Multiple sequence alignment - TraesCS7B01G058900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G058900 chr7B 100.000 5268 0 0 1 5268 61556591 61561858 0.000000e+00 9729.0
1 TraesCS7B01G058900 chr7B 100.000 3313 0 0 5574 8886 61562164 61565476 0.000000e+00 6119.0
2 TraesCS7B01G058900 chr7B 100.000 37 0 0 5863 5899 61562354 61562390 1.600000e-07 69.4
3 TraesCS7B01G058900 chr7B 100.000 37 0 0 5764 5800 61562453 61562489 1.600000e-07 69.4
4 TraesCS7B01G058900 chr7D 92.785 3465 160 39 812 4239 102968507 102971918 0.000000e+00 4931.0
5 TraesCS7B01G058900 chr7D 90.740 1825 95 23 7126 8886 102975052 102976866 0.000000e+00 2366.0
6 TraesCS7B01G058900 chr7D 93.284 1474 68 11 5574 7040 102973307 102974756 0.000000e+00 2145.0
7 TraesCS7B01G058900 chr7D 95.095 897 35 5 4268 5160 102971918 102972809 0.000000e+00 1404.0
8 TraesCS7B01G058900 chr7D 100.000 37 0 0 5863 5899 102973500 102973536 1.600000e-07 69.4
9 TraesCS7B01G058900 chr7A 92.483 2541 126 27 6390 8886 107850603 107853122 0.000000e+00 3574.0
10 TraesCS7B01G058900 chr7A 92.254 2285 98 34 812 3047 107847073 107849327 0.000000e+00 3166.0
11 TraesCS7B01G058900 chr7A 93.510 1094 48 11 3108 4199 107849534 107850606 0.000000e+00 1605.0
12 TraesCS7B01G058900 chr7A 91.297 563 41 4 140 702 35515134 35515688 0.000000e+00 761.0
13 TraesCS7B01G058900 chr7A 96.396 222 7 1 2940 3161 107849321 107849541 1.820000e-96 364.0
14 TraesCS7B01G058900 chr7A 91.667 60 5 0 8827 8886 107853128 107853187 5.720000e-12 84.2
15 TraesCS7B01G058900 chr4D 92.233 824 45 8 927 1744 490990892 490991702 0.000000e+00 1149.0
16 TraesCS7B01G058900 chr4D 93.262 653 36 3 53 702 499840916 499841563 0.000000e+00 955.0
17 TraesCS7B01G058900 chr5A 88.661 829 65 12 927 1744 160774663 160775473 0.000000e+00 983.0
18 TraesCS7B01G058900 chr3A 91.396 709 47 8 1 699 74240767 74240063 0.000000e+00 959.0
19 TraesCS7B01G058900 chr1A 90.701 699 58 2 3 701 255004884 255005575 0.000000e+00 924.0
20 TraesCS7B01G058900 chr1A 82.675 329 46 7 374 701 448905018 448905336 1.890000e-71 281.0
21 TraesCS7B01G058900 chr2A 90.171 702 46 7 3 699 11348484 11349167 0.000000e+00 893.0
22 TraesCS7B01G058900 chr6B 85.022 454 52 3 262 701 93645237 93644786 1.760000e-121 448.0
23 TraesCS7B01G058900 chr4A 84.146 328 40 5 374 701 39595285 39594970 3.120000e-79 307.0
24 TraesCS7B01G058900 chr3B 85.567 291 39 3 412 701 8873057 8873345 1.450000e-77 302.0
25 TraesCS7B01G058900 chr3B 79.769 173 29 6 3241 3410 749761806 749761975 4.360000e-23 121.0
26 TraesCS7B01G058900 chr3B 78.344 157 27 4 4 155 8872843 8872997 2.640000e-15 95.3
27 TraesCS7B01G058900 chr3D 83.086 337 49 6 362 697 552758841 552759170 5.210000e-77 300.0
28 TraesCS7B01G058900 chr1B 75.890 618 102 28 22 607 33847563 33846961 1.140000e-68 272.0
29 TraesCS7B01G058900 chr1B 92.553 94 6 1 603 696 33845210 33845118 5.600000e-27 134.0
30 TraesCS7B01G058900 chrUn 81.600 125 19 4 3241 3363 77492271 77492393 5.680000e-17 100.0
31 TraesCS7B01G058900 chr4B 90.909 55 5 0 3229 3283 347763388 347763442 3.440000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G058900 chr7B 61556591 61565476 8885 False 3996.70 9729 100.0000 1 8886 4 chr7B.!!$F1 8885
1 TraesCS7B01G058900 chr7D 102968507 102976866 8359 False 2183.08 4931 94.3808 812 8886 5 chr7D.!!$F1 8074
2 TraesCS7B01G058900 chr7A 107847073 107853187 6114 False 1758.64 3574 93.2620 812 8886 5 chr7A.!!$F2 8074
3 TraesCS7B01G058900 chr7A 35515134 35515688 554 False 761.00 761 91.2970 140 702 1 chr7A.!!$F1 562
4 TraesCS7B01G058900 chr4D 490990892 490991702 810 False 1149.00 1149 92.2330 927 1744 1 chr4D.!!$F1 817
5 TraesCS7B01G058900 chr4D 499840916 499841563 647 False 955.00 955 93.2620 53 702 1 chr4D.!!$F2 649
6 TraesCS7B01G058900 chr5A 160774663 160775473 810 False 983.00 983 88.6610 927 1744 1 chr5A.!!$F1 817
7 TraesCS7B01G058900 chr3A 74240063 74240767 704 True 959.00 959 91.3960 1 699 1 chr3A.!!$R1 698
8 TraesCS7B01G058900 chr1A 255004884 255005575 691 False 924.00 924 90.7010 3 701 1 chr1A.!!$F1 698
9 TraesCS7B01G058900 chr2A 11348484 11349167 683 False 893.00 893 90.1710 3 699 1 chr2A.!!$F1 696
10 TraesCS7B01G058900 chr1B 33845118 33847563 2445 True 203.00 272 84.2215 22 696 2 chr1B.!!$R1 674

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
769 2627 0.030101 CTCCGGCGCAAAGTTTCAAA 59.970 50.0 10.83 0.0 0.00 2.69 F
772 2630 0.030101 CGGCGCAAAGTTTCAAAGGA 59.970 50.0 10.83 0.0 0.00 3.36 F
2262 4179 0.324614 ATGACTTGTGGTGCGGATCA 59.675 50.0 0.00 0.0 0.00 2.92 F
3374 5448 0.108804 CCGATCAGTTGTACCGCAGT 60.109 55.0 0.00 0.0 0.00 4.40 F
4259 6336 0.114954 TGAATTTCAAGCCCCAGCCT 59.885 50.0 0.00 0.0 41.25 4.58 F
4262 6339 0.114954 ATTTCAAGCCCCAGCCTTCA 59.885 50.0 0.00 0.0 41.25 3.02 F
5168 7249 0.168128 CCCTGAATTCACGTTTCGGC 59.832 55.0 3.38 0.0 0.00 5.54 F
5197 7278 0.037326 CCATGTATACGAGGCGGCAT 60.037 55.0 13.08 0.0 0.00 4.40 F
5202 7283 0.105964 TATACGAGGCGGCATTTGCT 59.894 50.0 13.08 0.0 41.70 3.91 F
6735 8907 0.240945 CCAACCGGCATCAACACTTC 59.759 55.0 0.00 0.0 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2661 4578 0.543749 ATCCAGCTAGAACCAGCACC 59.456 55.000 0.00 0.00 44.35 5.01 R
2721 4638 6.053005 CCATTTACATACCCACTACGTTCAT 58.947 40.000 0.00 0.00 0.00 2.57 R
4181 6258 0.106719 ACTTGTGGTTGACTGGGGTG 60.107 55.000 0.00 0.00 0.00 4.61 R
5178 7259 0.037326 ATGCCGCCTCGTATACATGG 60.037 55.000 3.32 5.31 0.00 3.66 R
5183 7264 0.105964 AGCAAATGCCGCCTCGTATA 59.894 50.000 0.94 0.00 43.38 1.47 R
5193 7274 0.319405 AAAGGTGCAGAGCAAATGCC 59.681 50.000 0.94 0.00 41.47 4.40 R
7106 9279 0.394565 AGAGGTGCGTCTTTGAAGCT 59.605 50.000 6.98 0.00 37.87 3.74 R
7294 9679 1.583495 CCTGTACTCTGGACGCGTGA 61.583 60.000 20.70 7.11 35.11 4.35 R
7299 9684 1.154016 CGCACCTGTACTCTGGACG 60.154 63.158 7.04 6.55 36.65 4.79 R
7925 10317 0.036952 ACATGGCTTGGTCAGACGAG 60.037 55.000 5.31 0.00 29.50 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 108 5.183969 GCCGGATTTTTACTTCTCTAACCT 58.816 41.667 5.05 0.00 0.00 3.50
237 261 7.882271 ACTTGCATATCCATCTTCTAAGAATCC 59.118 37.037 0.00 0.00 38.77 3.01
264 345 0.036164 TCATTACCAGTGCACCGCTT 59.964 50.000 14.63 0.00 0.00 4.68
309 390 0.746204 TGCACGTTCTTTGTCAGCCA 60.746 50.000 0.00 0.00 0.00 4.75
332 413 2.987282 TTCTTGCGCTGCTCGTTCCA 62.987 55.000 9.73 0.00 41.07 3.53
432 527 0.038526 GACATTGTCTCACCGACCGT 60.039 55.000 9.59 0.00 42.13 4.83
485 580 0.301987 GAACGAGCAAGCCGATTAGC 59.698 55.000 9.31 0.00 0.00 3.09
504 599 0.107017 CTTGGGGACAGCCGATTCAT 60.107 55.000 0.00 0.00 44.54 2.57
510 605 2.224523 GGGACAGCCGATTCATGGATTA 60.225 50.000 0.00 0.00 33.83 1.75
518 613 4.262463 GCCGATTCATGGATTACTGGTCTA 60.262 45.833 0.00 0.00 0.00 2.59
527 625 4.600111 TGGATTACTGGTCTAGGTTGGTTT 59.400 41.667 0.00 0.00 0.00 3.27
551 649 1.439353 ATGCATTGGACGCGGCTAAG 61.439 55.000 17.98 9.85 0.00 2.18
580 678 2.315176 CCAAACCTGGACATGGTTCAA 58.685 47.619 0.00 0.00 46.92 2.69
586 684 4.998051 ACCTGGACATGGTTCAAAATAGT 58.002 39.130 0.00 0.00 33.34 2.12
596 699 3.352648 GTTCAAAATAGTGGCCAGCCTA 58.647 45.455 5.11 5.42 36.94 3.93
625 2483 1.794714 ACTCATAGCGTCCTTCCCAT 58.205 50.000 0.00 0.00 0.00 4.00
661 2519 7.706100 TTCAAGTTACCTTTACCAGTTTTGT 57.294 32.000 0.00 0.00 0.00 2.83
714 2572 5.684550 AAAAATCGGGTTGTGAACTAGTC 57.315 39.130 0.00 0.00 0.00 2.59
715 2573 3.329929 AATCGGGTTGTGAACTAGTCC 57.670 47.619 0.00 0.00 0.00 3.85
716 2574 0.971386 TCGGGTTGTGAACTAGTCCC 59.029 55.000 0.00 0.00 0.00 4.46
717 2575 0.974383 CGGGTTGTGAACTAGTCCCT 59.026 55.000 12.04 0.00 33.41 4.20
718 2576 1.346722 CGGGTTGTGAACTAGTCCCTT 59.653 52.381 12.04 0.00 33.41 3.95
719 2577 2.779506 GGGTTGTGAACTAGTCCCTTG 58.220 52.381 7.65 0.00 32.89 3.61
720 2578 2.152016 GGTTGTGAACTAGTCCCTTGC 58.848 52.381 0.00 0.00 0.00 4.01
721 2579 2.224548 GGTTGTGAACTAGTCCCTTGCT 60.225 50.000 0.00 0.00 0.00 3.91
722 2580 3.477530 GTTGTGAACTAGTCCCTTGCTT 58.522 45.455 0.00 0.00 0.00 3.91
723 2581 3.857157 TGTGAACTAGTCCCTTGCTTT 57.143 42.857 0.00 0.00 0.00 3.51
724 2582 4.164843 TGTGAACTAGTCCCTTGCTTTT 57.835 40.909 0.00 0.00 0.00 2.27
725 2583 4.532834 TGTGAACTAGTCCCTTGCTTTTT 58.467 39.130 0.00 0.00 0.00 1.94
744 2602 5.437289 TTTTTGTGAACTAGTCATGCCAG 57.563 39.130 0.00 0.00 38.90 4.85
745 2603 3.769739 TTGTGAACTAGTCATGCCAGT 57.230 42.857 0.00 0.00 38.90 4.00
746 2604 3.769739 TGTGAACTAGTCATGCCAGTT 57.230 42.857 0.00 6.23 38.90 3.16
747 2605 3.402110 TGTGAACTAGTCATGCCAGTTG 58.598 45.455 10.07 0.00 38.90 3.16
748 2606 3.070878 TGTGAACTAGTCATGCCAGTTGA 59.929 43.478 10.07 1.41 38.90 3.18
749 2607 4.065088 GTGAACTAGTCATGCCAGTTGAA 58.935 43.478 10.07 0.00 38.90 2.69
750 2608 4.065088 TGAACTAGTCATGCCAGTTGAAC 58.935 43.478 10.07 0.00 32.79 3.18
751 2609 4.202357 TGAACTAGTCATGCCAGTTGAACT 60.202 41.667 10.07 0.00 32.79 3.01
752 2610 3.931578 ACTAGTCATGCCAGTTGAACTC 58.068 45.455 0.00 0.00 0.00 3.01
753 2611 2.191128 AGTCATGCCAGTTGAACTCC 57.809 50.000 0.00 0.00 0.00 3.85
754 2612 0.798776 GTCATGCCAGTTGAACTCCG 59.201 55.000 0.00 0.00 0.00 4.63
755 2613 0.321564 TCATGCCAGTTGAACTCCGG 60.322 55.000 0.00 0.00 0.00 5.14
756 2614 1.675641 ATGCCAGTTGAACTCCGGC 60.676 57.895 17.09 17.09 37.68 6.13
757 2615 3.423154 GCCAGTTGAACTCCGGCG 61.423 66.667 10.42 0.00 29.33 6.46
758 2616 3.423154 CCAGTTGAACTCCGGCGC 61.423 66.667 0.00 0.00 0.00 6.53
759 2617 2.664851 CAGTTGAACTCCGGCGCA 60.665 61.111 10.83 0.00 0.00 6.09
760 2618 2.110213 AGTTGAACTCCGGCGCAA 59.890 55.556 10.83 0.00 0.00 4.85
761 2619 1.525077 AGTTGAACTCCGGCGCAAA 60.525 52.632 10.83 0.00 0.00 3.68
762 2620 1.082104 GTTGAACTCCGGCGCAAAG 60.082 57.895 10.83 5.46 0.00 2.77
763 2621 1.525077 TTGAACTCCGGCGCAAAGT 60.525 52.632 10.83 6.20 0.00 2.66
764 2622 1.098712 TTGAACTCCGGCGCAAAGTT 61.099 50.000 17.69 17.69 36.00 2.66
765 2623 1.098712 TGAACTCCGGCGCAAAGTTT 61.099 50.000 18.40 3.09 33.54 2.66
766 2624 0.385598 GAACTCCGGCGCAAAGTTTC 60.386 55.000 18.40 8.24 33.54 2.78
767 2625 1.098712 AACTCCGGCGCAAAGTTTCA 61.099 50.000 10.83 0.00 29.09 2.69
768 2626 1.098712 ACTCCGGCGCAAAGTTTCAA 61.099 50.000 10.83 0.00 0.00 2.69
769 2627 0.030101 CTCCGGCGCAAAGTTTCAAA 59.970 50.000 10.83 0.00 0.00 2.69
770 2628 0.030101 TCCGGCGCAAAGTTTCAAAG 59.970 50.000 10.83 0.00 0.00 2.77
771 2629 0.939106 CCGGCGCAAAGTTTCAAAGG 60.939 55.000 10.83 0.00 0.00 3.11
772 2630 0.030101 CGGCGCAAAGTTTCAAAGGA 59.970 50.000 10.83 0.00 0.00 3.36
773 2631 1.335872 CGGCGCAAAGTTTCAAAGGAT 60.336 47.619 10.83 0.00 0.00 3.24
774 2632 2.754472 GGCGCAAAGTTTCAAAGGATT 58.246 42.857 10.83 0.00 0.00 3.01
775 2633 2.731451 GGCGCAAAGTTTCAAAGGATTC 59.269 45.455 10.83 0.00 0.00 2.52
776 2634 2.405025 GCGCAAAGTTTCAAAGGATTCG 59.595 45.455 0.30 0.00 0.00 3.34
777 2635 3.851838 GCGCAAAGTTTCAAAGGATTCGA 60.852 43.478 0.30 0.00 0.00 3.71
778 2636 3.908382 CGCAAAGTTTCAAAGGATTCGAG 59.092 43.478 0.00 0.00 0.00 4.04
779 2637 3.670523 GCAAAGTTTCAAAGGATTCGAGC 59.329 43.478 0.00 0.00 0.00 5.03
780 2638 4.229876 CAAAGTTTCAAAGGATTCGAGCC 58.770 43.478 0.00 0.00 0.00 4.70
781 2639 2.076863 AGTTTCAAAGGATTCGAGCCG 58.923 47.619 1.31 0.00 0.00 5.52
782 2640 1.804748 GTTTCAAAGGATTCGAGCCGT 59.195 47.619 1.31 0.00 0.00 5.68
783 2641 2.178912 TTCAAAGGATTCGAGCCGTT 57.821 45.000 2.58 2.58 0.00 4.44
784 2642 1.722011 TCAAAGGATTCGAGCCGTTC 58.278 50.000 4.96 0.00 0.00 3.95
785 2643 1.001520 TCAAAGGATTCGAGCCGTTCA 59.998 47.619 4.96 0.00 0.00 3.18
786 2644 1.804151 CAAAGGATTCGAGCCGTTCAA 59.196 47.619 4.96 0.00 0.00 2.69
787 2645 2.178912 AAGGATTCGAGCCGTTCAAA 57.821 45.000 1.31 0.00 0.00 2.69
788 2646 2.178912 AGGATTCGAGCCGTTCAAAA 57.821 45.000 1.31 0.00 0.00 2.44
789 2647 1.804748 AGGATTCGAGCCGTTCAAAAC 59.195 47.619 1.31 0.00 0.00 2.43
1048 2926 2.759973 AGATCCGGGCGCTCAAGA 60.760 61.111 8.62 3.13 0.00 3.02
1059 2937 1.524482 GCTCAAGAGGAAGCCCGAT 59.476 57.895 0.00 0.00 37.58 4.18
1160 3038 0.448593 GTCCTCTCCGAGTTCTCGTG 59.551 60.000 18.59 12.01 0.00 4.35
1182 3063 1.005569 GCAAACCCTAACCCTAGCCTT 59.994 52.381 0.00 0.00 0.00 4.35
1190 3072 2.889522 AACCCTAGCCTTATCCCTCA 57.110 50.000 0.00 0.00 0.00 3.86
1191 3073 3.368921 AACCCTAGCCTTATCCCTCAT 57.631 47.619 0.00 0.00 0.00 2.90
1195 3080 3.525862 CCTAGCCTTATCCCTCATTCCT 58.474 50.000 0.00 0.00 0.00 3.36
1208 3093 2.630098 CTCATTCCTCCATCGGCTTCTA 59.370 50.000 0.00 0.00 0.00 2.10
1528 3430 1.472728 CCACCTGTATAGCGGTTCACC 60.473 57.143 0.00 0.00 0.00 4.02
1543 3445 2.455674 TCACCAGTGTCAGTGTATGC 57.544 50.000 6.91 0.00 35.45 3.14
1547 3449 3.618594 CACCAGTGTCAGTGTATGCATAC 59.381 47.826 26.72 26.72 0.00 2.39
1589 3498 1.278985 TGCTTGTGTGCACTAGGCTAT 59.721 47.619 19.41 0.00 45.15 2.97
1590 3499 2.499693 TGCTTGTGTGCACTAGGCTATA 59.500 45.455 19.41 1.28 45.15 1.31
1591 3500 3.055458 TGCTTGTGTGCACTAGGCTATAA 60.055 43.478 19.41 0.00 45.15 0.98
1592 3501 3.557595 GCTTGTGTGCACTAGGCTATAAG 59.442 47.826 19.41 11.06 45.15 1.73
1634 3543 2.907458 ATTCCCTTGCAACCTAGCTT 57.093 45.000 0.00 0.00 34.99 3.74
1724 3633 6.228616 TGGATCCTGTCGTCATTAACAATA 57.771 37.500 14.23 0.00 0.00 1.90
1731 3640 6.203530 CCTGTCGTCATTAACAATATGCAGAT 59.796 38.462 0.00 0.00 0.00 2.90
1749 3658 5.645067 TGCAGATGGAACTGATCTTGTTTAG 59.355 40.000 0.00 0.00 39.94 1.85
1750 3659 5.448360 GCAGATGGAACTGATCTTGTTTAGC 60.448 44.000 0.00 3.30 39.94 3.09
1753 3662 6.716628 AGATGGAACTGATCTTGTTTAGCAAA 59.283 34.615 6.22 0.00 36.53 3.68
1754 3663 6.072112 TGGAACTGATCTTGTTTAGCAAAC 57.928 37.500 6.22 5.22 41.73 2.93
1761 3670 4.053469 TCTTGTTTAGCAAACTTTGGCC 57.947 40.909 0.00 0.00 41.90 5.36
1766 3675 4.219725 TGTTTAGCAAACTTTGGCCTATCC 59.780 41.667 3.32 0.00 41.90 2.59
1768 3677 2.728007 AGCAAACTTTGGCCTATCCTC 58.272 47.619 3.32 0.00 35.26 3.71
1771 3680 3.448660 GCAAACTTTGGCCTATCCTCATT 59.551 43.478 3.32 0.00 35.26 2.57
1773 3682 5.654497 CAAACTTTGGCCTATCCTCATTTC 58.346 41.667 3.32 0.00 35.26 2.17
1775 3684 4.530875 ACTTTGGCCTATCCTCATTTCAG 58.469 43.478 3.32 0.00 35.26 3.02
1776 3685 4.018050 ACTTTGGCCTATCCTCATTTCAGT 60.018 41.667 3.32 0.00 35.26 3.41
1782 3691 4.615949 CCTATCCTCATTTCAGTGAGTCG 58.384 47.826 0.00 0.00 43.22 4.18
1806 3715 7.977293 TCGTAGCAGAAGCATGTAATTTAGTAA 59.023 33.333 0.00 0.00 45.49 2.24
1816 3725 9.388672 AGCATGTAATTTAGTAACCCCTCTATA 57.611 33.333 0.00 0.00 0.00 1.31
1875 3789 6.462500 TGACCATAACAATTGTTCAAATGGG 58.538 36.000 34.18 25.16 42.07 4.00
1936 3853 4.202050 GCTTGTACATAGGATTTTGCCCAG 60.202 45.833 0.00 0.00 0.00 4.45
1955 3872 3.307242 CCAGTCAAACGCTAGATGCTTAC 59.693 47.826 0.00 0.00 40.11 2.34
1969 3886 3.403613 TGCTTACATGTTGCTTATGCG 57.596 42.857 19.47 0.00 43.34 4.73
1979 3896 5.155509 TGTTGCTTATGCGTAATGATGAC 57.844 39.130 0.00 0.00 43.34 3.06
2101 4018 0.534412 ACCATCTCTCCGACAAGCTG 59.466 55.000 0.00 0.00 0.00 4.24
2181 4098 2.086610 AGTTGGGTGGAAACAATGCT 57.913 45.000 0.00 0.00 46.06 3.79
2262 4179 0.324614 ATGACTTGTGGTGCGGATCA 59.675 50.000 0.00 0.00 0.00 2.92
2322 4239 5.705441 TGTTATTCTTGAGCAACCACCTAAG 59.295 40.000 0.00 0.00 0.00 2.18
2545 4462 6.148948 TGATCAGCCACTTTATTTTTCAACG 58.851 36.000 0.00 0.00 0.00 4.10
2661 4578 7.308782 AGGCACAAATTCTCTTTTATACTCG 57.691 36.000 0.00 0.00 0.00 4.18
2721 4638 8.040727 TCTATTAGCATAGTCTTTGAAGTGCAA 58.959 33.333 0.00 0.00 34.85 4.08
2748 4665 5.807909 ACGTAGTGGGTATGTAAATGGTTT 58.192 37.500 0.00 0.00 42.51 3.27
2915 4840 2.292292 GACGTACATTTGTTTGCCCACT 59.708 45.455 0.00 0.00 0.00 4.00
3006 5032 9.288576 CCTTATGATATTCTGAAGCCACATTTA 57.711 33.333 0.00 0.00 0.00 1.40
3174 5248 6.246420 AGTGATATGACTTTGTTTGTCTGC 57.754 37.500 0.00 0.00 35.63 4.26
3265 5339 1.692042 CCTGGGTCCAGATGCTCCT 60.692 63.158 17.91 0.00 46.30 3.69
3288 5362 0.401356 ATCTGGACCACACATGTGCA 59.599 50.000 25.68 13.61 44.34 4.57
3369 5443 0.743345 GCCCACCGATCAGTTGTACC 60.743 60.000 0.00 0.00 0.00 3.34
3374 5448 0.108804 CCGATCAGTTGTACCGCAGT 60.109 55.000 0.00 0.00 0.00 4.40
3383 5457 1.262417 TGTACCGCAGTGAATCTCCA 58.738 50.000 0.00 0.00 0.00 3.86
3436 5510 1.064906 ACGGATCTGTCCTAACGGAGA 60.065 52.381 0.00 0.00 43.92 3.71
3442 5516 1.139095 GTCCTAACGGAGAGCCACG 59.861 63.158 0.00 0.00 40.84 4.94
3449 5523 2.636412 CGGAGAGCCACGACTGGAA 61.636 63.158 0.00 0.00 40.55 3.53
3466 5540 2.145536 GGAACACCGGATTGTAAACGT 58.854 47.619 9.46 0.00 0.00 3.99
3467 5541 2.549329 GGAACACCGGATTGTAAACGTT 59.451 45.455 9.46 0.00 0.00 3.99
3520 5594 2.272146 CCACCACCATCCCCTTCG 59.728 66.667 0.00 0.00 0.00 3.79
3572 5648 1.690219 CCATTCCTCCTCCCTCCACG 61.690 65.000 0.00 0.00 0.00 4.94
3728 5804 6.270064 ACTTTAATGGGAAACAAAACACTCG 58.730 36.000 0.00 0.00 0.00 4.18
3760 5836 3.393687 TCCCCTGTAGTGGAAGCATTAT 58.606 45.455 0.00 0.00 0.00 1.28
3827 5903 5.630121 TGATACACTTCAACATCAACCCTT 58.370 37.500 0.00 0.00 0.00 3.95
3828 5904 6.068010 TGATACACTTCAACATCAACCCTTT 58.932 36.000 0.00 0.00 0.00 3.11
3829 5905 6.549364 TGATACACTTCAACATCAACCCTTTT 59.451 34.615 0.00 0.00 0.00 2.27
3874 5950 5.415221 GTCTTCTTCTTCGTCCTTCATGAT 58.585 41.667 0.00 0.00 0.00 2.45
3934 6010 1.872237 GCTGGTACACAAGCGACTTCA 60.872 52.381 0.00 0.00 0.00 3.02
3964 6040 3.261643 TGTAATCTGGCTCTGTCACACAT 59.738 43.478 0.00 0.00 0.00 3.21
4064 6140 4.556233 TGAAACTTACATCCGACAGACTG 58.444 43.478 0.00 0.00 0.00 3.51
4199 6276 0.182537 TCACCCCAGTCAACCACAAG 59.817 55.000 0.00 0.00 0.00 3.16
4207 6284 2.097466 CAGTCAACCACAAGTCCACAAC 59.903 50.000 0.00 0.00 0.00 3.32
4244 6321 6.829229 CATGTATGCATCCCAGTATTGAAT 57.171 37.500 0.19 0.00 31.99 2.57
4245 6322 7.223260 CATGTATGCATCCCAGTATTGAATT 57.777 36.000 0.19 0.00 31.99 2.17
4246 6323 7.663827 CATGTATGCATCCCAGTATTGAATTT 58.336 34.615 0.19 0.00 31.99 1.82
4247 6324 7.275888 TGTATGCATCCCAGTATTGAATTTC 57.724 36.000 0.19 0.00 0.00 2.17
4248 6325 6.832900 TGTATGCATCCCAGTATTGAATTTCA 59.167 34.615 0.19 0.00 0.00 2.69
4249 6326 6.795144 ATGCATCCCAGTATTGAATTTCAA 57.205 33.333 13.88 13.88 41.09 2.69
4250 6327 6.211587 TGCATCCCAGTATTGAATTTCAAG 57.788 37.500 16.34 4.02 40.05 3.02
4251 6328 5.045872 GCATCCCAGTATTGAATTTCAAGC 58.954 41.667 16.34 11.68 40.05 4.01
4252 6329 5.594926 CATCCCAGTATTGAATTTCAAGCC 58.405 41.667 16.34 9.57 40.05 4.35
4253 6330 4.023291 TCCCAGTATTGAATTTCAAGCCC 58.977 43.478 16.34 7.45 40.05 5.19
4254 6331 3.132824 CCCAGTATTGAATTTCAAGCCCC 59.867 47.826 16.34 5.35 40.05 5.80
4255 6332 3.768757 CCAGTATTGAATTTCAAGCCCCA 59.231 43.478 16.34 0.00 40.05 4.96
4256 6333 4.142093 CCAGTATTGAATTTCAAGCCCCAG 60.142 45.833 16.34 5.41 40.05 4.45
4257 6334 3.448660 AGTATTGAATTTCAAGCCCCAGC 59.551 43.478 16.34 3.23 40.05 4.85
4258 6335 0.975887 TTGAATTTCAAGCCCCAGCC 59.024 50.000 7.74 0.00 41.25 4.85
4259 6336 0.114954 TGAATTTCAAGCCCCAGCCT 59.885 50.000 0.00 0.00 41.25 4.58
4260 6337 1.269958 GAATTTCAAGCCCCAGCCTT 58.730 50.000 0.00 0.00 41.25 4.35
4261 6338 1.205655 GAATTTCAAGCCCCAGCCTTC 59.794 52.381 0.00 0.00 41.25 3.46
4262 6339 0.114954 ATTTCAAGCCCCAGCCTTCA 59.885 50.000 0.00 0.00 41.25 3.02
4263 6340 0.540365 TTTCAAGCCCCAGCCTTCAG 60.540 55.000 0.00 0.00 41.25 3.02
4264 6341 1.426251 TTCAAGCCCCAGCCTTCAGA 61.426 55.000 0.00 0.00 41.25 3.27
4265 6342 1.210204 TCAAGCCCCAGCCTTCAGAT 61.210 55.000 0.00 0.00 41.25 2.90
4266 6343 1.035932 CAAGCCCCAGCCTTCAGATG 61.036 60.000 0.00 0.00 41.25 2.90
4267 6344 1.210204 AAGCCCCAGCCTTCAGATGA 61.210 55.000 0.00 0.00 41.25 2.92
4317 6394 6.613271 ATGTATACATCTCCTCAGGTTTGAGT 59.387 38.462 12.75 0.00 39.79 3.41
4328 6405 4.318332 TCAGGTTTGAGTGCACTCTTATG 58.682 43.478 38.81 29.01 43.25 1.90
4370 6447 1.812922 CATCTCGTGCTGTGGCTCC 60.813 63.158 0.00 0.00 39.59 4.70
4373 6450 3.655810 CTCGTGCTGTGGCTCCTCC 62.656 68.421 0.00 0.00 39.59 4.30
4476 6553 1.270274 GCAACATGATCTGCAACACCA 59.730 47.619 0.00 0.00 38.48 4.17
4509 6586 3.009723 CCGCATCAAGATACAACAACCT 58.990 45.455 0.00 0.00 0.00 3.50
4522 6599 2.461897 ACAACCTAACGCAACAAACG 57.538 45.000 0.00 0.00 0.00 3.60
4540 6617 5.407387 ACAAACGCACTAAAATGTATCGAGT 59.593 36.000 0.00 0.00 0.00 4.18
4590 6667 3.327757 TCAATCCTAACTCCAGTGTGCTT 59.672 43.478 0.00 0.00 0.00 3.91
4591 6668 3.618690 ATCCTAACTCCAGTGTGCTTC 57.381 47.619 0.00 0.00 0.00 3.86
4613 6690 5.005094 TCTCTGTGATCATTGTTGCAATGA 58.995 37.500 21.78 21.78 40.50 2.57
4614 6691 5.650703 TCTCTGTGATCATTGTTGCAATGAT 59.349 36.000 27.29 27.29 46.67 2.45
4629 6706 4.142622 TGCAATGATGTCGAAATCAAGGTC 60.143 41.667 21.80 11.69 39.90 3.85
4637 6714 3.548268 GTCGAAATCAAGGTCTGACGATC 59.452 47.826 1.07 0.00 36.69 3.69
4662 6739 3.846588 TCTGCCTCCATTAGTTCTTCCTT 59.153 43.478 0.00 0.00 0.00 3.36
4681 6758 9.807921 TCTTCCTTCAAATACAGTATTTTTCCT 57.192 29.630 14.86 0.00 36.29 3.36
4682 6759 9.846248 CTTCCTTCAAATACAGTATTTTTCCTG 57.154 33.333 14.86 5.84 36.29 3.86
4730 6808 2.223479 GCAACCACGAAATGACAACACT 60.223 45.455 0.00 0.00 0.00 3.55
4731 6809 3.617669 CAACCACGAAATGACAACACTC 58.382 45.455 0.00 0.00 0.00 3.51
4732 6810 2.912771 ACCACGAAATGACAACACTCA 58.087 42.857 0.00 0.00 0.00 3.41
4733 6811 2.872245 ACCACGAAATGACAACACTCAG 59.128 45.455 0.00 0.00 0.00 3.35
4734 6812 2.349817 CCACGAAATGACAACACTCAGC 60.350 50.000 0.00 0.00 0.00 4.26
4735 6813 2.545526 CACGAAATGACAACACTCAGCT 59.454 45.455 0.00 0.00 0.00 4.24
4737 6815 2.802247 CGAAATGACAACACTCAGCTGA 59.198 45.455 17.19 17.19 0.00 4.26
4738 6816 3.248363 CGAAATGACAACACTCAGCTGAA 59.752 43.478 18.85 0.00 0.00 3.02
4840 6921 2.032528 CTTCCTCACCAAGCGCCA 59.967 61.111 2.29 0.00 0.00 5.69
4861 6942 5.877012 GCCACATCGATACCATTTGATCTAT 59.123 40.000 0.00 0.00 0.00 1.98
4867 6948 8.465201 CATCGATACCATTTGATCTATCTCTGA 58.535 37.037 0.00 0.00 0.00 3.27
4915 6996 2.593468 ATCATCGCCCCCGTCAGTTG 62.593 60.000 0.00 0.00 35.54 3.16
4923 7004 1.507141 CCCCGTCAGTTGAACTGTGC 61.507 60.000 23.17 16.21 46.03 4.57
4944 7025 3.144506 CATGGATGAGTATGGCAGAACC 58.855 50.000 0.00 0.00 39.84 3.62
5141 7222 0.978146 GCAGTCCTAGCTTCCCAGGA 60.978 60.000 0.00 0.00 38.66 3.86
5161 7242 4.372656 GGATACTTCTCCCTGAATTCACG 58.627 47.826 3.38 0.30 33.71 4.35
5162 7243 4.141914 GGATACTTCTCCCTGAATTCACGT 60.142 45.833 3.38 0.00 33.71 4.49
5163 7244 3.771577 ACTTCTCCCTGAATTCACGTT 57.228 42.857 3.38 0.00 33.71 3.99
5164 7245 4.086706 ACTTCTCCCTGAATTCACGTTT 57.913 40.909 3.38 0.00 33.71 3.60
5165 7246 4.065789 ACTTCTCCCTGAATTCACGTTTC 58.934 43.478 3.38 0.00 33.71 2.78
5166 7247 2.683968 TCTCCCTGAATTCACGTTTCG 58.316 47.619 3.38 0.00 0.00 3.46
5167 7248 1.732259 CTCCCTGAATTCACGTTTCGG 59.268 52.381 3.38 3.06 0.00 4.30
5168 7249 0.168128 CCCTGAATTCACGTTTCGGC 59.832 55.000 3.38 0.00 0.00 5.54
5169 7250 0.168128 CCTGAATTCACGTTTCGGCC 59.832 55.000 3.38 0.00 0.00 6.13
5170 7251 1.156736 CTGAATTCACGTTTCGGCCT 58.843 50.000 3.38 0.00 0.00 5.19
5171 7252 1.128692 CTGAATTCACGTTTCGGCCTC 59.871 52.381 3.38 0.00 0.00 4.70
5172 7253 1.153353 GAATTCACGTTTCGGCCTCA 58.847 50.000 0.00 0.00 0.00 3.86
5173 7254 0.872388 AATTCACGTTTCGGCCTCAC 59.128 50.000 0.00 0.00 0.00 3.51
5174 7255 0.953960 ATTCACGTTTCGGCCTCACC 60.954 55.000 0.00 0.00 0.00 4.02
5175 7256 2.280524 CACGTTTCGGCCTCACCA 60.281 61.111 0.00 0.00 39.03 4.17
5176 7257 2.030562 ACGTTTCGGCCTCACCAG 59.969 61.111 0.00 0.00 39.03 4.00
5177 7258 2.342279 CGTTTCGGCCTCACCAGA 59.658 61.111 0.00 0.00 39.03 3.86
5178 7259 2.027625 CGTTTCGGCCTCACCAGAC 61.028 63.158 0.00 0.00 39.03 3.51
5179 7260 1.671379 GTTTCGGCCTCACCAGACC 60.671 63.158 0.00 0.00 39.03 3.85
5180 7261 2.144078 TTTCGGCCTCACCAGACCA 61.144 57.895 0.00 0.00 39.03 4.02
5181 7262 1.488705 TTTCGGCCTCACCAGACCAT 61.489 55.000 0.00 0.00 39.03 3.55
5182 7263 2.124983 CGGCCTCACCAGACCATG 60.125 66.667 0.00 0.00 39.03 3.66
5183 7264 2.959484 CGGCCTCACCAGACCATGT 61.959 63.158 0.00 0.00 39.03 3.21
5184 7265 1.613317 CGGCCTCACCAGACCATGTA 61.613 60.000 0.00 0.00 39.03 2.29
5185 7266 0.839946 GGCCTCACCAGACCATGTAT 59.160 55.000 0.00 0.00 38.86 2.29
5186 7267 2.047061 GGCCTCACCAGACCATGTATA 58.953 52.381 0.00 0.00 38.86 1.47
5187 7268 2.224305 GGCCTCACCAGACCATGTATAC 60.224 54.545 0.00 0.00 38.86 1.47
5188 7269 2.545952 GCCTCACCAGACCATGTATACG 60.546 54.545 0.00 0.00 0.00 3.06
5189 7270 2.956333 CCTCACCAGACCATGTATACGA 59.044 50.000 0.00 0.00 0.00 3.43
5190 7271 3.004839 CCTCACCAGACCATGTATACGAG 59.995 52.174 0.00 0.00 0.00 4.18
5191 7272 2.956333 TCACCAGACCATGTATACGAGG 59.044 50.000 10.85 10.85 0.00 4.63
5192 7273 1.687123 ACCAGACCATGTATACGAGGC 59.313 52.381 12.02 6.55 0.00 4.70
5193 7274 1.335964 CCAGACCATGTATACGAGGCG 60.336 57.143 12.02 0.00 0.00 5.52
5194 7275 0.959553 AGACCATGTATACGAGGCGG 59.040 55.000 12.02 4.36 0.00 6.13
5195 7276 0.666577 GACCATGTATACGAGGCGGC 60.667 60.000 0.00 0.00 0.00 6.53
5196 7277 1.365999 CCATGTATACGAGGCGGCA 59.634 57.895 13.08 0.00 0.00 5.69
5197 7278 0.037326 CCATGTATACGAGGCGGCAT 60.037 55.000 13.08 0.00 0.00 4.40
5198 7279 1.608025 CCATGTATACGAGGCGGCATT 60.608 52.381 13.08 0.00 0.00 3.56
5199 7280 2.143122 CATGTATACGAGGCGGCATTT 58.857 47.619 13.08 0.00 0.00 2.32
5200 7281 1.577468 TGTATACGAGGCGGCATTTG 58.423 50.000 13.08 0.00 0.00 2.32
5201 7282 0.234884 GTATACGAGGCGGCATTTGC 59.765 55.000 13.08 0.00 41.14 3.68
5202 7283 0.105964 TATACGAGGCGGCATTTGCT 59.894 50.000 13.08 0.00 41.70 3.91
5203 7284 1.160329 ATACGAGGCGGCATTTGCTC 61.160 55.000 13.08 0.00 41.70 4.26
5204 7285 2.238847 TACGAGGCGGCATTTGCTCT 62.239 55.000 13.08 0.00 41.70 4.09
5205 7286 2.796651 GAGGCGGCATTTGCTCTG 59.203 61.111 13.08 0.00 41.70 3.35
5206 7287 3.407046 GAGGCGGCATTTGCTCTGC 62.407 63.158 13.08 4.71 41.70 4.26
5207 7288 3.751246 GGCGGCATTTGCTCTGCA 61.751 61.111 3.07 0.00 41.47 4.41
5208 7289 2.505557 GCGGCATTTGCTCTGCAC 60.506 61.111 2.12 0.00 41.47 4.57
5209 7290 2.180017 CGGCATTTGCTCTGCACC 59.820 61.111 2.12 0.00 41.47 5.01
5210 7291 2.338015 CGGCATTTGCTCTGCACCT 61.338 57.895 2.12 0.00 41.47 4.00
5211 7292 1.870055 CGGCATTTGCTCTGCACCTT 61.870 55.000 2.12 0.00 41.47 3.50
5212 7293 0.319405 GGCATTTGCTCTGCACCTTT 59.681 50.000 2.12 0.00 41.47 3.11
5213 7294 1.270465 GGCATTTGCTCTGCACCTTTT 60.270 47.619 2.12 0.00 41.47 2.27
5214 7295 2.486918 GCATTTGCTCTGCACCTTTTT 58.513 42.857 0.00 0.00 38.71 1.94
5239 7320 3.369835 GTCGAAATGACTGGTTTAGCG 57.630 47.619 0.00 0.00 44.58 4.26
5240 7321 2.735134 GTCGAAATGACTGGTTTAGCGT 59.265 45.455 0.00 0.00 44.58 5.07
5241 7322 3.185797 GTCGAAATGACTGGTTTAGCGTT 59.814 43.478 0.00 0.00 44.58 4.84
5242 7323 3.430895 TCGAAATGACTGGTTTAGCGTTC 59.569 43.478 0.00 0.00 0.00 3.95
5243 7324 3.424433 CGAAATGACTGGTTTAGCGTTCC 60.424 47.826 0.00 0.00 0.00 3.62
5244 7325 2.851263 ATGACTGGTTTAGCGTTCCA 57.149 45.000 0.00 0.00 0.00 3.53
5250 7331 4.600012 CTGGTTTAGCGTTCCAGTAATG 57.400 45.455 10.54 0.00 42.42 1.90
5251 7332 4.250464 CTGGTTTAGCGTTCCAGTAATGA 58.750 43.478 10.54 0.00 42.42 2.57
5252 7333 4.839121 TGGTTTAGCGTTCCAGTAATGAT 58.161 39.130 0.00 0.00 0.00 2.45
5253 7334 5.250200 TGGTTTAGCGTTCCAGTAATGATT 58.750 37.500 0.00 0.00 0.00 2.57
5254 7335 5.708230 TGGTTTAGCGTTCCAGTAATGATTT 59.292 36.000 0.00 0.00 0.00 2.17
5255 7336 6.207810 TGGTTTAGCGTTCCAGTAATGATTTT 59.792 34.615 0.00 0.00 0.00 1.82
5256 7337 7.390996 TGGTTTAGCGTTCCAGTAATGATTTTA 59.609 33.333 0.00 0.00 0.00 1.52
5257 7338 8.238631 GGTTTAGCGTTCCAGTAATGATTTTAA 58.761 33.333 0.00 0.00 0.00 1.52
5258 7339 9.615295 GTTTAGCGTTCCAGTAATGATTTTAAA 57.385 29.630 0.00 0.00 0.00 1.52
5259 7340 9.834628 TTTAGCGTTCCAGTAATGATTTTAAAG 57.165 29.630 0.00 0.00 0.00 1.85
5260 7341 7.681939 AGCGTTCCAGTAATGATTTTAAAGA 57.318 32.000 0.00 0.00 0.00 2.52
5261 7342 7.527457 AGCGTTCCAGTAATGATTTTAAAGAC 58.473 34.615 0.00 0.00 0.00 3.01
5262 7343 7.174253 AGCGTTCCAGTAATGATTTTAAAGACA 59.826 33.333 0.00 0.00 0.00 3.41
5263 7344 7.968405 GCGTTCCAGTAATGATTTTAAAGACAT 59.032 33.333 0.00 4.20 0.00 3.06
5264 7345 9.277565 CGTTCCAGTAATGATTTTAAAGACATG 57.722 33.333 9.02 0.00 0.00 3.21
5265 7346 9.076596 GTTCCAGTAATGATTTTAAAGACATGC 57.923 33.333 9.02 6.66 0.00 4.06
5266 7347 7.771183 TCCAGTAATGATTTTAAAGACATGCC 58.229 34.615 9.02 0.00 0.00 4.40
5267 7348 6.980397 CCAGTAATGATTTTAAAGACATGCCC 59.020 38.462 9.02 0.00 0.00 5.36
5600 7765 6.504398 TCAGCTTAATTACCGTGATAGTCTG 58.496 40.000 0.00 0.00 0.00 3.51
5601 7766 5.175856 CAGCTTAATTACCGTGATAGTCTGC 59.824 44.000 0.00 0.00 0.00 4.26
5671 7836 2.030185 TCACTCTACGGACAGCTTCAAC 60.030 50.000 0.00 0.00 0.00 3.18
5680 7845 1.880027 GACAGCTTCAACGATTGGGTT 59.120 47.619 0.00 0.00 0.00 4.11
5864 8034 3.501950 CTTTCCTTAATCACAAAGCGGC 58.498 45.455 0.00 0.00 0.00 6.53
5905 8075 1.938625 ACACATGCAGCAACAAAACC 58.061 45.000 0.00 0.00 0.00 3.27
5911 8081 1.297664 GCAGCAACAAAACCAATGCA 58.702 45.000 0.00 0.00 41.18 3.96
5945 8115 3.117434 AGCGTAAAAATGCTGTTAGCG 57.883 42.857 0.00 0.00 46.26 4.26
5958 8128 3.360758 GCTGTTAGCGGAAAACAAAATCG 59.639 43.478 0.00 0.00 36.46 3.34
5960 8130 5.670149 TGTTAGCGGAAAACAAAATCGTA 57.330 34.783 0.00 0.00 34.04 3.43
5977 8147 1.723003 CGTAACTTACCGAGCAACCAC 59.277 52.381 0.00 0.00 0.00 4.16
6012 8182 2.975410 TGCATTTTGTCTTCTCAGCG 57.025 45.000 0.00 0.00 0.00 5.18
6015 8185 2.975851 GCATTTTGTCTTCTCAGCGTTG 59.024 45.455 0.00 0.00 0.00 4.10
6100 8271 1.209504 CTTCCCCCAGCGAGTCAAATA 59.790 52.381 0.00 0.00 0.00 1.40
6147 8318 1.257743 TAGGCCCTAGCTTATCTGCG 58.742 55.000 0.00 0.00 39.73 5.18
6154 8325 2.240279 CTAGCTTATCTGCGTACCCCT 58.760 52.381 0.00 0.00 38.13 4.79
6162 8333 0.527817 CTGCGTACCCCTGAATCGTC 60.528 60.000 0.00 0.00 0.00 4.20
6192 8363 0.811616 CGCCAACTCTATCTGGGCAC 60.812 60.000 0.00 0.00 44.82 5.01
6207 8378 3.941188 CACGGTGCCCTGTCTGGT 61.941 66.667 0.00 0.00 0.00 4.00
6238 8409 3.564133 CCCAATTCTGACCCTGATTCCAA 60.564 47.826 0.00 0.00 0.00 3.53
6338 8509 7.945033 TTTTGTTTGAATCAGTTCTTATGGC 57.055 32.000 0.00 0.00 35.33 4.40
6339 8510 6.647334 TTGTTTGAATCAGTTCTTATGGCA 57.353 33.333 0.00 0.00 35.33 4.92
6340 8511 6.839124 TGTTTGAATCAGTTCTTATGGCAT 57.161 33.333 4.88 4.88 35.33 4.40
6341 8512 6.623486 TGTTTGAATCAGTTCTTATGGCATG 58.377 36.000 10.98 0.00 35.33 4.06
6342 8513 4.906065 TGAATCAGTTCTTATGGCATGC 57.094 40.909 9.90 9.90 35.33 4.06
6343 8514 4.271661 TGAATCAGTTCTTATGGCATGCA 58.728 39.130 21.36 6.13 35.33 3.96
6344 8515 4.096833 TGAATCAGTTCTTATGGCATGCAC 59.903 41.667 21.36 9.64 35.33 4.57
6345 8516 2.368439 TCAGTTCTTATGGCATGCACC 58.632 47.619 21.36 3.15 0.00 5.01
6417 8588 5.175127 CAACCAGTTTTGCCTAGTTTTTGT 58.825 37.500 0.00 0.00 0.00 2.83
6426 8598 8.664798 GTTTTGCCTAGTTTTTGTGAAAAATCT 58.335 29.630 0.00 0.00 41.85 2.40
6505 8677 3.242944 CAGAATTACACGCGGTACTCATG 59.757 47.826 12.47 0.00 0.00 3.07
6506 8678 3.129813 AGAATTACACGCGGTACTCATGA 59.870 43.478 12.47 0.00 0.00 3.07
6507 8679 2.267188 TTACACGCGGTACTCATGAC 57.733 50.000 12.47 0.00 0.00 3.06
6547 8719 1.975660 TGTTACCTTGTCCAACCTGC 58.024 50.000 0.00 0.00 0.00 4.85
6554 8726 2.281484 GTCCAACCTGCGGCTTGA 60.281 61.111 1.94 0.00 0.00 3.02
6588 8760 2.693591 CCCGTAGAATGAGCTGAGGTTA 59.306 50.000 0.00 0.00 0.00 2.85
6682 8854 3.123050 TCTCAATCACATCCGCGTTATG 58.877 45.455 14.96 14.96 0.00 1.90
6735 8907 0.240945 CCAACCGGCATCAACACTTC 59.759 55.000 0.00 0.00 0.00 3.01
6782 8954 1.139734 CTGGACGAGACCATGACCG 59.860 63.158 0.00 0.00 39.34 4.79
6822 8994 1.890979 CTCAGCCGTGCATCATCCC 60.891 63.158 0.00 0.00 0.00 3.85
6838 9010 1.867575 TCCCTCCCCATCCTAGATCT 58.132 55.000 0.00 0.00 0.00 2.75
6865 9038 2.576615 GGAATGCCCTATTGACTGACC 58.423 52.381 0.00 0.00 0.00 4.02
6936 9109 1.467342 AGAAAATCGGTAAACTGCGGC 59.533 47.619 0.00 0.00 0.00 6.53
6994 9167 7.415877 GCATCTAAATATTTAACAACCACGGGT 60.416 37.037 9.15 0.00 37.65 5.28
7027 9200 6.386284 AGGATAAGGCTAGATTTACCTGTCT 58.614 40.000 0.00 0.00 32.92 3.41
7048 9221 1.628846 ACTGCAGTTACCGGGAATTCT 59.371 47.619 15.25 0.00 0.00 2.40
7058 9231 0.744414 CGGGAATTCTGTCGCCATGT 60.744 55.000 5.23 0.00 0.00 3.21
7061 9234 1.678728 GGAATTCTGTCGCCATGTCCA 60.679 52.381 5.23 0.00 0.00 4.02
7068 9241 3.055719 CGCCATGTCCAAGCCGTT 61.056 61.111 0.00 0.00 0.00 4.44
7084 9257 0.530650 CGTTGCGGTGATCTATGCCT 60.531 55.000 0.00 0.00 0.00 4.75
7085 9258 0.940126 GTTGCGGTGATCTATGCCTG 59.060 55.000 0.00 0.00 0.00 4.85
7088 9261 0.601311 GCGGTGATCTATGCCTGGTC 60.601 60.000 0.00 0.00 0.00 4.02
7294 9679 4.468510 TCCGTCCAAAGATAACACCTGTAT 59.531 41.667 0.00 0.00 0.00 2.29
7299 9684 4.034048 CCAAAGATAACACCTGTATCACGC 59.966 45.833 0.00 0.00 0.00 5.34
7367 9752 3.540751 CCCTGGCGCTAGCTGCTA 61.541 66.667 23.86 19.34 44.37 3.49
7403 9789 1.087771 GCGGCGCCAGTGTATACTTT 61.088 55.000 28.98 0.00 34.07 2.66
7452 9838 2.125952 TGTGCGGCACAGATCTCG 60.126 61.111 30.40 0.00 39.62 4.04
7493 9879 1.003233 GATTCCGGGTTCAACTGGACT 59.997 52.381 0.00 0.00 45.36 3.85
7506 9892 0.609131 CTGGACTCGGGTGCCAAAAT 60.609 55.000 3.82 0.00 32.62 1.82
7675 10066 0.392998 ATTACTGCTGCTCCCCGTTG 60.393 55.000 0.00 0.00 0.00 4.10
7927 10319 4.787999 CGTAAGTGGTCCGCTCTC 57.212 61.111 5.14 1.29 0.00 3.20
7928 10320 1.226323 CGTAAGTGGTCCGCTCTCG 60.226 63.158 5.14 9.78 0.00 4.04
7930 10322 0.179169 GTAAGTGGTCCGCTCTCGTC 60.179 60.000 5.14 0.00 0.00 4.20
7932 10324 1.867919 AAGTGGTCCGCTCTCGTCTG 61.868 60.000 5.14 0.00 0.00 3.51
7935 10327 2.486042 GTCCGCTCTCGTCTGACC 59.514 66.667 1.55 0.00 0.00 4.02
7936 10328 2.033602 TCCGCTCTCGTCTGACCA 59.966 61.111 1.55 0.00 0.00 4.02
7937 10329 1.602605 TCCGCTCTCGTCTGACCAA 60.603 57.895 1.55 0.00 0.00 3.67
7938 10330 1.153939 CCGCTCTCGTCTGACCAAG 60.154 63.158 1.55 0.52 0.00 3.61
7939 10331 1.803519 CGCTCTCGTCTGACCAAGC 60.804 63.158 1.55 7.76 0.00 4.01
7940 10332 1.446966 GCTCTCGTCTGACCAAGCC 60.447 63.158 1.55 0.00 0.00 4.35
7941 10333 1.967535 CTCTCGTCTGACCAAGCCA 59.032 57.895 1.55 0.00 0.00 4.75
7942 10334 0.534412 CTCTCGTCTGACCAAGCCAT 59.466 55.000 1.55 0.00 0.00 4.40
7943 10335 0.247460 TCTCGTCTGACCAAGCCATG 59.753 55.000 1.55 0.00 0.00 3.66
7944 10336 0.036952 CTCGTCTGACCAAGCCATGT 60.037 55.000 1.55 0.00 0.00 3.21
7946 10338 1.621317 TCGTCTGACCAAGCCATGTTA 59.379 47.619 1.55 0.00 0.00 2.41
7950 10360 2.002586 CTGACCAAGCCATGTTACTCG 58.997 52.381 0.00 0.00 0.00 4.18
7979 10389 3.804325 CGAGCCATGTTACTCCTGTATTG 59.196 47.826 0.00 0.00 0.00 1.90
7996 10406 5.380900 TGTATTGACAATTCAACTCACCCA 58.619 37.500 5.89 0.00 44.66 4.51
8096 10507 2.609459 CACTGATATTCCAGCCGTGTTC 59.391 50.000 0.00 0.00 37.68 3.18
8120 10531 7.224297 TCTATTTTGCTTCTAACCTGAAGTGT 58.776 34.615 6.20 0.00 43.74 3.55
8182 10596 5.525378 GTGCATAGAGTGGTTTCTTGATAGG 59.475 44.000 0.00 0.00 0.00 2.57
8186 10600 3.589288 AGAGTGGTTTCTTGATAGGGCTT 59.411 43.478 0.00 0.00 0.00 4.35
8190 10604 5.014228 AGTGGTTTCTTGATAGGGCTTAACT 59.986 40.000 0.00 0.00 0.00 2.24
8358 10805 0.757935 AGGGCGATAGTAAGGGCGAA 60.758 55.000 0.00 0.00 39.35 4.70
8382 10832 5.424573 ACCAAGTTACTACTGGATTAGTCCC 59.575 44.000 9.81 0.00 44.41 4.46
8403 10853 5.133660 TCCCAGGGTGTATAACATAAGCATT 59.866 40.000 5.01 0.00 0.00 3.56
8422 10872 5.069516 AGCATTACCTAATGAATTTGCCTGG 59.930 40.000 8.90 0.00 44.40 4.45
8598 11050 0.609131 AGTACCACTGCATGCCAACC 60.609 55.000 16.68 0.00 0.00 3.77
8602 11054 1.290955 CACTGCATGCCAACCCAAG 59.709 57.895 16.68 6.30 0.00 3.61
8605 11057 2.999063 GCATGCCAACCCAAGCCT 60.999 61.111 6.36 0.00 0.00 4.58
8725 11177 1.300697 GACTTCCGCTCGTGGTTGT 60.301 57.895 0.00 0.00 0.00 3.32
8738 11190 5.559417 GCTCGTGGTTGTCGATTTAAAGAAA 60.559 40.000 0.00 0.00 36.73 2.52
8864 11318 4.701651 TGCTATCATTGCTGTAGCTTTTGT 59.298 37.500 5.38 0.00 41.01 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 5.128335 CAGGACCTAACTTATCCCGTAACTT 59.872 44.000 0.00 0.00 32.47 2.66
105 108 6.464465 GCATCTCTAGCTAATCCCCTAAAACA 60.464 42.308 0.00 0.00 0.00 2.83
159 162 6.710597 AGTGTCGCTCTTATTCCTATAACA 57.289 37.500 0.00 0.00 0.00 2.41
237 261 2.007049 GCACTGGTAATGAGTGGGTCG 61.007 57.143 0.00 0.00 41.08 4.79
264 345 4.562757 CCTGATGAAACTAAAGACGACCCA 60.563 45.833 0.00 0.00 0.00 4.51
309 390 1.230635 ACGAGCAGCGCAAGAACAAT 61.231 50.000 11.47 0.00 46.04 2.71
332 413 0.613853 ATGGCCAAGCATGCTGAAGT 60.614 50.000 23.48 1.42 0.00 3.01
432 527 3.342377 TTGGTGGATCATAACAGCGAA 57.658 42.857 0.00 0.00 37.89 4.70
485 580 0.107017 ATGAATCGGCTGTCCCCAAG 60.107 55.000 0.00 0.00 0.00 3.61
504 599 3.798515 ACCAACCTAGACCAGTAATCCA 58.201 45.455 0.00 0.00 0.00 3.41
510 605 5.836024 TGATTAAACCAACCTAGACCAGT 57.164 39.130 0.00 0.00 0.00 4.00
518 613 4.776837 TCCAATGCATGATTAAACCAACCT 59.223 37.500 0.00 0.00 0.00 3.50
527 625 0.943673 CCGCGTCCAATGCATGATTA 59.056 50.000 4.92 0.00 0.00 1.75
580 678 1.139058 CGTCTAGGCTGGCCACTATTT 59.861 52.381 14.39 0.00 38.92 1.40
596 699 2.476873 CGCTATGAGTAACAGCGTCT 57.523 50.000 7.02 0.00 43.00 4.18
702 2560 3.857157 AAGCAAGGGACTAGTTCACAA 57.143 42.857 2.92 0.00 38.49 3.33
703 2561 3.857157 AAAGCAAGGGACTAGTTCACA 57.143 42.857 2.92 0.00 38.49 3.58
722 2580 4.887071 ACTGGCATGACTAGTTCACAAAAA 59.113 37.500 0.00 0.00 36.55 1.94
723 2581 4.460263 ACTGGCATGACTAGTTCACAAAA 58.540 39.130 0.00 0.00 36.55 2.44
724 2582 4.085357 ACTGGCATGACTAGTTCACAAA 57.915 40.909 0.00 0.00 36.55 2.83
725 2583 3.769739 ACTGGCATGACTAGTTCACAA 57.230 42.857 0.00 0.00 36.55 3.33
726 2584 3.070878 TCAACTGGCATGACTAGTTCACA 59.929 43.478 11.91 0.00 46.19 3.58
727 2585 3.664107 TCAACTGGCATGACTAGTTCAC 58.336 45.455 11.91 0.00 46.19 3.18
728 2586 4.065088 GTTCAACTGGCATGACTAGTTCA 58.935 43.478 11.91 0.00 46.19 3.18
729 2587 4.319177 AGTTCAACTGGCATGACTAGTTC 58.681 43.478 11.91 4.10 46.19 3.01
731 2589 3.307059 GGAGTTCAACTGGCATGACTAGT 60.307 47.826 0.00 0.00 42.87 2.57
732 2590 3.265791 GGAGTTCAACTGGCATGACTAG 58.734 50.000 0.00 0.00 0.00 2.57
733 2591 2.353704 CGGAGTTCAACTGGCATGACTA 60.354 50.000 0.00 0.00 0.00 2.59
734 2592 1.609061 CGGAGTTCAACTGGCATGACT 60.609 52.381 0.00 0.00 0.00 3.41
735 2593 0.798776 CGGAGTTCAACTGGCATGAC 59.201 55.000 0.00 0.00 0.00 3.06
736 2594 0.321564 CCGGAGTTCAACTGGCATGA 60.322 55.000 0.00 0.00 0.00 3.07
737 2595 2.174334 CCGGAGTTCAACTGGCATG 58.826 57.895 0.00 0.00 0.00 4.06
738 2596 4.722193 CCGGAGTTCAACTGGCAT 57.278 55.556 0.00 0.00 0.00 4.40
741 2599 3.423154 GCGCCGGAGTTCAACTGG 61.423 66.667 5.05 0.00 36.91 4.00
742 2600 1.781025 TTTGCGCCGGAGTTCAACTG 61.781 55.000 5.05 0.00 0.00 3.16
743 2601 1.507141 CTTTGCGCCGGAGTTCAACT 61.507 55.000 5.05 0.00 0.00 3.16
744 2602 1.082104 CTTTGCGCCGGAGTTCAAC 60.082 57.895 5.05 0.00 0.00 3.18
745 2603 1.098712 AACTTTGCGCCGGAGTTCAA 61.099 50.000 5.05 0.00 0.00 2.69
746 2604 1.098712 AAACTTTGCGCCGGAGTTCA 61.099 50.000 5.05 0.00 32.79 3.18
747 2605 0.385598 GAAACTTTGCGCCGGAGTTC 60.386 55.000 5.05 7.36 32.79 3.01
748 2606 1.098712 TGAAACTTTGCGCCGGAGTT 61.099 50.000 5.05 9.66 35.27 3.01
749 2607 1.098712 TTGAAACTTTGCGCCGGAGT 61.099 50.000 5.05 2.87 0.00 3.85
750 2608 0.030101 TTTGAAACTTTGCGCCGGAG 59.970 50.000 5.05 1.55 0.00 4.63
751 2609 0.030101 CTTTGAAACTTTGCGCCGGA 59.970 50.000 5.05 0.00 0.00 5.14
752 2610 0.939106 CCTTTGAAACTTTGCGCCGG 60.939 55.000 4.18 0.00 0.00 6.13
753 2611 0.030101 TCCTTTGAAACTTTGCGCCG 59.970 50.000 4.18 0.00 0.00 6.46
754 2612 2.438868 ATCCTTTGAAACTTTGCGCC 57.561 45.000 4.18 0.00 0.00 6.53
755 2613 2.405025 CGAATCCTTTGAAACTTTGCGC 59.595 45.455 0.00 0.00 0.00 6.09
756 2614 3.884169 TCGAATCCTTTGAAACTTTGCG 58.116 40.909 0.00 0.00 0.00 4.85
757 2615 3.670523 GCTCGAATCCTTTGAAACTTTGC 59.329 43.478 0.00 0.00 0.00 3.68
758 2616 4.229876 GGCTCGAATCCTTTGAAACTTTG 58.770 43.478 0.00 0.00 0.00 2.77
759 2617 3.058224 CGGCTCGAATCCTTTGAAACTTT 60.058 43.478 2.40 0.00 0.00 2.66
760 2618 2.484264 CGGCTCGAATCCTTTGAAACTT 59.516 45.455 2.40 0.00 0.00 2.66
761 2619 2.076863 CGGCTCGAATCCTTTGAAACT 58.923 47.619 2.40 0.00 0.00 2.66
762 2620 1.804748 ACGGCTCGAATCCTTTGAAAC 59.195 47.619 1.50 0.00 0.00 2.78
763 2621 2.178912 ACGGCTCGAATCCTTTGAAA 57.821 45.000 1.50 0.00 0.00 2.69
764 2622 2.073816 GAACGGCTCGAATCCTTTGAA 58.926 47.619 1.50 0.00 0.00 2.69
765 2623 1.001520 TGAACGGCTCGAATCCTTTGA 59.998 47.619 1.50 0.00 0.00 2.69
766 2624 1.438651 TGAACGGCTCGAATCCTTTG 58.561 50.000 1.50 0.00 0.00 2.77
767 2625 2.178912 TTGAACGGCTCGAATCCTTT 57.821 45.000 1.50 0.00 0.00 3.11
768 2626 2.178912 TTTGAACGGCTCGAATCCTT 57.821 45.000 1.50 0.00 0.00 3.36
769 2627 1.804748 GTTTTGAACGGCTCGAATCCT 59.195 47.619 1.50 0.00 0.00 3.24
770 2628 2.242769 GTTTTGAACGGCTCGAATCC 57.757 50.000 1.50 0.00 0.00 3.01
802 2660 1.210722 AGGATTTTCGAAGGCTCTCCC 59.789 52.381 0.00 0.00 0.00 4.30
803 2661 2.556257 GAGGATTTTCGAAGGCTCTCC 58.444 52.381 0.00 2.05 0.00 3.71
804 2662 2.556257 GGAGGATTTTCGAAGGCTCTC 58.444 52.381 0.00 5.20 0.00 3.20
805 2663 1.210722 GGGAGGATTTTCGAAGGCTCT 59.789 52.381 0.00 0.00 0.00 4.09
806 2664 1.669604 GGGAGGATTTTCGAAGGCTC 58.330 55.000 0.00 0.00 0.00 4.70
807 2665 0.256177 GGGGAGGATTTTCGAAGGCT 59.744 55.000 0.00 0.00 0.00 4.58
808 2666 0.034477 TGGGGAGGATTTTCGAAGGC 60.034 55.000 0.00 0.00 0.00 4.35
809 2667 2.507407 TTGGGGAGGATTTTCGAAGG 57.493 50.000 0.00 0.00 0.00 3.46
810 2668 3.381590 GGATTTGGGGAGGATTTTCGAAG 59.618 47.826 0.00 0.00 0.00 3.79
853 2711 1.770518 GGGTGGGGGATCGATTCCT 60.771 63.158 22.31 0.00 44.75 3.36
944 2816 2.286365 TTTGAAATCGACTGGGGCTT 57.714 45.000 0.00 0.00 0.00 4.35
946 2818 1.064060 CGATTTGAAATCGACTGGGGC 59.936 52.381 30.25 0.00 43.59 5.80
952 2829 1.512913 GCGCGCGATTTGAAATCGAC 61.513 55.000 35.81 26.25 43.59 4.20
997 2875 4.530857 GTCGCCCACCTCCATCGG 62.531 72.222 0.00 0.00 0.00 4.18
1048 2926 3.483869 GGGCTCATCGGGCTTCCT 61.484 66.667 0.00 0.00 0.00 3.36
1090 2968 2.270205 CTGGACCTGCTTGGCGAT 59.730 61.111 0.00 0.00 40.22 4.58
1160 3038 1.408405 GGCTAGGGTTAGGGTTTGCTC 60.408 57.143 0.00 0.00 0.00 4.26
1182 3063 2.540383 CCGATGGAGGAATGAGGGATA 58.460 52.381 0.00 0.00 0.00 2.59
1190 3072 1.341531 CGTAGAAGCCGATGGAGGAAT 59.658 52.381 0.00 0.00 0.00 3.01
1191 3073 0.744874 CGTAGAAGCCGATGGAGGAA 59.255 55.000 0.00 0.00 0.00 3.36
1195 3080 0.745486 TCGACGTAGAAGCCGATGGA 60.745 55.000 0.00 0.00 0.00 3.41
1208 3093 2.034879 ACACGGTATCGGTCGACGT 61.035 57.895 9.92 0.00 44.69 4.34
1418 3320 0.318441 AGAGCTTGTAGAACTGCGCA 59.682 50.000 10.98 10.98 0.00 6.09
1528 3430 4.509230 GGATGTATGCATACACTGACACTG 59.491 45.833 35.53 0.00 45.11 3.66
1543 3445 2.036958 TCCAAGCAACCGGATGTATG 57.963 50.000 9.46 10.18 0.00 2.39
1547 3449 1.402968 CAGATTCCAAGCAACCGGATG 59.597 52.381 9.46 8.33 0.00 3.51
1634 3543 1.606668 CAAGCTTTCAGTAAACGGGCA 59.393 47.619 0.00 0.00 0.00 5.36
1724 3633 4.232188 ACAAGATCAGTTCCATCTGCAT 57.768 40.909 0.00 0.00 35.63 3.96
1731 3640 5.827797 AGTTTGCTAAACAAGATCAGTTCCA 59.172 36.000 12.28 1.27 43.79 3.53
1749 3658 2.446435 TGAGGATAGGCCAAAGTTTGC 58.554 47.619 5.01 5.86 40.02 3.68
1750 3659 5.185635 TGAAATGAGGATAGGCCAAAGTTTG 59.814 40.000 5.01 8.73 40.02 2.93
1753 3662 4.018050 ACTGAAATGAGGATAGGCCAAAGT 60.018 41.667 5.01 0.00 40.02 2.66
1754 3663 4.337555 CACTGAAATGAGGATAGGCCAAAG 59.662 45.833 5.01 0.00 40.02 2.77
1768 3677 3.838120 TCTGCTACGACTCACTGAAATG 58.162 45.455 0.00 0.00 0.00 2.32
1771 3680 2.351835 GCTTCTGCTACGACTCACTGAA 60.352 50.000 0.00 0.00 36.03 3.02
1773 3682 1.068264 TGCTTCTGCTACGACTCACTG 60.068 52.381 0.00 0.00 40.48 3.66
1775 3684 1.923204 CATGCTTCTGCTACGACTCAC 59.077 52.381 0.00 0.00 40.48 3.51
1776 3685 1.546029 ACATGCTTCTGCTACGACTCA 59.454 47.619 0.00 0.00 40.48 3.41
1782 3691 8.336080 GGTTACTAAATTACATGCTTCTGCTAC 58.664 37.037 0.00 0.00 40.48 3.58
1806 3715 8.275187 TGTGATTCACAAATATATAGAGGGGT 57.725 34.615 16.95 0.00 41.69 4.95
1824 3733 9.508567 GGTAAGCAGATAGAAAAATTGTGATTC 57.491 33.333 0.00 0.00 0.00 2.52
1875 3789 8.514594 TCTGAAATCCAAACAATGTAATCACTC 58.485 33.333 0.00 0.00 0.00 3.51
1955 3872 5.622448 GTCATCATTACGCATAAGCAACATG 59.378 40.000 0.00 0.00 42.27 3.21
1969 3886 7.044181 TCTTCACATTCCTGAGTCATCATTAC 58.956 38.462 0.00 0.00 34.12 1.89
1979 3896 5.755813 CAACAAGTTCTTCACATTCCTGAG 58.244 41.667 0.00 0.00 0.00 3.35
2181 4098 5.204292 ACTGGACTAAGAGCACTCATGATA 58.796 41.667 0.00 0.00 0.00 2.15
2262 4179 5.554070 TCATCGATGCCAGAATCATTATGT 58.446 37.500 20.81 0.00 0.00 2.29
2277 4194 6.600246 ACAACATCTTCTGAATCATCGATG 57.400 37.500 19.61 19.61 35.58 3.84
2322 4239 4.664150 TTTTCCATCCCTTGTTGTCAAC 57.336 40.909 8.86 8.86 0.00 3.18
2545 4462 4.253685 TGTAATAGGAACTTCAGTGCAGC 58.746 43.478 0.00 0.00 41.75 5.25
2661 4578 0.543749 ATCCAGCTAGAACCAGCACC 59.456 55.000 0.00 0.00 44.35 5.01
2721 4638 6.053005 CCATTTACATACCCACTACGTTCAT 58.947 40.000 0.00 0.00 0.00 2.57
2783 4700 7.124901 AGTTTGGATAAGTCTAATCTGCTCTGA 59.875 37.037 0.00 0.00 0.00 3.27
2915 4840 8.855804 AAGGTAGGTAAGGATGAGATAGAAAA 57.144 34.615 0.00 0.00 0.00 2.29
3203 5277 9.769093 GGTGTGACTTATATCATTTGTGTAAAC 57.231 33.333 0.00 0.00 0.00 2.01
3249 5323 2.673200 GCAGGAGCATCTGGACCCA 61.673 63.158 8.13 0.00 41.58 4.51
3265 5339 1.908619 ACATGTGTGGTCCAGATAGCA 59.091 47.619 0.00 0.00 0.00 3.49
3369 5443 2.654749 TACACTGGAGATTCACTGCG 57.345 50.000 0.00 0.00 39.87 5.18
3374 5448 1.403647 CGGCGTTACACTGGAGATTCA 60.404 52.381 0.00 0.00 0.00 2.57
3383 5457 1.246056 TACTGGAGCGGCGTTACACT 61.246 55.000 3.93 0.00 0.00 3.55
3436 5510 2.426023 GGTGTTCCAGTCGTGGCT 59.574 61.111 0.00 0.00 44.60 4.75
3442 5516 2.754946 TACAATCCGGTGTTCCAGTC 57.245 50.000 0.00 0.00 32.75 3.51
3449 5523 2.738314 GCTAACGTTTACAATCCGGTGT 59.262 45.455 5.91 1.27 35.43 4.16
3466 5540 9.845740 TTGTAAATATCTAGCTTTGATGGCTAA 57.154 29.630 10.88 0.00 41.02 3.09
3467 5541 9.273016 GTTGTAAATATCTAGCTTTGATGGCTA 57.727 33.333 10.88 0.00 40.74 3.93
3520 5594 3.932710 TGGATGAACTTAATCGTGCAGAC 59.067 43.478 0.00 0.00 32.56 3.51
3572 5648 3.322541 GGGGAAGGATGAGCTAGAACTAC 59.677 52.174 0.00 0.00 0.00 2.73
3711 5787 1.403679 CTGCGAGTGTTTTGTTTCCCA 59.596 47.619 0.00 0.00 0.00 4.37
3728 5804 0.680921 TACAGGGGAATTGCAGCTGC 60.681 55.000 31.89 31.89 42.50 5.25
3760 5836 2.404566 TAGCAAAGTGGCGGCTGGAA 62.405 55.000 11.43 0.00 38.55 3.53
3827 5903 5.491982 GAAGAGGAGACTTAGATGCCAAAA 58.508 41.667 0.00 0.00 44.43 2.44
3828 5904 4.382040 CGAAGAGGAGACTTAGATGCCAAA 60.382 45.833 0.00 0.00 44.43 3.28
3829 5905 3.131223 CGAAGAGGAGACTTAGATGCCAA 59.869 47.826 0.00 0.00 44.43 4.52
3934 6010 4.471386 ACAGAGCCAGATTACATACTTGGT 59.529 41.667 0.00 0.00 0.00 3.67
4064 6140 0.108019 ACACGGGGGAGAAAGTTCAC 59.892 55.000 0.00 0.00 0.00 3.18
4159 6236 9.136952 GGGTGACAATATACGACTTATGTTATC 57.863 37.037 0.00 0.00 0.00 1.75
4181 6258 0.106719 ACTTGTGGTTGACTGGGGTG 60.107 55.000 0.00 0.00 0.00 4.61
4199 6276 3.003378 GCTGTGAAAGGTTAGTTGTGGAC 59.997 47.826 0.00 0.00 0.00 4.02
4239 6316 0.975887 GGCTGGGGCTTGAAATTCAA 59.024 50.000 8.25 8.25 38.73 2.69
4240 6317 0.114954 AGGCTGGGGCTTGAAATTCA 59.885 50.000 0.00 0.00 33.67 2.57
4241 6318 1.269958 AAGGCTGGGGCTTGAAATTC 58.730 50.000 5.57 0.00 46.51 2.17
4242 6319 3.481493 AAGGCTGGGGCTTGAAATT 57.519 47.368 5.57 0.00 46.51 1.82
4249 6326 1.617536 TCATCTGAAGGCTGGGGCT 60.618 57.895 0.00 0.00 41.24 5.19
4250 6327 1.153005 CTCATCTGAAGGCTGGGGC 60.153 63.158 0.00 0.00 37.82 5.80
4251 6328 1.138568 ATCTCATCTGAAGGCTGGGG 58.861 55.000 0.00 0.00 0.00 4.96
4252 6329 2.438763 AGAATCTCATCTGAAGGCTGGG 59.561 50.000 0.00 0.00 0.00 4.45
4253 6330 3.842007 AGAATCTCATCTGAAGGCTGG 57.158 47.619 0.00 0.00 0.00 4.85
4254 6331 4.515361 ACAAGAATCTCATCTGAAGGCTG 58.485 43.478 0.00 0.00 0.00 4.85
4255 6332 4.840716 ACAAGAATCTCATCTGAAGGCT 57.159 40.909 0.00 0.00 0.00 4.58
4256 6333 4.335037 GGAACAAGAATCTCATCTGAAGGC 59.665 45.833 0.00 0.00 0.00 4.35
4257 6334 5.494724 TGGAACAAGAATCTCATCTGAAGG 58.505 41.667 0.00 0.00 31.92 3.46
4258 6335 5.585445 CCTGGAACAAGAATCTCATCTGAAG 59.415 44.000 0.00 0.00 38.70 3.02
4259 6336 5.494724 CCTGGAACAAGAATCTCATCTGAA 58.505 41.667 0.00 0.00 38.70 3.02
4260 6337 4.080695 CCCTGGAACAAGAATCTCATCTGA 60.081 45.833 0.00 0.00 38.70 3.27
4261 6338 4.080695 TCCCTGGAACAAGAATCTCATCTG 60.081 45.833 0.00 0.00 38.70 2.90
4262 6339 4.107072 TCCCTGGAACAAGAATCTCATCT 58.893 43.478 0.00 0.00 38.70 2.90
4263 6340 4.494091 TCCCTGGAACAAGAATCTCATC 57.506 45.455 0.00 0.00 38.70 2.92
4264 6341 4.789807 CATCCCTGGAACAAGAATCTCAT 58.210 43.478 0.00 0.00 38.70 2.90
4265 6342 3.623203 GCATCCCTGGAACAAGAATCTCA 60.623 47.826 0.00 0.00 38.70 3.27
4266 6343 2.948315 GCATCCCTGGAACAAGAATCTC 59.052 50.000 0.00 0.00 38.70 2.75
4267 6344 2.309755 TGCATCCCTGGAACAAGAATCT 59.690 45.455 0.00 0.00 38.70 2.40
4317 6394 3.788227 AAGGAACACCATAAGAGTGCA 57.212 42.857 0.00 0.00 38.87 4.57
4328 6405 2.288213 GGCTAAGCACAAAAGGAACACC 60.288 50.000 0.00 0.00 0.00 4.16
4373 6450 1.324740 TTATGGACCCGGTGGAGACG 61.325 60.000 0.00 0.00 34.81 4.18
4476 6553 2.401583 TGATGCGGACAGTATTTGCT 57.598 45.000 0.00 0.00 0.00 3.91
4509 6586 3.670311 TTTAGTGCGTTTGTTGCGTTA 57.330 38.095 0.00 0.00 34.24 3.18
4548 6625 7.655732 GGATTGAAGCTGCTAAAAAGGTAAAAA 59.344 33.333 0.90 0.00 0.00 1.94
4549 6626 7.015195 AGGATTGAAGCTGCTAAAAAGGTAAAA 59.985 33.333 0.90 0.00 0.00 1.52
4550 6627 6.493458 AGGATTGAAGCTGCTAAAAAGGTAAA 59.507 34.615 0.90 0.00 0.00 2.01
4590 6667 5.005094 TCATTGCAACAATGATCACAGAGA 58.995 37.500 16.82 0.00 32.21 3.10
4591 6668 5.305139 TCATTGCAACAATGATCACAGAG 57.695 39.130 16.82 0.00 32.21 3.35
4613 6690 3.056821 TCGTCAGACCTTGATTTCGACAT 60.057 43.478 0.00 0.00 38.29 3.06
4614 6691 2.295070 TCGTCAGACCTTGATTTCGACA 59.705 45.455 0.00 0.00 38.29 4.35
4629 6706 0.667993 GGAGGCAGAGAGATCGTCAG 59.332 60.000 1.55 0.00 0.00 3.51
4637 6714 4.442753 GGAAGAACTAATGGAGGCAGAGAG 60.443 50.000 0.00 0.00 0.00 3.20
4730 6808 0.969149 AGACCGACATGTTCAGCTGA 59.031 50.000 13.74 13.74 0.00 4.26
4731 6809 1.073964 CAGACCGACATGTTCAGCTG 58.926 55.000 7.63 7.63 0.00 4.24
4732 6810 0.969149 TCAGACCGACATGTTCAGCT 59.031 50.000 0.00 0.00 0.00 4.24
4733 6811 1.795768 TTCAGACCGACATGTTCAGC 58.204 50.000 0.00 0.00 0.00 4.26
4734 6812 3.058914 GGTTTTCAGACCGACATGTTCAG 60.059 47.826 0.00 0.00 0.00 3.02
4735 6813 2.875933 GGTTTTCAGACCGACATGTTCA 59.124 45.455 0.00 0.00 0.00 3.18
4737 6815 2.227194 GGGTTTTCAGACCGACATGTT 58.773 47.619 0.00 0.00 40.75 2.71
4738 6816 1.142060 TGGGTTTTCAGACCGACATGT 59.858 47.619 0.00 0.00 40.75 3.21
4840 6921 8.249638 CAGAGATAGATCAAATGGTATCGATGT 58.750 37.037 8.54 0.00 0.00 3.06
4861 6942 3.242641 CGATCGTTACGGTGATTCAGAGA 60.243 47.826 7.03 0.00 0.00 3.10
4867 6948 3.989167 TGTTTTCGATCGTTACGGTGATT 59.011 39.130 15.94 0.00 0.00 2.57
4915 6996 3.562973 CCATACTCATCCATGCACAGTTC 59.437 47.826 0.00 0.00 0.00 3.01
4923 7004 3.144506 GGTTCTGCCATACTCATCCATG 58.855 50.000 0.00 0.00 37.17 3.66
5068 7149 4.105217 TGGGCTTTGATGATAGGATGACAT 59.895 41.667 0.00 0.00 0.00 3.06
5070 7151 4.090761 TGGGCTTTGATGATAGGATGAC 57.909 45.455 0.00 0.00 0.00 3.06
5141 7222 5.422214 AACGTGAATTCAGGGAGAAGTAT 57.578 39.130 26.86 5.63 40.15 2.12
5156 7237 1.595929 GGTGAGGCCGAAACGTGAA 60.596 57.895 0.00 0.00 0.00 3.18
5160 7241 2.027625 GTCTGGTGAGGCCGAAACG 61.028 63.158 0.00 0.00 41.21 3.60
5161 7242 1.671379 GGTCTGGTGAGGCCGAAAC 60.671 63.158 0.00 0.00 41.21 2.78
5162 7243 2.747686 GGTCTGGTGAGGCCGAAA 59.252 61.111 0.00 0.00 41.21 3.46
5166 7247 0.839946 ATACATGGTCTGGTGAGGCC 59.160 55.000 0.00 0.00 45.30 5.19
5167 7248 2.545952 CGTATACATGGTCTGGTGAGGC 60.546 54.545 3.32 0.00 0.00 4.70
5168 7249 2.956333 TCGTATACATGGTCTGGTGAGG 59.044 50.000 3.32 0.00 0.00 3.86
5169 7250 3.004839 CCTCGTATACATGGTCTGGTGAG 59.995 52.174 3.32 0.00 0.00 3.51
5170 7251 2.956333 CCTCGTATACATGGTCTGGTGA 59.044 50.000 3.32 0.00 0.00 4.02
5171 7252 2.545952 GCCTCGTATACATGGTCTGGTG 60.546 54.545 3.32 0.00 0.00 4.17
5172 7253 1.687123 GCCTCGTATACATGGTCTGGT 59.313 52.381 3.32 0.00 0.00 4.00
5173 7254 1.335964 CGCCTCGTATACATGGTCTGG 60.336 57.143 3.32 0.00 0.00 3.86
5174 7255 1.335964 CCGCCTCGTATACATGGTCTG 60.336 57.143 3.32 0.00 0.00 3.51
5175 7256 0.959553 CCGCCTCGTATACATGGTCT 59.040 55.000 3.32 0.00 0.00 3.85
5176 7257 0.666577 GCCGCCTCGTATACATGGTC 60.667 60.000 3.32 0.83 0.00 4.02
5177 7258 1.366366 GCCGCCTCGTATACATGGT 59.634 57.895 3.32 0.00 0.00 3.55
5178 7259 0.037326 ATGCCGCCTCGTATACATGG 60.037 55.000 3.32 5.31 0.00 3.66
5179 7260 1.795768 AATGCCGCCTCGTATACATG 58.204 50.000 3.32 0.00 0.00 3.21
5180 7261 2.143122 CAAATGCCGCCTCGTATACAT 58.857 47.619 3.32 0.00 0.00 2.29
5181 7262 1.577468 CAAATGCCGCCTCGTATACA 58.423 50.000 3.32 0.00 0.00 2.29
5182 7263 0.234884 GCAAATGCCGCCTCGTATAC 59.765 55.000 0.00 0.00 34.31 1.47
5183 7264 0.105964 AGCAAATGCCGCCTCGTATA 59.894 50.000 0.94 0.00 43.38 1.47
5184 7265 1.153168 AGCAAATGCCGCCTCGTAT 60.153 52.632 0.94 0.00 43.38 3.06
5185 7266 1.813753 GAGCAAATGCCGCCTCGTA 60.814 57.895 0.94 0.00 43.38 3.43
5186 7267 3.127533 GAGCAAATGCCGCCTCGT 61.128 61.111 0.94 0.00 43.38 4.18
5187 7268 2.821366 AGAGCAAATGCCGCCTCG 60.821 61.111 0.94 0.00 43.38 4.63
5188 7269 2.796651 CAGAGCAAATGCCGCCTC 59.203 61.111 0.94 0.00 43.38 4.70
5189 7270 3.446570 GCAGAGCAAATGCCGCCT 61.447 61.111 0.94 0.00 43.38 5.52
5190 7271 3.751246 TGCAGAGCAAATGCCGCC 61.751 61.111 0.94 0.00 43.18 6.13
5191 7272 2.505557 GTGCAGAGCAAATGCCGC 60.506 61.111 0.94 3.61 41.47 6.53
5192 7273 1.870055 AAGGTGCAGAGCAAATGCCG 61.870 55.000 0.94 0.00 41.47 5.69
5193 7274 0.319405 AAAGGTGCAGAGCAAATGCC 59.681 50.000 0.94 0.00 41.47 4.40
5194 7275 2.159327 AAAAGGTGCAGAGCAAATGC 57.841 45.000 0.00 0.00 41.47 3.56
5219 7300 2.735134 ACGCTAAACCAGTCATTTCGAC 59.265 45.455 0.00 0.00 45.77 4.20
5220 7301 3.034721 ACGCTAAACCAGTCATTTCGA 57.965 42.857 0.00 0.00 0.00 3.71
5221 7302 3.424433 GGAACGCTAAACCAGTCATTTCG 60.424 47.826 0.00 0.00 0.00 3.46
5222 7303 3.500680 TGGAACGCTAAACCAGTCATTTC 59.499 43.478 0.00 0.00 0.00 2.17
5223 7304 3.482436 TGGAACGCTAAACCAGTCATTT 58.518 40.909 0.00 0.00 0.00 2.32
5224 7305 3.074412 CTGGAACGCTAAACCAGTCATT 58.926 45.455 0.00 0.00 44.06 2.57
5225 7306 2.699954 CTGGAACGCTAAACCAGTCAT 58.300 47.619 0.00 0.00 44.06 3.06
5226 7307 2.163818 CTGGAACGCTAAACCAGTCA 57.836 50.000 0.00 0.00 44.06 3.41
5230 7311 4.274602 TCATTACTGGAACGCTAAACCA 57.725 40.909 0.00 0.00 0.00 3.67
5231 7312 5.813080 AATCATTACTGGAACGCTAAACC 57.187 39.130 0.00 0.00 0.00 3.27
5232 7313 9.615295 TTTAAAATCATTACTGGAACGCTAAAC 57.385 29.630 0.00 0.00 0.00 2.01
5233 7314 9.834628 CTTTAAAATCATTACTGGAACGCTAAA 57.165 29.630 0.00 0.00 0.00 1.85
5234 7315 9.221933 TCTTTAAAATCATTACTGGAACGCTAA 57.778 29.630 0.00 0.00 0.00 3.09
5235 7316 8.662141 GTCTTTAAAATCATTACTGGAACGCTA 58.338 33.333 0.00 0.00 0.00 4.26
5236 7317 7.174253 TGTCTTTAAAATCATTACTGGAACGCT 59.826 33.333 0.00 0.00 0.00 5.07
5237 7318 7.302524 TGTCTTTAAAATCATTACTGGAACGC 58.697 34.615 0.00 0.00 0.00 4.84
5238 7319 9.277565 CATGTCTTTAAAATCATTACTGGAACG 57.722 33.333 3.11 0.00 0.00 3.95
5239 7320 9.076596 GCATGTCTTTAAAATCATTACTGGAAC 57.923 33.333 0.00 0.00 0.00 3.62
5240 7321 8.250332 GGCATGTCTTTAAAATCATTACTGGAA 58.750 33.333 0.00 0.00 0.00 3.53
5241 7322 7.147915 GGGCATGTCTTTAAAATCATTACTGGA 60.148 37.037 0.00 0.00 0.00 3.86
5242 7323 6.980397 GGGCATGTCTTTAAAATCATTACTGG 59.020 38.462 0.00 0.00 0.00 4.00
5243 7324 7.992180 GGGCATGTCTTTAAAATCATTACTG 57.008 36.000 0.00 0.00 0.00 2.74
5610 7775 9.715121 ATCACAAATAAAGAATTTTGCACATCT 57.285 25.926 0.00 0.00 40.09 2.90
5645 7810 4.576216 AGCTGTCCGTAGAGTGATTATG 57.424 45.455 0.00 0.00 0.00 1.90
5652 7817 1.068472 CGTTGAAGCTGTCCGTAGAGT 60.068 52.381 0.00 0.00 0.00 3.24
5671 7836 2.355756 CCAGTGCAATAGAACCCAATCG 59.644 50.000 0.00 0.00 0.00 3.34
5680 7845 5.450818 AGGGTAAAATCCAGTGCAATAGA 57.549 39.130 0.00 0.00 0.00 1.98
5733 7901 5.562506 TCTACTATCTTGTGTTCGGTCAG 57.437 43.478 0.00 0.00 0.00 3.51
5743 7911 3.134804 GCCACCCACATCTACTATCTTGT 59.865 47.826 0.00 0.00 0.00 3.16
5891 8061 1.297664 GCATTGGTTTTGTTGCTGCA 58.702 45.000 0.00 0.00 32.41 4.41
5905 8075 1.139163 GCCCTTGTTCGTTTGCATTG 58.861 50.000 0.00 0.00 0.00 2.82
5911 8081 0.533308 TACGCTGCCCTTGTTCGTTT 60.533 50.000 0.00 0.00 34.97 3.60
5945 8115 6.657888 TCGGTAAGTTACGATTTTGTTTTCC 58.342 36.000 6.94 0.00 33.69 3.13
5958 8128 2.735134 CTGTGGTTGCTCGGTAAGTTAC 59.265 50.000 4.32 4.32 0.00 2.50
5960 8130 1.414919 TCTGTGGTTGCTCGGTAAGTT 59.585 47.619 0.00 0.00 0.00 2.66
5977 8147 0.607217 TGCATGCAGGAAGTGGTCTG 60.607 55.000 18.46 0.00 0.00 3.51
6012 8182 1.594331 ACGGAAAAGGCAGTCTCAAC 58.406 50.000 0.00 0.00 0.00 3.18
6015 8185 3.528597 AGATACGGAAAAGGCAGTCTC 57.471 47.619 0.00 0.00 0.00 3.36
6119 8290 2.694397 AGCTAGGGCCTAATGTGATCA 58.306 47.619 15.43 0.00 39.73 2.92
6147 8318 0.824759 AGCAGACGATTCAGGGGTAC 59.175 55.000 0.00 0.00 0.00 3.34
6154 8325 1.900351 CCCTGGAGCAGACGATTCA 59.100 57.895 0.00 0.00 32.44 2.57
6199 8370 1.302832 GGAAGCACCCACCAGACAG 60.303 63.158 0.00 0.00 0.00 3.51
6221 8392 3.394274 TCTGTTTGGAATCAGGGTCAGAA 59.606 43.478 0.00 0.00 33.13 3.02
6222 8393 2.978978 TCTGTTTGGAATCAGGGTCAGA 59.021 45.455 0.00 0.00 33.13 3.27
6317 8488 6.623486 CATGCCATAAGAACTGATTCAAACA 58.377 36.000 0.00 0.00 37.29 2.83
6332 8503 3.008330 GCAAATTTGGTGCATGCCATAA 58.992 40.909 19.47 4.31 41.80 1.90
6335 8506 0.397187 AGCAAATTTGGTGCATGCCA 59.603 45.000 21.43 3.51 44.74 4.92
6336 8507 1.525941 AAGCAAATTTGGTGCATGCC 58.474 45.000 22.64 6.42 44.74 4.40
6337 8508 4.392445 TGATAAAGCAAATTTGGTGCATGC 59.608 37.500 22.64 11.82 44.74 4.06
6338 8509 6.671614 ATGATAAAGCAAATTTGGTGCATG 57.328 33.333 22.64 0.00 44.74 4.06
6339 8510 8.042515 AGTAATGATAAAGCAAATTTGGTGCAT 58.957 29.630 22.64 17.58 44.74 3.96
6340 8511 7.385267 AGTAATGATAAAGCAAATTTGGTGCA 58.615 30.769 22.64 17.43 44.74 4.57
6341 8512 7.832503 AGTAATGATAAAGCAAATTTGGTGC 57.167 32.000 22.64 8.08 42.55 5.01
6505 8677 9.612620 AACAATAATTCGTTGAATTCTCTTGTC 57.387 29.630 18.05 0.00 40.77 3.18
6547 8719 2.099756 GGAAAAATGGATCCTCAAGCCG 59.900 50.000 14.23 0.00 35.62 5.52
6554 8726 4.855298 TTCTACGGGAAAAATGGATCCT 57.145 40.909 14.23 0.00 35.95 3.24
6588 8760 1.002888 CCAAGCACAGAGTGGAGATGT 59.997 52.381 0.00 0.00 34.05 3.06
6682 8854 4.495422 TGATTTCAGTAAGAGCGAAGGAC 58.505 43.478 0.00 0.00 0.00 3.85
6735 8907 3.561429 TGCTTACGGCGAGCAAAG 58.439 55.556 19.27 14.17 46.35 2.77
6782 8954 3.140814 GTTGGGGGATTCAGCGGC 61.141 66.667 0.00 0.00 0.00 6.53
6822 8994 1.274712 GGCAGATCTAGGATGGGGAG 58.725 60.000 0.00 0.00 0.00 4.30
6865 9038 1.303309 GGAAATGGTGCGAGATGGAG 58.697 55.000 0.00 0.00 0.00 3.86
6994 9167 4.631234 TCTAGCCTTATCCTCCTCCAAAA 58.369 43.478 0.00 0.00 0.00 2.44
7027 9200 2.835764 AGAATTCCCGGTAACTGCAGTA 59.164 45.455 22.01 5.84 0.00 2.74
7068 9241 1.337384 ACCAGGCATAGATCACCGCA 61.337 55.000 0.00 0.00 0.00 5.69
7106 9279 0.394565 AGAGGTGCGTCTTTGAAGCT 59.605 50.000 6.98 0.00 37.87 3.74
7294 9679 1.583495 CCTGTACTCTGGACGCGTGA 61.583 60.000 20.70 7.11 35.11 4.35
7299 9684 1.154016 CGCACCTGTACTCTGGACG 60.154 63.158 7.04 6.55 36.65 4.79
7366 9751 1.126662 CGCACTGTGTACGTACGAGTA 59.873 52.381 24.41 1.17 0.00 2.59
7367 9752 0.110509 CGCACTGTGTACGTACGAGT 60.111 55.000 24.41 19.72 0.00 4.18
7403 9789 8.556194 GTCATGCGAATACAGGAATATTAAACA 58.444 33.333 0.00 0.00 31.26 2.83
7493 9879 2.994417 GGGCATTTTGGCACCCGA 60.994 61.111 3.39 0.00 45.76 5.14
7506 9892 2.868964 AGGAGTATGACTTAGGGGCA 57.131 50.000 0.00 0.00 37.36 5.36
7675 10066 4.437930 GGCTGCAGATGAAATGTGTTAGAC 60.438 45.833 20.43 0.00 40.24 2.59
7919 10311 1.587043 CTTGGTCAGACGAGAGCGGA 61.587 60.000 0.00 0.00 43.17 5.54
7920 10312 1.153939 CTTGGTCAGACGAGAGCGG 60.154 63.158 0.00 0.00 43.17 5.52
7921 10313 1.803519 GCTTGGTCAGACGAGAGCG 60.804 63.158 6.73 0.00 44.79 5.03
7922 10314 1.446966 GGCTTGGTCAGACGAGAGC 60.447 63.158 11.16 11.16 36.59 4.09
7923 10315 0.534412 ATGGCTTGGTCAGACGAGAG 59.466 55.000 6.73 0.62 29.50 3.20
7924 10316 0.247460 CATGGCTTGGTCAGACGAGA 59.753 55.000 6.73 0.00 29.50 4.04
7925 10317 0.036952 ACATGGCTTGGTCAGACGAG 60.037 55.000 5.31 0.00 29.50 4.18
7927 10319 1.732259 GTAACATGGCTTGGTCAGACG 59.268 52.381 5.31 0.00 29.50 4.18
7928 10320 3.003480 GAGTAACATGGCTTGGTCAGAC 58.997 50.000 5.31 0.00 0.00 3.51
7930 10322 2.002586 CGAGTAACATGGCTTGGTCAG 58.997 52.381 5.31 0.00 0.00 3.51
7932 10324 2.000447 GACGAGTAACATGGCTTGGTC 59.000 52.381 5.31 1.54 0.00 4.02
7935 10327 2.668457 GTCAGACGAGTAACATGGCTTG 59.332 50.000 0.00 0.00 0.00 4.01
7936 10328 2.353803 GGTCAGACGAGTAACATGGCTT 60.354 50.000 0.00 0.00 0.00 4.35
7937 10329 1.204941 GGTCAGACGAGTAACATGGCT 59.795 52.381 0.00 0.00 0.00 4.75
7938 10330 1.641577 GGTCAGACGAGTAACATGGC 58.358 55.000 0.00 0.00 0.00 4.40
7939 10331 1.471287 TCGGTCAGACGAGTAACATGG 59.529 52.381 0.00 0.00 38.06 3.66
7940 10332 2.913777 TCGGTCAGACGAGTAACATG 57.086 50.000 0.00 0.00 38.06 3.21
7950 10360 1.204941 AGTAACATGGCTCGGTCAGAC 59.795 52.381 0.00 0.00 0.00 3.51
7979 10389 5.466393 CCATTTTTGGGTGAGTTGAATTGTC 59.534 40.000 0.00 0.00 0.00 3.18
7996 10406 9.746457 AGTTATCTCTCTAAAGAAGCCATTTTT 57.254 29.630 0.00 0.00 0.00 1.94
8068 10479 3.620488 GCTGGAATATCAGTGTTTGGGA 58.380 45.455 0.00 0.00 37.12 4.37
8074 10485 1.555075 ACACGGCTGGAATATCAGTGT 59.445 47.619 0.00 0.00 37.12 3.55
8079 10490 6.430451 CAAAATAGAACACGGCTGGAATATC 58.570 40.000 0.00 0.00 0.00 1.63
8096 10507 7.440523 ACACTTCAGGTTAGAAGCAAAATAG 57.559 36.000 3.78 0.00 46.97 1.73
8149 10560 2.417924 CCACTCTATGCACCTCTCACAC 60.418 54.545 0.00 0.00 0.00 3.82
8182 10596 5.629079 AGAATGCACAAACTAGTTAAGCC 57.371 39.130 8.92 0.00 0.00 4.35
8186 10600 8.932791 GCTTAGTAAGAATGCACAAACTAGTTA 58.067 33.333 14.27 0.00 0.00 2.24
8190 10604 6.934645 ACTGCTTAGTAAGAATGCACAAACTA 59.065 34.615 14.27 0.00 0.00 2.24
8230 10647 1.202758 ACCTTCCATGACGAACTTGCA 60.203 47.619 0.00 0.00 0.00 4.08
8358 10805 6.541934 GGACTAATCCAGTAGTAACTTGGT 57.458 41.667 0.00 0.00 45.47 3.67
8382 10832 7.224297 AGGTAATGCTTATGTTATACACCCTG 58.776 38.462 0.00 0.00 0.00 4.45
8403 10853 3.974719 TGCCAGGCAAATTCATTAGGTA 58.025 40.909 13.33 0.00 34.76 3.08
8422 10872 9.495754 GAGACAGACAGAAATAATAAAACATGC 57.504 33.333 0.00 0.00 0.00 4.06
8598 11050 2.743928 GCGACTCCACAGGCTTGG 60.744 66.667 0.00 8.80 38.10 3.61
8605 11057 0.976641 AATCTTCCTGCGACTCCACA 59.023 50.000 0.00 0.00 0.00 4.17
8725 11177 3.429543 CCGACCACGTTTCTTTAAATCGA 59.570 43.478 4.18 0.00 37.88 3.59
8738 11190 1.135344 CAAAACCAAAACCGACCACGT 60.135 47.619 0.00 0.00 37.88 4.49
8864 11318 1.940883 CTACTCCTAACACGGGCGCA 61.941 60.000 10.83 0.00 0.00 6.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.