0.00 0.00 41.10 2.52
46 47 9.826574 ACAGTGTACTAAACATTTCTAGAAACA 57.173 29.630 19.94 8.25 41.10 2.83
66 67 7.565323 AAACATTTTTCTTAATTGGCAAGCA 57.435 28.000 5.96 0.00 0.00 3.91
67 68 7.748691 AACATTTTTCTTAATTGGCAAGCAT 57.251 28.000 5.96 0.00 0.00 3.79
68 69 7.748691 ACATTTTTCTTAATTGGCAAGCATT 57.251 28.000 5.96 0.00 0.00 3.56
69 70 8.168790 ACATTTTTCTTAATTGGCAAGCATTT 57.831 26.923 5.96 0.00 0.00 2.32
70 71 8.631797 ACATTTTTCTTAATTGGCAAGCATTTT 58.368 25.926 5.96 0.00 0.00 1.82
111 112 7.448748 AAAAACATAAGATTCGTTACCAGCT 57.551 32.000 0.00 0.00 0.00 4.24
112 113 7.448748 AAAACATAAGATTCGTTACCAGCTT 57.551 32.000 0.00 0.00 0.00 3.74
113 114 6.422776 AACATAAGATTCGTTACCAGCTTG 57.577 37.500 0.00 0.00 0.00 4.01
114 115 5.730550 ACATAAGATTCGTTACCAGCTTGA 58.269 37.500 0.00 0.00 0.00 3.02
115 116 5.812642 ACATAAGATTCGTTACCAGCTTGAG 59.187 40.000 0.00 0.00 0.00 3.02
116 117 3.963428 AGATTCGTTACCAGCTTGAGT 57.037 42.857 0.00 0.00 0.00 3.41
117 118 4.273148 AGATTCGTTACCAGCTTGAGTT 57.727 40.909 0.00 0.00 0.00 3.01
118 119 4.246458 AGATTCGTTACCAGCTTGAGTTC 58.754 43.478 0.00 0.00 0.00 3.01
119 120 3.746045 TTCGTTACCAGCTTGAGTTCT 57.254 42.857 0.00 0.00 0.00 3.01
120 121 3.746045 TCGTTACCAGCTTGAGTTCTT 57.254 42.857 0.00 0.00 0.00 2.52
121 122 4.859304 TCGTTACCAGCTTGAGTTCTTA 57.141 40.909 0.00 0.00 0.00 2.10
122 123 4.806330 TCGTTACCAGCTTGAGTTCTTAG 58.194 43.478 0.00 0.00 0.00 2.18
123 124 4.280174 TCGTTACCAGCTTGAGTTCTTAGT 59.720 41.667 0.00 0.00 0.00 2.24
124 125 4.621886 CGTTACCAGCTTGAGTTCTTAGTC 59.378 45.833 0.00 0.00 0.00 2.59
125 126 3.305398 ACCAGCTTGAGTTCTTAGTCG 57.695 47.619 0.00 0.00 0.00 4.18
126 127 2.028930 ACCAGCTTGAGTTCTTAGTCGG 60.029 50.000 0.00 0.00 0.00 4.79
127 128 1.996191 CAGCTTGAGTTCTTAGTCGGC 59.004 52.381 0.00 0.00 0.00 5.54
128 129 1.618837 AGCTTGAGTTCTTAGTCGGCA 59.381 47.619 0.00 0.00 31.66 5.69
129 130 1.727335 GCTTGAGTTCTTAGTCGGCAC 59.273 52.381 0.00 0.00 0.00 5.01
130 131 2.866460 GCTTGAGTTCTTAGTCGGCACA 60.866 50.000 0.00 0.00 0.00 4.57
131 132 3.589988 CTTGAGTTCTTAGTCGGCACAT 58.410 45.455 0.00 0.00 0.00 3.21
132 133 2.959516 TGAGTTCTTAGTCGGCACATG 58.040 47.619 0.00 0.00 0.00 3.21
133 134 2.271800 GAGTTCTTAGTCGGCACATGG 58.728 52.381 0.00 0.00 0.00 3.66
134 135 0.727398 GTTCTTAGTCGGCACATGGC 59.273 55.000 0.00 0.00 43.74 4.40
145 146 4.746309 ACATGGCGGGCTGTGCAT 62.746 61.111 2.38 0.00 0.00 3.96
146 147 2.516695 CATGGCGGGCTGTGCATA 60.517 61.111 2.38 0.00 0.00 3.14
147 148 2.203252 ATGGCGGGCTGTGCATAG 60.203 61.111 6.03 6.03 0.00 2.23
149 150 4.864334 GGCGGGCTGTGCATAGCT 62.864 66.667 30.86 0.00 43.22 3.32
150 151 3.275338 GCGGGCTGTGCATAGCTC 61.275 66.667 30.86 27.77 43.22 4.09
151 152 2.187685 CGGGCTGTGCATAGCTCA 59.812 61.111 31.34 4.92 44.54 4.26
152 153 1.227764 CGGGCTGTGCATAGCTCAT 60.228 57.895 31.34 0.00 44.54 2.90
153 154 0.033920 CGGGCTGTGCATAGCTCATA 59.966 55.000 31.34 0.00 44.54 2.15
154 155 1.338484 CGGGCTGTGCATAGCTCATAT 60.338 52.381 31.34 0.00 44.54 1.78
155 156 2.354259 GGGCTGTGCATAGCTCATATC 58.646 52.381 30.86 15.45 43.74 1.63
156 157 2.027377 GGGCTGTGCATAGCTCATATCT 60.027 50.000 30.86 0.00 43.74 1.98
157 158 3.001414 GGCTGTGCATAGCTCATATCTG 58.999 50.000 30.86 1.12 43.22 2.90
158 159 3.306571 GGCTGTGCATAGCTCATATCTGA 60.307 47.826 30.86 0.00 43.22 3.27
159 160 3.679025 GCTGTGCATAGCTCATATCTGAC 59.321 47.826 26.32 0.00 40.52 3.51
160 161 3.905784 TGTGCATAGCTCATATCTGACG 58.094 45.455 0.00 0.00 0.00 4.35
161 162 2.665537 GTGCATAGCTCATATCTGACGC 59.334 50.000 0.00 0.00 0.00 5.19
162 163 2.297033 TGCATAGCTCATATCTGACGCA 59.703 45.455 0.00 0.00 31.77 5.24
163 164 3.056322 TGCATAGCTCATATCTGACGCAT 60.056 43.478 0.00 0.00 31.77 4.73
164 165 3.306434 GCATAGCTCATATCTGACGCATG 59.694 47.826 0.00 0.00 31.77 4.06
165 166 4.492611 CATAGCTCATATCTGACGCATGT 58.507 43.478 0.00 0.00 31.77 3.21
166 167 3.023946 AGCTCATATCTGACGCATGTC 57.976 47.619 0.00 0.00 45.71 3.06
174 175 4.169102 GACGCATGTCGAGCTGAA 57.831 55.556 14.88 0.00 41.67 3.02
175 176 2.670635 GACGCATGTCGAGCTGAAT 58.329 52.632 14.88 0.00 41.67 2.57
176 177 1.002366 GACGCATGTCGAGCTGAATT 58.998 50.000 14.88 0.00 41.67 2.17
177 178 1.002366 ACGCATGTCGAGCTGAATTC 58.998 50.000 14.88 0.00 41.67 2.17
178 179 0.302890 CGCATGTCGAGCTGAATTCC 59.697 55.000 2.27 0.00 41.67 3.01
179 180 1.372582 GCATGTCGAGCTGAATTCCA 58.627 50.000 2.27 0.00 0.00 3.53
180 181 1.739466 GCATGTCGAGCTGAATTCCAA 59.261 47.619 2.27 0.00 0.00 3.53
181 182 2.223203 GCATGTCGAGCTGAATTCCAAG 60.223 50.000 2.27 0.00 0.00 3.61
182 183 1.442769 TGTCGAGCTGAATTCCAAGC 58.557 50.000 9.24 9.24 0.00 4.01
183 184 1.270785 TGTCGAGCTGAATTCCAAGCA 60.271 47.619 17.32 0.00 0.00 3.91
184 185 2.012673 GTCGAGCTGAATTCCAAGCAT 58.987 47.619 17.32 5.38 0.00 3.79
185 186 3.198068 GTCGAGCTGAATTCCAAGCATA 58.802 45.455 17.32 2.73 0.00 3.14
186 187 3.001736 GTCGAGCTGAATTCCAAGCATAC 59.998 47.826 17.32 9.69 0.00 2.39
187 188 2.938451 CGAGCTGAATTCCAAGCATACA 59.062 45.455 17.32 0.00 0.00 2.29
188 189 3.562973 CGAGCTGAATTCCAAGCATACAT 59.437 43.478 17.32 0.00 0.00 2.29
189 190 4.036027 CGAGCTGAATTCCAAGCATACATT 59.964 41.667 17.32 0.00 0.00 2.71
190 191 5.237127 CGAGCTGAATTCCAAGCATACATTA 59.763 40.000 17.32 0.00 0.00 1.90
191 192 6.565435 CGAGCTGAATTCCAAGCATACATTAG 60.565 42.308 17.32 0.00 0.00 1.73
192 193 6.125029 AGCTGAATTCCAAGCATACATTAGT 58.875 36.000 17.32 0.00 0.00 2.24
193 194 7.282585 AGCTGAATTCCAAGCATACATTAGTA 58.717 34.615 17.32 0.00 34.10 1.82
194 195 7.941238 AGCTGAATTCCAAGCATACATTAGTAT 59.059 33.333 17.32 0.00 41.57 2.12
195 196 9.219603 GCTGAATTCCAAGCATACATTAGTATA 57.780 33.333 11.78 0.00 38.88 1.47
203 204 9.601217 CCAAGCATACATTAGTATAATACTCCC 57.399 37.037 0.00 0.00 38.88 4.30
206 207 9.203163 AGCATACATTAGTATAATACTCCCTCC 57.797 37.037 0.00 0.00 38.88 4.30
207 208 8.978472 GCATACATTAGTATAATACTCCCTCCA 58.022 37.037 0.00 0.00 38.88 3.86
211 212 9.047947 ACATTAGTATAATACTCCCTCCATTCC 57.952 37.037 0.00 0.00 40.14 3.01
212 213 9.046846 CATTAGTATAATACTCCCTCCATTCCA 57.953 37.037 0.00 0.00 40.14 3.53
213 214 9.805204 ATTAGTATAATACTCCCTCCATTCCAT 57.195 33.333 0.00 0.00 40.14 3.41
216 217 9.805204 AGTATAATACTCCCTCCATTCCATAAT 57.195 33.333 0.00 0.00 32.47 1.28
217 218 9.838339 GTATAATACTCCCTCCATTCCATAATG 57.162 37.037 0.00 0.00 41.90 1.90
218 219 6.786843 AATACTCCCTCCATTCCATAATGT 57.213 37.500 0.00 0.00 40.84 2.71
219 220 7.888514 AATACTCCCTCCATTCCATAATGTA 57.111 36.000 0.00 0.00 40.84 2.29
220 221 5.832539 ACTCCCTCCATTCCATAATGTAG 57.167 43.478 0.00 0.00 40.84 2.74
221 222 5.227593 ACTCCCTCCATTCCATAATGTAGT 58.772 41.667 0.00 0.00 40.84 2.73
222 223 5.072329 ACTCCCTCCATTCCATAATGTAGTG 59.928 44.000 0.00 0.00 40.84 2.74
223 224 4.074970 CCCTCCATTCCATAATGTAGTGC 58.925 47.826 0.00 0.00 40.84 4.40
224 225 4.074970 CCTCCATTCCATAATGTAGTGCC 58.925 47.826 0.00 0.00 40.84 5.01
225 226 4.202503 CCTCCATTCCATAATGTAGTGCCT 60.203 45.833 0.00 0.00 40.84 4.75
226 227 5.013079 CCTCCATTCCATAATGTAGTGCCTA 59.987 44.000 0.00 0.00 40.84 3.93
227 228 6.296662 CCTCCATTCCATAATGTAGTGCCTAT 60.297 42.308 0.00 0.00 40.84 2.57
228 229 7.092891 CCTCCATTCCATAATGTAGTGCCTATA 60.093 40.741 0.00 0.00 40.84 1.31
229 230 7.851228 TCCATTCCATAATGTAGTGCCTATAG 58.149 38.462 0.00 0.00 40.84 1.31
230 231 7.678171 TCCATTCCATAATGTAGTGCCTATAGA 59.322 37.037 0.00 0.00 40.84 1.98
231 232 8.489489 CCATTCCATAATGTAGTGCCTATAGAT 58.511 37.037 0.00 0.00 40.84 1.98
232 233 9.896645 CATTCCATAATGTAGTGCCTATAGATT 57.103 33.333 0.00 0.00 38.15 2.40
262 263 7.446001 AAAAGTCAAATTTTGCCAACTTTGA 57.554 28.000 19.73 10.74 38.54 2.69
263 264 7.628769 AAAGTCAAATTTTGCCAACTTTGAT 57.371 28.000 18.92 2.71 41.20 2.57
264 265 6.849588 AGTCAAATTTTGCCAACTTTGATC 57.150 33.333 15.88 11.08 41.20 2.92
265 266 6.347696 AGTCAAATTTTGCCAACTTTGATCA 58.652 32.000 15.88 0.00 41.20 2.92
266 267 6.822676 AGTCAAATTTTGCCAACTTTGATCAA 59.177 30.769 15.88 3.38 41.20 2.57
267 268 7.011669 AGTCAAATTTTGCCAACTTTGATCAAG 59.988 33.333 15.88 5.87 41.20 3.02
269 270 6.607735 AATTTTGCCAACTTTGATCAAGTG 57.392 33.333 8.41 8.41 45.77 3.16
270 271 4.734398 TTTGCCAACTTTGATCAAGTGT 57.266 36.364 8.41 9.04 45.77 3.55
271 272 5.843673 TTTGCCAACTTTGATCAAGTGTA 57.156 34.783 8.41 0.00 45.77 2.90
272 273 6.403866 TTTGCCAACTTTGATCAAGTGTAT 57.596 33.333 8.41 1.67 45.77 2.29
273 274 7.517614 TTTGCCAACTTTGATCAAGTGTATA 57.482 32.000 8.41 0.00 45.77 1.47
274 275 6.741992 TGCCAACTTTGATCAAGTGTATAG 57.258 37.500 8.41 4.70 45.77 1.31
275 276 6.472016 TGCCAACTTTGATCAAGTGTATAGA 58.528 36.000 8.41 0.00 45.77 1.98
276 277 6.595326 TGCCAACTTTGATCAAGTGTATAGAG 59.405 38.462 8.41 3.25 45.77 2.43
277 278 6.818644 GCCAACTTTGATCAAGTGTATAGAGA 59.181 38.462 8.41 0.00 45.77 3.10
278 279 7.334421 GCCAACTTTGATCAAGTGTATAGAGAA 59.666 37.037 8.41 0.00 45.77 2.87
279 280 9.219603 CCAACTTTGATCAAGTGTATAGAGAAA 57.780 33.333 8.41 0.00 45.77 2.52
305 306 9.733556 AATTGTCTACATCTACAATACCAAACA 57.266 29.630 0.00 0.00 43.66 2.83
306 307 9.905713 ATTGTCTACATCTACAATACCAAACAT 57.094 29.630 0.00 0.00 42.87 2.71
307 308 8.716646 TGTCTACATCTACAATACCAAACATG 57.283 34.615 0.00 0.00 0.00 3.21
308 309 8.318412 TGTCTACATCTACAATACCAAACATGT 58.682 33.333 0.00 0.00 0.00 3.21
309 310 9.811995 GTCTACATCTACAATACCAAACATGTA 57.188 33.333 0.00 0.00 0.00 2.29
339 340 9.692749 TCTGAAAATATAACTCACGATGTATCC 57.307 33.333 0.00 0.00 0.00 2.59
340 341 9.476202 CTGAAAATATAACTCACGATGTATCCA 57.524 33.333 0.00 0.00 0.00 3.41
341 342 9.825109 TGAAAATATAACTCACGATGTATCCAA 57.175 29.630 0.00 0.00 0.00 3.53
344 345 9.996554 AAATATAACTCACGATGTATCCAATGA 57.003 29.630 0.00 0.00 0.00 2.57
345 346 9.645059 AATATAACTCACGATGTATCCAATGAG 57.355 33.333 11.14 11.14 39.56 2.90
346 347 4.327982 ACTCACGATGTATCCAATGAGG 57.672 45.455 14.71 0.00 38.29 3.86
347 348 3.706594 ACTCACGATGTATCCAATGAGGT 59.293 43.478 14.71 4.23 38.29 3.85
348 349 4.053983 CTCACGATGTATCCAATGAGGTG 58.946 47.826 0.00 0.00 39.02 4.00
349 350 2.545526 CACGATGTATCCAATGAGGTGC 59.454 50.000 0.00 0.00 39.02 5.01
350 351 2.170397 ACGATGTATCCAATGAGGTGCA 59.830 45.455 0.00 0.00 39.02 4.57
351 352 3.181451 ACGATGTATCCAATGAGGTGCAT 60.181 43.478 0.00 0.00 39.43 3.96
353 354 4.276678 CGATGTATCCAATGAGGTGCATTT 59.723 41.667 0.00 0.00 44.68 2.32
354 355 4.987408 TGTATCCAATGAGGTGCATTTG 57.013 40.909 0.00 0.00 44.68 2.32
355 356 3.700539 TGTATCCAATGAGGTGCATTTGG 59.299 43.478 0.00 0.00 44.68 3.28
356 357 2.307496 TCCAATGAGGTGCATTTGGT 57.693 45.000 12.19 0.00 44.68 3.67
357 358 3.448093 TCCAATGAGGTGCATTTGGTA 57.552 42.857 12.19 1.94 44.68 3.25
358 359 3.979911 TCCAATGAGGTGCATTTGGTAT 58.020 40.909 12.19 0.00 44.68 2.73
359 360 4.352009 TCCAATGAGGTGCATTTGGTATT 58.648 39.130 12.19 0.00 44.68 1.89
360 361 4.402155 TCCAATGAGGTGCATTTGGTATTC 59.598 41.667 12.19 0.00 44.68 1.75
361 362 4.403432 CCAATGAGGTGCATTTGGTATTCT 59.597 41.667 0.00 0.00 44.68 2.40
362 363 5.593909 CCAATGAGGTGCATTTGGTATTCTA 59.406 40.000 0.00 0.00 44.68 2.10
363 364 6.238842 CCAATGAGGTGCATTTGGTATTCTAG 60.239 42.308 0.00 0.00 44.68 2.43
364 365 5.692115 TGAGGTGCATTTGGTATTCTAGA 57.308 39.130 0.00 0.00 0.00 2.43
365 366 6.252599 TGAGGTGCATTTGGTATTCTAGAT 57.747 37.500 0.00 0.00 0.00 1.98
366 367 7.373617 TGAGGTGCATTTGGTATTCTAGATA 57.626 36.000 0.00 0.00 0.00 1.98
367 368 7.977818 TGAGGTGCATTTGGTATTCTAGATAT 58.022 34.615 0.00 0.00 0.00 1.63
368 369 9.100197 TGAGGTGCATTTGGTATTCTAGATATA 57.900 33.333 0.00 0.00 0.00 0.86
369 370 9.372369 GAGGTGCATTTGGTATTCTAGATATAC 57.628 37.037 12.79 12.79 0.00 1.47
370 371 8.322091 AGGTGCATTTGGTATTCTAGATATACC 58.678 37.037 23.56 23.56 45.08 2.73
371 372 8.322091 GGTGCATTTGGTATTCTAGATATACCT 58.678 37.037 26.85 15.24 45.10 3.08
394 395 9.656323 ACCTACTTTTCTCTATATACATGGTCA 57.344 33.333 0.00 0.00 0.00 4.02
411 412 8.954950 ACATGGTCAAAATTTGTAATGTTTGA 57.045 26.923 5.56 0.00 37.58 2.69
418 419 9.868277 TCAAAATTTGTAATGTTTGACTTCTGT 57.132 25.926 5.56 0.00 35.60 3.41
432 433 9.989869 GTTTGACTTCTGTAAAAATCTATAGGC 57.010 33.333 0.00 0.00 29.00 3.93
433 434 9.733556 TTTGACTTCTGTAAAAATCTATAGGCA 57.266 29.630 0.00 0.00 0.00 4.75
434 435 8.718102 TGACTTCTGTAAAAATCTATAGGCAC 57.282 34.615 0.00 0.00 0.00 5.01
435 436 8.540388 TGACTTCTGTAAAAATCTATAGGCACT 58.460 33.333 0.00 0.00 46.37 4.40
450 451 4.481368 AGGCACTACATTATGAAACGGA 57.519 40.909 0.00 0.00 36.02 4.69
451 452 4.442706 AGGCACTACATTATGAAACGGAG 58.557 43.478 0.00 0.00 36.02 4.63
452 453 3.560068 GGCACTACATTATGAAACGGAGG 59.440 47.826 0.00 0.00 0.00 4.30
453 454 3.560068 GCACTACATTATGAAACGGAGGG 59.440 47.826 0.00 0.00 0.00 4.30
454 455 4.682320 GCACTACATTATGAAACGGAGGGA 60.682 45.833 0.00 0.00 0.00 4.20
455 456 5.050490 CACTACATTATGAAACGGAGGGAG 58.950 45.833 0.00 0.00 0.00 4.30
487 488 4.038162 TGTTTGACCAAGGTTTTTATCCGG 59.962 41.667 0.00 0.00 0.00 5.14
490 491 4.013728 TGACCAAGGTTTTTATCCGGATG 58.986 43.478 27.55 8.10 0.00 3.51
498 499 8.850156 CAAGGTTTTTATCCGGATGATATTTCT 58.150 33.333 27.55 12.65 35.87 2.52
513 515 6.749139 TGATATTTCTACTAGCAGCACGAAT 58.251 36.000 0.00 0.00 0.00 3.34
541 543 1.274596 CAAAAGATGCGCAATGGCTC 58.725 50.000 17.11 7.09 38.10 4.70
633 635 0.949105 ACGTCAGTTTCCCGCACATC 60.949 55.000 0.00 0.00 0.00 3.06
778 974 4.048470 GACCCAGGCCCTGTTCCC 62.048 72.222 10.47 0.00 0.00 3.97
779 975 4.617595 ACCCAGGCCCTGTTCCCT 62.618 66.667 10.47 0.00 0.00 4.20
780 976 3.732849 CCCAGGCCCTGTTCCCTC 61.733 72.222 10.47 0.00 0.00 4.30
781 977 4.101448 CCAGGCCCTGTTCCCTCG 62.101 72.222 10.47 0.00 0.00 4.63
782 978 4.785453 CAGGCCCTGTTCCCTCGC 62.785 72.222 1.39 0.00 0.00 5.03
784 980 4.785453 GGCCCTGTTCCCTCGCTG 62.785 72.222 0.00 0.00 0.00 5.18
785 981 3.706373 GCCCTGTTCCCTCGCTGA 61.706 66.667 0.00 0.00 0.00 4.26
786 982 2.581354 CCCTGTTCCCTCGCTGAG 59.419 66.667 0.00 0.00 0.00 3.35
824 1022 0.971386 GACAAAGTCCACCTCCCGTA 59.029 55.000 0.00 0.00 0.00 4.02
833 1031 2.125961 ACCTCCCGTAAGCTAGCCG 61.126 63.158 12.13 8.06 0.00 5.52
836 1034 3.537874 CCCGTAAGCTAGCCGCCT 61.538 66.667 12.13 0.00 40.39 5.52
837 1035 2.198287 CCCGTAAGCTAGCCGCCTA 61.198 63.158 12.13 0.00 40.39 3.93
838 1036 1.286260 CCGTAAGCTAGCCGCCTAG 59.714 63.158 12.13 0.00 43.23 3.02
839 1037 1.170919 CCGTAAGCTAGCCGCCTAGA 61.171 60.000 12.13 0.00 43.07 2.43
840 1038 0.040246 CGTAAGCTAGCCGCCTAGAC 60.040 60.000 12.13 0.00 43.07 2.59
841 1039 1.320507 GTAAGCTAGCCGCCTAGACT 58.679 55.000 12.13 0.00 43.07 3.24
842 1040 2.502295 GTAAGCTAGCCGCCTAGACTA 58.498 52.381 12.13 0.00 43.07 2.59
843 1041 1.611519 AAGCTAGCCGCCTAGACTAG 58.388 55.000 12.13 2.18 43.07 2.57
844 1042 0.766131 AGCTAGCCGCCTAGACTAGA 59.234 55.000 12.13 0.00 43.07 2.43
845 1043 0.876399 GCTAGCCGCCTAGACTAGAC 59.124 60.000 11.27 0.00 43.07 2.59
846 1044 1.543871 GCTAGCCGCCTAGACTAGACT 60.544 57.143 11.27 0.00 43.07 3.24
847 1045 2.419667 CTAGCCGCCTAGACTAGACTC 58.580 57.143 11.27 0.00 43.07 3.36
848 1046 0.533308 AGCCGCCTAGACTAGACTCG 60.533 60.000 11.27 10.52 0.00 4.18
849 1047 1.943293 CCGCCTAGACTAGACTCGC 59.057 63.158 11.27 4.88 0.00 5.03
850 1048 0.533308 CCGCCTAGACTAGACTCGCT 60.533 60.000 11.27 0.00 0.00 4.93
851 1049 0.863144 CGCCTAGACTAGACTCGCTC 59.137 60.000 11.27 0.00 0.00 5.03
852 1050 1.232119 GCCTAGACTAGACTCGCTCC 58.768 60.000 11.27 0.00 0.00 4.70
853 1051 1.886886 CCTAGACTAGACTCGCTCCC 58.113 60.000 11.27 0.00 0.00 4.30
854 1052 1.543871 CCTAGACTAGACTCGCTCCCC 60.544 61.905 11.27 0.00 0.00 4.81
855 1053 0.473326 TAGACTAGACTCGCTCCCCC 59.527 60.000 0.00 0.00 0.00 5.40
897 1095 4.496336 GCGGCCTCCTCCATTGCT 62.496 66.667 0.00 0.00 0.00 3.91
898 1096 2.273449 CGGCCTCCTCCATTGCTT 59.727 61.111 0.00 0.00 0.00 3.91
899 1097 1.821332 CGGCCTCCTCCATTGCTTC 60.821 63.158 0.00 0.00 0.00 3.86
900 1098 1.611965 GGCCTCCTCCATTGCTTCT 59.388 57.895 0.00 0.00 0.00 2.85
901 1099 0.465278 GGCCTCCTCCATTGCTTCTC 60.465 60.000 0.00 0.00 0.00 2.87
929 1127 3.085533 TCTCTTCTTCCTCTCTCCGTTG 58.914 50.000 0.00 0.00 0.00 4.10
930 1128 1.546476 TCTTCTTCCTCTCTCCGTTGC 59.454 52.381 0.00 0.00 0.00 4.17
931 1129 0.608640 TTCTTCCTCTCTCCGTTGCC 59.391 55.000 0.00 0.00 0.00 4.52
932 1130 0.541998 TCTTCCTCTCTCCGTTGCCA 60.542 55.000 0.00 0.00 0.00 4.92
933 1131 0.108424 CTTCCTCTCTCCGTTGCCAG 60.108 60.000 0.00 0.00 0.00 4.85
934 1132 0.541998 TTCCTCTCTCCGTTGCCAGA 60.542 55.000 0.00 0.00 0.00 3.86
935 1133 0.967887 TCCTCTCTCCGTTGCCAGAG 60.968 60.000 0.00 0.00 38.01 3.35
936 1134 1.153667 CTCTCTCCGTTGCCAGAGC 60.154 63.158 0.00 0.00 36.79 4.09
937 1135 2.507992 CTCTCCGTTGCCAGAGCG 60.508 66.667 0.00 0.00 44.31 5.03
938 1136 4.742201 TCTCCGTTGCCAGAGCGC 62.742 66.667 0.00 0.00 44.31 5.92
979 1177 1.021968 AACGGGAGTCACTTTGTTGC 58.978 50.000 0.00 0.00 46.69 4.17
982 1180 1.810031 CGGGAGTCACTTTGTTGCTGA 60.810 52.381 0.00 0.00 0.00 4.26
1008 1206 1.205893 GAGACGGGCAGAATGTCTTCT 59.794 52.381 0.00 0.00 43.10 2.85
1568 1772 4.096003 CACGCCGGAGTTCCCCAT 62.096 66.667 8.62 0.00 0.00 4.00
1986 2211 4.098044 TCCGAAAACTACATAGCTCTCTGG 59.902 45.833 0.00 0.00 0.00 3.86
2053 2279 7.814642 ACATGTGTTCATTCTTTCATCTTCTC 58.185 34.615 0.00 0.00 31.15 2.87
2060 2286 7.270832 TCATTCTTTCATCTTCTCCCCTTTA 57.729 36.000 0.00 0.00 0.00 1.85
2061 2287 7.698912 TCATTCTTTCATCTTCTCCCCTTTAA 58.301 34.615 0.00 0.00 0.00 1.52
2064 2290 8.581253 TTCTTTCATCTTCTCCCCTTTAATTC 57.419 34.615 0.00 0.00 0.00 2.17
2065 2291 7.933223 TCTTTCATCTTCTCCCCTTTAATTCT 58.067 34.615 0.00 0.00 0.00 2.40
2066 2292 8.049721 TCTTTCATCTTCTCCCCTTTAATTCTC 58.950 37.037 0.00 0.00 0.00 2.87
2067 2293 7.516450 TTCATCTTCTCCCCTTTAATTCTCT 57.484 36.000 0.00 0.00 0.00 3.10
2187 2420 8.080417 GTCGATGGATCATTGATGAAATTGATT 58.920 33.333 3.32 0.00 40.69 2.57
2188 2421 8.079809 TCGATGGATCATTGATGAAATTGATTG 58.920 33.333 3.32 0.00 40.69 2.67
2192 2425 6.990349 GGATCATTGATGAAATTGATTGGCTT 59.010 34.615 3.32 0.00 40.69 4.35
2201 2434 8.712285 ATGAAATTGATTGGCTTTGTTCATAG 57.288 30.769 0.00 0.00 33.80 2.23
2204 2437 8.986477 AAATTGATTGGCTTTGTTCATAGTAC 57.014 30.769 0.00 0.00 0.00 2.73
2206 2439 7.517614 TTGATTGGCTTTGTTCATAGTACAA 57.482 32.000 0.00 0.00 33.92 2.41
2209 2442 6.892658 TTGGCTTTGTTCATAGTACAATGT 57.107 33.333 0.00 0.00 35.60 2.71
2211 2444 6.676950 TGGCTTTGTTCATAGTACAATGTTG 58.323 36.000 0.00 0.00 35.60 3.33
2213 2446 7.176515 TGGCTTTGTTCATAGTACAATGTTGAT 59.823 33.333 0.00 0.00 35.60 2.57
2214 2447 7.485913 GGCTTTGTTCATAGTACAATGTTGATG 59.514 37.037 0.00 0.00 35.60 3.07
2215 2448 8.236586 GCTTTGTTCATAGTACAATGTTGATGA 58.763 33.333 0.00 0.00 35.60 2.92
2216 2449 9.764870 CTTTGTTCATAGTACAATGTTGATGAG 57.235 33.333 0.00 0.00 35.60 2.90
2218 2451 9.671279 TTGTTCATAGTACAATGTTGATGAGAT 57.329 29.630 0.00 0.00 30.96 2.75
2219 2452 9.671279 TGTTCATAGTACAATGTTGATGAGATT 57.329 29.630 0.00 0.00 0.00 2.40
2220 2453 9.926751 GTTCATAGTACAATGTTGATGAGATTG 57.073 33.333 0.00 0.00 42.91 2.67
2221 2454 8.146479 TCATAGTACAATGTTGATGAGATTGC 57.854 34.615 0.00 0.00 41.44 3.56
2222 2455 7.989170 TCATAGTACAATGTTGATGAGATTGCT 59.011 33.333 0.00 0.00 41.44 3.91
2223 2456 6.674694 AGTACAATGTTGATGAGATTGCTC 57.325 37.500 0.00 0.00 41.44 4.26
2224 2457 6.413052 AGTACAATGTTGATGAGATTGCTCT 58.587 36.000 0.00 0.00 41.44 4.09
2225 2458 6.883217 AGTACAATGTTGATGAGATTGCTCTT 59.117 34.615 0.00 0.00 41.44 2.85
2226 2459 6.192234 ACAATGTTGATGAGATTGCTCTTC 57.808 37.500 0.00 0.00 41.44 2.87
2227 2460 5.944599 ACAATGTTGATGAGATTGCTCTTCT 59.055 36.000 0.00 0.00 41.44 2.85
2228 2461 7.108194 ACAATGTTGATGAGATTGCTCTTCTA 58.892 34.615 0.00 0.00 41.44 2.10
2229 2462 7.065563 ACAATGTTGATGAGATTGCTCTTCTAC 59.934 37.037 12.73 12.73 44.01 2.59
2230 2463 6.291648 TGTTGATGAGATTGCTCTTCTACT 57.708 37.500 17.18 0.00 44.04 2.57
2231 2464 6.705302 TGTTGATGAGATTGCTCTTCTACTT 58.295 36.000 17.18 0.00 44.04 2.24
2232 2465 6.815641 TGTTGATGAGATTGCTCTTCTACTTC 59.184 38.462 17.18 0.00 44.04 3.01
2233 2466 6.788598 TGATGAGATTGCTCTTCTACTTCT 57.211 37.500 0.00 0.00 42.66 2.85
2234 2467 6.804677 TGATGAGATTGCTCTTCTACTTCTC 58.195 40.000 0.00 0.00 42.66 2.87
2235 2468 6.606796 TGATGAGATTGCTCTTCTACTTCTCT 59.393 38.462 0.00 0.00 42.66 3.10
2236 2469 6.206395 TGAGATTGCTCTTCTACTTCTCTG 57.794 41.667 0.00 0.00 41.84 3.35
2237 2470 5.126869 TGAGATTGCTCTTCTACTTCTCTGG 59.873 44.000 0.00 0.00 41.84 3.86
2238 2471 5.268387 AGATTGCTCTTCTACTTCTCTGGA 58.732 41.667 0.00 0.00 0.00 3.86
2239 2472 5.360714 AGATTGCTCTTCTACTTCTCTGGAG 59.639 44.000 0.00 0.00 0.00 3.86
2240 2473 4.308526 TGCTCTTCTACTTCTCTGGAGA 57.691 45.455 0.00 0.00 35.27 3.71
2241 2474 4.013728 TGCTCTTCTACTTCTCTGGAGAC 58.986 47.826 0.00 0.00 37.14 3.36
2242 2475 3.380320 GCTCTTCTACTTCTCTGGAGACC 59.620 52.174 0.00 0.00 37.14 3.85
2243 2476 4.594970 CTCTTCTACTTCTCTGGAGACCA 58.405 47.826 0.00 0.00 37.14 4.02
2261 2494 4.758674 AGACCAGTGAGATGAATGTGTTTG 59.241 41.667 0.00 0.00 0.00 2.93
2286 2519 2.039480 TGAACTCTGCTTCTTCATGCCT 59.961 45.455 0.00 0.00 0.00 4.75
2287 2520 2.399916 ACTCTGCTTCTTCATGCCTC 57.600 50.000 0.00 0.00 0.00 4.70
2288 2521 1.627329 ACTCTGCTTCTTCATGCCTCA 59.373 47.619 0.00 0.00 0.00 3.86
2289 2522 2.008329 CTCTGCTTCTTCATGCCTCAC 58.992 52.381 0.00 0.00 0.00 3.51
2290 2523 1.093159 CTGCTTCTTCATGCCTCACC 58.907 55.000 0.00 0.00 0.00 4.02
2291 2524 0.401356 TGCTTCTTCATGCCTCACCA 59.599 50.000 0.00 0.00 0.00 4.17
2292 2525 1.093159 GCTTCTTCATGCCTCACCAG 58.907 55.000 0.00 0.00 0.00 4.00
2293 2526 1.093159 CTTCTTCATGCCTCACCAGC 58.907 55.000 0.00 0.00 0.00 4.85
2294 2527 0.401356 TTCTTCATGCCTCACCAGCA 59.599 50.000 0.00 0.00 45.94 4.41
2295 2528 0.035725 TCTTCATGCCTCACCAGCAG 60.036 55.000 0.00 0.00 44.90 4.24
2296 2529 1.654954 CTTCATGCCTCACCAGCAGC 61.655 60.000 0.00 0.00 44.90 5.25
2297 2530 2.360726 CATGCCTCACCAGCAGCA 60.361 61.111 0.00 0.00 44.90 4.41
2298 2531 2.360852 ATGCCTCACCAGCAGCAC 60.361 61.111 0.00 0.00 44.90 4.40
2305 2538 2.203523 ACCAGCAGCACATTGCCA 60.204 55.556 0.00 0.00 46.52 4.92
2322 2571 1.386533 CCACATTCATCCACCAGCTC 58.613 55.000 0.00 0.00 0.00 4.09
2327 2576 2.205022 TTCATCCACCAGCTCCAAAG 57.795 50.000 0.00 0.00 0.00 2.77
2339 2588 3.633986 CAGCTCCAAAGAAAAGTCACCTT 59.366 43.478 0.00 0.00 0.00 3.50
2342 2591 4.498177 GCTCCAAAGAAAAGTCACCTTGTC 60.498 45.833 0.00 0.00 35.46 3.18
2344 2593 4.640201 TCCAAAGAAAAGTCACCTTGTCTG 59.360 41.667 0.00 0.00 43.22 3.51
2356 2607 3.068165 CACCTTGTCTGTGACTGACTGTA 59.932 47.826 20.64 7.90 35.74 2.74
2360 2611 4.307443 TGTCTGTGACTGACTGTACTTG 57.693 45.455 20.64 0.00 34.25 3.16
2372 2623 9.291664 GACTGACTGTACTTGTGATTAGATAAC 57.708 37.037 0.00 0.00 0.00 1.89
2395 2646 8.761575 AACAAATTATTACGACCGAGTTAAGA 57.238 30.769 0.00 0.00 0.00 2.10
2396 2647 8.761575 ACAAATTATTACGACCGAGTTAAGAA 57.238 30.769 0.00 0.00 0.00 2.52
2397 2648 8.866956 ACAAATTATTACGACCGAGTTAAGAAG 58.133 33.333 0.00 0.00 0.00 2.85
2398 2649 8.866956 CAAATTATTACGACCGAGTTAAGAAGT 58.133 33.333 0.00 0.00 0.00 3.01
2400 2651 9.727627 AATTATTACGACCGAGTTAAGAAGTAG 57.272 33.333 0.00 0.00 0.00 2.57
2407 2658 6.507958 ACCGAGTTAAGAAGTAGTAGTTCC 57.492 41.667 13.14 0.00 0.00 3.62
2446 2697 0.532573 GCGATCCCTGAAGTCAGTCA 59.467 55.000 7.51 0.00 42.27 3.41
2453 2704 2.341257 CCTGAAGTCAGTCATGAACCG 58.659 52.381 0.00 0.00 42.27 4.44
2460 2712 0.376152 CAGTCATGAACCGCATCAGC 59.624 55.000 0.00 0.00 34.15 4.26
2559 2945 4.090057 GCCGCGTGAGGAAAGCAC 62.090 66.667 4.92 0.00 32.02 4.40
2569 2955 1.971695 GGAAAGCACCTCAACCCGG 60.972 63.158 0.00 0.00 0.00 5.73
2571 2957 3.429372 AAAGCACCTCAACCCGGCA 62.429 57.895 0.00 0.00 0.00 5.69
2572 2958 4.643387 AGCACCTCAACCCGGCAC 62.643 66.667 0.00 0.00 0.00 5.01
2606 2992 4.379243 CCAGCGGCCTCACGAGTT 62.379 66.667 0.00 0.00 35.47 3.01
2607 2993 2.811317 CAGCGGCCTCACGAGTTC 60.811 66.667 0.00 0.00 35.47 3.01
2608 2994 4.070552 AGCGGCCTCACGAGTTCC 62.071 66.667 0.00 0.00 35.47 3.62
2609 2995 4.373116 GCGGCCTCACGAGTTCCA 62.373 66.667 0.00 0.00 35.47 3.53
2610 2996 2.125912 CGGCCTCACGAGTTCCAG 60.126 66.667 0.00 0.00 35.47 3.86
2611 2997 2.932234 CGGCCTCACGAGTTCCAGT 61.932 63.158 0.00 0.00 35.47 4.00
2612 2998 1.374758 GGCCTCACGAGTTCCAGTG 60.375 63.158 0.00 0.00 39.55 3.66
2613 2999 2.029844 GCCTCACGAGTTCCAGTGC 61.030 63.158 0.00 0.00 38.19 4.40
2614 3000 1.374758 CCTCACGAGTTCCAGTGCC 60.375 63.158 0.00 0.00 38.19 5.01
2617 3003 0.249868 TCACGAGTTCCAGTGCCTTG 60.250 55.000 0.00 0.00 38.19 3.61
2622 3008 0.886490 AGTTCCAGTGCCTTGAAGCG 60.886 55.000 0.00 0.00 34.65 4.68
2630 3016 3.181967 CCTTGAAGCGTCGCCTCG 61.182 66.667 14.86 0.00 0.00 4.63
2633 3019 3.909258 TTGAAGCGTCGCCTCGTCC 62.909 63.158 14.86 0.00 0.00 4.79
2634 3020 4.415332 GAAGCGTCGCCTCGTCCA 62.415 66.667 14.86 0.00 0.00 4.02
2636 3022 3.916392 AAGCGTCGCCTCGTCCAAG 62.916 63.158 14.86 0.00 0.00 3.61
2638 3024 2.504244 CGTCGCCTCGTCCAAGTC 60.504 66.667 0.00 0.00 0.00 3.01
2639 3025 2.963371 GTCGCCTCGTCCAAGTCT 59.037 61.111 0.00 0.00 0.00 3.24
2640 3026 1.289380 GTCGCCTCGTCCAAGTCTT 59.711 57.895 0.00 0.00 0.00 3.01
2641 3027 0.524862 GTCGCCTCGTCCAAGTCTTA 59.475 55.000 0.00 0.00 0.00 2.10
2642 3028 1.068055 GTCGCCTCGTCCAAGTCTTAA 60.068 52.381 0.00 0.00 0.00 1.85
2643 3029 1.614903 TCGCCTCGTCCAAGTCTTAAA 59.385 47.619 0.00 0.00 0.00 1.52
2644 3030 2.036217 TCGCCTCGTCCAAGTCTTAAAA 59.964 45.455 0.00 0.00 0.00 1.52
2645 3031 2.803956 CGCCTCGTCCAAGTCTTAAAAA 59.196 45.455 0.00 0.00 0.00 1.94
2669 3242 2.031508 TCGAAATTCCGAACCAGTTTGC 60.032 45.455 0.00 0.00 35.42 3.68
2675 3248 0.593128 CCGAACCAGTTTGCTTCCAG 59.407 55.000 0.00 0.00 0.00 3.86
2679 3252 0.538287 ACCAGTTTGCTTCCAGGCTC 60.538 55.000 0.00 0.00 0.00 4.70
2681 3254 0.538057 CAGTTTGCTTCCAGGCTCCA 60.538 55.000 0.00 0.00 0.00 3.86
2683 3256 0.600057 GTTTGCTTCCAGGCTCCAAG 59.400 55.000 0.00 0.00 0.00 3.61
2684 3257 0.185901 TTTGCTTCCAGGCTCCAAGT 59.814 50.000 4.35 0.00 0.00 3.16
2695 3268 1.271379 GGCTCCAAGTACTGGCAAAGA 60.271 52.381 0.00 0.00 45.98 2.52
2697 3270 2.485814 GCTCCAAGTACTGGCAAAGAAG 59.514 50.000 0.00 0.00 45.98 2.85
2701 3274 4.821805 TCCAAGTACTGGCAAAGAAGAAAG 59.178 41.667 0.00 0.00 45.98 2.62
2702 3275 4.580580 CCAAGTACTGGCAAAGAAGAAAGT 59.419 41.667 0.00 0.00 38.76 2.66
2706 3279 7.260558 AGTACTGGCAAAGAAGAAAGTTTAC 57.739 36.000 0.00 0.00 0.00 2.01
2707 3280 5.515797 ACTGGCAAAGAAGAAAGTTTACC 57.484 39.130 0.00 0.00 0.00 2.85
2708 3281 4.036380 ACTGGCAAAGAAGAAAGTTTACCG 59.964 41.667 0.00 0.00 0.00 4.02
2709 3282 3.316868 TGGCAAAGAAGAAAGTTTACCGG 59.683 43.478 0.00 0.00 0.00 5.28
2710 3283 3.317149 GGCAAAGAAGAAAGTTTACCGGT 59.683 43.478 13.98 13.98 0.00 5.28
2711 3284 4.516321 GGCAAAGAAGAAAGTTTACCGGTA 59.484 41.667 11.16 11.16 0.00 4.02
2712 3285 5.334646 GGCAAAGAAGAAAGTTTACCGGTAG 60.335 44.000 15.20 0.00 0.00 3.18
2713 3286 5.237996 GCAAAGAAGAAAGTTTACCGGTAGT 59.762 40.000 15.20 0.64 0.00 2.73
2714 3287 6.424812 GCAAAGAAGAAAGTTTACCGGTAGTA 59.575 38.462 15.20 4.36 0.00 1.82
2715 3288 7.359849 GCAAAGAAGAAAGTTTACCGGTAGTAG 60.360 40.741 15.20 0.00 30.92 2.57
2717 3290 6.918626 AGAAGAAAGTTTACCGGTAGTAGTC 58.081 40.000 15.20 9.87 30.92 2.59
2719 3292 6.264841 AGAAAGTTTACCGGTAGTAGTCTG 57.735 41.667 15.20 0.00 30.92 3.51
2720 3293 5.772169 AGAAAGTTTACCGGTAGTAGTCTGT 59.228 40.000 15.20 5.36 30.92 3.41
2721 3294 5.635417 AAGTTTACCGGTAGTAGTCTGTC 57.365 43.478 15.20 0.00 30.92 3.51
2722 3295 3.686726 AGTTTACCGGTAGTAGTCTGTCG 59.313 47.826 15.20 0.00 30.92 4.35
2723 3296 3.334583 TTACCGGTAGTAGTCTGTCGT 57.665 47.619 15.20 0.00 30.92 4.34
2724 3297 2.191128 ACCGGTAGTAGTCTGTCGTT 57.809 50.000 4.49 0.00 0.00 3.85
2725 3298 2.508526 ACCGGTAGTAGTCTGTCGTTT 58.491 47.619 4.49 0.00 0.00 3.60
2726 3299 2.485814 ACCGGTAGTAGTCTGTCGTTTC 59.514 50.000 4.49 0.00 0.00 2.78
2727 3300 2.475187 CCGGTAGTAGTCTGTCGTTTCG 60.475 54.545 0.00 0.00 0.00 3.46
2728 3301 2.413112 CGGTAGTAGTCTGTCGTTTCGA 59.587 50.000 0.00 0.00 0.00 3.71
2729 3302 3.120546 CGGTAGTAGTCTGTCGTTTCGAA 60.121 47.826 0.00 0.00 37.72 3.71
2730 3303 4.401714 GGTAGTAGTCTGTCGTTTCGAAG 58.598 47.826 0.00 0.00 37.72 3.79
2731 3304 4.083590 GGTAGTAGTCTGTCGTTTCGAAGT 60.084 45.833 0.00 0.00 37.72 3.01
2732 3305 4.144534 AGTAGTCTGTCGTTTCGAAGTC 57.855 45.455 0.00 0.00 37.72 3.01
2733 3306 2.033793 AGTCTGTCGTTTCGAAGTCG 57.966 50.000 15.30 15.30 37.72 4.18
2734 3307 0.430110 GTCTGTCGTTTCGAAGTCGC 59.570 55.000 16.22 12.75 37.72 5.19
2735 3308 0.309922 TCTGTCGTTTCGAAGTCGCT 59.690 50.000 16.22 0.00 37.72 4.93
2736 3309 1.129326 CTGTCGTTTCGAAGTCGCTT 58.871 50.000 16.22 0.00 37.72 4.68
2737 3310 1.122680 CTGTCGTTTCGAAGTCGCTTC 59.877 52.381 16.22 8.87 37.72 3.86
2738 3311 0.433871 GTCGTTTCGAAGTCGCTTCC 59.566 55.000 16.22 4.80 37.72 3.46
2739 3312 1.000233 TCGTTTCGAAGTCGCTTCCG 61.000 55.000 16.22 10.13 37.20 4.30
2767 3340 7.818997 AAGAAATTCTTCTTCTTTACCCGTT 57.181 32.000 1.80 0.00 46.88 4.44
2770 3343 6.954487 AATTCTTCTTCTTTACCCGTTTGT 57.046 33.333 0.00 0.00 0.00 2.83
2779 3352 4.399934 TCTTTACCCGTTTGTTTCAGCTTT 59.600 37.500 0.00 0.00 0.00 3.51
2794 3367 3.573489 CTTTGCCGGTCGAACACGC 62.573 63.158 1.90 1.22 0.00 5.34
2816 3389 2.586635 GCGACCCGTGTGTTGACA 60.587 61.111 0.00 0.00 0.00 3.58
2867 3440 9.173939 CTTTGACTTCACTTAATCAAATCACAC 57.826 33.333 0.00 0.00 39.60 3.82
2869 3442 6.073276 TGACTTCACTTAATCAAATCACACGG 60.073 38.462 0.00 0.00 0.00 4.94
2870 3443 5.763204 ACTTCACTTAATCAAATCACACGGT 59.237 36.000 0.00 0.00 0.00 4.83
2871 3444 6.932400 ACTTCACTTAATCAAATCACACGGTA 59.068 34.615 0.00 0.00 0.00 4.02
2872 3445 7.606456 ACTTCACTTAATCAAATCACACGGTAT 59.394 33.333 0.00 0.00 0.00 2.73
2873 3446 9.093970 CTTCACTTAATCAAATCACACGGTATA 57.906 33.333 0.00 0.00 0.00 1.47
2874 3447 9.607988 TTCACTTAATCAAATCACACGGTATAT 57.392 29.630 0.00 0.00 0.00 0.86
2875 3448 9.256477 TCACTTAATCAAATCACACGGTATATC 57.744 33.333 0.00 0.00 0.00 1.63
2878 3451 8.601845 TTAATCAAATCACACGGTATATCCTG 57.398 34.615 0.00 0.00 0.00 3.86
2879 3452 4.377021 TCAAATCACACGGTATATCCTGC 58.623 43.478 0.00 0.00 0.00 4.85
2880 3453 4.100963 TCAAATCACACGGTATATCCTGCT 59.899 41.667 0.00 0.00 0.00 4.24
2881 3454 4.689612 AATCACACGGTATATCCTGCTT 57.310 40.909 0.00 0.00 0.00 3.91
2882 3455 5.801531 AATCACACGGTATATCCTGCTTA 57.198 39.130 0.00 0.00 0.00 3.09
2886 3459 5.069914 TCACACGGTATATCCTGCTTATGTT 59.930 40.000 0.00 0.00 0.00 2.71
2915 3488 8.990163 TTACTTGTTTATGAACCTCTTCCTTT 57.010 30.769 0.00 0.00 34.80 3.11
2947 3520 3.149196 GTTGCACTTGAGGAAGGATGAA 58.851 45.455 0.00 0.00 32.95 2.57
2948 3521 2.783135 TGCACTTGAGGAAGGATGAAC 58.217 47.619 0.00 0.00 32.95 3.18
2949 3522 2.373169 TGCACTTGAGGAAGGATGAACT 59.627 45.455 0.00 0.00 32.95 3.01
2950 3523 3.582647 TGCACTTGAGGAAGGATGAACTA 59.417 43.478 0.00 0.00 32.95 2.24
2951 3524 4.187694 GCACTTGAGGAAGGATGAACTAG 58.812 47.826 0.00 0.00 32.95 2.57
2952 3525 4.323104 GCACTTGAGGAAGGATGAACTAGT 60.323 45.833 0.00 0.00 32.95 2.57
2953 3526 5.105310 GCACTTGAGGAAGGATGAACTAGTA 60.105 44.000 0.00 0.00 32.95 1.82
2954 3527 6.334202 CACTTGAGGAAGGATGAACTAGTAC 58.666 44.000 0.00 0.00 32.95 2.73
2955 3528 6.153680 CACTTGAGGAAGGATGAACTAGTACT 59.846 42.308 0.00 0.00 32.95 2.73
2956 3529 7.339721 CACTTGAGGAAGGATGAACTAGTACTA 59.660 40.741 1.89 1.89 32.95 1.82
2957 3530 7.339976 ACTTGAGGAAGGATGAACTAGTACTAC 59.660 40.741 0.00 0.00 32.95 2.73
2958 3531 6.728411 TGAGGAAGGATGAACTAGTACTACA 58.272 40.000 0.00 0.00 0.00 2.74
2959 3532 7.355101 TGAGGAAGGATGAACTAGTACTACAT 58.645 38.462 0.00 1.28 0.00 2.29
2960 3533 7.285629 TGAGGAAGGATGAACTAGTACTACATG 59.714 40.741 8.73 0.00 0.00 3.21
2961 3534 6.041069 AGGAAGGATGAACTAGTACTACATGC 59.959 42.308 12.71 12.71 0.00 4.06
2962 3535 6.183360 GGAAGGATGAACTAGTACTACATGCA 60.183 42.308 19.07 8.67 33.13 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.038161 CACTGTTTTTCACTAGTTGATGGACA 59.962 38.462 0.00 0.00 32.84 4.02
3 4 6.377327 ACACTGTTTTTCACTAGTTGATGG 57.623 37.500 0.00 0.00 32.84 3.51
4 5 8.142994 AGTACACTGTTTTTCACTAGTTGATG 57.857 34.615 0.00 0.00 32.84 3.07
5 6 9.826574 TTAGTACACTGTTTTTCACTAGTTGAT 57.173 29.630 0.00 0.00 32.84 2.57
6 7 9.656040 TTTAGTACACTGTTTTTCACTAGTTGA 57.344 29.630 0.00 0.00 0.00 3.18
7 8 9.698617 GTTTAGTACACTGTTTTTCACTAGTTG 57.301 33.333 0.00 0.00 0.00 3.16
8 9 9.439500 TGTTTAGTACACTGTTTTTCACTAGTT 57.561 29.630 0.00 0.00 0.00 2.24
9 10 9.609346 ATGTTTAGTACACTGTTTTTCACTAGT 57.391 29.630 0.00 0.00 40.19 2.57
12 13 9.783256 GAAATGTTTAGTACACTGTTTTTCACT 57.217 29.630 0.00 0.00 40.19 3.41
13 14 9.783256 AGAAATGTTTAGTACACTGTTTTTCAC 57.217 29.630 0.00 0.00 40.19 3.18
20 21 9.826574 TGTTTCTAGAAATGTTTAGTACACTGT 57.173 29.630 20.41 0.00 40.19 3.55
41 42 7.638134 TGCTTGCCAATTAAGAAAAATGTTTC 58.362 30.769 0.00 0.00 43.05 2.78
42 43 7.565323 TGCTTGCCAATTAAGAAAAATGTTT 57.435 28.000 0.00 0.00 0.00 2.83
43 44 7.748691 ATGCTTGCCAATTAAGAAAAATGTT 57.251 28.000 0.00 0.00 0.00 2.71
44 45 7.748691 AATGCTTGCCAATTAAGAAAAATGT 57.251 28.000 0.00 0.00 0.00 2.71
87 88 7.448748 AGCTGGTAACGAATCTTATGTTTTT 57.551 32.000 0.00 0.00 42.51 1.94
88 89 7.174253 TCAAGCTGGTAACGAATCTTATGTTTT 59.826 33.333 0.00 0.00 42.51 2.43
89 90 6.653320 TCAAGCTGGTAACGAATCTTATGTTT 59.347 34.615 0.00 0.00 42.51 2.83
90 91 6.170506 TCAAGCTGGTAACGAATCTTATGTT 58.829 36.000 0.00 0.00 42.51 2.71
91 92 5.730550 TCAAGCTGGTAACGAATCTTATGT 58.269 37.500 0.00 0.00 42.51 2.29
92 93 5.812642 ACTCAAGCTGGTAACGAATCTTATG 59.187 40.000 0.00 0.00 42.51 1.90
93 94 5.978814 ACTCAAGCTGGTAACGAATCTTAT 58.021 37.500 0.00 0.00 42.51 1.73
94 95 5.401531 ACTCAAGCTGGTAACGAATCTTA 57.598 39.130 0.00 0.00 42.51 2.10
95 96 4.273148 ACTCAAGCTGGTAACGAATCTT 57.727 40.909 0.00 0.00 42.51 2.40
96 97 3.963428 ACTCAAGCTGGTAACGAATCT 57.037 42.857 0.00 0.00 42.51 2.40
97 98 4.246458 AGAACTCAAGCTGGTAACGAATC 58.754 43.478 0.00 0.00 42.51 2.52
98 99 4.273148 AGAACTCAAGCTGGTAACGAAT 57.727 40.909 0.00 0.00 42.51 3.34
99 100 3.746045 AGAACTCAAGCTGGTAACGAA 57.254 42.857 0.00 0.00 42.51 3.85
100 101 3.746045 AAGAACTCAAGCTGGTAACGA 57.254 42.857 0.00 0.00 42.51 3.85
101 102 4.557205 ACTAAGAACTCAAGCTGGTAACG 58.443 43.478 0.00 0.00 42.51 3.18
102 103 4.621886 CGACTAAGAACTCAAGCTGGTAAC 59.378 45.833 0.00 0.00 0.00 2.50
103 104 4.321750 CCGACTAAGAACTCAAGCTGGTAA 60.322 45.833 0.00 0.00 0.00 2.85
104 105 3.192844 CCGACTAAGAACTCAAGCTGGTA 59.807 47.826 0.00 0.00 0.00 3.25
105 106 2.028930 CCGACTAAGAACTCAAGCTGGT 60.029 50.000 0.00 0.00 0.00 4.00
106 107 2.611518 CCGACTAAGAACTCAAGCTGG 58.388 52.381 0.00 0.00 0.00 4.85
107 108 1.996191 GCCGACTAAGAACTCAAGCTG 59.004 52.381 0.00 0.00 0.00 4.24
108 109 1.618837 TGCCGACTAAGAACTCAAGCT 59.381 47.619 0.00 0.00 0.00 3.74
109 110 1.727335 GTGCCGACTAAGAACTCAAGC 59.273 52.381 0.00 0.00 0.00 4.01
110 111 3.026630 TGTGCCGACTAAGAACTCAAG 57.973 47.619 0.00 0.00 0.00 3.02
111 112 3.325870 CATGTGCCGACTAAGAACTCAA 58.674 45.455 0.00 0.00 0.00 3.02
112 113 2.353704 CCATGTGCCGACTAAGAACTCA 60.354 50.000 0.00 0.00 0.00 3.41
113 114 2.271800 CCATGTGCCGACTAAGAACTC 58.728 52.381 0.00 0.00 0.00 3.01
114 115 1.676014 GCCATGTGCCGACTAAGAACT 60.676 52.381 0.00 0.00 0.00 3.01
115 116 0.727398 GCCATGTGCCGACTAAGAAC 59.273 55.000 0.00 0.00 0.00 3.01
116 117 0.739462 CGCCATGTGCCGACTAAGAA 60.739 55.000 0.00 0.00 36.24 2.52
117 118 1.153647 CGCCATGTGCCGACTAAGA 60.154 57.895 0.00 0.00 36.24 2.10
118 119 2.173669 CCGCCATGTGCCGACTAAG 61.174 63.158 0.00 0.00 36.24 2.18
119 120 2.125310 CCGCCATGTGCCGACTAA 60.125 61.111 0.00 0.00 36.24 2.24
120 121 4.155733 CCCGCCATGTGCCGACTA 62.156 66.667 0.00 0.00 36.24 2.59
128 129 3.342668 TATGCACAGCCCGCCATGT 62.343 57.895 0.00 0.00 0.00 3.21
129 130 2.516695 TATGCACAGCCCGCCATG 60.517 61.111 0.00 0.00 0.00 3.66
130 131 2.203252 CTATGCACAGCCCGCCAT 60.203 61.111 0.00 0.00 0.00 4.40
132 133 4.864334 AGCTATGCACAGCCCGCC 62.864 66.667 14.65 0.00 42.84 6.13
133 134 3.275338 GAGCTATGCACAGCCCGC 61.275 66.667 14.65 0.00 42.84 6.13
134 135 0.033920 TATGAGCTATGCACAGCCCG 59.966 55.000 14.65 0.00 42.84 6.13
135 136 2.027377 AGATATGAGCTATGCACAGCCC 60.027 50.000 14.65 1.20 42.84 5.19
136 137 3.001414 CAGATATGAGCTATGCACAGCC 58.999 50.000 14.65 5.91 42.84 4.85
137 138 3.679025 GTCAGATATGAGCTATGCACAGC 59.321 47.826 9.52 9.52 42.12 4.40
138 139 3.919197 CGTCAGATATGAGCTATGCACAG 59.081 47.826 0.00 0.00 32.12 3.66
139 140 3.858503 GCGTCAGATATGAGCTATGCACA 60.859 47.826 0.00 0.00 33.26 4.57
140 141 2.665537 GCGTCAGATATGAGCTATGCAC 59.334 50.000 0.00 0.00 0.00 4.57
141 142 2.297033 TGCGTCAGATATGAGCTATGCA 59.703 45.455 11.32 0.00 0.00 3.96
142 143 2.951726 TGCGTCAGATATGAGCTATGC 58.048 47.619 11.32 3.49 0.00 3.14
143 144 4.492611 ACATGCGTCAGATATGAGCTATG 58.507 43.478 11.32 13.23 0.00 2.23
144 145 4.673841 CGACATGCGTCAGATATGAGCTAT 60.674 45.833 11.32 3.65 42.74 2.97
145 146 3.365364 CGACATGCGTCAGATATGAGCTA 60.365 47.826 11.32 1.99 42.74 3.32
146 147 2.606551 CGACATGCGTCAGATATGAGCT 60.607 50.000 11.32 0.00 42.74 4.09
147 148 1.718178 CGACATGCGTCAGATATGAGC 59.282 52.381 0.00 0.00 42.74 4.26
148 149 3.232771 CTCGACATGCGTCAGATATGAG 58.767 50.000 8.91 0.00 42.74 2.90
149 150 2.605580 GCTCGACATGCGTCAGATATGA 60.606 50.000 8.91 0.00 42.74 2.15
150 151 1.718178 GCTCGACATGCGTCAGATATG 59.282 52.381 8.91 0.00 42.74 1.78
151 152 1.611006 AGCTCGACATGCGTCAGATAT 59.389 47.619 8.91 0.00 42.74 1.63
152 153 1.025041 AGCTCGACATGCGTCAGATA 58.975 50.000 8.91 0.00 42.74 1.98
153 154 0.527169 CAGCTCGACATGCGTCAGAT 60.527 55.000 8.91 0.00 42.74 2.90
154 155 1.153958 CAGCTCGACATGCGTCAGA 60.154 57.895 8.91 0.00 42.74 3.27
155 156 0.733909 TTCAGCTCGACATGCGTCAG 60.734 55.000 8.91 2.76 42.74 3.51
156 157 0.108662 ATTCAGCTCGACATGCGTCA 60.109 50.000 8.91 0.00 42.74 4.35
157 158 1.002366 AATTCAGCTCGACATGCGTC 58.998 50.000 8.91 3.92 41.80 5.19
158 159 1.002366 GAATTCAGCTCGACATGCGT 58.998 50.000 0.00 0.00 41.80 5.24
159 160 0.302890 GGAATTCAGCTCGACATGCG 59.697 55.000 7.93 0.00 42.69 4.73
160 161 1.372582 TGGAATTCAGCTCGACATGC 58.627 50.000 7.93 0.00 0.00 4.06
161 162 2.223203 GCTTGGAATTCAGCTCGACATG 60.223 50.000 7.93 0.00 0.00 3.21
162 163 2.012673 GCTTGGAATTCAGCTCGACAT 58.987 47.619 7.93 0.00 0.00 3.06
163 164 1.270785 TGCTTGGAATTCAGCTCGACA 60.271 47.619 16.25 0.00 0.00 4.35
164 165 1.442769 TGCTTGGAATTCAGCTCGAC 58.557 50.000 16.25 0.00 0.00 4.20
165 166 2.408271 ATGCTTGGAATTCAGCTCGA 57.592 45.000 16.25 0.39 0.00 4.04
166 167 2.938451 TGTATGCTTGGAATTCAGCTCG 59.062 45.455 16.25 0.00 0.00 5.03
167 168 5.511234 AATGTATGCTTGGAATTCAGCTC 57.489 39.130 16.25 9.10 0.00 4.09
168 169 6.125029 ACTAATGTATGCTTGGAATTCAGCT 58.875 36.000 16.25 7.00 0.00 4.24
169 170 6.382869 ACTAATGTATGCTTGGAATTCAGC 57.617 37.500 7.93 9.20 0.00 4.26
177 178 9.601217 GGGAGTATTATACTAATGTATGCTTGG 57.399 37.037 4.71 0.00 39.59 3.61
180 181 9.203163 GGAGGGAGTATTATACTAATGTATGCT 57.797 37.037 4.71 0.00 39.59 3.79
181 182 8.978472 TGGAGGGAGTATTATACTAATGTATGC 58.022 37.037 4.71 0.00 39.59 3.14
185 186 9.047947 GGAATGGAGGGAGTATTATACTAATGT 57.952 37.037 4.71 0.00 39.59 2.71
186 187 9.046846 TGGAATGGAGGGAGTATTATACTAATG 57.953 37.037 4.71 0.00 39.59 1.90
187 188 9.805204 ATGGAATGGAGGGAGTATTATACTAAT 57.195 33.333 4.71 0.00 39.59 1.73
190 191 9.805204 ATTATGGAATGGAGGGAGTATTATACT 57.195 33.333 4.35 4.35 42.86 2.12
191 192 9.838339 CATTATGGAATGGAGGGAGTATTATAC 57.162 37.037 0.00 0.00 39.10 1.47
192 193 9.574577 ACATTATGGAATGGAGGGAGTATTATA 57.425 33.333 0.00 0.00 45.83 0.98
193 194 8.468547 ACATTATGGAATGGAGGGAGTATTAT 57.531 34.615 0.00 0.00 45.83 1.28
194 195 7.888514 ACATTATGGAATGGAGGGAGTATTA 57.111 36.000 0.00 0.00 45.83 0.98
195 196 6.786843 ACATTATGGAATGGAGGGAGTATT 57.213 37.500 0.00 0.00 45.83 1.89
196 197 7.502060 CTACATTATGGAATGGAGGGAGTAT 57.498 40.000 2.44 0.00 46.58 2.12
197 198 6.935240 CTACATTATGGAATGGAGGGAGTA 57.065 41.667 2.44 0.00 46.58 2.59
198 199 5.832539 CTACATTATGGAATGGAGGGAGT 57.167 43.478 2.44 0.00 46.58 3.85
279 280 9.733556 TGTTTGGTATTGTAGATGTAGACAATT 57.266 29.630 5.64 0.00 42.27 2.32
280 281 9.905713 ATGTTTGGTATTGTAGATGTAGACAAT 57.094 29.630 5.65 5.65 45.74 2.71
281 282 9.161629 CATGTTTGGTATTGTAGATGTAGACAA 57.838 33.333 0.00 0.00 39.74 3.18
282 283 8.318412 ACATGTTTGGTATTGTAGATGTAGACA 58.682 33.333 0.00 0.00 0.00 3.41
283 284 8.718102 ACATGTTTGGTATTGTAGATGTAGAC 57.282 34.615 0.00 0.00 0.00 2.59
313 314 9.692749 GGATACATCGTGAGTTATATTTTCAGA 57.307 33.333 0.00 0.00 0.00 3.27
314 315 9.476202 TGGATACATCGTGAGTTATATTTTCAG 57.524 33.333 0.00 0.00 46.17 3.02
334 335 3.701040 ACCAAATGCACCTCATTGGATAC 59.299 43.478 18.38 0.00 44.23 2.24
335 336 3.979911 ACCAAATGCACCTCATTGGATA 58.020 40.909 18.38 0.00 44.23 2.59
336 337 2.823959 ACCAAATGCACCTCATTGGAT 58.176 42.857 18.38 5.67 44.23 3.41
337 338 2.307496 ACCAAATGCACCTCATTGGA 57.693 45.000 18.38 0.00 44.23 3.53
338 339 4.403432 AGAATACCAAATGCACCTCATTGG 59.597 41.667 12.75 12.75 44.23 3.16
339 340 5.587388 AGAATACCAAATGCACCTCATTG 57.413 39.130 0.00 0.00 44.23 2.82
340 341 6.662755 TCTAGAATACCAAATGCACCTCATT 58.337 36.000 0.00 0.00 46.82 2.57
341 342 6.252599 TCTAGAATACCAAATGCACCTCAT 57.747 37.500 0.00 0.00 36.87 2.90
342 343 5.692115 TCTAGAATACCAAATGCACCTCA 57.308 39.130 0.00 0.00 0.00 3.86
343 344 9.372369 GTATATCTAGAATACCAAATGCACCTC 57.628 37.037 0.00 0.00 0.00 3.85
344 345 8.322091 GGTATATCTAGAATACCAAATGCACCT 58.678 37.037 24.49 0.00 45.54 4.00
345 346 8.494016 GGTATATCTAGAATACCAAATGCACC 57.506 38.462 24.49 9.01 45.54 5.01
368 369 9.656323 TGACCATGTATATAGAGAAAAGTAGGT 57.344 33.333 0.00 0.00 0.00 3.08
386 387 8.825745 GTCAAACATTACAAATTTTGACCATGT 58.174 29.630 15.81 14.92 46.37 3.21
392 393 9.868277 ACAGAAGTCAAACATTACAAATTTTGA 57.132 25.926 15.81 0.00 35.98 2.69
406 407 9.989869 GCCTATAGATTTTTACAGAAGTCAAAC 57.010 33.333 0.00 0.00 0.00 2.93
407 408 9.733556 TGCCTATAGATTTTTACAGAAGTCAAA 57.266 29.630 0.00 0.00 0.00 2.69
408 409 9.162764 GTGCCTATAGATTTTTACAGAAGTCAA 57.837 33.333 0.00 0.00 0.00 3.18
409 410 8.540388 AGTGCCTATAGATTTTTACAGAAGTCA 58.460 33.333 0.00 0.00 0.00 3.41
410 411 8.950208 AGTGCCTATAGATTTTTACAGAAGTC 57.050 34.615 0.00 0.00 0.00 3.01
411 412 9.819267 GTAGTGCCTATAGATTTTTACAGAAGT 57.181 33.333 0.00 0.00 0.00 3.01
412 413 9.817809 TGTAGTGCCTATAGATTTTTACAGAAG 57.182 33.333 0.00 0.00 0.00 2.85
422 423 9.424319 CGTTTCATAATGTAGTGCCTATAGATT 57.576 33.333 0.00 0.00 0.00 2.40
423 424 8.035394 CCGTTTCATAATGTAGTGCCTATAGAT 58.965 37.037 0.00 0.00 0.00 1.98
424 425 7.231925 TCCGTTTCATAATGTAGTGCCTATAGA 59.768 37.037 0.00 0.00 0.00 1.98
425 426 7.375834 TCCGTTTCATAATGTAGTGCCTATAG 58.624 38.462 0.00 0.00 0.00 1.31
426 427 7.292713 TCCGTTTCATAATGTAGTGCCTATA 57.707 36.000 0.00 0.00 0.00 1.31
427 428 6.169557 TCCGTTTCATAATGTAGTGCCTAT 57.830 37.500 0.00 0.00 0.00 2.57
428 429 5.452776 CCTCCGTTTCATAATGTAGTGCCTA 60.453 44.000 0.00 0.00 0.00 3.93
429 430 4.442706 CTCCGTTTCATAATGTAGTGCCT 58.557 43.478 0.00 0.00 0.00 4.75
430 431 3.560068 CCTCCGTTTCATAATGTAGTGCC 59.440 47.826 0.00 0.00 0.00 5.01
431 432 3.560068 CCCTCCGTTTCATAATGTAGTGC 59.440 47.826 0.00 0.00 0.00 4.40
432 433 5.018539 TCCCTCCGTTTCATAATGTAGTG 57.981 43.478 0.00 0.00 0.00 2.74
433 434 4.715297 ACTCCCTCCGTTTCATAATGTAGT 59.285 41.667 0.00 0.00 0.00 2.73
434 435 5.277857 ACTCCCTCCGTTTCATAATGTAG 57.722 43.478 0.00 0.00 0.00 2.74
435 436 6.381994 ACTTACTCCCTCCGTTTCATAATGTA 59.618 38.462 0.00 0.00 0.00 2.29
436 437 5.189145 ACTTACTCCCTCCGTTTCATAATGT 59.811 40.000 0.00 0.00 0.00 2.71
437 438 5.671493 ACTTACTCCCTCCGTTTCATAATG 58.329 41.667 0.00 0.00 0.00 1.90
438 439 5.952347 ACTTACTCCCTCCGTTTCATAAT 57.048 39.130 0.00 0.00 0.00 1.28
439 440 6.438425 AGTTACTTACTCCCTCCGTTTCATAA 59.562 38.462 0.00 0.00 28.23 1.90
440 441 5.954150 AGTTACTTACTCCCTCCGTTTCATA 59.046 40.000 0.00 0.00 28.23 2.15
441 442 4.776308 AGTTACTTACTCCCTCCGTTTCAT 59.224 41.667 0.00 0.00 28.23 2.57
442 443 4.021719 CAGTTACTTACTCCCTCCGTTTCA 60.022 45.833 0.00 0.00 33.85 2.69
443 444 4.021632 ACAGTTACTTACTCCCTCCGTTTC 60.022 45.833 0.00 0.00 33.85 2.78
444 445 3.899980 ACAGTTACTTACTCCCTCCGTTT 59.100 43.478 0.00 0.00 33.85 3.60
445 446 3.504375 ACAGTTACTTACTCCCTCCGTT 58.496 45.455 0.00 0.00 33.85 4.44
446 447 3.166560 ACAGTTACTTACTCCCTCCGT 57.833 47.619 0.00 0.00 33.85 4.69
447 448 4.021719 TCAAACAGTTACTTACTCCCTCCG 60.022 45.833 0.00 0.00 33.85 4.63
448 449 5.236282 GTCAAACAGTTACTTACTCCCTCC 58.764 45.833 0.00 0.00 33.85 4.30
449 450 5.221581 TGGTCAAACAGTTACTTACTCCCTC 60.222 44.000 0.00 0.00 33.85 4.30
450 451 4.657039 TGGTCAAACAGTTACTTACTCCCT 59.343 41.667 0.00 0.00 33.85 4.20
451 452 4.964593 TGGTCAAACAGTTACTTACTCCC 58.035 43.478 0.00 0.00 33.85 4.30
452 453 5.469084 CCTTGGTCAAACAGTTACTTACTCC 59.531 44.000 0.00 0.00 33.85 3.85
453 454 6.053650 ACCTTGGTCAAACAGTTACTTACTC 58.946 40.000 0.00 0.00 33.85 2.59
454 455 5.997843 ACCTTGGTCAAACAGTTACTTACT 58.002 37.500 0.00 0.00 37.68 2.24
455 456 6.688637 AACCTTGGTCAAACAGTTACTTAC 57.311 37.500 0.00 0.00 0.00 2.34
487 488 6.382608 TCGTGCTGCTAGTAGAAATATCATC 58.617 40.000 12.54 0.00 0.00 2.92
490 491 6.090088 CCATTCGTGCTGCTAGTAGAAATATC 59.910 42.308 12.54 0.00 0.00 1.63
498 499 0.179084 GGCCATTCGTGCTGCTAGTA 60.179 55.000 0.00 0.00 0.00 1.82
513 515 3.364442 CATCTTTTGCACGGGCCA 58.636 55.556 7.46 0.00 40.13 5.36
531 533 1.004610 CGAATGTACAGAGCCATTGCG 60.005 52.381 0.33 0.00 44.33 4.85
541 543 1.009829 GCCTTCCTGCGAATGTACAG 58.990 55.000 0.33 0.00 0.00 2.74
657 659 1.377202 GAAGCATCCAACTGGCGGA 60.377 57.895 0.00 0.00 36.84 5.54
720 726 1.721487 CCGTTTCGATGGTGATGCC 59.279 57.895 0.00 0.00 37.90 4.40
767 963 4.785453 CAGCGAGGGAACAGGGCC 62.785 72.222 0.00 0.00 0.00 5.80
768 964 3.672295 CTCAGCGAGGGAACAGGGC 62.672 68.421 0.00 0.00 0.00 5.19
769 965 1.954362 CTCTCAGCGAGGGAACAGGG 61.954 65.000 0.00 0.00 36.06 4.45
772 968 1.599606 GCTCTCTCAGCGAGGGAACA 61.600 60.000 9.01 0.00 43.32 3.18
773 969 1.140804 GCTCTCTCAGCGAGGGAAC 59.859 63.158 9.01 2.27 43.32 3.62
774 970 3.609703 GCTCTCTCAGCGAGGGAA 58.390 61.111 9.01 0.00 43.32 3.97
782 978 1.480137 CTAGTGGTTGGGCTCTCTCAG 59.520 57.143 0.00 0.00 0.00 3.35
783 979 1.203187 ACTAGTGGTTGGGCTCTCTCA 60.203 52.381 0.00 0.00 0.00 3.27
784 980 1.562783 ACTAGTGGTTGGGCTCTCTC 58.437 55.000 0.00 0.00 0.00 3.20
785 981 2.031495 AACTAGTGGTTGGGCTCTCT 57.969 50.000 0.00 0.00 36.70 3.10
833 1031 1.232119 GGAGCGAGTCTAGTCTAGGC 58.768 60.000 3.06 3.06 0.00 3.93
836 1034 0.473326 GGGGGAGCGAGTCTAGTCTA 59.527 60.000 0.00 0.00 0.00 2.59
837 1035 1.227946 GGGGGAGCGAGTCTAGTCT 59.772 63.158 0.00 0.00 0.00 3.24
838 1036 3.844741 GGGGGAGCGAGTCTAGTC 58.155 66.667 0.00 0.00 0.00 2.59
853 1051 1.035385 GGCACGGTATTTGAAGGGGG 61.035 60.000 0.00 0.00 0.00 5.40
854 1052 0.322997 TGGCACGGTATTTGAAGGGG 60.323 55.000 0.00 0.00 0.00 4.79
855 1053 0.808755 GTGGCACGGTATTTGAAGGG 59.191 55.000 0.00 0.00 0.00 3.95
856 1054 0.808755 GGTGGCACGGTATTTGAAGG 59.191 55.000 12.17 0.00 0.00 3.46
883 1081 0.545646 AGAGAAGCAATGGAGGAGGC 59.454 55.000 0.00 0.00 0.00 4.70
897 1095 5.015178 AGAGGAAGAAGAGAGGAGAAGAGAA 59.985 44.000 0.00 0.00 0.00 2.87
898 1096 4.540099 AGAGGAAGAAGAGAGGAGAAGAGA 59.460 45.833 0.00 0.00 0.00 3.10
899 1097 4.860022 AGAGGAAGAAGAGAGGAGAAGAG 58.140 47.826 0.00 0.00 0.00 2.85
900 1098 4.540099 AGAGAGGAAGAAGAGAGGAGAAGA 59.460 45.833 0.00 0.00 0.00 2.87
901 1099 4.860022 AGAGAGGAAGAAGAGAGGAGAAG 58.140 47.826 0.00 0.00 0.00 2.85
931 1129 4.827087 ATGGCTGACGGCGCTCTG 62.827 66.667 6.90 9.23 42.94 3.35
932 1130 4.521062 GATGGCTGACGGCGCTCT 62.521 66.667 6.90 0.00 42.94 4.09
966 1164 3.550437 AGTCTCAGCAACAAAGTGACT 57.450 42.857 0.00 0.00 32.94 3.41
967 1165 3.623060 TCAAGTCTCAGCAACAAAGTGAC 59.377 43.478 0.00 0.00 0.00 3.67
979 1177 0.108898 CTGCCCGTCTCAAGTCTCAG 60.109 60.000 0.00 0.00 0.00 3.35
982 1180 1.066573 CATTCTGCCCGTCTCAAGTCT 60.067 52.381 0.00 0.00 0.00 3.24
1197 1395 4.537433 ATGAAGCGCGAGGAGGCC 62.537 66.667 12.10 0.00 0.00 5.19
1198 1396 2.914777 AAGATGAAGCGCGAGGAGGC 62.915 60.000 12.10 0.00 0.00 4.70
1560 1764 1.304962 GGTGGGGAACATGGGGAAC 60.305 63.158 0.00 0.00 0.00 3.62
1561 1765 1.372245 TTGGTGGGGAACATGGGGAA 61.372 55.000 0.00 0.00 0.00 3.97
1562 1766 1.780488 TTGGTGGGGAACATGGGGA 60.780 57.895 0.00 0.00 0.00 4.81
1563 1767 1.609210 GTTGGTGGGGAACATGGGG 60.609 63.158 0.00 0.00 0.00 4.96
1564 1768 1.976474 CGTTGGTGGGGAACATGGG 60.976 63.158 0.00 0.00 0.00 4.00
1565 1769 1.228429 ACGTTGGTGGGGAACATGG 60.228 57.895 0.00 0.00 0.00 3.66
1566 1770 1.241315 GGACGTTGGTGGGGAACATG 61.241 60.000 0.00 0.00 0.00 3.21
1567 1771 1.074248 GGACGTTGGTGGGGAACAT 59.926 57.895 0.00 0.00 0.00 2.71
1568 1772 2.047213 GAGGACGTTGGTGGGGAACA 62.047 60.000 0.00 0.00 0.00 3.18
2046 2271 8.619281 AGAAAAGAGAATTAAAGGGGAGAAGAT 58.381 33.333 0.00 0.00 0.00 2.40
2053 2279 8.642935 AGAAGAAGAAAAGAGAATTAAAGGGG 57.357 34.615 0.00 0.00 0.00 4.79
2060 2286 8.563732 CGGAAAAGAGAAGAAGAAAAGAGAATT 58.436 33.333 0.00 0.00 0.00 2.17
2061 2287 7.308288 GCGGAAAAGAGAAGAAGAAAAGAGAAT 60.308 37.037 0.00 0.00 0.00 2.40
2064 2290 5.334491 GGCGGAAAAGAGAAGAAGAAAAGAG 60.334 44.000 0.00 0.00 0.00 2.85
2065 2291 4.515567 GGCGGAAAAGAGAAGAAGAAAAGA 59.484 41.667 0.00 0.00 0.00 2.52
2066 2292 4.275936 TGGCGGAAAAGAGAAGAAGAAAAG 59.724 41.667 0.00 0.00 0.00 2.27
2067 2293 4.204012 TGGCGGAAAAGAGAAGAAGAAAA 58.796 39.130 0.00 0.00 0.00 2.29
2187 2420 6.488344 TCAACATTGTACTATGAACAAAGCCA 59.512 34.615 21.70 0.00 40.05 4.75
2188 2421 6.908825 TCAACATTGTACTATGAACAAAGCC 58.091 36.000 21.70 0.00 40.05 4.35
2192 2425 9.671279 ATCTCATCAACATTGTACTATGAACAA 57.329 29.630 21.70 6.60 40.85 2.83
2201 2434 6.674694 AGAGCAATCTCATCAACATTGTAC 57.325 37.500 0.00 0.00 41.81 2.90
2204 2437 6.438259 AGAAGAGCAATCTCATCAACATTG 57.562 37.500 1.28 0.00 41.81 2.82
2206 2439 6.887013 AGTAGAAGAGCAATCTCATCAACAT 58.113 36.000 1.28 0.00 41.81 2.71
2209 2442 7.123997 AGAGAAGTAGAAGAGCAATCTCATCAA 59.876 37.037 0.00 0.00 41.81 2.57
2211 2444 6.919662 CAGAGAAGTAGAAGAGCAATCTCATC 59.080 42.308 0.00 0.00 41.81 2.92
2213 2446 5.126869 CCAGAGAAGTAGAAGAGCAATCTCA 59.873 44.000 0.00 0.00 41.81 3.27
2214 2447 5.359576 TCCAGAGAAGTAGAAGAGCAATCTC 59.640 44.000 0.00 0.00 39.65 2.75
2215 2448 5.268387 TCCAGAGAAGTAGAAGAGCAATCT 58.732 41.667 0.00 0.00 0.00 2.40
2216 2449 5.359576 TCTCCAGAGAAGTAGAAGAGCAATC 59.640 44.000 0.00 0.00 33.91 2.67
2218 2451 4.461081 GTCTCCAGAGAAGTAGAAGAGCAA 59.539 45.833 0.00 0.00 39.48 3.91
2219 2452 4.013728 GTCTCCAGAGAAGTAGAAGAGCA 58.986 47.826 0.00 0.00 39.48 4.26
2220 2453 3.380320 GGTCTCCAGAGAAGTAGAAGAGC 59.620 52.174 0.00 0.00 39.48 4.09
2221 2454 4.594970 TGGTCTCCAGAGAAGTAGAAGAG 58.405 47.826 0.00 0.00 39.48 2.85
2222 2455 4.659529 TGGTCTCCAGAGAAGTAGAAGA 57.340 45.455 0.00 0.00 39.48 2.87
2235 2468 3.055602 CACATTCATCTCACTGGTCTCCA 60.056 47.826 0.00 0.00 0.00 3.86
2236 2469 3.055530 ACACATTCATCTCACTGGTCTCC 60.056 47.826 0.00 0.00 0.00 3.71
2237 2470 4.199432 ACACATTCATCTCACTGGTCTC 57.801 45.455 0.00 0.00 0.00 3.36
2238 2471 4.630644 AACACATTCATCTCACTGGTCT 57.369 40.909 0.00 0.00 0.00 3.85
2239 2472 4.756642 TCAAACACATTCATCTCACTGGTC 59.243 41.667 0.00 0.00 0.00 4.02
2240 2473 4.717877 TCAAACACATTCATCTCACTGGT 58.282 39.130 0.00 0.00 0.00 4.00
2241 2474 4.758674 ACTCAAACACATTCATCTCACTGG 59.241 41.667 0.00 0.00 0.00 4.00
2242 2475 5.936686 ACTCAAACACATTCATCTCACTG 57.063 39.130 0.00 0.00 0.00 3.66
2243 2476 6.057533 TCAACTCAAACACATTCATCTCACT 58.942 36.000 0.00 0.00 0.00 3.41
2244 2477 6.304356 TCAACTCAAACACATTCATCTCAC 57.696 37.500 0.00 0.00 0.00 3.51
2245 2478 6.543465 AGTTCAACTCAAACACATTCATCTCA 59.457 34.615 0.00 0.00 0.00 3.27
2246 2479 6.963796 AGTTCAACTCAAACACATTCATCTC 58.036 36.000 0.00 0.00 0.00 2.75
2247 2480 6.949352 AGTTCAACTCAAACACATTCATCT 57.051 33.333 0.00 0.00 0.00 2.90
2261 2494 4.378253 GCATGAAGAAGCAGAGTTCAACTC 60.378 45.833 9.78 9.78 45.38 3.01
2286 2519 2.270257 GGCAATGTGCTGCTGGTGA 61.270 57.895 0.00 0.00 44.28 4.02
2287 2520 2.260434 GGCAATGTGCTGCTGGTG 59.740 61.111 0.00 0.00 44.28 4.17
2288 2521 2.203523 TGGCAATGTGCTGCTGGT 60.204 55.556 0.00 0.00 44.28 4.00
2289 2522 1.884075 ATGTGGCAATGTGCTGCTGG 61.884 55.000 0.00 0.00 44.28 4.85
2290 2523 0.037697 AATGTGGCAATGTGCTGCTG 60.038 50.000 0.00 0.00 44.28 4.41
2291 2524 0.245539 GAATGTGGCAATGTGCTGCT 59.754 50.000 0.00 0.00 44.28 4.24
2292 2525 0.038067 TGAATGTGGCAATGTGCTGC 60.038 50.000 0.00 0.00 44.28 5.25
2293 2526 2.536365 GATGAATGTGGCAATGTGCTG 58.464 47.619 0.00 0.00 44.28 4.41
2294 2527 1.479323 GGATGAATGTGGCAATGTGCT 59.521 47.619 0.00 0.00 44.28 4.40
2295 2528 1.205179 TGGATGAATGTGGCAATGTGC 59.795 47.619 0.00 0.00 44.08 4.57
2296 2529 2.417651 GGTGGATGAATGTGGCAATGTG 60.418 50.000 0.00 0.00 0.00 3.21
2297 2530 1.826720 GGTGGATGAATGTGGCAATGT 59.173 47.619 0.00 0.00 0.00 2.71
2298 2531 1.826096 TGGTGGATGAATGTGGCAATG 59.174 47.619 0.00 0.00 0.00 2.82
2305 2538 0.994247 TGGAGCTGGTGGATGAATGT 59.006 50.000 0.00 0.00 0.00 2.71
2339 2588 3.699538 ACAAGTACAGTCAGTCACAGACA 59.300 43.478 2.83 0.00 38.46 3.41
2342 2591 4.307443 TCACAAGTACAGTCAGTCACAG 57.693 45.455 0.00 0.00 0.00 3.66
2344 2593 6.678878 TCTAATCACAAGTACAGTCAGTCAC 58.321 40.000 0.00 0.00 0.00 3.67
2372 2623 8.866956 ACTTCTTAACTCGGTCGTAATAATTTG 58.133 33.333 0.00 0.00 0.00 2.32
2395 2646 1.204941 CCAGCTGCGGAACTACTACTT 59.795 52.381 8.66 0.00 0.00 2.24
2396 2647 0.818296 CCAGCTGCGGAACTACTACT 59.182 55.000 8.66 0.00 0.00 2.57
2397 2648 0.815734 TCCAGCTGCGGAACTACTAC 59.184 55.000 8.66 0.00 29.93 2.73
2398 2649 1.476891 CTTCCAGCTGCGGAACTACTA 59.523 52.381 17.70 2.39 40.20 1.82
2399 2650 0.247736 CTTCCAGCTGCGGAACTACT 59.752 55.000 17.70 0.00 40.20 2.57
2400 2651 0.741221 CCTTCCAGCTGCGGAACTAC 60.741 60.000 17.70 0.00 40.20 2.73
2407 2658 0.392193 ATTGTCTCCTTCCAGCTGCG 60.392 55.000 8.66 1.56 0.00 5.18
2453 2704 1.012841 CTTTTCTCCCTCGCTGATGC 58.987 55.000 0.00 0.00 0.00 3.91
2460 2712 0.176910 GCTCCTCCTTTTCTCCCTCG 59.823 60.000 0.00 0.00 0.00 4.63
2461 2713 1.280457 TGCTCCTCCTTTTCTCCCTC 58.720 55.000 0.00 0.00 0.00 4.30
2538 2794 1.875963 CTTTCCTCACGCGGCATTT 59.124 52.632 12.47 0.00 0.00 2.32
2559 2945 4.641645 TGCAGTGCCGGGTTGAGG 62.642 66.667 13.72 0.00 0.00 3.86
2589 2975 4.379243 AACTCGTGAGGCCGCTGG 62.379 66.667 8.34 0.00 0.00 4.85
2590 2976 2.811317 GAACTCGTGAGGCCGCTG 60.811 66.667 8.34 0.00 0.00 5.18
2591 2977 4.070552 GGAACTCGTGAGGCCGCT 62.071 66.667 8.34 0.00 0.00 5.52
2592 2978 4.373116 TGGAACTCGTGAGGCCGC 62.373 66.667 0.00 0.00 32.01 6.53
2593 2979 2.125912 CTGGAACTCGTGAGGCCG 60.126 66.667 0.00 0.00 32.01 6.13
2594 2980 1.374758 CACTGGAACTCGTGAGGCC 60.375 63.158 0.00 0.00 33.04 5.19
2595 2981 2.029844 GCACTGGAACTCGTGAGGC 61.030 63.158 1.43 0.00 33.04 4.70
2596 2982 1.374758 GGCACTGGAACTCGTGAGG 60.375 63.158 1.43 0.00 33.04 3.86
2597 2983 0.034059 AAGGCACTGGAACTCGTGAG 59.966 55.000 0.00 0.00 40.86 3.51
2599 2985 0.249868 TCAAGGCACTGGAACTCGTG 60.250 55.000 0.00 0.00 34.02 4.35
2600 2986 0.468226 TTCAAGGCACTGGAACTCGT 59.532 50.000 0.00 0.00 44.63 4.18
2601 2987 1.151668 CTTCAAGGCACTGGAACTCG 58.848 55.000 0.00 0.00 44.63 4.18
2602 2988 0.877743 GCTTCAAGGCACTGGAACTC 59.122 55.000 0.00 0.00 44.63 3.01
2603 2989 0.886490 CGCTTCAAGGCACTGGAACT 60.886 55.000 0.00 0.00 44.63 3.01
2604 2990 1.166531 ACGCTTCAAGGCACTGGAAC 61.167 55.000 0.00 0.00 44.63 3.62
2606 2992 1.301716 GACGCTTCAAGGCACTGGA 60.302 57.895 0.00 0.00 40.86 3.86
2607 2993 2.671177 CGACGCTTCAAGGCACTGG 61.671 63.158 0.00 0.00 40.86 4.00
2608 2994 2.856032 CGACGCTTCAAGGCACTG 59.144 61.111 0.00 0.00 40.86 3.66
2610 2996 4.090057 GGCGACGCTTCAAGGCAC 62.090 66.667 20.77 0.00 0.00 5.01
2611 2997 4.314440 AGGCGACGCTTCAAGGCA 62.314 61.111 20.77 0.00 0.00 4.75
2612 2998 3.491652 GAGGCGACGCTTCAAGGC 61.492 66.667 25.04 4.50 34.72 4.35
2613 2999 3.181967 CGAGGCGACGCTTCAAGG 61.182 66.667 28.19 11.22 34.22 3.61
2614 3000 2.430921 ACGAGGCGACGCTTCAAG 60.431 61.111 28.19 16.91 34.22 3.02
2617 3003 3.909258 TTGGACGAGGCGACGCTTC 62.909 63.158 20.86 20.86 36.70 3.86
2622 3008 0.524862 TAAGACTTGGACGAGGCGAC 59.475 55.000 0.00 0.00 0.00 5.19
2647 3033 3.549221 GCAAACTGGTTCGGAATTTCGAA 60.549 43.478 17.61 17.61 45.34 3.71
2648 3034 2.031508 GCAAACTGGTTCGGAATTTCGA 60.032 45.455 4.25 4.25 37.38 3.71
2650 3036 3.643159 AGCAAACTGGTTCGGAATTTC 57.357 42.857 0.00 0.00 0.00 2.17
2652 3038 3.643159 GAAGCAAACTGGTTCGGAATT 57.357 42.857 3.11 0.00 43.62 2.17
2660 3046 0.538287 GAGCCTGGAAGCAAACTGGT 60.538 55.000 0.00 0.00 34.23 4.00
2661 3047 1.246737 GGAGCCTGGAAGCAAACTGG 61.247 60.000 0.00 0.00 34.23 4.00
2662 3048 0.538057 TGGAGCCTGGAAGCAAACTG 60.538 55.000 0.00 0.00 34.23 3.16
2663 3049 0.185901 TTGGAGCCTGGAAGCAAACT 59.814 50.000 0.00 0.00 34.23 2.66
2664 3050 0.600057 CTTGGAGCCTGGAAGCAAAC 59.400 55.000 0.00 0.00 34.23 2.93
2667 3240 0.324943 GTACTTGGAGCCTGGAAGCA 59.675 55.000 0.00 0.00 34.23 3.91
2669 3242 2.393271 CAGTACTTGGAGCCTGGAAG 57.607 55.000 0.00 0.00 0.00 3.46
2681 3254 6.775594 AAACTTTCTTCTTTGCCAGTACTT 57.224 33.333 0.00 0.00 0.00 2.24
2683 3256 6.436261 GGTAAACTTTCTTCTTTGCCAGTAC 58.564 40.000 0.00 0.00 33.59 2.73
2684 3257 5.237779 CGGTAAACTTTCTTCTTTGCCAGTA 59.762 40.000 0.00 0.00 33.11 2.74
2695 3268 6.266330 ACAGACTACTACCGGTAAACTTTCTT 59.734 38.462 16.65 3.25 0.00 2.52
2697 3270 6.018589 ACAGACTACTACCGGTAAACTTTC 57.981 41.667 16.65 8.55 0.00 2.62
2701 3274 3.437049 ACGACAGACTACTACCGGTAAAC 59.563 47.826 16.65 5.54 0.00 2.01
2702 3275 3.674997 ACGACAGACTACTACCGGTAAA 58.325 45.455 16.65 5.96 0.00 2.01
2706 3279 2.475187 CGAAACGACAGACTACTACCGG 60.475 54.545 0.00 0.00 0.00 5.28
2707 3280 2.413112 TCGAAACGACAGACTACTACCG 59.587 50.000 0.00 0.00 0.00 4.02
2708 3281 4.083590 ACTTCGAAACGACAGACTACTACC 60.084 45.833 0.00 0.00 34.89 3.18
2709 3282 5.028428 ACTTCGAAACGACAGACTACTAC 57.972 43.478 0.00 0.00 34.89 2.73
2710 3283 4.143242 CGACTTCGAAACGACAGACTACTA 60.143 45.833 15.97 0.00 43.02 1.82
2711 3284 3.363772 CGACTTCGAAACGACAGACTACT 60.364 47.826 15.97 0.00 43.02 2.57
2712 3285 2.901264 CGACTTCGAAACGACAGACTAC 59.099 50.000 15.97 0.00 43.02 2.73
2713 3286 2.663879 GCGACTTCGAAACGACAGACTA 60.664 50.000 22.35 0.00 43.02 2.59
2714 3287 1.925068 GCGACTTCGAAACGACAGACT 60.925 52.381 22.35 0.00 43.02 3.24
2715 3288 0.430110 GCGACTTCGAAACGACAGAC 59.570 55.000 22.35 6.10 43.02 3.51
2717 3290 1.122680 GAAGCGACTTCGAAACGACAG 59.877 52.381 22.35 3.59 43.02 3.51
2719 3292 0.433871 GGAAGCGACTTCGAAACGAC 59.566 55.000 22.35 15.18 40.99 4.34
2720 3293 1.000233 CGGAAGCGACTTCGAAACGA 61.000 55.000 22.35 0.00 40.99 3.85
2721 3294 1.273455 ACGGAAGCGACTTCGAAACG 61.273 55.000 16.46 16.46 40.99 3.60
2722 3295 0.433871 GACGGAAGCGACTTCGAAAC 59.566 55.000 2.02 0.00 40.99 2.78
2723 3296 1.000233 CGACGGAAGCGACTTCGAAA 61.000 55.000 2.02 0.00 40.99 3.46
2724 3297 1.441515 CGACGGAAGCGACTTCGAA 60.442 57.895 2.02 0.00 40.99 3.71
2725 3298 1.844771 TTCGACGGAAGCGACTTCGA 61.845 55.000 2.02 3.60 40.99 3.71
2726 3299 1.396543 CTTCGACGGAAGCGACTTCG 61.397 60.000 11.65 0.00 42.90 3.79
2727 3300 2.350833 CTTCGACGGAAGCGACTTC 58.649 57.895 10.08 10.08 42.90 3.01
2728 3301 4.554163 CTTCGACGGAAGCGACTT 57.446 55.556 0.00 0.00 42.90 3.01
2754 3327 4.036380 AGCTGAAACAAACGGGTAAAGAAG 59.964 41.667 0.00 0.00 0.00 2.85
2767 3340 0.383949 GACCGGCAAAGCTGAAACAA 59.616 50.000 0.00 0.00 37.02 2.83
2770 3343 0.816018 TTCGACCGGCAAAGCTGAAA 60.816 50.000 0.00 0.00 37.02 2.69
2831 3404 5.830000 AGTGAAGTCAAAGTTTTGTACCC 57.170 39.130 4.67 0.15 39.18 3.69
2931 3504 6.257586 AGTACTAGTTCATCCTTCCTCAAGT 58.742 40.000 0.00 0.00 0.00 3.16
2936 3509 6.041069 GCATGTAGTACTAGTTCATCCTTCCT 59.959 42.308 1.87 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.