Multiple sequence alignment - TraesCS7B01G057200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G057200 chr7B 100.000 4078 0 0 1 4078 59669410 59665333 0.000000e+00 7531.0
1 TraesCS7B01G057200 chr7B 78.584 2218 374 66 980 3140 60496979 60494806 0.000000e+00 1371.0
2 TraesCS7B01G057200 chr7B 77.526 2385 416 91 1012 3327 60092538 60090205 0.000000e+00 1325.0
3 TraesCS7B01G057200 chr7B 77.473 2406 414 90 1012 3346 59823528 59821180 0.000000e+00 1323.0
4 TraesCS7B01G057200 chr7B 78.673 1899 339 43 985 2836 60605470 60603591 0.000000e+00 1203.0
5 TraesCS7B01G057200 chr7B 76.466 1415 278 34 1698 3079 60030688 60029296 0.000000e+00 717.0
6 TraesCS7B01G057200 chr7B 82.078 770 118 16 2038 2796 60060209 60059449 1.240000e-179 640.0
7 TraesCS7B01G057200 chr7B 73.014 793 193 18 2045 2824 61118164 61117380 4.040000e-65 259.0
8 TraesCS7B01G057200 chr7A 79.250 2188 355 61 984 3116 106995205 106993062 0.000000e+00 1434.0
9 TraesCS7B01G057200 chr7A 78.363 2297 388 81 979 3210 107153532 107151280 0.000000e+00 1387.0
10 TraesCS7B01G057200 chr7A 77.782 2381 402 95 1012 3346 106745330 106743031 0.000000e+00 1349.0
11 TraesCS7B01G057200 chr7A 76.561 1890 362 63 986 2834 107603567 107601718 0.000000e+00 961.0
12 TraesCS7B01G057200 chr7A 79.465 1271 219 32 1583 2822 107322330 107321071 0.000000e+00 863.0
13 TraesCS7B01G057200 chr7A 76.320 1326 264 36 1698 2991 106294618 106293311 0.000000e+00 664.0
14 TraesCS7B01G057200 chr7A 78.899 218 37 7 2918 3132 107601598 107601387 5.500000e-29 139.0
15 TraesCS7B01G057200 chr7D 78.627 1923 344 48 984 2857 102578614 102576710 0.000000e+00 1212.0
16 TraesCS7B01G057200 chr7D 76.805 1897 354 64 986 2834 102756148 102754290 0.000000e+00 987.0
17 TraesCS7B01G057200 chr7D 81.188 101 18 1 765 865 15109532 15109433 3.380000e-11 80.5
18 TraesCS7B01G057200 chr7D 91.111 45 4 0 824 868 598307886 598307930 1.220000e-05 62.1
19 TraesCS7B01G057200 chr6B 95.782 569 14 8 3518 4078 25860698 25861264 0.000000e+00 909.0
20 TraesCS7B01G057200 chr6B 95.153 557 17 5 3525 4078 77568766 77568217 0.000000e+00 870.0
21 TraesCS7B01G057200 chr2B 95.878 558 13 5 3525 4078 72201406 72201957 0.000000e+00 894.0
22 TraesCS7B01G057200 chr1B 95.722 561 15 5 3518 4078 660062187 660062738 0.000000e+00 894.0
23 TraesCS7B01G057200 chr1B 95.365 561 16 5 3520 4076 664417523 664418077 0.000000e+00 883.0
24 TraesCS7B01G057200 chr1B 84.466 103 10 6 765 865 614497331 614497429 3.360000e-16 97.1
25 TraesCS7B01G057200 chr1B 81.373 102 15 4 765 865 658742219 658742317 3.380000e-11 80.5
26 TraesCS7B01G057200 chr5B 95.520 558 15 5 3525 4078 31649638 31649087 0.000000e+00 883.0
27 TraesCS7B01G057200 chr5B 95.000 560 17 4 3521 4078 523875200 523874650 0.000000e+00 869.0
28 TraesCS7B01G057200 chr4A 94.700 566 16 5 3521 4078 654777667 654777108 0.000000e+00 867.0
29 TraesCS7B01G057200 chr4B 94.700 566 15 7 3521 4078 23312815 23312257 0.000000e+00 865.0
30 TraesCS7B01G057200 chrUn 75.459 1361 271 41 1754 3079 91513108 91514440 4.510000e-169 604.0
31 TraesCS7B01G057200 chrUn 85.417 96 10 3 771 864 88773167 88773074 3.360000e-16 97.1
32 TraesCS7B01G057200 chrUn 89.041 73 7 1 793 865 96708065 96707994 5.610000e-14 89.8
33 TraesCS7B01G057200 chr5A 85.118 551 81 1 4 554 462546954 462546405 2.750000e-156 562.0
34 TraesCS7B01G057200 chr5A 85.687 531 76 0 4 534 462539000 462538470 9.900000e-156 560.0
35 TraesCS7B01G057200 chr5A 85.158 539 79 1 4 541 462543048 462542510 5.960000e-153 551.0
36 TraesCS7B01G057200 chr5A 83.935 554 84 4 4 554 462551095 462550544 3.610000e-145 525.0
37 TraesCS7B01G057200 chr5A 84.691 307 47 0 235 541 462554764 462554458 1.420000e-79 307.0
38 TraesCS7B01G057200 chr1D 84.921 378 49 2 4 373 43073506 43073129 3.850000e-100 375.0
39 TraesCS7B01G057200 chr2D 86.036 222 29 2 61 281 126994941 126994721 1.890000e-58 237.0
40 TraesCS7B01G057200 chr2D 86.979 192 25 0 363 554 126994369 126994178 2.470000e-52 217.0
41 TraesCS7B01G057200 chr2D 90.625 96 7 2 770 865 638351637 638351544 4.280000e-25 126.0
42 TraesCS7B01G057200 chr6A 87.379 103 10 3 767 869 609803217 609803316 9.260000e-22 115.0
43 TraesCS7B01G057200 chr6A 85.000 100 13 2 765 864 449395483 449395386 2.590000e-17 100.0
44 TraesCS7B01G057200 chr3D 90.588 85 4 4 781 864 308982088 308982169 4.310000e-20 110.0
45 TraesCS7B01G057200 chr3D 84.000 100 13 3 767 866 574477080 574477176 4.340000e-15 93.5
46 TraesCS7B01G057200 chr4D 83.000 100 16 1 765 864 7471868 7471770 5.610000e-14 89.8
47 TraesCS7B01G057200 chr4D 100.000 30 0 0 836 865 8018872 8018901 5.690000e-04 56.5
48 TraesCS7B01G057200 chr6D 81.905 105 13 4 764 866 3846228 3846328 2.610000e-12 84.2
49 TraesCS7B01G057200 chr5D 86.667 75 9 1 781 855 35488307 35488234 9.390000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G057200 chr7B 59665333 59669410 4077 True 7531 7531 100.0000 1 4078 1 chr7B.!!$R1 4077
1 TraesCS7B01G057200 chr7B 60494806 60496979 2173 True 1371 1371 78.5840 980 3140 1 chr7B.!!$R6 2160
2 TraesCS7B01G057200 chr7B 60090205 60092538 2333 True 1325 1325 77.5260 1012 3327 1 chr7B.!!$R5 2315
3 TraesCS7B01G057200 chr7B 59821180 59823528 2348 True 1323 1323 77.4730 1012 3346 1 chr7B.!!$R2 2334
4 TraesCS7B01G057200 chr7B 60603591 60605470 1879 True 1203 1203 78.6730 985 2836 1 chr7B.!!$R7 1851
5 TraesCS7B01G057200 chr7B 60029296 60030688 1392 True 717 717 76.4660 1698 3079 1 chr7B.!!$R3 1381
6 TraesCS7B01G057200 chr7B 60059449 60060209 760 True 640 640 82.0780 2038 2796 1 chr7B.!!$R4 758
7 TraesCS7B01G057200 chr7B 61117380 61118164 784 True 259 259 73.0140 2045 2824 1 chr7B.!!$R8 779
8 TraesCS7B01G057200 chr7A 106993062 106995205 2143 True 1434 1434 79.2500 984 3116 1 chr7A.!!$R3 2132
9 TraesCS7B01G057200 chr7A 107151280 107153532 2252 True 1387 1387 78.3630 979 3210 1 chr7A.!!$R4 2231
10 TraesCS7B01G057200 chr7A 106743031 106745330 2299 True 1349 1349 77.7820 1012 3346 1 chr7A.!!$R2 2334
11 TraesCS7B01G057200 chr7A 107321071 107322330 1259 True 863 863 79.4650 1583 2822 1 chr7A.!!$R5 1239
12 TraesCS7B01G057200 chr7A 106293311 106294618 1307 True 664 664 76.3200 1698 2991 1 chr7A.!!$R1 1293
13 TraesCS7B01G057200 chr7A 107601387 107603567 2180 True 550 961 77.7300 986 3132 2 chr7A.!!$R6 2146
14 TraesCS7B01G057200 chr7D 102576710 102578614 1904 True 1212 1212 78.6270 984 2857 1 chr7D.!!$R2 1873
15 TraesCS7B01G057200 chr7D 102754290 102756148 1858 True 987 987 76.8050 986 2834 1 chr7D.!!$R3 1848
16 TraesCS7B01G057200 chr6B 25860698 25861264 566 False 909 909 95.7820 3518 4078 1 chr6B.!!$F1 560
17 TraesCS7B01G057200 chr6B 77568217 77568766 549 True 870 870 95.1530 3525 4078 1 chr6B.!!$R1 553
18 TraesCS7B01G057200 chr2B 72201406 72201957 551 False 894 894 95.8780 3525 4078 1 chr2B.!!$F1 553
19 TraesCS7B01G057200 chr1B 660062187 660062738 551 False 894 894 95.7220 3518 4078 1 chr1B.!!$F3 560
20 TraesCS7B01G057200 chr1B 664417523 664418077 554 False 883 883 95.3650 3520 4076 1 chr1B.!!$F4 556
21 TraesCS7B01G057200 chr5B 31649087 31649638 551 True 883 883 95.5200 3525 4078 1 chr5B.!!$R1 553
22 TraesCS7B01G057200 chr5B 523874650 523875200 550 True 869 869 95.0000 3521 4078 1 chr5B.!!$R2 557
23 TraesCS7B01G057200 chr4A 654777108 654777667 559 True 867 867 94.7000 3521 4078 1 chr4A.!!$R1 557
24 TraesCS7B01G057200 chr4B 23312257 23312815 558 True 865 865 94.7000 3521 4078 1 chr4B.!!$R1 557
25 TraesCS7B01G057200 chrUn 91513108 91514440 1332 False 604 604 75.4590 1754 3079 1 chrUn.!!$F1 1325
26 TraesCS7B01G057200 chr5A 462538470 462554764 16294 True 501 562 84.9178 4 554 5 chr5A.!!$R1 550
27 TraesCS7B01G057200 chr2D 126994178 126994941 763 True 227 237 86.5075 61 554 2 chr2D.!!$R2 493

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
122 3791 0.032615 ACACCCTTGCTGGAAACCAA 60.033 50.0 0.00 0.0 38.35 3.67 F
393 4062 0.034670 AACTCAGATGAGGCCCAAGC 60.035 55.0 14.09 0.0 46.13 4.01 F
760 8679 0.104672 TCCCTGGAGGAGTGGTGAAA 60.105 55.0 0.00 0.0 40.93 2.69 F
1562 9542 0.106268 ACACACAAAGCACCCCATCA 60.106 50.0 0.00 0.0 0.00 3.07 F
2843 12296 0.379669 GATCGAGAAAGGTCGGCGTA 59.620 55.0 6.85 0.0 40.49 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1134 9056 0.334676 TTGGGGAAATGCCGGAGAAT 59.665 50.000 5.05 0.0 37.63 2.40 R
2234 11138 0.319555 TCAAGAAGGACCGCACGAAG 60.320 55.000 0.00 0.0 0.00 3.79 R
2714 12167 1.070134 TGTTGTACTGTGAGAGGTGCC 59.930 52.381 0.00 0.0 0.00 5.01 R
3074 12572 0.322187 GGCGCTTCCCTTAACCTCAA 60.322 55.000 7.64 0.0 0.00 3.02 R
3656 13833 1.594293 CTCGTGCCACGTGGTTTCT 60.594 57.895 33.92 0.0 43.14 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 3693 0.667993 CCACCACACACACCATCAAC 59.332 55.000 0.00 0.00 0.00 3.18
32 3701 1.250328 CACACCATCAACCAGCATGT 58.750 50.000 0.00 0.00 0.00 3.21
38 3707 1.252904 ATCAACCAGCATGTGCCACC 61.253 55.000 0.57 0.00 43.38 4.61
42 3711 2.669229 CAGCATGTGCCACCACGA 60.669 61.111 0.57 0.00 45.04 4.35
56 3725 1.280982 CCACGACCTTGTCATCATCG 58.719 55.000 0.00 0.00 38.71 3.84
97 3766 0.895530 TACACGAGGCCTGAAGGAAG 59.104 55.000 12.00 0.00 37.39 3.46
122 3791 0.032615 ACACCCTTGCTGGAAACCAA 60.033 50.000 0.00 0.00 38.35 3.67
168 3837 1.000107 GGGACCGACCTCCACTACT 60.000 63.158 0.00 0.00 38.98 2.57
218 3887 4.157120 ACATACCAGTCCCGCGGC 62.157 66.667 22.85 7.25 0.00 6.53
312 3981 4.899239 GCCGCTCCACATCCGAGG 62.899 72.222 0.00 0.00 0.00 4.63
337 4006 5.054390 GAGGACATCTCCATTCGATAGAC 57.946 47.826 0.00 0.00 42.10 2.59
339 4008 5.083122 AGGACATCTCCATTCGATAGACAT 58.917 41.667 0.00 0.00 42.10 3.06
350 4019 0.941463 GATAGACATCAGCACCGCCG 60.941 60.000 0.00 0.00 0.00 6.46
352 4021 4.451150 GACATCAGCACCGCCGGA 62.451 66.667 11.71 0.00 0.00 5.14
368 4037 3.319198 GAGGACTGAACCGGCCCA 61.319 66.667 0.00 0.00 34.73 5.36
377 4046 0.835276 GAACCGGCCCACCTATAACT 59.165 55.000 0.00 0.00 0.00 2.24
384 4053 2.972713 GGCCCACCTATAACTCAGATGA 59.027 50.000 0.00 0.00 0.00 2.92
393 4062 0.034670 AACTCAGATGAGGCCCAAGC 60.035 55.000 14.09 0.00 46.13 4.01
396 4065 4.845580 AGATGAGGCCCAAGCGCG 62.846 66.667 0.00 0.00 41.24 6.86
404 4073 2.760159 GCCCAAGCGCGCAAATCTA 61.760 57.895 35.10 0.00 0.00 1.98
418 8226 3.696518 ATCTAGGCTGGGGGCGACA 62.697 63.158 0.00 0.00 42.94 4.35
450 8258 2.928396 ACCGGCAGCCACTACCTT 60.928 61.111 13.30 0.00 0.00 3.50
454 8262 3.127533 GCAGCCACTACCTTGCCG 61.128 66.667 0.00 0.00 0.00 5.69
455 8263 2.436646 CAGCCACTACCTTGCCGG 60.437 66.667 0.00 0.00 39.35 6.13
474 8282 4.740822 AAGGGGCATCACCACCGC 62.741 66.667 0.00 0.00 46.79 5.68
541 8349 4.176752 GCCATCCGGACTCACCCC 62.177 72.222 6.12 0.00 34.64 4.95
542 8350 3.480133 CCATCCGGACTCACCCCC 61.480 72.222 6.12 0.00 34.64 5.40
543 8351 3.849951 CATCCGGACTCACCCCCG 61.850 72.222 6.12 0.00 44.94 5.73
620 8537 4.741239 GCAGGGAGGGGAGTGGGA 62.741 72.222 0.00 0.00 0.00 4.37
621 8538 2.366167 CAGGGAGGGGAGTGGGAG 60.366 72.222 0.00 0.00 0.00 4.30
624 8541 4.026357 GGAGGGGAGTGGGAGGGT 62.026 72.222 0.00 0.00 0.00 4.34
630 8547 2.203938 GAGTGGGAGGGTGTGGGA 60.204 66.667 0.00 0.00 0.00 4.37
632 8549 3.330720 GTGGGAGGGTGTGGGAGG 61.331 72.222 0.00 0.00 0.00 4.30
636 8553 4.677151 GAGGGTGTGGGAGGGGGT 62.677 72.222 0.00 0.00 0.00 4.95
638 8555 4.995058 GGGTGTGGGAGGGGGTGA 62.995 72.222 0.00 0.00 0.00 4.02
639 8556 3.330720 GGTGTGGGAGGGGGTGAG 61.331 72.222 0.00 0.00 0.00 3.51
640 8557 3.330720 GTGTGGGAGGGGGTGAGG 61.331 72.222 0.00 0.00 0.00 3.86
641 8558 4.675303 TGTGGGAGGGGGTGAGGG 62.675 72.222 0.00 0.00 0.00 4.30
642 8559 4.677151 GTGGGAGGGGGTGAGGGT 62.677 72.222 0.00 0.00 0.00 4.34
720 8637 2.982130 CGGCAGCACTAGGAACCT 59.018 61.111 0.00 0.00 0.00 3.50
727 8646 3.526534 CAGCACTAGGAACCTTAGAAGC 58.473 50.000 0.00 5.47 0.00 3.86
729 8648 2.738964 GCACTAGGAACCTTAGAAGCGG 60.739 54.545 0.00 0.00 0.00 5.52
732 8651 1.814169 GGAACCTTAGAAGCGGGCG 60.814 63.158 0.00 0.00 0.00 6.13
758 8677 3.282838 TCCCTGGAGGAGTGGTGA 58.717 61.111 0.00 0.00 40.93 4.02
759 8678 1.551875 TCCCTGGAGGAGTGGTGAA 59.448 57.895 0.00 0.00 40.93 3.18
760 8679 0.104672 TCCCTGGAGGAGTGGTGAAA 60.105 55.000 0.00 0.00 40.93 2.69
762 8681 1.545651 CCCTGGAGGAGTGGTGAAAAC 60.546 57.143 0.00 0.00 38.24 2.43
764 8683 0.107831 TGGAGGAGTGGTGAAAACCG 59.892 55.000 0.00 0.00 0.00 4.44
765 8684 0.108019 GGAGGAGTGGTGAAAACCGT 59.892 55.000 0.00 0.00 0.00 4.83
767 8686 1.602377 GAGGAGTGGTGAAAACCGTTG 59.398 52.381 0.00 0.00 0.00 4.10
768 8687 1.210967 AGGAGTGGTGAAAACCGTTGA 59.789 47.619 0.00 0.00 0.00 3.18
769 8688 1.602377 GGAGTGGTGAAAACCGTTGAG 59.398 52.381 0.00 0.00 0.00 3.02
771 8690 2.014128 AGTGGTGAAAACCGTTGAGTG 58.986 47.619 0.00 0.00 0.00 3.51
772 8691 1.741145 GTGGTGAAAACCGTTGAGTGT 59.259 47.619 0.00 0.00 0.00 3.55
773 8692 2.937799 GTGGTGAAAACCGTTGAGTGTA 59.062 45.455 0.00 0.00 0.00 2.90
774 8693 3.562557 GTGGTGAAAACCGTTGAGTGTAT 59.437 43.478 0.00 0.00 0.00 2.29
776 8695 4.751098 TGGTGAAAACCGTTGAGTGTATAC 59.249 41.667 0.00 0.00 0.00 1.47
779 8698 6.360329 GTGAAAACCGTTGAGTGTATACTTG 58.640 40.000 4.17 0.00 37.25 3.16
780 8699 6.201425 GTGAAAACCGTTGAGTGTATACTTGA 59.799 38.462 4.17 0.00 37.25 3.02
781 8700 6.932400 TGAAAACCGTTGAGTGTATACTTGAT 59.068 34.615 4.17 0.00 37.25 2.57
782 8701 6.721571 AAACCGTTGAGTGTATACTTGATG 57.278 37.500 4.17 0.00 37.25 3.07
783 8702 5.401531 ACCGTTGAGTGTATACTTGATGT 57.598 39.130 4.17 0.00 37.25 3.06
784 8703 5.408356 ACCGTTGAGTGTATACTTGATGTC 58.592 41.667 4.17 0.00 37.25 3.06
788 8707 7.411912 CCGTTGAGTGTATACTTGATGTCTTTG 60.412 40.741 4.17 0.00 37.25 2.77
789 8708 7.411912 CGTTGAGTGTATACTTGATGTCTTTGG 60.412 40.741 4.17 0.00 37.25 3.28
790 8709 7.239763 TGAGTGTATACTTGATGTCTTTGGA 57.760 36.000 4.17 0.00 37.25 3.53
791 8710 7.097192 TGAGTGTATACTTGATGTCTTTGGAC 58.903 38.462 4.17 0.00 38.93 4.02
792 8711 6.407202 AGTGTATACTTGATGTCTTTGGACC 58.593 40.000 4.17 0.00 36.29 4.46
794 8713 6.823689 GTGTATACTTGATGTCTTTGGACCAT 59.176 38.462 4.17 0.00 41.47 3.55
795 8714 7.011482 GTGTATACTTGATGTCTTTGGACCATC 59.989 40.741 4.17 0.00 41.47 3.51
796 8715 4.647564 ACTTGATGTCTTTGGACCATCT 57.352 40.909 0.00 0.00 41.47 2.90
797 8716 4.990526 ACTTGATGTCTTTGGACCATCTT 58.009 39.130 0.00 0.00 41.47 2.40
798 8717 4.763793 ACTTGATGTCTTTGGACCATCTTG 59.236 41.667 0.00 0.00 41.47 3.02
801 8720 4.520111 TGATGTCTTTGGACCATCTTGTTG 59.480 41.667 0.00 0.00 41.47 3.33
802 8721 3.221771 TGTCTTTGGACCATCTTGTTGG 58.778 45.455 0.00 0.00 41.47 3.77
811 8730 2.991250 CCATCTTGTTGGTACAGAGGG 58.009 52.381 0.00 0.00 42.39 4.30
812 8731 2.305927 CCATCTTGTTGGTACAGAGGGT 59.694 50.000 3.37 0.00 42.39 4.34
813 8732 3.244911 CCATCTTGTTGGTACAGAGGGTT 60.245 47.826 3.37 0.00 42.39 4.11
814 8733 3.485463 TCTTGTTGGTACAGAGGGTTG 57.515 47.619 0.00 0.00 42.39 3.77
815 8734 2.105821 TCTTGTTGGTACAGAGGGTTGG 59.894 50.000 0.00 0.00 42.39 3.77
816 8735 0.768622 TGTTGGTACAGAGGGTTGGG 59.231 55.000 0.00 0.00 42.39 4.12
817 8736 0.769247 GTTGGTACAGAGGGTTGGGT 59.231 55.000 0.00 0.00 42.39 4.51
818 8737 0.768622 TTGGTACAGAGGGTTGGGTG 59.231 55.000 0.00 0.00 42.39 4.61
819 8738 0.400815 TGGTACAGAGGGTTGGGTGT 60.401 55.000 0.00 0.00 0.00 4.16
820 8739 1.132785 TGGTACAGAGGGTTGGGTGTA 60.133 52.381 0.00 0.00 0.00 2.90
821 8740 1.980036 GGTACAGAGGGTTGGGTGTAA 59.020 52.381 0.00 0.00 0.00 2.41
822 8741 2.574824 GGTACAGAGGGTTGGGTGTAAT 59.425 50.000 0.00 0.00 0.00 1.89
823 8742 3.009805 GGTACAGAGGGTTGGGTGTAATT 59.990 47.826 0.00 0.00 0.00 1.40
824 8743 3.154827 ACAGAGGGTTGGGTGTAATTG 57.845 47.619 0.00 0.00 0.00 2.32
825 8744 2.714250 ACAGAGGGTTGGGTGTAATTGA 59.286 45.455 0.00 0.00 0.00 2.57
826 8745 3.333680 ACAGAGGGTTGGGTGTAATTGAT 59.666 43.478 0.00 0.00 0.00 2.57
827 8746 4.538490 ACAGAGGGTTGGGTGTAATTGATA 59.462 41.667 0.00 0.00 0.00 2.15
828 8747 5.193728 ACAGAGGGTTGGGTGTAATTGATAT 59.806 40.000 0.00 0.00 0.00 1.63
829 8748 5.765182 CAGAGGGTTGGGTGTAATTGATATC 59.235 44.000 0.00 0.00 0.00 1.63
830 8749 5.672194 AGAGGGTTGGGTGTAATTGATATCT 59.328 40.000 3.98 0.00 0.00 1.98
831 8750 6.160459 AGAGGGTTGGGTGTAATTGATATCTT 59.840 38.462 3.98 0.00 0.00 2.40
832 8751 6.365520 AGGGTTGGGTGTAATTGATATCTTC 58.634 40.000 3.98 0.00 0.00 2.87
833 8752 6.069088 AGGGTTGGGTGTAATTGATATCTTCA 60.069 38.462 3.98 0.00 0.00 3.02
834 8753 6.777580 GGGTTGGGTGTAATTGATATCTTCAT 59.222 38.462 3.98 0.00 33.34 2.57
835 8754 7.255590 GGGTTGGGTGTAATTGATATCTTCATG 60.256 40.741 3.98 0.00 33.34 3.07
836 8755 7.502226 GGTTGGGTGTAATTGATATCTTCATGA 59.498 37.037 3.98 0.00 33.34 3.07
837 8756 9.071276 GTTGGGTGTAATTGATATCTTCATGAT 57.929 33.333 3.98 0.00 39.11 2.45
879 8798 2.422276 AAAAAGTGAATGCTCCGCAC 57.578 45.000 0.00 0.00 43.04 5.34
880 8799 1.317613 AAAAGTGAATGCTCCGCACA 58.682 45.000 0.00 0.00 43.04 4.57
881 8800 0.877071 AAAGTGAATGCTCCGCACAG 59.123 50.000 0.00 0.00 43.04 3.66
882 8801 0.250467 AAGTGAATGCTCCGCACAGT 60.250 50.000 0.00 0.00 43.04 3.55
883 8802 0.671781 AGTGAATGCTCCGCACAGTC 60.672 55.000 0.00 0.00 43.04 3.51
884 8803 1.375908 TGAATGCTCCGCACAGTCC 60.376 57.895 0.00 0.00 43.04 3.85
885 8804 2.045926 AATGCTCCGCACAGTCCC 60.046 61.111 0.00 0.00 43.04 4.46
886 8805 2.527951 GAATGCTCCGCACAGTCCCT 62.528 60.000 0.00 0.00 43.04 4.20
887 8806 2.527951 AATGCTCCGCACAGTCCCTC 62.528 60.000 0.00 0.00 43.04 4.30
888 8807 3.695606 GCTCCGCACAGTCCCTCA 61.696 66.667 0.00 0.00 0.00 3.86
889 8808 2.262915 CTCCGCACAGTCCCTCAC 59.737 66.667 0.00 0.00 0.00 3.51
890 8809 2.203640 TCCGCACAGTCCCTCACT 60.204 61.111 0.00 0.00 34.67 3.41
891 8810 1.821061 CTCCGCACAGTCCCTCACTT 61.821 60.000 0.00 0.00 30.26 3.16
892 8811 1.071471 CCGCACAGTCCCTCACTTT 59.929 57.895 0.00 0.00 30.26 2.66
893 8812 1.230635 CCGCACAGTCCCTCACTTTG 61.231 60.000 0.00 0.00 36.07 2.77
894 8813 0.249868 CGCACAGTCCCTCACTTTGA 60.250 55.000 0.00 0.00 35.08 2.69
895 8814 1.609061 CGCACAGTCCCTCACTTTGAT 60.609 52.381 0.00 0.00 35.08 2.57
896 8815 1.808945 GCACAGTCCCTCACTTTGATG 59.191 52.381 0.00 0.00 35.08 3.07
897 8816 1.808945 CACAGTCCCTCACTTTGATGC 59.191 52.381 0.00 0.00 35.08 3.91
898 8817 1.421268 ACAGTCCCTCACTTTGATGCA 59.579 47.619 0.00 0.00 30.26 3.96
899 8818 2.082231 CAGTCCCTCACTTTGATGCAG 58.918 52.381 0.00 0.00 30.26 4.41
900 8819 1.980765 AGTCCCTCACTTTGATGCAGA 59.019 47.619 0.00 0.00 26.56 4.26
901 8820 2.373169 AGTCCCTCACTTTGATGCAGAA 59.627 45.455 0.00 0.00 26.56 3.02
902 8821 2.485814 GTCCCTCACTTTGATGCAGAAC 59.514 50.000 0.00 0.00 0.00 3.01
903 8822 2.373169 TCCCTCACTTTGATGCAGAACT 59.627 45.455 0.00 0.00 0.00 3.01
904 8823 3.152341 CCCTCACTTTGATGCAGAACTT 58.848 45.455 0.00 0.00 0.00 2.66
905 8824 3.190118 CCCTCACTTTGATGCAGAACTTC 59.810 47.826 0.00 0.00 0.00 3.01
906 8825 3.817084 CCTCACTTTGATGCAGAACTTCA 59.183 43.478 0.00 0.00 0.00 3.02
907 8826 4.276678 CCTCACTTTGATGCAGAACTTCAA 59.723 41.667 0.00 0.00 39.83 2.69
908 8827 5.173774 TCACTTTGATGCAGAACTTCAAC 57.826 39.130 0.00 0.00 40.89 3.18
909 8828 4.883585 TCACTTTGATGCAGAACTTCAACT 59.116 37.500 0.00 0.00 40.89 3.16
910 8829 6.054941 TCACTTTGATGCAGAACTTCAACTA 58.945 36.000 0.00 0.00 40.89 2.24
911 8830 6.542005 TCACTTTGATGCAGAACTTCAACTAA 59.458 34.615 0.00 0.00 40.89 2.24
912 8831 7.066887 TCACTTTGATGCAGAACTTCAACTAAA 59.933 33.333 0.00 0.00 40.89 1.85
913 8832 7.864379 CACTTTGATGCAGAACTTCAACTAAAT 59.136 33.333 0.00 0.00 40.89 1.40
914 8833 7.864379 ACTTTGATGCAGAACTTCAACTAAATG 59.136 33.333 0.00 0.00 40.89 2.32
915 8834 5.702865 TGATGCAGAACTTCAACTAAATGC 58.297 37.500 0.00 0.00 30.00 3.56
916 8835 5.241285 TGATGCAGAACTTCAACTAAATGCA 59.759 36.000 0.00 0.00 45.42 3.96
917 8836 5.512753 TGCAGAACTTCAACTAAATGCAA 57.487 34.783 0.00 0.00 39.29 4.08
918 8837 5.280945 TGCAGAACTTCAACTAAATGCAAC 58.719 37.500 0.00 0.00 39.29 4.17
919 8838 4.379793 GCAGAACTTCAACTAAATGCAACG 59.620 41.667 0.00 0.00 32.79 4.10
920 8839 5.510671 CAGAACTTCAACTAAATGCAACGT 58.489 37.500 0.00 0.00 0.00 3.99
921 8840 5.971202 CAGAACTTCAACTAAATGCAACGTT 59.029 36.000 0.00 0.00 0.00 3.99
922 8841 5.971202 AGAACTTCAACTAAATGCAACGTTG 59.029 36.000 23.90 23.90 38.39 4.10
923 8842 5.493133 ACTTCAACTAAATGCAACGTTGA 57.507 34.783 31.62 16.56 42.61 3.18
924 8843 5.510671 ACTTCAACTAAATGCAACGTTGAG 58.489 37.500 31.62 20.47 44.29 3.02
925 8844 5.295787 ACTTCAACTAAATGCAACGTTGAGA 59.704 36.000 31.62 16.96 44.29 3.27
926 8845 5.940192 TCAACTAAATGCAACGTTGAGAT 57.060 34.783 31.62 18.44 40.33 2.75
927 8846 7.172532 ACTTCAACTAAATGCAACGTTGAGATA 59.827 33.333 31.62 15.82 44.29 1.98
928 8847 7.609760 TCAACTAAATGCAACGTTGAGATAT 57.390 32.000 31.62 15.60 40.33 1.63
929 8848 8.710835 TCAACTAAATGCAACGTTGAGATATA 57.289 30.769 31.62 14.86 40.33 0.86
930 8849 8.817100 TCAACTAAATGCAACGTTGAGATATAG 58.183 33.333 31.62 23.50 40.33 1.31
931 8850 8.604035 CAACTAAATGCAACGTTGAGATATAGT 58.396 33.333 31.62 24.05 39.14 2.12
932 8851 8.718102 ACTAAATGCAACGTTGAGATATAGTT 57.282 30.769 31.62 15.49 0.00 2.24
933 8852 9.162764 ACTAAATGCAACGTTGAGATATAGTTT 57.837 29.630 31.62 18.18 0.00 2.66
934 8853 9.425893 CTAAATGCAACGTTGAGATATAGTTTG 57.574 33.333 31.62 11.34 0.00 2.93
935 8854 5.216566 TGCAACGTTGAGATATAGTTTGC 57.783 39.130 31.62 12.58 0.00 3.68
936 8855 4.935205 TGCAACGTTGAGATATAGTTTGCT 59.065 37.500 31.62 0.00 0.00 3.91
937 8856 5.411361 TGCAACGTTGAGATATAGTTTGCTT 59.589 36.000 31.62 0.00 0.00 3.91
938 8857 5.734498 GCAACGTTGAGATATAGTTTGCTTG 59.266 40.000 31.62 0.00 0.00 4.01
939 8858 6.402118 GCAACGTTGAGATATAGTTTGCTTGA 60.402 38.462 31.62 0.00 0.00 3.02
940 8859 6.648725 ACGTTGAGATATAGTTTGCTTGAC 57.351 37.500 0.00 0.00 0.00 3.18
941 8860 6.163476 ACGTTGAGATATAGTTTGCTTGACA 58.837 36.000 0.00 0.00 0.00 3.58
942 8861 6.649141 ACGTTGAGATATAGTTTGCTTGACAA 59.351 34.615 0.00 0.00 36.13 3.18
943 8862 7.148573 ACGTTGAGATATAGTTTGCTTGACAAG 60.149 37.037 11.02 11.02 40.06 3.16
953 8872 3.931768 CTTGACAAGCAGAGCTCCT 57.068 52.632 10.93 0.00 38.25 3.69
954 8873 1.440708 CTTGACAAGCAGAGCTCCTG 58.559 55.000 10.93 9.35 45.67 3.86
961 8880 2.125753 CAGAGCTCCTGCGGTGTC 60.126 66.667 10.93 0.00 45.42 3.67
962 8881 3.386237 AGAGCTCCTGCGGTGTCC 61.386 66.667 10.93 0.00 45.42 4.02
963 8882 3.386237 GAGCTCCTGCGGTGTCCT 61.386 66.667 0.87 0.00 45.42 3.85
964 8883 2.037367 AGCTCCTGCGGTGTCCTA 59.963 61.111 0.00 0.00 45.42 2.94
965 8884 1.605058 GAGCTCCTGCGGTGTCCTAA 61.605 60.000 0.87 0.00 45.42 2.69
966 8885 1.192146 AGCTCCTGCGGTGTCCTAAA 61.192 55.000 0.00 0.00 45.42 1.85
967 8886 0.321298 GCTCCTGCGGTGTCCTAAAA 60.321 55.000 0.00 0.00 0.00 1.52
968 8887 1.880646 GCTCCTGCGGTGTCCTAAAAA 60.881 52.381 0.00 0.00 0.00 1.94
998 8917 8.299570 AGATATATTTCGCTTGGCTAATTTTGG 58.700 33.333 0.00 0.00 0.00 3.28
1009 8928 2.735126 GCTAATTTTGGGATGCGTGTGG 60.735 50.000 0.00 0.00 0.00 4.17
1020 8939 2.353376 CGTGTGGGTTTTGCAGCG 60.353 61.111 0.00 0.00 0.00 5.18
1021 8940 2.829206 CGTGTGGGTTTTGCAGCGA 61.829 57.895 0.00 0.00 0.00 4.93
1025 8944 1.454847 TGGGTTTTGCAGCGAAGGT 60.455 52.632 0.00 0.00 41.48 3.50
1038 8957 2.003301 GCGAAGGTCCTGATCAAGAAC 58.997 52.381 0.70 0.70 0.00 3.01
1071 8990 1.044790 CCATCATTTGGGGCCCTCAC 61.045 60.000 25.93 5.48 42.33 3.51
1097 9016 0.670546 ACCAAAGCAGATCACGTCGG 60.671 55.000 0.00 0.00 0.00 4.79
1098 9017 1.421485 CAAAGCAGATCACGTCGGC 59.579 57.895 0.00 0.00 46.73 5.54
1104 9023 2.264794 GATCACGTCGGCCACCTT 59.735 61.111 2.24 0.00 0.00 3.50
1131 9053 2.825532 CCCAAATCACATTCCGGTTCTT 59.174 45.455 0.00 0.00 0.00 2.52
1134 9056 4.022416 CCAAATCACATTCCGGTTCTTTCA 60.022 41.667 0.00 0.00 0.00 2.69
1171 9099 0.108585 AACATCGTGTGCCTTCTGGT 59.891 50.000 0.00 0.00 35.27 4.00
1176 9104 0.606401 CGTGTGCCTTCTGGTTGGAT 60.606 55.000 0.00 0.00 35.27 3.41
1185 9116 2.566833 TCTGGTTGGATGACCTTGTG 57.433 50.000 0.00 0.00 40.47 3.33
1186 9117 1.774254 TCTGGTTGGATGACCTTGTGT 59.226 47.619 0.00 0.00 40.47 3.72
1270 9242 7.548075 TCCGTAATCCAAAAACTGATAGAAGAC 59.452 37.037 0.00 0.00 0.00 3.01
1272 9244 8.717821 CGTAATCCAAAAACTGATAGAAGACAA 58.282 33.333 0.00 0.00 0.00 3.18
1362 9334 1.069227 CCGCGGAAAGAAGGTTTTCAG 60.069 52.381 24.07 0.00 38.51 3.02
1363 9335 1.602377 CGCGGAAAGAAGGTTTTCAGT 59.398 47.619 0.00 0.00 38.51 3.41
1368 9340 5.005394 GCGGAAAGAAGGTTTTCAGTTTTTC 59.995 40.000 1.52 0.00 38.51 2.29
1383 9355 8.555166 TTCAGTTTTTCGTGAATGTTATTGAC 57.445 30.769 0.00 0.00 0.00 3.18
1385 9357 6.915300 CAGTTTTTCGTGAATGTTATTGACCA 59.085 34.615 0.00 0.00 0.00 4.02
1386 9358 7.433719 CAGTTTTTCGTGAATGTTATTGACCAA 59.566 33.333 0.00 0.00 0.00 3.67
1392 9364 6.799441 TCGTGAATGTTATTGACCAAATTTCG 59.201 34.615 0.00 0.00 0.00 3.46
1396 9368 7.812191 TGAATGTTATTGACCAAATTTCGAAGG 59.188 33.333 0.00 0.00 0.00 3.46
1398 9370 6.908825 TGTTATTGACCAAATTTCGAAGGAG 58.091 36.000 8.07 0.00 0.00 3.69
1472 9444 3.876274 ACATCCTATGCCGTGCTATAG 57.124 47.619 0.00 0.00 0.00 1.31
1492 9470 8.827677 GCTATAGATTTATTGTCTTCAACGGTT 58.172 33.333 3.21 0.00 36.33 4.44
1494 9472 6.165659 AGATTTATTGTCTTCAACGGTTCG 57.834 37.500 0.00 0.00 36.33 3.95
1533 9511 0.320697 ACGTGTCTTTAGGGGTGAGC 59.679 55.000 0.00 0.00 0.00 4.26
1549 9529 2.561419 GTGAGCCTTACTCCTACACACA 59.439 50.000 0.00 0.00 45.61 3.72
1550 9530 3.006537 GTGAGCCTTACTCCTACACACAA 59.993 47.826 0.00 0.00 45.61 3.33
1551 9531 3.644265 TGAGCCTTACTCCTACACACAAA 59.356 43.478 0.00 0.00 45.61 2.83
1552 9532 4.246458 GAGCCTTACTCCTACACACAAAG 58.754 47.826 0.00 0.00 39.75 2.77
1553 9533 2.742589 GCCTTACTCCTACACACAAAGC 59.257 50.000 0.00 0.00 0.00 3.51
1554 9534 3.805807 GCCTTACTCCTACACACAAAGCA 60.806 47.826 0.00 0.00 0.00 3.91
1558 9538 0.109723 TCCTACACACAAAGCACCCC 59.890 55.000 0.00 0.00 0.00 4.95
1562 9542 0.106268 ACACACAAAGCACCCCATCA 60.106 50.000 0.00 0.00 0.00 3.07
1564 9562 1.619827 CACACAAAGCACCCCATCATT 59.380 47.619 0.00 0.00 0.00 2.57
1570 9568 5.352016 CACAAAGCACCCCATCATTTTAATG 59.648 40.000 0.00 0.00 37.75 1.90
1573 9574 5.343307 AGCACCCCATCATTTTAATGTTC 57.657 39.130 2.66 0.00 37.65 3.18
1602 9608 7.894376 TTCTGTACCTAAACACCTTTAATCG 57.106 36.000 0.00 0.00 0.00 3.34
1613 9619 5.880341 ACACCTTTAATCGCTGCTAATTTC 58.120 37.500 0.00 0.00 0.00 2.17
1621 9627 1.812571 CGCTGCTAATTTCTTGGTGGT 59.187 47.619 0.00 0.00 0.00 4.16
1623 9630 3.305335 CGCTGCTAATTTCTTGGTGGTTT 60.305 43.478 0.00 0.00 0.00 3.27
1626 9633 5.863935 GCTGCTAATTTCTTGGTGGTTTAAG 59.136 40.000 0.00 0.00 0.00 1.85
1647 9654 2.715046 CAGGTGTATGATGGTGCAGTT 58.285 47.619 0.00 0.00 0.00 3.16
1650 9657 2.436417 GTGTATGATGGTGCAGTTGGT 58.564 47.619 0.00 0.00 0.00 3.67
1668 9675 1.677518 GGTGATGTGACCATAACCGCA 60.678 52.381 0.00 0.00 41.77 5.69
1713 9720 2.162208 CACAATGCCATACACACAGTCC 59.838 50.000 0.00 0.00 0.00 3.85
1745 9752 2.262471 CTTGTGCTTGCCGAGGATGC 62.262 60.000 0.00 0.00 0.00 3.91
1771 9784 5.466728 CCAGATATCCGTTGGACATTTGTAG 59.533 44.000 3.86 0.00 32.98 2.74
1780 9793 4.471904 TGGACATTTGTAGAGCCACTAG 57.528 45.455 0.00 0.00 0.00 2.57
1799 9812 1.188863 GATGGGATGCTTTGGCTTGT 58.811 50.000 0.00 0.00 39.59 3.16
1809 9822 2.037121 GCTTTGGCTTGTAACCATGGTT 59.963 45.455 31.85 31.85 36.96 3.67
1844 9857 0.447801 GGCATTGTCGTGTGGATGAC 59.552 55.000 0.00 0.00 38.45 3.06
1858 9871 2.301870 TGGATGACTGAACTACCCACAC 59.698 50.000 0.00 0.00 0.00 3.82
1869 9882 3.995636 ACTACCCACACATCAGGAGTAT 58.004 45.455 0.00 0.00 0.00 2.12
1874 9887 3.452264 CCCACACATCAGGAGTATCAAGA 59.548 47.826 0.00 0.00 36.25 3.02
1894 9907 6.483307 TCAAGAATTAAGTTGGAGACAGTGTG 59.517 38.462 0.00 0.00 44.54 3.82
1919 9932 3.941483 ACCGCCATCTACTTCATTTTCTG 59.059 43.478 0.00 0.00 0.00 3.02
1930 9943 1.266718 TCATTTTCTGCACCTTGACGC 59.733 47.619 0.00 0.00 0.00 5.19
1944 9957 2.768253 TGACGCTTTCTCATGGTCAT 57.232 45.000 0.00 0.00 33.09 3.06
1946 9959 2.234661 TGACGCTTTCTCATGGTCATCT 59.765 45.455 0.00 0.00 33.09 2.90
1953 9971 5.392811 GCTTTCTCATGGTCATCTCTTTTGG 60.393 44.000 0.00 0.00 0.00 3.28
1955 9973 5.705397 TCTCATGGTCATCTCTTTTGGAT 57.295 39.130 0.00 0.00 0.00 3.41
1963 9983 4.397417 GTCATCTCTTTTGGATTCCCACAG 59.603 45.833 0.00 0.00 43.41 3.66
1978 10009 8.160106 GGATTCCCACAGAATATTTGATACTCT 58.840 37.037 0.00 0.00 45.52 3.24
2008 10521 8.598075 GGTAATTAGATTGTTACCGTAGTTGTG 58.402 37.037 0.00 0.00 40.13 3.33
2010 10523 8.611654 AATTAGATTGTTACCGTAGTTGTGTT 57.388 30.769 0.00 0.00 0.00 3.32
2020 10533 4.281688 ACCGTAGTTGTGTTAGCTAAAGGA 59.718 41.667 7.99 0.00 31.31 3.36
2021 10534 4.863131 CCGTAGTTGTGTTAGCTAAAGGAG 59.137 45.833 7.99 0.00 29.53 3.69
2024 10537 7.086376 CGTAGTTGTGTTAGCTAAAGGAGTAA 58.914 38.462 7.99 0.00 0.00 2.24
2025 10538 7.061557 CGTAGTTGTGTTAGCTAAAGGAGTAAC 59.938 40.741 7.99 8.13 0.00 2.50
2027 10540 7.506971 AGTTGTGTTAGCTAAAGGAGTAACTT 58.493 34.615 7.99 0.00 0.00 2.66
2029 10542 7.724305 TGTGTTAGCTAAAGGAGTAACTTTG 57.276 36.000 7.99 0.00 40.64 2.77
2032 10545 8.443937 GTGTTAGCTAAAGGAGTAACTTTGATG 58.556 37.037 7.99 0.00 40.64 3.07
2033 10546 8.372459 TGTTAGCTAAAGGAGTAACTTTGATGA 58.628 33.333 7.99 0.00 40.64 2.92
2034 10547 9.384764 GTTAGCTAAAGGAGTAACTTTGATGAT 57.615 33.333 7.99 0.00 40.64 2.45
2074 10860 5.104259 AGTATTAGAAGCCCCTTGACAAG 57.896 43.478 8.31 8.31 0.00 3.16
2099 10885 3.081061 TGTTGTGGTGATATGGTGCTTC 58.919 45.455 0.00 0.00 0.00 3.86
2123 11027 5.294799 CGTAGTGCTGATTCTAGTACAGAGT 59.705 44.000 14.14 0.00 35.98 3.24
2129 11033 5.966503 GCTGATTCTAGTACAGAGTTACACG 59.033 44.000 14.14 0.00 33.83 4.49
2173 11077 1.897133 TGCAAAGAGGCTACGTCCTAA 59.103 47.619 0.00 0.00 36.38 2.69
2234 11138 8.571336 CATTTTGTAGGATACCAAGATGATTCC 58.429 37.037 0.00 0.00 42.12 3.01
2237 11141 7.067496 TGTAGGATACCAAGATGATTCCTTC 57.933 40.000 0.00 0.00 42.12 3.46
2296 11570 7.864379 TGAAAGTAAGTTAAGGAACTACACGAG 59.136 37.037 0.00 0.00 45.50 4.18
2369 11643 3.565902 TGTCAGCTATCGTCGATGAGATT 59.434 43.478 17.98 0.00 0.00 2.40
2434 11803 1.667724 CTTTAAGATGCTCGGGTGCAG 59.332 52.381 0.00 0.00 46.71 4.41
2479 11849 7.104290 GGTCTTGTAAGCTACTCAACCTAATT 58.896 38.462 0.00 0.00 0.00 1.40
2508 11945 1.000060 GCCTGATTTGTTCTTGCAGCA 60.000 47.619 0.00 0.00 0.00 4.41
2512 11949 4.470462 CTGATTTGTTCTTGCAGCACTAC 58.530 43.478 0.00 0.00 0.00 2.73
2513 11950 4.136796 TGATTTGTTCTTGCAGCACTACT 58.863 39.130 0.00 0.00 0.00 2.57
2517 11954 3.133691 TGTTCTTGCAGCACTACTCTTG 58.866 45.455 0.00 0.00 0.00 3.02
2528 11974 6.215121 CAGCACTACTCTTGATTCTGGATAG 58.785 44.000 0.00 0.00 0.00 2.08
2532 11978 7.930865 GCACTACTCTTGATTCTGGATAGAAAT 59.069 37.037 0.00 0.00 45.47 2.17
2533 11979 9.474920 CACTACTCTTGATTCTGGATAGAAATC 57.525 37.037 0.00 0.00 45.47 2.17
2586 12039 2.159282 GCATTTCGTCTAGGTTCTCCGA 60.159 50.000 0.00 0.00 39.05 4.55
2600 12053 1.476891 TCTCCGATAGTGCACAACCTC 59.523 52.381 21.04 8.60 0.00 3.85
2632 12085 1.562672 TTGAACCTAGCAGGAGGGGC 61.563 60.000 8.91 0.00 41.36 5.80
2640 12093 3.406200 CAGGAGGGGCTGAGGGTG 61.406 72.222 0.00 0.00 0.00 4.61
2641 12094 3.615811 AGGAGGGGCTGAGGGTGA 61.616 66.667 0.00 0.00 0.00 4.02
2714 12167 1.350193 CGGTCTCCAACACAGATTCG 58.650 55.000 0.00 0.00 0.00 3.34
2727 12180 0.534412 AGATTCGGCACCTCTCACAG 59.466 55.000 0.00 0.00 0.00 3.66
2733 12186 1.797025 GGCACCTCTCACAGTACAAC 58.203 55.000 0.00 0.00 0.00 3.32
2747 12200 6.046593 CACAGTACAACACTTTTCTGGTCTA 58.953 40.000 0.00 0.00 34.26 2.59
2792 12245 5.982356 TCAACTCTCATGCTGCTAATAAGT 58.018 37.500 0.00 0.00 0.00 2.24
2836 12289 0.976641 TGCACCAGATCGAGAAAGGT 59.023 50.000 0.00 0.00 0.00 3.50
2839 12292 0.818296 ACCAGATCGAGAAAGGTCGG 59.182 55.000 0.00 0.00 40.49 4.79
2843 12296 0.379669 GATCGAGAAAGGTCGGCGTA 59.620 55.000 6.85 0.00 40.49 4.42
2877 12330 1.070134 GCAATAGTGCCCACGAGGATA 59.930 52.381 3.16 0.00 45.68 2.59
2878 12331 2.755650 CAATAGTGCCCACGAGGATAC 58.244 52.381 0.00 0.00 38.24 2.24
2879 12332 1.339097 ATAGTGCCCACGAGGATACC 58.661 55.000 0.00 0.00 38.24 2.73
2881 12334 1.144057 GTGCCCACGAGGATACCAG 59.856 63.158 0.00 0.00 38.24 4.00
2882 12335 1.305802 TGCCCACGAGGATACCAGT 60.306 57.895 0.00 0.00 38.24 4.00
2888 12374 3.134081 CCCACGAGGATACCAGTTTACAT 59.866 47.826 0.00 0.00 38.24 2.29
2892 12378 6.645415 CCACGAGGATACCAGTTTACATAATC 59.355 42.308 0.00 0.00 36.89 1.75
2895 12381 5.227908 AGGATACCAGTTTACATAATCGCG 58.772 41.667 0.00 0.00 37.17 5.87
2906 12392 1.858458 CATAATCGCGTGGACGACAAT 59.142 47.619 5.77 0.00 46.28 2.71
2915 12401 2.124695 GACGACAATCCCAGCCCC 60.125 66.667 0.00 0.00 0.00 5.80
2918 12404 1.304052 CGACAATCCCAGCCCCAAA 60.304 57.895 0.00 0.00 0.00 3.28
2923 12409 0.835971 AATCCCAGCCCCAAACAACC 60.836 55.000 0.00 0.00 0.00 3.77
2929 12418 1.971695 GCCCCAAACAACCTCTCCG 60.972 63.158 0.00 0.00 0.00 4.63
2947 12436 2.623416 TCCGTGAAGATAGCGATGATGT 59.377 45.455 0.00 0.00 0.00 3.06
2968 12457 0.984230 TCCCAAGGTGTCCATGAGAC 59.016 55.000 0.00 0.39 46.51 3.36
2993 12482 1.624813 CAAAATGTTGGGGGTGCAGAT 59.375 47.619 0.00 0.00 0.00 2.90
2996 12485 2.043953 GTTGGGGGTGCAGATCCC 60.044 66.667 11.01 11.01 42.91 3.85
2999 12488 3.866582 GGGGGTGCAGATCCCGAG 61.867 72.222 12.07 0.00 45.00 4.63
3000 12489 3.083997 GGGGTGCAGATCCCGAGT 61.084 66.667 4.86 0.00 45.46 4.18
3013 12502 0.463295 CCCGAGTCATTGCAGCAGAT 60.463 55.000 0.00 0.00 0.00 2.90
3014 12503 0.935898 CCGAGTCATTGCAGCAGATC 59.064 55.000 0.00 0.00 0.00 2.75
3021 12519 1.409064 CATTGCAGCAGATCAATGGCT 59.591 47.619 0.00 0.00 43.36 4.75
3024 12522 1.100510 GCAGCAGATCAATGGCTTGA 58.899 50.000 0.00 2.63 45.15 3.02
3026 12524 2.094390 GCAGCAGATCAATGGCTTGAAA 60.094 45.455 0.00 0.00 44.29 2.69
3074 12572 6.377429 ACATTCAGATTGAGATGAGCAATGTT 59.623 34.615 0.00 0.00 36.19 2.71
3081 12579 4.401022 TGAGATGAGCAATGTTTGAGGTT 58.599 39.130 0.00 0.00 0.00 3.50
3117 12615 4.584325 AGATGCTCATGAGTACTTCTCTCC 59.416 45.833 23.38 3.85 43.13 3.71
3119 12617 3.698539 TGCTCATGAGTACTTCTCTCCTG 59.301 47.826 23.38 0.00 43.13 3.86
3132 12630 1.205655 CTCTCCTGGTTGAAGCGATGA 59.794 52.381 0.00 0.00 0.00 2.92
3140 12638 2.097954 GGTTGAAGCGATGATGCATTCA 59.902 45.455 0.00 0.52 39.12 2.57
3147 12645 3.111098 GCGATGATGCATTCAAAACCTC 58.889 45.455 0.00 0.00 38.03 3.85
3154 12652 4.742438 TGCATTCAAAACCTCGAACTAC 57.258 40.909 0.00 0.00 0.00 2.73
3158 12656 6.428465 TGCATTCAAAACCTCGAACTACATAA 59.572 34.615 0.00 0.00 0.00 1.90
3160 12658 7.481798 GCATTCAAAACCTCGAACTACATAAAG 59.518 37.037 0.00 0.00 0.00 1.85
3162 12660 7.416154 TCAAAACCTCGAACTACATAAAGTG 57.584 36.000 0.00 0.00 0.00 3.16
3166 12664 5.467705 ACCTCGAACTACATAAAGTGTGTC 58.532 41.667 0.00 0.00 42.24 3.67
3170 12668 7.148787 CCTCGAACTACATAAAGTGTGTCTTTC 60.149 40.741 0.00 0.00 44.18 2.62
3171 12669 7.431249 TCGAACTACATAAAGTGTGTCTTTCT 58.569 34.615 0.00 0.00 44.18 2.52
3172 12670 7.381408 TCGAACTACATAAAGTGTGTCTTTCTG 59.619 37.037 0.00 0.00 44.18 3.02
3210 12712 7.458409 TCTTTTGGAAAGAAGAGATTGATGG 57.542 36.000 0.88 0.00 0.00 3.51
3212 12714 7.506938 TCTTTTGGAAAGAAGAGATTGATGGTT 59.493 33.333 0.88 0.00 0.00 3.67
3215 12717 7.020827 TGGAAAGAAGAGATTGATGGTTAGT 57.979 36.000 0.00 0.00 0.00 2.24
3216 12718 6.881065 TGGAAAGAAGAGATTGATGGTTAGTG 59.119 38.462 0.00 0.00 0.00 2.74
3217 12719 7.106239 GGAAAGAAGAGATTGATGGTTAGTGA 58.894 38.462 0.00 0.00 0.00 3.41
3218 12720 7.279758 GGAAAGAAGAGATTGATGGTTAGTGAG 59.720 40.741 0.00 0.00 0.00 3.51
3219 12721 6.865834 AGAAGAGATTGATGGTTAGTGAGT 57.134 37.500 0.00 0.00 0.00 3.41
3220 12722 6.638610 AGAAGAGATTGATGGTTAGTGAGTG 58.361 40.000 0.00 0.00 0.00 3.51
3221 12723 6.438741 AGAAGAGATTGATGGTTAGTGAGTGA 59.561 38.462 0.00 0.00 0.00 3.41
3235 12737 7.657354 GGTTAGTGAGTGATGTGCATATTATCA 59.343 37.037 0.00 0.11 0.00 2.15
3236 12738 8.491152 GTTAGTGAGTGATGTGCATATTATCAC 58.509 37.037 19.66 19.66 46.83 3.06
3243 12745 8.552469 GTGATGTGCATATTATCACTTTGAAC 57.448 34.615 19.98 0.00 44.43 3.18
3244 12746 7.374228 GTGATGTGCATATTATCACTTTGAACG 59.626 37.037 19.98 0.00 44.43 3.95
3247 12749 8.432110 TGTGCATATTATCACTTTGAACGTAT 57.568 30.769 0.00 0.00 34.49 3.06
3290 12796 8.579850 TTAAGGAACCGATGTACTAGAACTTA 57.420 34.615 0.00 0.00 0.00 2.24
3294 12800 6.696148 GGAACCGATGTACTAGAACTTATGTG 59.304 42.308 0.00 0.00 0.00 3.21
3309 12815 8.462016 AGAACTTATGTGATTCCATTTGTAAGC 58.538 33.333 0.00 0.00 0.00 3.09
3315 12821 5.945191 TGTGATTCCATTTGTAAGCAGATGA 59.055 36.000 0.53 0.00 38.92 2.92
3321 12827 6.124340 TCCATTTGTAAGCAGATGATGATGT 58.876 36.000 0.53 0.00 38.92 3.06
3322 12828 7.281841 TCCATTTGTAAGCAGATGATGATGTA 58.718 34.615 0.53 0.00 38.92 2.29
3388 12894 9.965824 ATTCAAGTTGTAAAACCTTGTTATCAG 57.034 29.630 2.11 0.00 0.00 2.90
3389 12895 7.936584 TCAAGTTGTAAAACCTTGTTATCAGG 58.063 34.615 2.11 0.00 0.00 3.86
3390 12896 7.776030 TCAAGTTGTAAAACCTTGTTATCAGGA 59.224 33.333 2.11 0.00 0.00 3.86
3391 12897 8.576442 CAAGTTGTAAAACCTTGTTATCAGGAT 58.424 33.333 0.00 0.00 0.00 3.24
3392 12898 8.706322 AGTTGTAAAACCTTGTTATCAGGATT 57.294 30.769 0.00 0.00 0.00 3.01
3396 12902 8.723311 TGTAAAACCTTGTTATCAGGATTTACG 58.277 33.333 19.05 0.00 36.63 3.18
3405 12911 8.697846 TGTTATCAGGATTTACGAACTTGTAG 57.302 34.615 0.00 0.00 0.00 2.74
3407 12913 5.142061 TCAGGATTTACGAACTTGTAGCA 57.858 39.130 0.00 0.00 0.00 3.49
3408 12914 5.730550 TCAGGATTTACGAACTTGTAGCAT 58.269 37.500 0.00 0.00 0.00 3.79
3409 12915 5.810587 TCAGGATTTACGAACTTGTAGCATC 59.189 40.000 0.00 0.00 0.00 3.91
3410 12916 5.580691 CAGGATTTACGAACTTGTAGCATCA 59.419 40.000 0.00 0.00 0.00 3.07
3412 12918 6.258727 AGGATTTACGAACTTGTAGCATCATG 59.741 38.462 0.00 0.00 0.00 3.07
3416 12922 4.507710 ACGAACTTGTAGCATCATGTGAT 58.492 39.130 0.00 0.00 34.56 3.06
3418 12924 6.283694 ACGAACTTGTAGCATCATGTGATAT 58.716 36.000 0.00 0.00 30.31 1.63
3421 12927 8.929746 CGAACTTGTAGCATCATGTGATATAAT 58.070 33.333 0.00 0.00 30.95 1.28
3431 12937 7.480810 CATCATGTGATATAATGCTTCCATGG 58.519 38.462 4.97 4.97 32.63 3.66
3439 12945 1.410004 ATGCTTCCATGGCATCCTTG 58.590 50.000 6.96 0.00 45.85 3.61
3440 12946 2.641383 ATGCTTCCATGGCATCCTTGC 61.641 52.381 6.96 0.93 45.85 4.01
3455 12961 3.096092 TCCTTGCATGGTTAAATCACCC 58.904 45.455 17.54 0.00 35.73 4.61
3456 12962 3.099141 CCTTGCATGGTTAAATCACCCT 58.901 45.455 10.48 0.00 35.73 4.34
3458 12964 4.497300 CTTGCATGGTTAAATCACCCTTG 58.503 43.478 0.00 0.00 35.73 3.61
3459 12965 3.772387 TGCATGGTTAAATCACCCTTGA 58.228 40.909 0.00 0.00 35.73 3.02
3461 12967 3.763897 GCATGGTTAAATCACCCTTGAGT 59.236 43.478 0.00 0.00 35.73 3.41
3462 12968 4.380867 GCATGGTTAAATCACCCTTGAGTG 60.381 45.833 0.00 0.00 35.73 3.51
3463 12969 3.761897 TGGTTAAATCACCCTTGAGTGG 58.238 45.455 0.00 0.00 38.34 4.00
3464 12970 3.139397 TGGTTAAATCACCCTTGAGTGGT 59.861 43.478 0.00 0.00 38.34 4.16
3475 12981 3.403038 CCTTGAGTGGTGAAGTTAGTGG 58.597 50.000 0.00 0.00 0.00 4.00
3476 12982 3.071023 CCTTGAGTGGTGAAGTTAGTGGA 59.929 47.826 0.00 0.00 0.00 4.02
3477 12983 4.310769 CTTGAGTGGTGAAGTTAGTGGAG 58.689 47.826 0.00 0.00 0.00 3.86
3479 12985 4.160329 TGAGTGGTGAAGTTAGTGGAGAT 58.840 43.478 0.00 0.00 0.00 2.75
3480 12986 4.593206 TGAGTGGTGAAGTTAGTGGAGATT 59.407 41.667 0.00 0.00 0.00 2.40
3482 12988 5.941788 AGTGGTGAAGTTAGTGGAGATTTT 58.058 37.500 0.00 0.00 0.00 1.82
3483 12989 5.998363 AGTGGTGAAGTTAGTGGAGATTTTC 59.002 40.000 0.00 0.00 0.00 2.29
3485 12991 6.147985 GTGGTGAAGTTAGTGGAGATTTTCTC 59.852 42.308 0.00 0.00 42.66 2.87
3500 13006 8.255394 GAGATTTTCTCCTTCTTCTCAAAGAG 57.745 38.462 0.00 0.00 38.83 2.85
3501 13007 7.972301 AGATTTTCTCCTTCTTCTCAAAGAGA 58.028 34.615 0.00 0.00 42.36 3.10
3502 13008 7.877612 AGATTTTCTCCTTCTTCTCAAAGAGAC 59.122 37.037 0.00 0.00 42.36 3.36
3503 13009 6.739331 TTTCTCCTTCTTCTCAAAGAGACT 57.261 37.500 0.00 0.00 42.36 3.24
3504 13010 6.739331 TTCTCCTTCTTCTCAAAGAGACTT 57.261 37.500 0.00 0.00 42.36 3.01
3505 13011 6.739331 TCTCCTTCTTCTCAAAGAGACTTT 57.261 37.500 0.00 0.00 42.36 2.66
3506 13012 7.841282 TCTCCTTCTTCTCAAAGAGACTTTA 57.159 36.000 0.00 0.00 42.36 1.85
3507 13013 7.891561 TCTCCTTCTTCTCAAAGAGACTTTAG 58.108 38.462 0.00 0.00 42.36 1.85
3508 13014 7.726291 TCTCCTTCTTCTCAAAGAGACTTTAGA 59.274 37.037 0.00 0.00 42.36 2.10
3509 13015 8.251383 TCCTTCTTCTCAAAGAGACTTTAGAA 57.749 34.615 0.00 3.10 42.36 2.10
3510 13016 8.705594 TCCTTCTTCTCAAAGAGACTTTAGAAA 58.294 33.333 9.08 0.00 42.36 2.52
3511 13017 9.331282 CCTTCTTCTCAAAGAGACTTTAGAAAA 57.669 33.333 9.08 0.00 42.36 2.29
3656 13833 1.355971 GCACGAACCGATGCTAAAGA 58.644 50.000 0.00 0.00 38.84 2.52
3675 13852 1.885850 GAAACCACGTGGCACGAGT 60.886 57.895 42.65 33.51 46.05 4.18
3846 14689 9.603298 CGATACTACACATTGTACACGTTATAT 57.397 33.333 0.00 0.00 0.00 0.86
4031 18037 7.340232 ACAATTTCTCCTACATATGCATGTTGT 59.660 33.333 10.16 15.01 42.98 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 0.257328 TGGTTGATGGTGTGTGTGGT 59.743 50.000 0.00 0.00 0.00 4.16
8 9 0.953727 CTGGTTGATGGTGTGTGTGG 59.046 55.000 0.00 0.00 0.00 4.17
9 10 0.311790 GCTGGTTGATGGTGTGTGTG 59.688 55.000 0.00 0.00 0.00 3.82
10 11 0.106769 TGCTGGTTGATGGTGTGTGT 60.107 50.000 0.00 0.00 0.00 3.72
11 12 1.068125 CATGCTGGTTGATGGTGTGTG 60.068 52.381 0.00 0.00 0.00 3.82
24 3693 3.740397 CGTGGTGGCACATGCTGG 61.740 66.667 20.82 0.00 44.52 4.85
32 3701 2.050836 ATGACAAGGTCGTGGTGGCA 62.051 55.000 0.00 0.00 34.95 4.92
38 3707 1.920574 GTCGATGATGACAAGGTCGTG 59.079 52.381 0.00 0.00 38.75 4.35
56 3725 3.103911 CTTCGGTGCGACGGTGTC 61.104 66.667 0.00 0.00 34.89 3.67
65 3734 1.852895 CTCGTGTATTAGCTTCGGTGC 59.147 52.381 0.00 0.00 0.00 5.01
97 3766 1.302832 CCAGCAAGGGTGTGTCTCC 60.303 63.158 0.00 0.00 0.00 3.71
122 3791 1.979155 TCTACGGTGCTGCTGCTCT 60.979 57.895 17.00 1.23 40.48 4.09
175 3844 0.750546 TACTGCGTCTGGTCGGCTAT 60.751 55.000 0.00 0.00 0.00 2.97
193 3862 2.667470 GGGACTGGTATGTCTCTGCTA 58.333 52.381 0.00 0.00 34.76 3.49
201 3870 4.157120 GCCGCGGGACTGGTATGT 62.157 66.667 29.38 0.00 0.00 2.29
218 3887 2.370445 CCTGGCAGGACCTACAGGG 61.370 68.421 29.96 14.06 45.21 4.45
305 3974 0.856982 AGATGTCCTCCTCCTCGGAT 59.143 55.000 0.00 0.00 42.12 4.18
317 3986 4.855715 TGTCTATCGAATGGAGATGTCC 57.144 45.455 0.83 0.83 44.24 4.02
318 3987 6.018589 TGATGTCTATCGAATGGAGATGTC 57.981 41.667 0.00 0.00 36.04 3.06
329 3998 0.030773 GCGGTGCTGATGTCTATCGA 59.969 55.000 0.00 0.00 36.04 3.59
350 4019 4.097361 GGGCCGGTTCAGTCCTCC 62.097 72.222 1.90 0.00 0.00 4.30
352 4021 3.637273 GTGGGCCGGTTCAGTCCT 61.637 66.667 1.90 0.00 0.00 3.85
357 4026 0.542805 GTTATAGGTGGGCCGGTTCA 59.457 55.000 1.90 0.00 40.50 3.18
368 4037 3.243724 GGGCCTCATCTGAGTTATAGGT 58.756 50.000 0.84 0.00 40.48 3.08
377 4046 2.586245 CGCTTGGGCCTCATCTGA 59.414 61.111 4.53 0.00 34.44 3.27
393 4062 2.537560 CCCAGCCTAGATTTGCGCG 61.538 63.158 0.00 0.00 0.00 6.86
396 4065 1.829970 GCCCCCAGCCTAGATTTGC 60.830 63.158 0.00 0.00 34.35 3.68
399 4068 2.040884 TCGCCCCCAGCCTAGATT 60.041 61.111 0.00 0.00 38.78 2.40
418 8226 2.347490 GGTGTGCTGGTCCGACAT 59.653 61.111 0.00 0.00 0.00 3.06
439 8247 4.410400 GCCGGCAAGGTAGTGGCT 62.410 66.667 24.80 0.00 42.44 4.75
454 8262 3.070576 GTGGTGATGCCCCTTGCC 61.071 66.667 0.00 0.00 40.16 4.52
455 8263 3.070576 GGTGGTGATGCCCCTTGC 61.071 66.667 0.00 0.00 41.77 4.01
465 8273 4.980805 GCTTGTCCGCGGTGGTGA 62.981 66.667 27.15 1.01 39.52 4.02
605 8522 3.700350 CCTCCCACTCCCCTCCCT 61.700 72.222 0.00 0.00 0.00 4.20
608 8525 2.689034 CACCCTCCCACTCCCCTC 60.689 72.222 0.00 0.00 0.00 4.30
614 8531 2.203998 CTCCCACACCCTCCCACT 60.204 66.667 0.00 0.00 0.00 4.00
615 8532 3.330720 CCTCCCACACCCTCCCAC 61.331 72.222 0.00 0.00 0.00 4.61
616 8533 4.675303 CCCTCCCACACCCTCCCA 62.675 72.222 0.00 0.00 0.00 4.37
621 8538 4.995058 TCACCCCCTCCCACACCC 62.995 72.222 0.00 0.00 0.00 4.61
624 8541 4.675303 CCCTCACCCCCTCCCACA 62.675 72.222 0.00 0.00 0.00 4.17
701 8618 2.820037 GTTCCTAGTGCTGCCGCC 60.820 66.667 0.00 0.00 34.43 6.13
707 8624 2.166664 CGCTTCTAAGGTTCCTAGTGCT 59.833 50.000 0.00 0.00 0.00 4.40
709 8626 2.159085 CCCGCTTCTAAGGTTCCTAGTG 60.159 54.545 0.00 0.00 0.00 2.74
710 8627 2.108970 CCCGCTTCTAAGGTTCCTAGT 58.891 52.381 0.00 0.00 0.00 2.57
711 8628 1.202545 GCCCGCTTCTAAGGTTCCTAG 60.203 57.143 0.00 0.00 0.00 3.02
746 8665 0.108019 ACGGTTTTCACCACTCCTCC 59.892 55.000 0.00 0.00 44.53 4.30
751 8670 2.014128 CACTCAACGGTTTTCACCACT 58.986 47.619 0.00 0.00 44.53 4.00
754 8673 4.992951 AGTATACACTCAACGGTTTTCACC 59.007 41.667 5.50 0.00 40.16 4.02
755 8674 6.201425 TCAAGTATACACTCAACGGTTTTCAC 59.799 38.462 5.50 0.00 32.29 3.18
757 8676 6.774354 TCAAGTATACACTCAACGGTTTTC 57.226 37.500 5.50 0.00 32.29 2.29
758 8677 6.708949 ACATCAAGTATACACTCAACGGTTTT 59.291 34.615 5.50 0.00 32.29 2.43
759 8678 6.228258 ACATCAAGTATACACTCAACGGTTT 58.772 36.000 5.50 0.00 32.29 3.27
760 8679 5.790593 ACATCAAGTATACACTCAACGGTT 58.209 37.500 5.50 0.00 32.29 4.44
762 8681 5.651530 AGACATCAAGTATACACTCAACGG 58.348 41.667 5.50 0.00 32.29 4.44
764 8683 7.602644 TCCAAAGACATCAAGTATACACTCAAC 59.397 37.037 5.50 0.00 32.29 3.18
765 8684 7.602644 GTCCAAAGACATCAAGTATACACTCAA 59.397 37.037 5.50 0.00 42.99 3.02
767 8686 6.535508 GGTCCAAAGACATCAAGTATACACTC 59.464 42.308 5.50 0.00 45.48 3.51
768 8687 6.013725 TGGTCCAAAGACATCAAGTATACACT 60.014 38.462 5.50 0.00 45.48 3.55
769 8688 6.170506 TGGTCCAAAGACATCAAGTATACAC 58.829 40.000 5.50 0.00 45.48 2.90
771 8690 7.275920 AGATGGTCCAAAGACATCAAGTATAC 58.724 38.462 0.00 0.00 45.48 1.47
772 8691 7.437713 AGATGGTCCAAAGACATCAAGTATA 57.562 36.000 0.00 0.00 45.48 1.47
773 8692 6.319048 AGATGGTCCAAAGACATCAAGTAT 57.681 37.500 0.00 0.00 45.48 2.12
774 8693 5.762179 AGATGGTCCAAAGACATCAAGTA 57.238 39.130 0.00 0.00 45.48 2.24
776 8695 4.763793 ACAAGATGGTCCAAAGACATCAAG 59.236 41.667 0.00 0.00 45.48 3.02
779 8698 4.082571 CCAACAAGATGGTCCAAAGACATC 60.083 45.833 0.00 0.00 45.48 3.06
780 8699 3.828451 CCAACAAGATGGTCCAAAGACAT 59.172 43.478 0.00 0.00 45.48 3.06
781 8700 3.221771 CCAACAAGATGGTCCAAAGACA 58.778 45.455 0.00 0.00 45.48 3.41
782 8701 3.923017 CCAACAAGATGGTCCAAAGAC 57.077 47.619 0.00 0.00 42.73 3.01
791 8710 2.305927 ACCCTCTGTACCAACAAGATGG 59.694 50.000 0.00 0.00 46.38 3.51
792 8711 3.703001 ACCCTCTGTACCAACAAGATG 57.297 47.619 0.00 0.00 34.49 2.90
794 8713 2.105821 CCAACCCTCTGTACCAACAAGA 59.894 50.000 0.00 0.00 34.49 3.02
795 8714 2.504367 CCAACCCTCTGTACCAACAAG 58.496 52.381 0.00 0.00 34.49 3.16
796 8715 1.144093 CCCAACCCTCTGTACCAACAA 59.856 52.381 0.00 0.00 34.49 2.83
797 8716 0.768622 CCCAACCCTCTGTACCAACA 59.231 55.000 0.00 0.00 0.00 3.33
798 8717 0.769247 ACCCAACCCTCTGTACCAAC 59.231 55.000 0.00 0.00 0.00 3.77
801 8720 1.648116 TACACCCAACCCTCTGTACC 58.352 55.000 0.00 0.00 0.00 3.34
802 8721 3.994931 ATTACACCCAACCCTCTGTAC 57.005 47.619 0.00 0.00 0.00 2.90
804 8723 2.714250 TCAATTACACCCAACCCTCTGT 59.286 45.455 0.00 0.00 0.00 3.41
805 8724 3.433306 TCAATTACACCCAACCCTCTG 57.567 47.619 0.00 0.00 0.00 3.35
806 8725 5.672194 AGATATCAATTACACCCAACCCTCT 59.328 40.000 5.32 0.00 0.00 3.69
807 8726 5.941788 AGATATCAATTACACCCAACCCTC 58.058 41.667 5.32 0.00 0.00 4.30
809 8728 6.126409 TGAAGATATCAATTACACCCAACCC 58.874 40.000 5.32 0.00 34.30 4.11
810 8729 7.502226 TCATGAAGATATCAATTACACCCAACC 59.498 37.037 5.32 0.00 42.54 3.77
811 8730 8.450578 TCATGAAGATATCAATTACACCCAAC 57.549 34.615 5.32 0.00 42.54 3.77
872 8791 1.821061 AAGTGAGGGACTGTGCGGAG 61.821 60.000 0.00 0.00 41.55 4.63
873 8792 1.407656 AAAGTGAGGGACTGTGCGGA 61.408 55.000 0.00 0.00 41.55 5.54
874 8793 1.071471 AAAGTGAGGGACTGTGCGG 59.929 57.895 0.00 0.00 41.55 5.69
875 8794 0.249868 TCAAAGTGAGGGACTGTGCG 60.250 55.000 0.00 0.00 41.55 5.34
876 8795 1.808945 CATCAAAGTGAGGGACTGTGC 59.191 52.381 0.00 0.00 41.55 4.57
877 8796 1.808945 GCATCAAAGTGAGGGACTGTG 59.191 52.381 0.00 0.00 41.55 3.66
878 8797 1.421268 TGCATCAAAGTGAGGGACTGT 59.579 47.619 0.00 0.00 41.55 3.55
879 8798 2.082231 CTGCATCAAAGTGAGGGACTG 58.918 52.381 0.00 0.00 41.55 3.51
881 8800 2.479566 TCTGCATCAAAGTGAGGGAC 57.520 50.000 0.00 0.00 0.00 4.46
882 8801 2.373169 AGTTCTGCATCAAAGTGAGGGA 59.627 45.455 0.00 0.00 0.00 4.20
883 8802 2.787994 AGTTCTGCATCAAAGTGAGGG 58.212 47.619 0.00 0.00 0.00 4.30
884 8803 3.817084 TGAAGTTCTGCATCAAAGTGAGG 59.183 43.478 4.17 0.00 0.00 3.86
885 8804 5.008415 AGTTGAAGTTCTGCATCAAAGTGAG 59.992 40.000 4.17 0.00 36.69 3.51
886 8805 4.883585 AGTTGAAGTTCTGCATCAAAGTGA 59.116 37.500 4.17 0.00 36.69 3.41
887 8806 5.179045 AGTTGAAGTTCTGCATCAAAGTG 57.821 39.130 4.17 0.00 36.69 3.16
888 8807 6.942532 TTAGTTGAAGTTCTGCATCAAAGT 57.057 33.333 4.17 0.00 36.69 2.66
889 8808 7.148853 GCATTTAGTTGAAGTTCTGCATCAAAG 60.149 37.037 4.17 0.00 36.69 2.77
890 8809 6.642131 GCATTTAGTTGAAGTTCTGCATCAAA 59.358 34.615 4.17 0.00 36.69 2.69
891 8810 6.151691 GCATTTAGTTGAAGTTCTGCATCAA 58.848 36.000 4.17 0.00 33.07 2.57
892 8811 5.241285 TGCATTTAGTTGAAGTTCTGCATCA 59.759 36.000 9.01 0.00 33.80 3.07
893 8812 5.702865 TGCATTTAGTTGAAGTTCTGCATC 58.297 37.500 9.01 0.00 33.80 3.91
894 8813 5.710513 TGCATTTAGTTGAAGTTCTGCAT 57.289 34.783 9.01 0.00 33.80 3.96
895 8814 5.280945 GTTGCATTTAGTTGAAGTTCTGCA 58.719 37.500 9.01 9.01 36.67 4.41
896 8815 4.379793 CGTTGCATTTAGTTGAAGTTCTGC 59.620 41.667 4.17 4.37 0.00 4.26
897 8816 5.510671 ACGTTGCATTTAGTTGAAGTTCTG 58.489 37.500 4.17 0.00 0.00 3.02
898 8817 5.751243 ACGTTGCATTTAGTTGAAGTTCT 57.249 34.783 4.17 0.00 0.00 3.01
899 8818 5.968848 TCAACGTTGCATTTAGTTGAAGTTC 59.031 36.000 23.47 0.00 46.49 3.01
900 8819 5.885881 TCAACGTTGCATTTAGTTGAAGTT 58.114 33.333 23.47 1.53 46.49 2.66
901 8820 5.493133 TCAACGTTGCATTTAGTTGAAGT 57.507 34.783 23.47 0.00 46.49 3.01
905 8824 8.604035 ACTATATCTCAACGTTGCATTTAGTTG 58.396 33.333 23.47 14.10 43.61 3.16
906 8825 8.718102 ACTATATCTCAACGTTGCATTTAGTT 57.282 30.769 23.47 12.05 0.00 2.24
907 8826 8.718102 AACTATATCTCAACGTTGCATTTAGT 57.282 30.769 23.47 23.00 0.00 2.24
908 8827 9.425893 CAAACTATATCTCAACGTTGCATTTAG 57.574 33.333 23.47 22.49 0.00 1.85
909 8828 7.908082 GCAAACTATATCTCAACGTTGCATTTA 59.092 33.333 23.47 14.30 0.00 1.40
910 8829 6.747280 GCAAACTATATCTCAACGTTGCATTT 59.253 34.615 23.47 13.97 0.00 2.32
911 8830 6.094048 AGCAAACTATATCTCAACGTTGCATT 59.906 34.615 23.47 11.91 0.00 3.56
912 8831 5.586243 AGCAAACTATATCTCAACGTTGCAT 59.414 36.000 23.47 18.29 0.00 3.96
913 8832 4.935205 AGCAAACTATATCTCAACGTTGCA 59.065 37.500 23.47 12.49 0.00 4.08
914 8833 5.470845 AGCAAACTATATCTCAACGTTGC 57.529 39.130 23.47 7.66 0.00 4.17
915 8834 6.955963 GTCAAGCAAACTATATCTCAACGTTG 59.044 38.462 22.35 22.35 0.00 4.10
916 8835 6.649141 TGTCAAGCAAACTATATCTCAACGTT 59.351 34.615 0.00 0.00 0.00 3.99
917 8836 6.163476 TGTCAAGCAAACTATATCTCAACGT 58.837 36.000 0.00 0.00 0.00 3.99
918 8837 6.647212 TGTCAAGCAAACTATATCTCAACG 57.353 37.500 0.00 0.00 0.00 4.10
935 8854 1.440708 CAGGAGCTCTGCTTGTCAAG 58.559 55.000 14.64 8.31 39.88 3.02
936 8855 3.620061 CAGGAGCTCTGCTTGTCAA 57.380 52.632 14.64 0.00 39.88 3.18
966 8885 7.573968 AGCCAAGCGAAATATATCTCTTTTT 57.426 32.000 0.00 0.00 0.00 1.94
967 8886 8.677148 TTAGCCAAGCGAAATATATCTCTTTT 57.323 30.769 0.00 0.00 0.00 2.27
968 8887 8.854614 ATTAGCCAAGCGAAATATATCTCTTT 57.145 30.769 0.00 0.00 0.00 2.52
969 8888 8.854614 AATTAGCCAAGCGAAATATATCTCTT 57.145 30.769 0.00 0.00 0.00 2.85
970 8889 8.854614 AAATTAGCCAAGCGAAATATATCTCT 57.145 30.769 0.00 0.00 0.00 3.10
971 8890 9.334693 CAAAATTAGCCAAGCGAAATATATCTC 57.665 33.333 0.00 0.00 0.00 2.75
972 8891 8.299570 CCAAAATTAGCCAAGCGAAATATATCT 58.700 33.333 0.00 0.00 0.00 1.98
973 8892 7.542130 CCCAAAATTAGCCAAGCGAAATATATC 59.458 37.037 0.00 0.00 0.00 1.63
974 8893 7.232534 TCCCAAAATTAGCCAAGCGAAATATAT 59.767 33.333 0.00 0.00 0.00 0.86
975 8894 6.547880 TCCCAAAATTAGCCAAGCGAAATATA 59.452 34.615 0.00 0.00 0.00 0.86
976 8895 5.362430 TCCCAAAATTAGCCAAGCGAAATAT 59.638 36.000 0.00 0.00 0.00 1.28
977 8896 4.707448 TCCCAAAATTAGCCAAGCGAAATA 59.293 37.500 0.00 0.00 0.00 1.40
978 8897 3.513515 TCCCAAAATTAGCCAAGCGAAAT 59.486 39.130 0.00 0.00 0.00 2.17
979 8898 2.894126 TCCCAAAATTAGCCAAGCGAAA 59.106 40.909 0.00 0.00 0.00 3.46
980 8899 2.520069 TCCCAAAATTAGCCAAGCGAA 58.480 42.857 0.00 0.00 0.00 4.70
981 8900 2.208132 TCCCAAAATTAGCCAAGCGA 57.792 45.000 0.00 0.00 0.00 4.93
982 8901 2.813061 CATCCCAAAATTAGCCAAGCG 58.187 47.619 0.00 0.00 0.00 4.68
998 8917 1.372872 GCAAAACCCACACGCATCC 60.373 57.895 0.00 0.00 0.00 3.51
1009 8928 1.172812 AGGACCTTCGCTGCAAAACC 61.173 55.000 0.00 0.00 0.00 3.27
1020 8939 3.516615 CGAGTTCTTGATCAGGACCTTC 58.483 50.000 7.09 4.93 29.58 3.46
1021 8940 2.354203 GCGAGTTCTTGATCAGGACCTT 60.354 50.000 7.09 0.00 29.58 3.50
1025 8944 2.300152 ACTTGCGAGTTCTTGATCAGGA 59.700 45.455 2.91 2.91 29.87 3.86
1071 8990 3.668757 CGTGATCTGCTTTGGTCATTGTG 60.669 47.826 0.00 0.00 0.00 3.33
1104 9023 1.603236 GAATGTGATTTGGGCGGCCA 61.603 55.000 29.27 29.27 0.00 5.36
1112 9031 5.119931 TGAAAGAACCGGAATGTGATTTG 57.880 39.130 9.46 0.00 0.00 2.32
1113 9032 5.982890 ATGAAAGAACCGGAATGTGATTT 57.017 34.783 9.46 0.00 0.00 2.17
1131 9053 1.684869 GGGGAAATGCCGGAGAATGAA 60.685 52.381 5.05 0.00 37.63 2.57
1134 9056 0.334676 TTGGGGAAATGCCGGAGAAT 59.665 50.000 5.05 0.00 37.63 2.40
1235 9207 3.328382 TTGGATTACGGAAGGTCACAG 57.672 47.619 0.00 0.00 0.00 3.66
1237 9209 4.517832 AGTTTTTGGATTACGGAAGGTCAC 59.482 41.667 0.00 0.00 0.00 3.67
1245 9217 7.333423 TGTCTTCTATCAGTTTTTGGATTACGG 59.667 37.037 0.00 0.00 0.00 4.02
1308 9280 2.440539 ACACCGTCTTACTTCTGCAG 57.559 50.000 7.63 7.63 0.00 4.41
1362 9334 7.687005 TTGGTCAATAACATTCACGAAAAAC 57.313 32.000 0.00 0.00 0.00 2.43
1363 9335 8.879342 ATTTGGTCAATAACATTCACGAAAAA 57.121 26.923 0.00 0.00 0.00 1.94
1368 9340 6.799441 TCGAAATTTGGTCAATAACATTCACG 59.201 34.615 0.00 0.00 0.00 4.35
1383 9355 4.367450 TGTTTTGCTCCTTCGAAATTTGG 58.633 39.130 0.00 0.00 0.00 3.28
1385 9357 5.691754 GTGATGTTTTGCTCCTTCGAAATTT 59.308 36.000 0.00 0.00 0.00 1.82
1386 9358 5.222631 GTGATGTTTTGCTCCTTCGAAATT 58.777 37.500 0.00 0.00 0.00 1.82
1392 9364 1.200020 CCGGTGATGTTTTGCTCCTTC 59.800 52.381 0.00 0.00 0.00 3.46
1396 9368 3.006940 TGTATCCGGTGATGTTTTGCTC 58.993 45.455 0.00 0.00 32.18 4.26
1398 9370 2.477863 GCTGTATCCGGTGATGTTTTGC 60.478 50.000 0.00 0.00 32.18 3.68
1461 9433 6.423905 TGAAGACAATAAATCTATAGCACGGC 59.576 38.462 0.00 0.00 0.00 5.68
1472 9444 5.923665 ACGAACCGTTGAAGACAATAAATC 58.076 37.500 0.00 0.00 36.35 2.17
1492 9470 3.751518 TGCCTACTAGCTCATCATACGA 58.248 45.455 0.00 0.00 0.00 3.43
1494 9472 4.230657 CGTTGCCTACTAGCTCATCATAC 58.769 47.826 0.00 0.00 0.00 2.39
1533 9511 3.746492 GTGCTTTGTGTGTAGGAGTAAGG 59.254 47.826 0.00 0.00 0.00 2.69
1549 9529 5.760484 ACATTAAAATGATGGGGTGCTTT 57.240 34.783 9.60 0.00 39.67 3.51
1550 9530 5.484998 AGAACATTAAAATGATGGGGTGCTT 59.515 36.000 9.60 0.00 39.67 3.91
1551 9531 5.025453 AGAACATTAAAATGATGGGGTGCT 58.975 37.500 9.60 0.00 39.67 4.40
1552 9532 5.343307 AGAACATTAAAATGATGGGGTGC 57.657 39.130 9.60 0.00 39.67 5.01
1553 9533 9.889128 AAATTAGAACATTAAAATGATGGGGTG 57.111 29.630 9.60 0.00 39.67 4.61
1570 9568 8.843885 AGGTGTTTAGGTACAGAAATTAGAAC 57.156 34.615 0.00 0.00 0.00 3.01
1591 9593 6.124088 AGAAATTAGCAGCGATTAAAGGTG 57.876 37.500 8.55 8.55 39.81 4.00
1602 9608 3.942130 AACCACCAAGAAATTAGCAGC 57.058 42.857 0.00 0.00 0.00 5.25
1613 9619 2.306847 ACACCTGCTTAAACCACCAAG 58.693 47.619 0.00 0.00 0.00 3.61
1621 9627 3.694072 GCACCATCATACACCTGCTTAAA 59.306 43.478 0.00 0.00 0.00 1.52
1623 9630 2.238395 TGCACCATCATACACCTGCTTA 59.762 45.455 0.00 0.00 0.00 3.09
1626 9633 1.019673 CTGCACCATCATACACCTGC 58.980 55.000 0.00 0.00 0.00 4.85
1647 9654 1.677518 GCGGTTATGGTCACATCACCA 60.678 52.381 10.59 0.00 46.93 4.17
1650 9657 1.552792 TCTGCGGTTATGGTCACATCA 59.447 47.619 0.00 0.00 38.53 3.07
1668 9675 6.039047 TGAAGTCTGTGTTAGTAACTCGTTCT 59.961 38.462 14.00 7.10 0.00 3.01
1682 9689 2.346766 TGGCATTGTGAAGTCTGTGT 57.653 45.000 0.00 0.00 0.00 3.72
1713 9720 1.575922 CACAAGCATGGACACACCG 59.424 57.895 0.00 0.00 42.61 4.94
1722 9729 1.154093 CTCGGCAAGCACAAGCATG 60.154 57.895 0.00 0.00 45.49 4.06
1745 9752 2.979814 TGTCCAACGGATATCTGGTG 57.020 50.000 20.92 20.92 39.61 4.17
1780 9793 1.188863 ACAAGCCAAAGCATCCCATC 58.811 50.000 0.00 0.00 43.56 3.51
1787 9800 1.617850 CCATGGTTACAAGCCAAAGCA 59.382 47.619 2.57 0.00 43.56 3.91
1818 9831 3.133901 TCCACACGACAATGCCAGTATAT 59.866 43.478 0.00 0.00 0.00 0.86
1844 9857 2.567169 TCCTGATGTGTGGGTAGTTCAG 59.433 50.000 0.00 0.00 0.00 3.02
1858 9871 8.834465 CCAACTTAATTCTTGATACTCCTGATG 58.166 37.037 0.00 0.00 0.00 3.07
1869 9882 6.483307 CACACTGTCTCCAACTTAATTCTTGA 59.517 38.462 0.00 0.00 0.00 3.02
1874 9887 3.821033 GCCACACTGTCTCCAACTTAATT 59.179 43.478 0.00 0.00 0.00 1.40
1903 9916 6.150140 GTCAAGGTGCAGAAAATGAAGTAGAT 59.850 38.462 0.00 0.00 0.00 1.98
1919 9932 1.135859 CATGAGAAAGCGTCAAGGTGC 60.136 52.381 0.00 0.00 0.00 5.01
1930 9943 5.942236 TCCAAAAGAGATGACCATGAGAAAG 59.058 40.000 0.00 0.00 0.00 2.62
1944 9957 4.722526 TTCTGTGGGAATCCAAAAGAGA 57.277 40.909 0.09 0.00 46.04 3.10
1946 9959 7.673504 TCAAATATTCTGTGGGAATCCAAAAGA 59.326 33.333 0.09 0.00 46.04 2.52
1982 10014 8.598075 CACAACTACGGTAACAATCTAATTACC 58.402 37.037 3.53 3.53 44.68 2.85
1983 10015 9.143631 ACACAACTACGGTAACAATCTAATTAC 57.856 33.333 0.00 0.00 0.00 1.89
2000 10035 8.087136 AGTTACTCCTTTAGCTAACACAACTAC 58.913 37.037 5.45 0.96 30.46 2.73
2008 10521 8.773404 TCATCAAAGTTACTCCTTTAGCTAAC 57.227 34.615 5.45 0.00 33.00 2.34
2020 10533 8.437360 TGCGAATGATTATCATCAAAGTTACT 57.563 30.769 8.26 0.00 42.93 2.24
2021 10534 8.338259 ACTGCGAATGATTATCATCAAAGTTAC 58.662 33.333 8.26 0.00 42.93 2.50
2024 10537 6.932356 ACTGCGAATGATTATCATCAAAGT 57.068 33.333 8.26 7.38 42.93 2.66
2025 10538 7.412063 TGAACTGCGAATGATTATCATCAAAG 58.588 34.615 8.26 6.83 42.93 2.77
2027 10540 6.923928 TGAACTGCGAATGATTATCATCAA 57.076 33.333 8.26 0.00 42.93 2.57
2029 10542 7.412853 ACTTTGAACTGCGAATGATTATCATC 58.587 34.615 8.26 2.03 35.76 2.92
2034 10547 9.594478 TCTAATACTTTGAACTGCGAATGATTA 57.406 29.630 0.00 0.00 0.00 1.75
2035 10548 8.492673 TCTAATACTTTGAACTGCGAATGATT 57.507 30.769 0.00 0.00 0.00 2.57
2036 10549 8.492673 TTCTAATACTTTGAACTGCGAATGAT 57.507 30.769 0.00 0.00 0.00 2.45
2041 10554 4.630069 GGCTTCTAATACTTTGAACTGCGA 59.370 41.667 0.00 0.00 0.00 5.10
2074 10860 4.158394 AGCACCATATCACCACAACAATTC 59.842 41.667 0.00 0.00 0.00 2.17
2099 10885 5.294799 ACTCTGTACTAGAATCAGCACTACG 59.705 44.000 0.00 0.00 34.32 3.51
2123 11027 3.202906 GGATGATAAGCTTGCCGTGTAA 58.797 45.455 9.86 0.00 0.00 2.41
2129 11033 4.023365 GTCAGAATGGATGATAAGCTTGCC 60.023 45.833 9.86 0.77 36.16 4.52
2173 11077 1.566211 CTGGTCCAGATCTGTCACCT 58.434 55.000 28.66 0.00 34.44 4.00
2234 11138 0.319555 TCAAGAAGGACCGCACGAAG 60.320 55.000 0.00 0.00 0.00 3.79
2237 11141 2.004583 TTATCAAGAAGGACCGCACG 57.995 50.000 0.00 0.00 0.00 5.34
2296 11570 6.388435 AAGCATCAGCATATTCTTCTTTCC 57.612 37.500 0.00 0.00 45.49 3.13
2369 11643 7.678598 TCAGAGAGGAAAGAAGTTAAATAGGGA 59.321 37.037 0.00 0.00 0.00 4.20
2434 11803 3.118371 ACCAAATCCCGGAGTCTTGTATC 60.118 47.826 0.73 0.00 0.00 2.24
2479 11849 3.330701 AGAACAAATCAGGCTACCAAGGA 59.669 43.478 0.00 0.00 0.00 3.36
2508 11945 9.432982 AGATTTCTATCCAGAATCAAGAGTAGT 57.567 33.333 0.00 0.00 40.47 2.73
2517 11954 8.900983 AGCAACTAAGATTTCTATCCAGAATC 57.099 34.615 0.00 0.00 40.47 2.52
2586 12039 3.668447 CAGTTGAGAGGTTGTGCACTAT 58.332 45.455 19.41 0.55 0.00 2.12
2600 12053 2.787994 AGGTTCAAGATGGCAGTTGAG 58.212 47.619 13.08 0.00 34.25 3.02
2651 12104 3.462982 AGTTTTGCCGAACCATTTTTCC 58.537 40.909 0.00 0.00 0.00 3.13
2714 12167 1.070134 TGTTGTACTGTGAGAGGTGCC 59.930 52.381 0.00 0.00 0.00 5.01
2733 12186 8.331022 CGTGATGATAAATAGACCAGAAAAGTG 58.669 37.037 0.00 0.00 0.00 3.16
2747 12200 6.306199 TGAAATGGATCCCGTGATGATAAAT 58.694 36.000 9.90 0.00 0.00 1.40
2792 12245 4.667573 TGGCATAAACCAACCTCACAATA 58.332 39.130 0.00 0.00 36.55 1.90
2825 12278 0.381089 CTACGCCGACCTTTCTCGAT 59.619 55.000 0.00 0.00 35.58 3.59
2836 12289 1.154093 CTGACGCTTTCTACGCCGA 60.154 57.895 0.00 0.00 0.00 5.54
2839 12292 1.704582 CAGCTGACGCTTTCTACGC 59.295 57.895 8.42 0.00 46.47 4.42
2843 12296 2.005451 CTATTGCAGCTGACGCTTTCT 58.995 47.619 20.43 0.00 46.47 2.52
2868 12321 6.362551 CGATTATGTAAACTGGTATCCTCGTG 59.637 42.308 0.00 0.00 0.00 4.35
2873 12326 4.986659 ACGCGATTATGTAAACTGGTATCC 59.013 41.667 15.93 0.00 0.00 2.59
2877 12330 2.933906 CCACGCGATTATGTAAACTGGT 59.066 45.455 15.93 0.00 0.00 4.00
2878 12331 3.000925 GTCCACGCGATTATGTAAACTGG 59.999 47.826 15.93 5.20 0.00 4.00
2879 12332 3.301579 CGTCCACGCGATTATGTAAACTG 60.302 47.826 15.93 0.00 0.00 3.16
2881 12334 2.853594 TCGTCCACGCGATTATGTAAAC 59.146 45.455 15.93 0.00 39.60 2.01
2882 12335 2.853594 GTCGTCCACGCGATTATGTAAA 59.146 45.455 15.93 0.00 43.07 2.01
2888 12374 1.552226 GATTGTCGTCCACGCGATTA 58.448 50.000 15.93 0.00 43.07 1.75
2892 12378 3.186047 GGGATTGTCGTCCACGCG 61.186 66.667 3.53 3.53 40.17 6.01
2895 12381 1.745489 GGCTGGGATTGTCGTCCAC 60.745 63.158 0.00 0.00 40.17 4.02
2906 12392 2.200092 GGTTGTTTGGGGCTGGGA 59.800 61.111 0.00 0.00 0.00 4.37
2915 12401 2.833794 TCTTCACGGAGAGGTTGTTTG 58.166 47.619 0.00 0.00 0.00 2.93
2918 12404 2.166664 GCTATCTTCACGGAGAGGTTGT 59.833 50.000 0.00 0.00 0.00 3.32
2923 12409 2.550180 TCATCGCTATCTTCACGGAGAG 59.450 50.000 0.00 0.00 0.00 3.20
2929 12418 4.212214 GGGAAACATCATCGCTATCTTCAC 59.788 45.833 0.00 0.00 0.00 3.18
2947 12436 2.061848 TCTCATGGACACCTTGGGAAA 58.938 47.619 4.18 0.00 35.62 3.13
2993 12482 1.078918 CTGCTGCAATGACTCGGGA 60.079 57.895 3.02 0.00 0.00 5.14
2996 12485 1.648504 TGATCTGCTGCAATGACTCG 58.351 50.000 3.02 0.00 0.00 4.18
3013 12502 0.968405 GCCACCTTTCAAGCCATTGA 59.032 50.000 0.00 0.00 43.72 2.57
3014 12503 0.971386 AGCCACCTTTCAAGCCATTG 59.029 50.000 0.00 0.00 37.80 2.82
3021 12519 2.719376 GCACAGAGCCACCTTTCAA 58.281 52.632 0.00 0.00 37.23 2.69
3074 12572 0.322187 GGCGCTTCCCTTAACCTCAA 60.322 55.000 7.64 0.00 0.00 3.02
3081 12579 1.153168 GCATCTGGCGCTTCCCTTA 60.153 57.895 7.64 0.00 0.00 2.69
3117 12615 1.089112 TGCATCATCGCTTCAACCAG 58.911 50.000 0.00 0.00 0.00 4.00
3119 12617 2.097954 TGAATGCATCATCGCTTCAACC 59.902 45.455 0.00 0.00 31.50 3.77
3132 12630 4.759693 TGTAGTTCGAGGTTTTGAATGCAT 59.240 37.500 0.00 0.00 0.00 3.96
3140 12638 6.764560 ACACACTTTATGTAGTTCGAGGTTTT 59.235 34.615 0.00 0.00 40.64 2.43
3147 12645 7.502339 CAGAAAGACACACTTTATGTAGTTCG 58.498 38.462 0.00 0.00 46.38 3.95
3158 12656 5.586643 GGAAAGAGAACAGAAAGACACACTT 59.413 40.000 0.00 0.00 40.98 3.16
3160 12658 4.273724 GGGAAAGAGAACAGAAAGACACAC 59.726 45.833 0.00 0.00 0.00 3.82
3162 12660 4.273724 GTGGGAAAGAGAACAGAAAGACAC 59.726 45.833 0.00 0.00 0.00 3.67
3166 12664 4.967036 AGAGTGGGAAAGAGAACAGAAAG 58.033 43.478 0.00 0.00 0.00 2.62
3170 12668 4.276926 CCAAAAGAGTGGGAAAGAGAACAG 59.723 45.833 0.00 0.00 34.77 3.16
3171 12669 4.080015 TCCAAAAGAGTGGGAAAGAGAACA 60.080 41.667 0.00 0.00 39.34 3.18
3172 12670 4.461198 TCCAAAAGAGTGGGAAAGAGAAC 58.539 43.478 0.00 0.00 39.34 3.01
3173 12671 4.788925 TCCAAAAGAGTGGGAAAGAGAA 57.211 40.909 0.00 0.00 39.34 2.87
3210 12712 8.491152 GTGATAATATGCACATCACTCACTAAC 58.509 37.037 18.33 0.00 43.32 2.34
3218 12720 7.374228 CGTTCAAAGTGATAATATGCACATCAC 59.626 37.037 18.10 18.10 45.76 3.06
3219 12721 7.065683 ACGTTCAAAGTGATAATATGCACATCA 59.934 33.333 0.00 0.00 37.48 3.07
3220 12722 7.409697 ACGTTCAAAGTGATAATATGCACATC 58.590 34.615 0.00 0.00 37.48 3.06
3221 12723 7.320443 ACGTTCAAAGTGATAATATGCACAT 57.680 32.000 0.00 0.00 37.48 3.21
3253 12755 6.790285 TCGGTTCCTTAAAAACAGACATAC 57.210 37.500 3.57 0.00 0.00 2.39
3256 12758 5.127491 ACATCGGTTCCTTAAAAACAGACA 58.873 37.500 5.70 0.00 34.46 3.41
3257 12759 5.684550 ACATCGGTTCCTTAAAAACAGAC 57.315 39.130 5.70 0.00 34.46 3.51
3259 12761 6.796705 AGTACATCGGTTCCTTAAAAACAG 57.203 37.500 0.00 0.23 0.00 3.16
3269 12771 6.696148 CACATAAGTTCTAGTACATCGGTTCC 59.304 42.308 2.11 0.00 0.00 3.62
3271 12773 7.400599 TCACATAAGTTCTAGTACATCGGTT 57.599 36.000 2.11 0.00 0.00 4.44
3290 12796 6.604396 TCATCTGCTTACAAATGGAATCACAT 59.396 34.615 0.00 0.00 0.00 3.21
3294 12800 7.268199 TCATCATCTGCTTACAAATGGAATC 57.732 36.000 0.00 0.00 0.00 2.52
3362 12868 9.965824 CTGATAACAAGGTTTTACAACTTGAAT 57.034 29.630 2.95 0.00 32.90 2.57
3363 12869 8.410141 CCTGATAACAAGGTTTTACAACTTGAA 58.590 33.333 2.95 0.00 32.90 2.69
3364 12870 7.776030 TCCTGATAACAAGGTTTTACAACTTGA 59.224 33.333 2.95 0.00 32.90 3.02
3365 12871 7.936584 TCCTGATAACAAGGTTTTACAACTTG 58.063 34.615 0.00 0.00 32.90 3.16
3366 12872 8.706322 ATCCTGATAACAAGGTTTTACAACTT 57.294 30.769 0.00 0.00 32.90 2.66
3367 12873 8.706322 AATCCTGATAACAAGGTTTTACAACT 57.294 30.769 0.00 0.00 32.90 3.16
3370 12876 8.723311 CGTAAATCCTGATAACAAGGTTTTACA 58.277 33.333 23.12 2.61 42.31 2.41
3371 12877 8.938906 TCGTAAATCCTGATAACAAGGTTTTAC 58.061 33.333 18.08 18.08 40.67 2.01
3372 12878 9.504708 TTCGTAAATCCTGATAACAAGGTTTTA 57.495 29.630 0.00 0.00 0.00 1.52
3373 12879 7.989416 TCGTAAATCCTGATAACAAGGTTTT 57.011 32.000 0.00 0.00 0.00 2.43
3374 12880 7.664318 AGTTCGTAAATCCTGATAACAAGGTTT 59.336 33.333 0.00 0.00 0.00 3.27
3375 12881 7.166167 AGTTCGTAAATCCTGATAACAAGGTT 58.834 34.615 0.00 0.00 0.00 3.50
3376 12882 6.708285 AGTTCGTAAATCCTGATAACAAGGT 58.292 36.000 0.00 0.00 0.00 3.50
3377 12883 7.119262 ACAAGTTCGTAAATCCTGATAACAAGG 59.881 37.037 0.00 0.00 0.00 3.61
3378 12884 8.029642 ACAAGTTCGTAAATCCTGATAACAAG 57.970 34.615 0.00 0.00 0.00 3.16
3379 12885 7.972832 ACAAGTTCGTAAATCCTGATAACAA 57.027 32.000 0.00 0.00 0.00 2.83
3380 12886 7.277098 GCTACAAGTTCGTAAATCCTGATAACA 59.723 37.037 0.00 0.00 0.00 2.41
3381 12887 7.277098 TGCTACAAGTTCGTAAATCCTGATAAC 59.723 37.037 0.00 0.00 0.00 1.89
3382 12888 7.324935 TGCTACAAGTTCGTAAATCCTGATAA 58.675 34.615 0.00 0.00 0.00 1.75
3383 12889 6.869695 TGCTACAAGTTCGTAAATCCTGATA 58.130 36.000 0.00 0.00 0.00 2.15
3384 12890 5.730550 TGCTACAAGTTCGTAAATCCTGAT 58.269 37.500 0.00 0.00 0.00 2.90
3385 12891 5.142061 TGCTACAAGTTCGTAAATCCTGA 57.858 39.130 0.00 0.00 0.00 3.86
3386 12892 5.580691 TGATGCTACAAGTTCGTAAATCCTG 59.419 40.000 0.00 0.00 0.00 3.86
3387 12893 5.730550 TGATGCTACAAGTTCGTAAATCCT 58.269 37.500 0.00 0.00 0.00 3.24
3388 12894 6.037172 ACATGATGCTACAAGTTCGTAAATCC 59.963 38.462 0.00 0.00 0.00 3.01
3389 12895 6.901887 CACATGATGCTACAAGTTCGTAAATC 59.098 38.462 0.00 0.00 0.00 2.17
3390 12896 6.593770 TCACATGATGCTACAAGTTCGTAAAT 59.406 34.615 0.00 0.00 0.00 1.40
3391 12897 5.929415 TCACATGATGCTACAAGTTCGTAAA 59.071 36.000 0.00 0.00 0.00 2.01
3392 12898 5.474825 TCACATGATGCTACAAGTTCGTAA 58.525 37.500 0.00 0.00 0.00 3.18
3405 12911 6.505044 TGGAAGCATTATATCACATGATGC 57.495 37.500 0.00 2.05 42.47 3.91
3407 12913 6.096423 GCCATGGAAGCATTATATCACATGAT 59.904 38.462 18.40 0.00 37.29 2.45
3408 12914 5.416639 GCCATGGAAGCATTATATCACATGA 59.583 40.000 18.40 0.00 37.29 3.07
3409 12915 5.184287 TGCCATGGAAGCATTATATCACATG 59.816 40.000 18.40 0.00 34.69 3.21
3410 12916 5.326900 TGCCATGGAAGCATTATATCACAT 58.673 37.500 18.40 0.00 34.69 3.21
3421 12927 2.890612 CAAGGATGCCATGGAAGCA 58.109 52.632 18.40 6.78 45.94 3.91
3431 12937 4.975008 GGTGATTTAACCATGCAAGGATGC 60.975 45.833 16.33 0.00 45.34 3.91
3435 12941 3.099141 AGGGTGATTTAACCATGCAAGG 58.901 45.455 6.39 6.39 42.47 3.61
3436 12942 4.220382 TCAAGGGTGATTTAACCATGCAAG 59.780 41.667 0.00 0.00 42.47 4.01
3437 12943 4.155709 TCAAGGGTGATTTAACCATGCAA 58.844 39.130 0.00 0.00 42.47 4.08
3439 12945 3.763897 ACTCAAGGGTGATTTAACCATGC 59.236 43.478 0.00 0.00 42.47 4.06
3440 12946 4.158394 CCACTCAAGGGTGATTTAACCATG 59.842 45.833 0.70 0.00 42.47 3.66
3441 12947 4.202673 ACCACTCAAGGGTGATTTAACCAT 60.203 41.667 0.70 0.00 42.47 3.55
3443 12949 3.763057 ACCACTCAAGGGTGATTTAACC 58.237 45.455 0.70 0.00 39.34 2.85
3452 12958 3.046374 ACTAACTTCACCACTCAAGGGT 58.954 45.455 0.00 0.00 39.88 4.34
3455 12961 4.039245 TCTCCACTAACTTCACCACTCAAG 59.961 45.833 0.00 0.00 0.00 3.02
3456 12962 3.964688 TCTCCACTAACTTCACCACTCAA 59.035 43.478 0.00 0.00 0.00 3.02
3458 12964 4.810191 ATCTCCACTAACTTCACCACTC 57.190 45.455 0.00 0.00 0.00 3.51
3459 12965 5.568620 AAATCTCCACTAACTTCACCACT 57.431 39.130 0.00 0.00 0.00 4.00
3461 12967 6.187727 AGAAAATCTCCACTAACTTCACCA 57.812 37.500 0.00 0.00 0.00 4.17
3462 12968 6.729391 GAGAAAATCTCCACTAACTTCACC 57.271 41.667 0.00 0.00 37.55 4.02
3475 12981 8.093927 TCTCTTTGAGAAGAAGGAGAAAATCTC 58.906 37.037 0.00 0.00 41.19 2.75
3476 12982 7.877612 GTCTCTTTGAGAAGAAGGAGAAAATCT 59.122 37.037 0.00 0.00 40.59 2.40
3477 12983 7.877612 AGTCTCTTTGAGAAGAAGGAGAAAATC 59.122 37.037 0.00 0.00 40.59 2.17
3479 12985 7.130681 AGTCTCTTTGAGAAGAAGGAGAAAA 57.869 36.000 0.00 0.00 40.59 2.29
3480 12986 6.739331 AGTCTCTTTGAGAAGAAGGAGAAA 57.261 37.500 0.00 0.00 40.59 2.52
3482 12988 6.739331 AAAGTCTCTTTGAGAAGAAGGAGA 57.261 37.500 0.00 0.00 40.59 3.71
3483 12989 7.891561 TCTAAAGTCTCTTTGAGAAGAAGGAG 58.108 38.462 5.19 0.00 40.59 3.69
3485 12991 8.894768 TTTCTAAAGTCTCTTTGAGAAGAAGG 57.105 34.615 5.19 0.00 40.59 3.46
3656 13833 1.594293 CTCGTGCCACGTGGTTTCT 60.594 57.895 33.92 0.00 43.14 2.52
3786 14629 8.547069 CCAGCAAACGAAAAAGAATTAAAATGA 58.453 29.630 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.