Multiple sequence alignment - TraesCS7B01G055100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G055100 chr7B 100.000 9147 0 0 1 9147 58536768 58545914 0.000000e+00 16892.0
1 TraesCS7B01G055100 chr7B 92.032 251 15 3 6248 6497 58648196 58648442 1.890000e-91 348.0
2 TraesCS7B01G055100 chr7B 83.700 227 27 4 4930 5147 2477570 2477795 1.200000e-48 206.0
3 TraesCS7B01G055100 chr7B 90.698 86 8 0 6484 6569 58648459 58648544 2.090000e-21 115.0
4 TraesCS7B01G055100 chr7B 91.566 83 7 0 8876 8958 713378839 713378757 2.090000e-21 115.0
5 TraesCS7B01G055100 chr7B 92.308 78 6 0 8876 8953 458527901 458527978 2.700000e-20 111.0
6 TraesCS7B01G055100 chr7B 90.000 80 8 0 8854 8933 246520164 246520085 4.520000e-18 104.0
7 TraesCS7B01G055100 chr7B 90.385 52 4 1 8502 8552 58720502 58720553 5.930000e-07 67.6
8 TraesCS7B01G055100 chr7A 95.843 7000 271 7 1 6993 105161432 105168418 0.000000e+00 11297.0
9 TraesCS7B01G055100 chr7A 89.260 1527 141 10 1 1524 105159370 105160876 0.000000e+00 1890.0
10 TraesCS7B01G055100 chr7A 96.247 746 27 1 7229 7974 105168994 105169738 0.000000e+00 1221.0
11 TraesCS7B01G055100 chr7A 86.609 926 108 14 1 918 105147088 105148005 0.000000e+00 1009.0
12 TraesCS7B01G055100 chr7A 86.922 757 70 17 1 747 105157550 105158287 0.000000e+00 822.0
13 TraesCS7B01G055100 chr7A 90.217 552 33 4 1040 1591 105148141 105148671 0.000000e+00 701.0
14 TraesCS7B01G055100 chr7A 87.942 481 40 6 1045 1524 105158352 105158815 1.340000e-152 551.0
15 TraesCS7B01G055100 chr7A 89.783 323 13 13 7973 8288 105169905 105170214 6.660000e-106 396.0
16 TraesCS7B01G055100 chr7A 92.050 239 15 2 6248 6485 105222755 105222990 5.290000e-87 333.0
17 TraesCS7B01G055100 chr7A 90.551 254 14 5 6987 7240 105168561 105168804 2.460000e-85 327.0
18 TraesCS7B01G055100 chr7A 93.684 95 6 0 1586 1680 105157250 105157344 9.570000e-30 143.0
19 TraesCS7B01G055100 chr7A 97.436 78 2 0 8281 8358 105170406 105170483 5.760000e-27 134.0
20 TraesCS7B01G055100 chr7A 90.291 103 9 1 6477 6579 105223012 105223113 5.760000e-27 134.0
21 TraesCS7B01G055100 chr7A 95.890 73 2 1 8876 8947 690364484 690364556 5.800000e-22 117.0
22 TraesCS7B01G055100 chr7A 90.000 80 6 1 8322 8401 105170473 105170550 1.620000e-17 102.0
23 TraesCS7B01G055100 chr7D 96.623 6782 211 11 1 6773 101466988 101473760 0.000000e+00 11239.0
24 TraesCS7B01G055100 chr7D 89.402 1689 93 30 6932 8592 101473759 101475389 0.000000e+00 2049.0
25 TraesCS7B01G055100 chr7D 87.188 921 101 12 1 917 101436774 101437681 0.000000e+00 1031.0
26 TraesCS7B01G055100 chr7D 91.102 753 45 4 934 1680 101437741 101438477 0.000000e+00 1000.0
27 TraesCS7B01G055100 chr7D 84.797 934 104 26 1 920 101438683 101439592 0.000000e+00 904.0
28 TraesCS7B01G055100 chr7D 86.767 597 57 11 934 1524 101439649 101440229 0.000000e+00 645.0
29 TraesCS7B01G055100 chr7D 92.128 343 26 1 6251 6592 101524584 101524926 4.970000e-132 483.0
30 TraesCS7B01G055100 chr7D 90.789 228 21 0 8910 9137 101475428 101475655 1.150000e-78 305.0
31 TraesCS7B01G055100 chr7D 87.234 94 8 4 6679 6771 101548815 101548905 4.520000e-18 104.0
32 TraesCS7B01G055100 chr6B 94.297 263 14 1 8608 8869 76267026 76267288 1.430000e-107 401.0
33 TraesCS7B01G055100 chr6B 93.585 265 17 0 8615 8879 248289705 248289441 6.660000e-106 396.0
34 TraesCS7B01G055100 chr6B 91.463 82 6 1 8876 8956 702668809 702668728 2.700000e-20 111.0
35 TraesCS7B01G055100 chr3B 93.609 266 17 0 8614 8879 102324378 102324113 1.850000e-106 398.0
36 TraesCS7B01G055100 chr3B 92.647 272 20 0 8615 8886 119079499 119079228 8.610000e-105 392.0
37 TraesCS7B01G055100 chr3B 92.279 272 21 0 8608 8879 23332564 23332835 4.010000e-103 387.0
38 TraesCS7B01G055100 chr3B 92.208 77 6 0 8876 8952 54592479 54592555 9.710000e-20 110.0
39 TraesCS7B01G055100 chr5B 92.143 280 21 1 8608 8886 69608297 69608576 2.390000e-105 394.0
40 TraesCS7B01G055100 chr5B 92.308 273 21 0 8608 8880 477903363 477903635 1.110000e-103 388.0
41 TraesCS7B01G055100 chr5B 84.375 224 32 2 4926 5147 562303715 562303937 5.560000e-52 217.0
42 TraesCS7B01G055100 chr4B 93.585 265 16 1 8615 8878 666681533 666681269 2.390000e-105 394.0
43 TraesCS7B01G055100 chr4B 93.590 78 5 0 8864 8941 237900977 237901054 5.800000e-22 117.0
44 TraesCS7B01G055100 chr5A 92.910 268 19 0 8614 8881 2187202 2187469 3.100000e-104 390.0
45 TraesCS7B01G055100 chr4D 93.333 180 11 1 6766 6944 230542544 230542723 1.960000e-66 265.0
46 TraesCS7B01G055100 chr6D 94.186 172 10 0 6762 6933 406204905 406204734 7.040000e-66 263.0
47 TraesCS7B01G055100 chr3D 93.642 173 11 0 6763 6935 571465358 571465530 9.110000e-65 259.0
48 TraesCS7B01G055100 chr3D 93.642 173 11 0 6763 6935 579494962 579494790 9.110000e-65 259.0
49 TraesCS7B01G055100 chr1B 95.122 164 8 0 6772 6935 183877361 183877198 9.110000e-65 259.0
50 TraesCS7B01G055100 chr2D 91.758 182 13 2 6769 6949 305514866 305515046 1.520000e-62 252.0
51 TraesCS7B01G055100 chr1D 92.179 179 11 2 6760 6936 311986600 311986777 5.480000e-62 250.0
52 TraesCS7B01G055100 chr5D 90.526 190 12 5 6748 6933 498722094 498721907 7.090000e-61 246.0
53 TraesCS7B01G055100 chr2B 84.519 239 34 2 4914 5150 658483621 658483384 5.520000e-57 233.0
54 TraesCS7B01G055100 chr2B 84.746 236 33 2 4914 5147 672322137 672322371 5.520000e-57 233.0
55 TraesCS7B01G055100 chr2A 84.615 221 30 3 4930 5147 87874880 87875099 5.560000e-52 217.0
56 TraesCS7B01G055100 chr6A 93.590 78 5 0 8872 8949 5278104 5278027 5.800000e-22 117.0
57 TraesCS7B01G055100 chr6A 79.245 106 20 1 8487 8592 74106278 74106175 1.270000e-08 73.1
58 TraesCS7B01G055100 chr4A 88.889 90 8 2 8876 8964 532602551 532602463 9.710000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G055100 chr7B 58536768 58545914 9146 False 16892.0 16892 100.000000 1 9147 1 chr7B.!!$F2 9146
1 TraesCS7B01G055100 chr7A 105157250 105170550 13300 False 1688.3 11297 91.766800 1 8401 10 chr7A.!!$F3 8400
2 TraesCS7B01G055100 chr7A 105147088 105148671 1583 False 855.0 1009 88.413000 1 1591 2 chr7A.!!$F2 1590
3 TraesCS7B01G055100 chr7D 101466988 101475655 8667 False 4531.0 11239 92.271333 1 9137 3 chr7D.!!$F4 9136
4 TraesCS7B01G055100 chr7D 101436774 101440229 3455 False 895.0 1031 87.463500 1 1680 4 chr7D.!!$F3 1679

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
859 5047 0.236711 CTCTGAAGCGGTTGCACTTG 59.763 55.000 3.70 0.0 46.23 3.16 F
1561 5851 1.329256 ACTACCTTGAGCGTCAGTGT 58.671 50.000 0.00 0.0 0.00 3.55 F
2239 6529 0.954452 CTTTTGAGCTCGCACCCTTT 59.046 50.000 9.64 0.0 0.00 3.11 F
2947 7237 1.197036 CTGCATGCTGACAAGTCACTG 59.803 52.381 20.33 0.0 35.46 3.66 F
3541 7831 0.247655 GGCATAATGTGTGCACGTCG 60.248 55.000 13.13 0.0 44.25 5.12 F
4021 8311 1.203287 TCACTGACAGAGGAGAATGCG 59.797 52.381 10.08 0.0 0.00 4.73 F
4735 9025 1.260825 CGTGCATTCATAGCTCTGCTG 59.739 52.381 1.96 0.0 40.10 4.41 F
5463 9796 2.093288 TGCCATCAAGTCCTGCTCTTAG 60.093 50.000 0.00 0.0 0.00 2.18 F
6616 10949 0.251787 AGGCAGTAAAAAGGGCAGGG 60.252 55.000 0.00 0.0 0.00 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1906 6196 0.040958 CTTCAGCAGACACGGCAAAC 60.041 55.000 0.00 0.0 0.00 2.93 R
2767 7057 0.096976 CCCAACGAACTAATGCAGCG 59.903 55.000 0.00 0.0 0.00 5.18 R
3124 7414 1.372499 GCACTCTAACGCCACGTCA 60.372 57.895 0.00 0.0 39.99 4.35 R
4641 8931 1.089920 CAAGCTGGCAGTATCACCAC 58.910 55.000 17.16 0.0 0.00 4.16 R
5188 9521 1.003116 GCTGATTCCATAGCTGTTGCG 60.003 52.381 0.00 0.0 45.42 4.85 R
5463 9796 1.271434 GGAGGGACTTCACTGGTTTCC 60.271 57.143 0.00 0.0 41.55 3.13 R
6043 10376 3.195698 GCGGACATCAGCGGAACC 61.196 66.667 0.00 0.0 0.00 3.62 R
6867 11200 3.508762 ACGGACTACATACGAAGCAAAG 58.491 45.455 0.00 0.0 0.00 2.77 R
8540 13647 0.483770 ATCCATATGCCATGTGCCCA 59.516 50.000 0.00 0.0 40.16 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 379 4.168014 TGTTCGTGTTCGTGGATATACAC 58.832 43.478 8.13 8.13 37.97 2.90
309 614 4.850859 TGTTTATCGTTCGCATGGTAAG 57.149 40.909 0.00 0.00 0.00 2.34
314 619 7.042992 TGTTTATCGTTCGCATGGTAAGATAAG 60.043 37.037 0.00 0.00 32.82 1.73
334 639 0.611200 TGTACGGATGGTTGGTGAGG 59.389 55.000 0.00 0.00 0.00 3.86
335 640 0.899720 GTACGGATGGTTGGTGAGGA 59.100 55.000 0.00 0.00 0.00 3.71
341 646 3.627577 CGGATGGTTGGTGAGGAAATAAG 59.372 47.826 0.00 0.00 0.00 1.73
348 653 7.338710 TGGTTGGTGAGGAAATAAGATCTTAG 58.661 38.462 19.51 0.00 0.00 2.18
398 703 9.935241 AACCTATCTATAAGTATACGACTTCGA 57.065 33.333 5.47 0.00 45.81 3.71
419 725 4.533222 GATGTAACAAAACCACCAACTCG 58.467 43.478 0.00 0.00 0.00 4.18
496 806 1.730501 AGTCGAATGCCATGACACAG 58.269 50.000 0.00 0.00 35.09 3.66
518 828 4.926238 AGTCAGTGAACAACGAAGATGATC 59.074 41.667 0.00 0.00 33.05 2.92
560 870 7.503549 TGCATCAAGAAATCAGATTCTAGCTA 58.496 34.615 0.00 0.00 38.69 3.32
651 2788 2.809174 CAACGACGGCGAGCATCA 60.809 61.111 22.49 0.00 41.64 3.07
705 2842 3.009723 GGCCGAAATCTTGAAGTCATGA 58.990 45.455 0.00 0.00 35.04 3.07
758 4946 4.575885 TGTAATCTTACAGGACACTTGGC 58.424 43.478 0.00 0.00 38.64 4.52
791 4979 3.954200 TCTAAATTCCATGCACTGCTCA 58.046 40.909 1.98 0.00 0.00 4.26
808 4996 3.437741 TGCTCATGCATCTGTTTGTACTG 59.562 43.478 0.00 0.00 45.31 2.74
830 5018 7.142021 ACTGCTCGTGTATACAATATCTGAAG 58.858 38.462 7.25 2.22 0.00 3.02
851 5039 2.495084 GAAAAACCTCTCTGAAGCGGT 58.505 47.619 0.00 0.00 42.53 5.68
859 5047 0.236711 CTCTGAAGCGGTTGCACTTG 59.763 55.000 3.70 0.00 46.23 3.16
876 5066 4.662145 CACTTGATTTTCGCAATACTCCC 58.338 43.478 0.00 0.00 0.00 4.30
922 5146 5.921976 GTCGTTAATAGGGTTTTGGGTTTTG 59.078 40.000 0.00 0.00 0.00 2.44
1038 5273 2.997897 GCCTCGACCTCAGGTGGT 60.998 66.667 0.00 0.00 44.10 4.16
1189 5475 2.275418 CATTTCCCCAGTCCCCGG 59.725 66.667 0.00 0.00 0.00 5.73
1282 5572 2.597340 CGGATCAAGGGCCACCAT 59.403 61.111 6.18 0.00 40.13 3.55
1561 5851 1.329256 ACTACCTTGAGCGTCAGTGT 58.671 50.000 0.00 0.00 0.00 3.55
1620 5910 2.685850 TGCACAGATGATGACTCTGG 57.314 50.000 5.41 0.00 43.58 3.86
1702 5992 8.719648 CAGAGATTGCTATCCATCATTAAAGAC 58.280 37.037 4.43 0.00 0.00 3.01
1906 6196 5.188434 TCTGGCTCTTATGATGTTGGAAAG 58.812 41.667 0.00 0.00 0.00 2.62
1912 6202 6.024552 TCTTATGATGTTGGAAAGTTTGCC 57.975 37.500 4.53 1.37 0.00 4.52
1964 6254 5.860941 TTATGCTAAAGCTCAGCTACTCT 57.139 39.130 18.16 0.00 38.25 3.24
1973 6263 5.181690 AGCTCAGCTACTCTTTATTCTCG 57.818 43.478 0.00 0.00 36.99 4.04
2170 6460 1.264045 GCCTGCTCCTGTCTCTTCCT 61.264 60.000 0.00 0.00 0.00 3.36
2230 6520 1.593296 CCCAGCAGGCTTTTGAGCTC 61.593 60.000 6.82 6.82 34.61 4.09
2239 6529 0.954452 CTTTTGAGCTCGCACCCTTT 59.046 50.000 9.64 0.00 0.00 3.11
2341 6631 7.759465 TGAGATCTTTCATTTCAGCTTTCATC 58.241 34.615 0.00 0.00 0.00 2.92
2498 6788 6.944290 TCCAATCAGATCTGTTCTTCAAATGT 59.056 34.615 21.92 0.00 29.93 2.71
2632 6922 3.502211 GGCTAACAACACTGTATGCAACT 59.498 43.478 0.00 0.00 36.31 3.16
2719 7009 2.441750 TCCTGGTATGGAAGGCATTACC 59.558 50.000 0.00 0.00 39.61 2.85
2763 7053 7.013274 TGGTTACATTTTGAGAAGTCTTGAAGG 59.987 37.037 0.00 0.00 0.00 3.46
2767 7057 4.900635 TTTGAGAAGTCTTGAAGGCAAC 57.099 40.909 0.00 0.00 0.00 4.17
2809 7099 1.698506 TCCCACATTCAGGCGTTTTT 58.301 45.000 0.00 0.00 0.00 1.94
2881 7171 3.668447 AGCCTGCGATATAATGGACTTG 58.332 45.455 0.00 0.00 0.00 3.16
2947 7237 1.197036 CTGCATGCTGACAAGTCACTG 59.803 52.381 20.33 0.00 35.46 3.66
3070 7360 5.181056 TGGTAATAATGCCAGCATAATGTCG 59.819 40.000 5.39 0.00 36.27 4.35
3082 7372 5.003804 AGCATAATGTCGAAAACCTTCAGT 58.996 37.500 0.00 0.00 0.00 3.41
3089 7379 4.936411 TGTCGAAAACCTTCAGTGTGTTAA 59.064 37.500 0.00 0.00 0.00 2.01
3117 7407 2.615391 TCTGAAGTGTGTCCCATACCA 58.385 47.619 0.00 0.00 0.00 3.25
3124 7414 3.153919 GTGTGTCCCATACCATGTGTTT 58.846 45.455 0.00 0.00 0.00 2.83
3139 7429 1.191647 GTGTTTGACGTGGCGTTAGAG 59.808 52.381 0.00 0.00 41.37 2.43
3229 7519 1.106351 TGCTTTTTGCCGCCTCTGAA 61.106 50.000 0.00 0.00 42.00 3.02
3322 7612 1.657594 GCCGCTGATGACATGATATCG 59.342 52.381 0.00 1.42 0.00 2.92
3331 7621 3.317150 TGACATGATATCGCCGTTCATC 58.683 45.455 0.00 0.00 0.00 2.92
3407 7697 0.606604 TAGTCGCTGGAAGACAACCC 59.393 55.000 0.00 0.00 40.84 4.11
3527 7817 6.422333 TCTATCCACAATGTTCTTTGGCATA 58.578 36.000 0.00 0.00 0.00 3.14
3528 7818 5.999205 ATCCACAATGTTCTTTGGCATAA 57.001 34.783 0.00 0.00 0.00 1.90
3541 7831 0.247655 GGCATAATGTGTGCACGTCG 60.248 55.000 13.13 0.00 44.25 5.12
3571 7861 2.690778 GGAATCGCGTGGCAGCTTT 61.691 57.895 5.77 0.00 34.40 3.51
3757 8047 6.804295 CAGCTACAATATCGTCTATGTCCTTC 59.196 42.308 0.00 0.00 0.00 3.46
3877 8167 6.294397 GCTTTCTTGTTGATGGTTCAGAGATT 60.294 38.462 0.00 0.00 32.27 2.40
3880 8170 5.474532 TCTTGTTGATGGTTCAGAGATTTGG 59.525 40.000 0.00 0.00 32.27 3.28
3882 8172 5.384336 TGTTGATGGTTCAGAGATTTGGAA 58.616 37.500 0.00 0.00 32.27 3.53
4021 8311 1.203287 TCACTGACAGAGGAGAATGCG 59.797 52.381 10.08 0.00 0.00 4.73
4144 8434 6.432783 TGTTGGGATACATTGAAAATTCGACT 59.567 34.615 0.00 0.00 39.74 4.18
4276 8566 2.526432 AGAACGTTCTGGGAGAGCTTA 58.474 47.619 29.24 0.00 35.89 3.09
4280 8570 3.034635 ACGTTCTGGGAGAGCTTATCAT 58.965 45.455 0.00 0.00 0.00 2.45
4343 8633 4.449068 GTGTTGACACTGTCGATGAGAAAT 59.551 41.667 7.01 0.00 43.25 2.17
4488 8778 5.278957 GGCAAAAAGAACCTTCTGCATCTTA 60.279 40.000 12.63 0.00 37.65 2.10
4555 8845 9.571810 TTGGAAGATTTTATCAATCATTTGTCG 57.428 29.630 0.00 0.00 34.32 4.35
4576 8866 2.103263 GAGCAACGGATACCAGAAGGAT 59.897 50.000 0.00 0.00 38.69 3.24
4630 8920 5.006261 CGTTTGCATCATCCGTCTAATAACA 59.994 40.000 0.00 0.00 0.00 2.41
4641 8931 5.929992 TCCGTCTAATAACAAAGTTGTCCAG 59.070 40.000 0.00 0.00 41.31 3.86
4735 9025 1.260825 CGTGCATTCATAGCTCTGCTG 59.739 52.381 1.96 0.00 40.10 4.41
4780 9070 3.134804 ACAGTGGTGAGCAAGAACTTACT 59.865 43.478 0.00 0.00 0.00 2.24
4994 9327 6.536582 CACTCGTGATGATCTTGGAGTTAAAT 59.463 38.462 9.67 0.00 32.81 1.40
5266 9599 8.691797 ACTGTAGATTCTCTATTTCCTGAAGTC 58.308 37.037 0.00 0.00 30.76 3.01
5337 9670 4.221041 ACTGCTTACTCTTACCAGGTTCTC 59.779 45.833 0.00 0.00 0.00 2.87
5463 9796 2.093288 TGCCATCAAGTCCTGCTCTTAG 60.093 50.000 0.00 0.00 0.00 2.18
5500 9833 3.604582 CCTCCTTGTTCTGATTCTGTCC 58.395 50.000 0.00 0.00 0.00 4.02
5503 9836 4.645535 TCCTTGTTCTGATTCTGTCCTTG 58.354 43.478 0.00 0.00 0.00 3.61
5767 10100 4.398988 TGTCAGAATGGTGCAATATTGTCC 59.601 41.667 16.61 17.67 36.16 4.02
6043 10376 2.224378 TGTCAGCTTCCTTTCAGGACAG 60.224 50.000 0.00 0.00 45.78 3.51
6182 10515 3.735237 TCCTCTCACTTCTGTGTGTTC 57.265 47.619 0.00 0.00 44.14 3.18
6324 10657 4.411869 ACCAAACTGGAACCCATCATTTTT 59.588 37.500 0.00 0.00 40.96 1.94
6404 10737 2.821969 AGCAAACATGGATGGTTCAGAC 59.178 45.455 0.00 0.00 35.04 3.51
6616 10949 0.251787 AGGCAGTAAAAAGGGCAGGG 60.252 55.000 0.00 0.00 0.00 4.45
6844 11177 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
6867 11200 6.856426 GCATTTTAAAGTGTAGGTTCACTCAC 59.144 38.462 11.77 0.00 46.25 3.51
6874 11207 3.877508 GTGTAGGTTCACTCACTTTGCTT 59.122 43.478 0.00 0.00 35.68 3.91
6876 11209 2.213499 AGGTTCACTCACTTTGCTTCG 58.787 47.619 0.00 0.00 0.00 3.79
6882 11215 5.128992 TCACTCACTTTGCTTCGTATGTA 57.871 39.130 0.00 0.00 0.00 2.29
6887 11220 3.303495 CACTTTGCTTCGTATGTAGTCCG 59.697 47.826 0.00 0.00 0.00 4.79
6897 11230 6.441093 TCGTATGTAGTCCGTAGTGAAATT 57.559 37.500 0.00 0.00 0.00 1.82
6957 11290 7.818642 AGTTGTATAAGATACATCTAGACCGC 58.181 38.462 0.00 0.00 35.76 5.68
7046 11529 6.776603 ACCGTATTCCACTATTCTAGCTTAGT 59.223 38.462 0.00 0.00 0.00 2.24
7048 11531 7.175293 CCGTATTCCACTATTCTAGCTTAGTCT 59.825 40.741 0.00 0.00 0.00 3.24
7083 11566 6.633500 TTCTAAGTTGCTATGTGTTTTGCT 57.367 33.333 0.00 0.00 0.00 3.91
7084 11567 6.000891 TCTAAGTTGCTATGTGTTTTGCTG 57.999 37.500 0.00 0.00 0.00 4.41
7086 11569 2.061028 GTTGCTATGTGTTTTGCTGCC 58.939 47.619 0.00 0.00 0.00 4.85
7088 11571 1.541147 TGCTATGTGTTTTGCTGCCTC 59.459 47.619 0.00 0.00 0.00 4.70
7089 11572 1.541147 GCTATGTGTTTTGCTGCCTCA 59.459 47.619 0.00 0.00 0.00 3.86
7090 11573 2.165030 GCTATGTGTTTTGCTGCCTCAT 59.835 45.455 0.00 0.00 0.00 2.90
7091 11574 2.736144 ATGTGTTTTGCTGCCTCATG 57.264 45.000 0.00 0.00 0.00 3.07
7094 11577 1.337703 GTGTTTTGCTGCCTCATGTCA 59.662 47.619 0.00 0.00 0.00 3.58
7095 11578 2.029649 GTGTTTTGCTGCCTCATGTCAT 60.030 45.455 0.00 0.00 0.00 3.06
7096 11579 2.229543 TGTTTTGCTGCCTCATGTCATC 59.770 45.455 0.00 0.00 0.00 2.92
7097 11580 2.490903 GTTTTGCTGCCTCATGTCATCT 59.509 45.455 0.00 0.00 0.00 2.90
7165 11648 8.157476 AGGCTTAGAAAGATTTGTAGAAGTTGA 58.843 33.333 0.00 0.00 0.00 3.18
7177 11660 8.477419 TTTGTAGAAGTTGAAGGGAATGATTT 57.523 30.769 0.00 0.00 0.00 2.17
7198 11681 9.328845 TGATTTAACGGGGTATACTTCATTTAC 57.671 33.333 2.25 0.00 0.00 2.01
7231 11915 7.507733 AGCTAATGAATTTCATAGAGCTTGG 57.492 36.000 27.33 12.24 45.96 3.61
7240 11924 4.327982 TCATAGAGCTTGGTGCAGTATC 57.672 45.455 0.00 0.00 45.94 2.24
7384 12068 9.169592 GTGCTATTAAAACCACTAACCAGATTA 57.830 33.333 0.00 0.00 0.00 1.75
7422 12106 4.754372 TGCTGAGTGATAAAGCAAACAG 57.246 40.909 0.00 0.00 43.65 3.16
7515 12208 2.176798 TGGAACTCAATCCCAAAGGTGT 59.823 45.455 0.00 0.00 38.82 4.16
7603 12296 9.973450 TTAAAATCTAGCTCAGATATGAGTGAC 57.027 33.333 18.17 2.54 43.56 3.67
7686 12388 4.339247 CACCTTTTCCTGATCACAGTTTGT 59.661 41.667 0.00 0.00 42.05 2.83
7751 12453 1.227383 GGGGGCAAATGGATCGAGT 59.773 57.895 0.00 0.00 0.00 4.18
7841 12543 1.686325 AACTGTGCGTGTCCCAGTCT 61.686 55.000 0.00 0.00 38.44 3.24
8045 12915 1.408702 TGTTTTCTTGGTTGGCAGCTC 59.591 47.619 0.24 0.00 0.00 4.09
8139 13009 2.985406 GCTCAAAGCAACTTCCTCAG 57.015 50.000 0.00 0.00 41.89 3.35
8172 13042 4.399618 AGTGTGTAGATTGTATCTCTGCGT 59.600 41.667 0.00 0.00 40.76 5.24
8244 13127 0.599558 CGACCCGTTTACAGTGGAGA 59.400 55.000 0.00 0.00 0.00 3.71
8246 13129 0.316204 ACCCGTTTACAGTGGAGACG 59.684 55.000 11.39 11.39 0.00 4.18
8247 13130 0.599558 CCCGTTTACAGTGGAGACGA 59.400 55.000 19.41 0.00 35.90 4.20
8248 13131 1.203994 CCCGTTTACAGTGGAGACGAT 59.796 52.381 19.41 0.00 35.90 3.73
8249 13132 2.527100 CCGTTTACAGTGGAGACGATC 58.473 52.381 19.41 0.00 35.90 3.69
8250 13133 2.174764 CGTTTACAGTGGAGACGATCG 58.825 52.381 12.97 14.88 35.90 3.69
8251 13134 1.918609 GTTTACAGTGGAGACGATCGC 59.081 52.381 16.60 8.27 0.00 4.58
8252 13135 1.460504 TTACAGTGGAGACGATCGCT 58.539 50.000 16.60 13.40 0.00 4.93
8253 13136 1.015109 TACAGTGGAGACGATCGCTC 58.985 55.000 23.01 23.01 0.00 5.03
8369 13476 4.449068 GCATGCATGTATGTACAGTAGGAC 59.551 45.833 26.79 1.51 39.92 3.85
8384 13491 6.017192 ACAGTAGGACAAACTCTATCAAGGA 58.983 40.000 0.00 0.00 0.00 3.36
8389 13496 7.020827 AGGACAAACTCTATCAAGGATTTCA 57.979 36.000 0.00 0.00 0.00 2.69
8395 13502 3.541632 TCTATCAAGGATTTCAACCCGC 58.458 45.455 0.00 0.00 0.00 6.13
8404 13511 1.593196 TTTCAACCCGCTCTGAACAG 58.407 50.000 0.00 0.00 31.41 3.16
8418 13525 2.391724 GAACAGGGTCCAACCTCGCA 62.392 60.000 0.00 0.00 39.34 5.10
8420 13527 4.003788 AGGGTCCAACCTCGCACG 62.004 66.667 0.00 0.00 38.64 5.34
8425 13532 0.810031 GTCCAACCTCGCACGCATAT 60.810 55.000 0.00 0.00 0.00 1.78
8438 13545 3.557595 GCACGCATATATAGGGCAAGATC 59.442 47.826 9.08 0.00 33.87 2.75
8439 13546 3.798878 CACGCATATATAGGGCAAGATCG 59.201 47.826 9.17 0.00 0.00 3.69
8441 13548 4.081642 ACGCATATATAGGGCAAGATCGTT 60.082 41.667 9.17 0.00 0.00 3.85
8442 13549 4.870426 CGCATATATAGGGCAAGATCGTTT 59.130 41.667 9.17 0.00 0.00 3.60
8443 13550 5.005779 CGCATATATAGGGCAAGATCGTTTC 59.994 44.000 9.17 0.00 0.00 2.78
8444 13551 6.109359 GCATATATAGGGCAAGATCGTTTCT 58.891 40.000 0.00 0.00 35.70 2.52
8445 13552 6.256757 GCATATATAGGGCAAGATCGTTTCTC 59.743 42.308 0.00 0.00 31.78 2.87
8446 13553 5.808366 ATATAGGGCAAGATCGTTTCTCA 57.192 39.130 0.00 0.00 31.78 3.27
8448 13555 2.911484 AGGGCAAGATCGTTTCTCATC 58.089 47.619 0.00 0.00 31.78 2.92
8449 13556 2.237143 AGGGCAAGATCGTTTCTCATCA 59.763 45.455 0.00 0.00 31.78 3.07
8450 13557 3.009723 GGGCAAGATCGTTTCTCATCAA 58.990 45.455 0.00 0.00 31.78 2.57
8451 13558 3.440173 GGGCAAGATCGTTTCTCATCAAA 59.560 43.478 0.00 0.00 31.78 2.69
8452 13559 4.082787 GGGCAAGATCGTTTCTCATCAAAA 60.083 41.667 0.00 0.00 31.78 2.44
8453 13560 5.460646 GGCAAGATCGTTTCTCATCAAAAA 58.539 37.500 0.00 0.00 31.78 1.94
8497 13604 3.063997 GTCTTGTATCAAATCTGGCACGG 59.936 47.826 0.00 0.00 0.00 4.94
8506 13613 0.678048 ATCTGGCACGGCTTTTCCTC 60.678 55.000 0.00 0.00 32.53 3.71
8507 13614 2.668212 TGGCACGGCTTTTCCTCG 60.668 61.111 0.00 0.00 0.00 4.63
8508 13615 3.431725 GGCACGGCTTTTCCTCGG 61.432 66.667 0.00 0.00 0.00 4.63
8519 13626 1.611519 TTTCCTCGGGAAACGCATTT 58.388 45.000 12.41 0.00 45.42 2.32
8528 13635 3.699067 GGGAAACGCATTTGATCTGATG 58.301 45.455 0.00 0.00 0.00 3.07
8540 13647 7.658261 CATTTGATCTGATGCTGATATTTGGT 58.342 34.615 0.00 0.00 0.00 3.67
8564 13671 2.161012 GCACATGGCATATGGATCTTCG 59.839 50.000 8.00 0.00 43.97 3.79
8596 13703 3.429141 CGCAGGGAAGCAGTGCTG 61.429 66.667 20.55 7.74 39.62 4.41
8607 13714 3.625897 AGTGCTGCTGCCACCGTA 61.626 61.111 13.47 0.00 38.71 4.02
8608 13715 2.668212 GTGCTGCTGCCACCGTAA 60.668 61.111 13.47 0.00 38.71 3.18
8609 13716 2.112087 TGCTGCTGCCACCGTAAA 59.888 55.556 13.47 0.00 38.71 2.01
8610 13717 2.258013 TGCTGCTGCCACCGTAAAC 61.258 57.895 13.47 0.00 38.71 2.01
8611 13718 1.966451 GCTGCTGCCACCGTAAACT 60.966 57.895 3.85 0.00 0.00 2.66
8612 13719 0.672401 GCTGCTGCCACCGTAAACTA 60.672 55.000 3.85 0.00 0.00 2.24
8613 13720 1.803334 CTGCTGCCACCGTAAACTAA 58.197 50.000 0.00 0.00 0.00 2.24
8626 13733 4.098501 CCGTAAACTAATACTCCCTCCGTT 59.901 45.833 0.00 0.00 0.00 4.44
8628 13735 4.750021 AAACTAATACTCCCTCCGTTCC 57.250 45.455 0.00 0.00 0.00 3.62
8629 13736 3.684408 ACTAATACTCCCTCCGTTCCT 57.316 47.619 0.00 0.00 0.00 3.36
8630 13737 3.991683 ACTAATACTCCCTCCGTTCCTT 58.008 45.455 0.00 0.00 0.00 3.36
8631 13738 3.705072 ACTAATACTCCCTCCGTTCCTTG 59.295 47.826 0.00 0.00 0.00 3.61
8632 13739 2.544844 ATACTCCCTCCGTTCCTTGA 57.455 50.000 0.00 0.00 0.00 3.02
8633 13740 2.544844 TACTCCCTCCGTTCCTTGAT 57.455 50.000 0.00 0.00 0.00 2.57
8634 13741 2.544844 ACTCCCTCCGTTCCTTGATA 57.455 50.000 0.00 0.00 0.00 2.15
8636 13743 4.194678 ACTCCCTCCGTTCCTTGATATA 57.805 45.455 0.00 0.00 0.00 0.86
8637 13744 4.553678 ACTCCCTCCGTTCCTTGATATAA 58.446 43.478 0.00 0.00 0.00 0.98
8638 13745 4.589374 ACTCCCTCCGTTCCTTGATATAAG 59.411 45.833 0.00 0.00 0.00 1.73
8639 13746 3.901844 TCCCTCCGTTCCTTGATATAAGG 59.098 47.826 0.00 0.00 38.78 2.69
8640 13747 3.646637 CCCTCCGTTCCTTGATATAAGGT 59.353 47.826 5.67 0.00 38.55 3.50
8641 13748 4.503296 CCCTCCGTTCCTTGATATAAGGTG 60.503 50.000 5.67 0.00 38.55 4.00
8642 13749 4.101119 CCTCCGTTCCTTGATATAAGGTGT 59.899 45.833 5.67 0.00 38.55 4.16
8643 13750 5.303589 CCTCCGTTCCTTGATATAAGGTGTA 59.696 44.000 5.67 0.00 38.55 2.90
8644 13751 6.014499 CCTCCGTTCCTTGATATAAGGTGTAT 60.014 42.308 5.67 0.00 38.55 2.29
8645 13752 7.177921 CCTCCGTTCCTTGATATAAGGTGTATA 59.822 40.741 5.67 0.00 38.55 1.47
8646 13753 8.118976 TCCGTTCCTTGATATAAGGTGTATAG 57.881 38.462 5.67 0.00 38.55 1.31
8647 13754 7.946219 TCCGTTCCTTGATATAAGGTGTATAGA 59.054 37.037 5.67 0.00 38.55 1.98
8648 13755 8.750298 CCGTTCCTTGATATAAGGTGTATAGAT 58.250 37.037 5.67 0.00 38.55 1.98
8678 13785 9.238368 TGAGAAAAATTCCGAAATATAAGGTGT 57.762 29.630 0.00 0.00 0.00 4.16
8683 13790 9.744468 AAAATTCCGAAATATAAGGTGTATTGC 57.256 29.630 0.00 0.00 0.00 3.56
8684 13791 6.870971 TTCCGAAATATAAGGTGTATTGCC 57.129 37.500 0.00 0.00 0.00 4.52
8685 13792 6.182507 TCCGAAATATAAGGTGTATTGCCT 57.817 37.500 0.00 0.00 38.11 4.75
8686 13793 6.597562 TCCGAAATATAAGGTGTATTGCCTT 58.402 36.000 2.07 2.07 46.90 4.35
8687 13794 6.485313 TCCGAAATATAAGGTGTATTGCCTTG 59.515 38.462 6.83 0.00 45.14 3.61
8688 13795 6.142817 CGAAATATAAGGTGTATTGCCTTGC 58.857 40.000 6.83 0.00 45.14 4.01
8689 13796 6.238621 CGAAATATAAGGTGTATTGCCTTGCA 60.239 38.462 6.83 0.00 45.14 4.08
8690 13797 7.522073 CGAAATATAAGGTGTATTGCCTTGCAT 60.522 37.037 6.83 0.00 45.14 3.96
8691 13798 6.824305 ATATAAGGTGTATTGCCTTGCATC 57.176 37.500 6.83 0.00 45.14 3.91
8692 13799 2.512692 AGGTGTATTGCCTTGCATCA 57.487 45.000 0.00 0.00 38.76 3.07
8693 13800 2.094675 AGGTGTATTGCCTTGCATCAC 58.905 47.619 0.00 9.43 38.76 3.06
8694 13801 2.094675 GGTGTATTGCCTTGCATCACT 58.905 47.619 14.26 0.00 38.76 3.41
8695 13802 2.098117 GGTGTATTGCCTTGCATCACTC 59.902 50.000 14.26 6.73 38.76 3.51
8696 13803 2.009051 TGTATTGCCTTGCATCACTCG 58.991 47.619 0.00 0.00 38.76 4.18
8697 13804 2.009774 GTATTGCCTTGCATCACTCGT 58.990 47.619 0.00 0.00 38.76 4.18
8698 13805 1.538047 ATTGCCTTGCATCACTCGTT 58.462 45.000 0.00 0.00 38.76 3.85
8699 13806 1.317613 TTGCCTTGCATCACTCGTTT 58.682 45.000 0.00 0.00 38.76 3.60
8700 13807 0.592637 TGCCTTGCATCACTCGTTTG 59.407 50.000 0.00 0.00 31.71 2.93
8701 13808 0.109597 GCCTTGCATCACTCGTTTGG 60.110 55.000 0.00 0.00 0.00 3.28
8702 13809 1.522668 CCTTGCATCACTCGTTTGGA 58.477 50.000 0.00 0.00 0.00 3.53
8703 13810 2.086869 CCTTGCATCACTCGTTTGGAT 58.913 47.619 0.00 0.00 0.00 3.41
8704 13811 3.270027 CCTTGCATCACTCGTTTGGATA 58.730 45.455 0.00 0.00 0.00 2.59
8705 13812 3.689161 CCTTGCATCACTCGTTTGGATAA 59.311 43.478 0.00 0.00 0.00 1.75
8706 13813 4.336433 CCTTGCATCACTCGTTTGGATAAT 59.664 41.667 0.00 0.00 0.00 1.28
8707 13814 5.163622 CCTTGCATCACTCGTTTGGATAATT 60.164 40.000 0.00 0.00 0.00 1.40
8708 13815 5.895636 TGCATCACTCGTTTGGATAATTT 57.104 34.783 0.00 0.00 0.00 1.82
8709 13816 6.266168 TGCATCACTCGTTTGGATAATTTT 57.734 33.333 0.00 0.00 0.00 1.82
8710 13817 6.686630 TGCATCACTCGTTTGGATAATTTTT 58.313 32.000 0.00 0.00 0.00 1.94
8749 13856 9.528489 TTACATTTCCTTATATTAGGCAATCCC 57.472 33.333 3.08 0.00 30.15 3.85
8750 13857 6.954102 ACATTTCCTTATATTAGGCAATCCCC 59.046 38.462 3.08 0.00 30.15 4.81
8751 13858 6.796867 TTTCCTTATATTAGGCAATCCCCT 57.203 37.500 2.71 0.00 39.05 4.79
8752 13859 6.388619 TTCCTTATATTAGGCAATCCCCTC 57.611 41.667 2.71 0.00 36.41 4.30
8753 13860 5.676125 TCCTTATATTAGGCAATCCCCTCT 58.324 41.667 2.71 0.00 36.41 3.69
8754 13861 6.822374 TCCTTATATTAGGCAATCCCCTCTA 58.178 40.000 2.71 0.00 36.41 2.43
8755 13862 7.439263 TCCTTATATTAGGCAATCCCCTCTAT 58.561 38.462 2.71 0.00 36.41 1.98
8756 13863 7.912204 TCCTTATATTAGGCAATCCCCTCTATT 59.088 37.037 2.71 0.00 36.41 1.73
8757 13864 8.560903 CCTTATATTAGGCAATCCCCTCTATTT 58.439 37.037 0.00 0.00 36.41 1.40
8758 13865 9.981460 CTTATATTAGGCAATCCCCTCTATTTT 57.019 33.333 0.00 0.00 36.41 1.82
8759 13866 9.975218 TTATATTAGGCAATCCCCTCTATTTTC 57.025 33.333 0.00 0.00 36.41 2.29
8760 13867 5.994416 TTAGGCAATCCCCTCTATTTTCT 57.006 39.130 0.00 0.00 36.41 2.52
8761 13868 4.445557 AGGCAATCCCCTCTATTTTCTC 57.554 45.455 0.00 0.00 0.00 2.87
8762 13869 3.788142 AGGCAATCCCCTCTATTTTCTCA 59.212 43.478 0.00 0.00 0.00 3.27
8763 13870 4.418190 AGGCAATCCCCTCTATTTTCTCAT 59.582 41.667 0.00 0.00 0.00 2.90
8764 13871 4.522022 GGCAATCCCCTCTATTTTCTCATG 59.478 45.833 0.00 0.00 0.00 3.07
8765 13872 5.136105 GCAATCCCCTCTATTTTCTCATGT 58.864 41.667 0.00 0.00 0.00 3.21
8766 13873 5.240403 GCAATCCCCTCTATTTTCTCATGTC 59.760 44.000 0.00 0.00 0.00 3.06
8767 13874 6.359804 CAATCCCCTCTATTTTCTCATGTCA 58.640 40.000 0.00 0.00 0.00 3.58
8768 13875 6.581388 ATCCCCTCTATTTTCTCATGTCAA 57.419 37.500 0.00 0.00 0.00 3.18
8769 13876 5.745227 TCCCCTCTATTTTCTCATGTCAAC 58.255 41.667 0.00 0.00 0.00 3.18
8770 13877 5.488919 TCCCCTCTATTTTCTCATGTCAACT 59.511 40.000 0.00 0.00 0.00 3.16
8771 13878 6.672218 TCCCCTCTATTTTCTCATGTCAACTA 59.328 38.462 0.00 0.00 0.00 2.24
8772 13879 6.989169 CCCCTCTATTTTCTCATGTCAACTAG 59.011 42.308 0.00 0.00 0.00 2.57
8773 13880 7.365117 CCCCTCTATTTTCTCATGTCAACTAGT 60.365 40.741 0.00 0.00 0.00 2.57
8774 13881 8.043710 CCCTCTATTTTCTCATGTCAACTAGTT 58.956 37.037 1.12 1.12 0.00 2.24
8778 13885 9.877178 CTATTTTCTCATGTCAACTAGTTAGGT 57.123 33.333 8.04 0.00 0.00 3.08
8779 13886 7.962964 TTTTCTCATGTCAACTAGTTAGGTG 57.037 36.000 8.04 5.58 42.33 4.00
8780 13887 6.665992 TTCTCATGTCAACTAGTTAGGTGT 57.334 37.500 8.04 0.00 41.68 4.16
8781 13888 7.770366 TTCTCATGTCAACTAGTTAGGTGTA 57.230 36.000 8.04 0.00 41.68 2.90
8782 13889 7.770366 TCTCATGTCAACTAGTTAGGTGTAA 57.230 36.000 8.04 0.00 41.68 2.41
8783 13890 8.362464 TCTCATGTCAACTAGTTAGGTGTAAT 57.638 34.615 8.04 0.00 41.68 1.89
8784 13891 8.467598 TCTCATGTCAACTAGTTAGGTGTAATC 58.532 37.037 8.04 0.00 41.68 1.75
8785 13892 8.362464 TCATGTCAACTAGTTAGGTGTAATCT 57.638 34.615 8.04 0.00 41.68 2.40
8786 13893 8.812972 TCATGTCAACTAGTTAGGTGTAATCTT 58.187 33.333 8.04 0.00 41.68 2.40
8789 13896 8.526147 TGTCAACTAGTTAGGTGTAATCTTACC 58.474 37.037 8.04 0.00 41.68 2.85
8790 13897 7.978414 GTCAACTAGTTAGGTGTAATCTTACCC 59.022 40.741 8.04 0.01 41.68 3.69
8791 13898 7.675195 TCAACTAGTTAGGTGTAATCTTACCCA 59.325 37.037 8.04 0.00 41.68 4.51
8792 13899 8.483758 CAACTAGTTAGGTGTAATCTTACCCAT 58.516 37.037 8.04 0.00 36.29 4.00
8793 13900 9.719433 AACTAGTTAGGTGTAATCTTACCCATA 57.281 33.333 6.26 0.00 37.70 2.74
8794 13901 9.719433 ACTAGTTAGGTGTAATCTTACCCATAA 57.281 33.333 0.00 0.20 37.70 1.90
8795 13902 9.978044 CTAGTTAGGTGTAATCTTACCCATAAC 57.022 37.037 10.23 10.23 37.70 1.89
8796 13903 8.619683 AGTTAGGTGTAATCTTACCCATAACT 57.380 34.615 13.27 13.27 37.70 2.24
8797 13904 9.054580 AGTTAGGTGTAATCTTACCCATAACTT 57.945 33.333 13.27 3.41 37.70 2.66
8798 13905 9.106070 GTTAGGTGTAATCTTACCCATAACTTG 57.894 37.037 10.69 0.00 37.70 3.16
8799 13906 7.266905 AGGTGTAATCTTACCCATAACTTGT 57.733 36.000 0.00 0.00 37.70 3.16
8800 13907 7.110155 AGGTGTAATCTTACCCATAACTTGTG 58.890 38.462 0.00 0.00 37.70 3.33
8801 13908 7.037873 AGGTGTAATCTTACCCATAACTTGTGA 60.038 37.037 0.00 0.00 37.70 3.58
8802 13909 7.608761 GGTGTAATCTTACCCATAACTTGTGAA 59.391 37.037 0.00 0.00 32.72 3.18
8803 13910 9.005777 GTGTAATCTTACCCATAACTTGTGAAA 57.994 33.333 0.00 0.00 32.72 2.69
8804 13911 9.747898 TGTAATCTTACCCATAACTTGTGAAAT 57.252 29.630 0.00 0.00 32.72 2.17
8809 13916 9.403583 TCTTACCCATAACTTGTGAAATTATCC 57.596 33.333 0.00 0.00 0.00 2.59
8810 13917 8.528044 TTACCCATAACTTGTGAAATTATCCC 57.472 34.615 0.00 0.00 0.00 3.85
8811 13918 6.741724 ACCCATAACTTGTGAAATTATCCCT 58.258 36.000 0.00 0.00 0.00 4.20
8812 13919 6.607198 ACCCATAACTTGTGAAATTATCCCTG 59.393 38.462 0.00 0.00 0.00 4.45
8813 13920 6.461509 CCCATAACTTGTGAAATTATCCCTGC 60.462 42.308 0.00 0.00 0.00 4.85
8814 13921 6.096705 CCATAACTTGTGAAATTATCCCTGCA 59.903 38.462 0.00 0.00 0.00 4.41
8815 13922 7.201938 CCATAACTTGTGAAATTATCCCTGCAT 60.202 37.037 0.00 0.00 0.00 3.96
8816 13923 5.587388 ACTTGTGAAATTATCCCTGCATG 57.413 39.130 0.00 0.00 0.00 4.06
8817 13924 5.018809 ACTTGTGAAATTATCCCTGCATGT 58.981 37.500 0.00 0.00 0.00 3.21
8818 13925 4.987408 TGTGAAATTATCCCTGCATGTG 57.013 40.909 0.00 0.00 0.00 3.21
8819 13926 4.343231 TGTGAAATTATCCCTGCATGTGT 58.657 39.130 0.00 0.00 0.00 3.72
8820 13927 4.158209 TGTGAAATTATCCCTGCATGTGTG 59.842 41.667 0.00 0.00 0.00 3.82
8821 13928 4.158394 GTGAAATTATCCCTGCATGTGTGT 59.842 41.667 0.00 0.00 0.00 3.72
8822 13929 4.771577 TGAAATTATCCCTGCATGTGTGTT 59.228 37.500 0.00 0.00 0.00 3.32
8823 13930 5.245751 TGAAATTATCCCTGCATGTGTGTTT 59.754 36.000 0.00 0.00 0.00 2.83
8825 13932 5.743636 ATTATCCCTGCATGTGTGTTTTT 57.256 34.783 0.00 0.00 0.00 1.94
8847 13954 5.923733 TTAATATCCGTGCCAAAAACCAT 57.076 34.783 0.00 0.00 0.00 3.55
8851 13958 1.609555 TCCGTGCCAAAAACCATACAC 59.390 47.619 0.00 0.00 0.00 2.90
8852 13959 1.336424 CCGTGCCAAAAACCATACACC 60.336 52.381 0.00 0.00 0.00 4.16
8853 13960 1.336424 CGTGCCAAAAACCATACACCC 60.336 52.381 0.00 0.00 0.00 4.61
8854 13961 1.967779 GTGCCAAAAACCATACACCCT 59.032 47.619 0.00 0.00 0.00 4.34
8856 13963 3.057104 GTGCCAAAAACCATACACCCTAC 60.057 47.826 0.00 0.00 0.00 3.18
8857 13964 3.158676 GCCAAAAACCATACACCCTACA 58.841 45.455 0.00 0.00 0.00 2.74
8858 13965 3.767131 GCCAAAAACCATACACCCTACAT 59.233 43.478 0.00 0.00 0.00 2.29
8859 13966 4.142249 GCCAAAAACCATACACCCTACATC 60.142 45.833 0.00 0.00 0.00 3.06
8860 13967 5.261216 CCAAAAACCATACACCCTACATCT 58.739 41.667 0.00 0.00 0.00 2.90
8861 13968 6.419791 CCAAAAACCATACACCCTACATCTA 58.580 40.000 0.00 0.00 0.00 1.98
8862 13969 6.542370 CCAAAAACCATACACCCTACATCTAG 59.458 42.308 0.00 0.00 0.00 2.43
8863 13970 5.888982 AAACCATACACCCTACATCTAGG 57.111 43.478 0.00 0.00 39.67 3.02
8864 13971 4.827036 ACCATACACCCTACATCTAGGA 57.173 45.455 0.00 0.00 42.34 2.94
8865 13972 5.355670 ACCATACACCCTACATCTAGGAT 57.644 43.478 0.00 0.00 42.34 3.24
8866 13973 5.334421 ACCATACACCCTACATCTAGGATC 58.666 45.833 0.00 0.00 42.34 3.36
8867 13974 4.399618 CCATACACCCTACATCTAGGATCG 59.600 50.000 0.00 0.00 42.34 3.69
8868 13975 2.877866 ACACCCTACATCTAGGATCGG 58.122 52.381 0.00 0.00 42.34 4.18
8869 13976 2.445905 ACACCCTACATCTAGGATCGGA 59.554 50.000 0.00 0.00 42.34 4.55
8870 13977 3.085533 CACCCTACATCTAGGATCGGAG 58.914 54.545 0.00 0.00 42.34 4.63
8871 13978 2.041891 ACCCTACATCTAGGATCGGAGG 59.958 54.545 0.00 0.00 42.34 4.30
8872 13979 2.621929 CCCTACATCTAGGATCGGAGGG 60.622 59.091 0.00 0.00 42.34 4.30
8873 13980 2.309162 CCTACATCTAGGATCGGAGGGA 59.691 54.545 0.00 0.00 42.34 4.20
8874 13981 2.595750 ACATCTAGGATCGGAGGGAG 57.404 55.000 0.00 0.00 0.00 4.30
8875 13982 1.783979 ACATCTAGGATCGGAGGGAGT 59.216 52.381 0.00 0.00 0.00 3.85
8876 13983 2.987437 ACATCTAGGATCGGAGGGAGTA 59.013 50.000 0.00 0.00 0.00 2.59
8877 13984 3.594232 ACATCTAGGATCGGAGGGAGTAT 59.406 47.826 0.00 0.00 0.00 2.12
8878 13985 4.789159 ACATCTAGGATCGGAGGGAGTATA 59.211 45.833 0.00 0.00 0.00 1.47
8879 13986 5.253330 ACATCTAGGATCGGAGGGAGTATAA 59.747 44.000 0.00 0.00 0.00 0.98
8880 13987 5.438698 TCTAGGATCGGAGGGAGTATAAG 57.561 47.826 0.00 0.00 0.00 1.73
8881 13988 5.099378 TCTAGGATCGGAGGGAGTATAAGA 58.901 45.833 0.00 0.00 0.00 2.10
8882 13989 4.310022 AGGATCGGAGGGAGTATAAGAG 57.690 50.000 0.00 0.00 0.00 2.85
8883 13990 3.658705 AGGATCGGAGGGAGTATAAGAGT 59.341 47.826 0.00 0.00 0.00 3.24
8884 13991 3.759618 GGATCGGAGGGAGTATAAGAGTG 59.240 52.174 0.00 0.00 0.00 3.51
8885 13992 3.947612 TCGGAGGGAGTATAAGAGTGT 57.052 47.619 0.00 0.00 0.00 3.55
8886 13993 4.246712 TCGGAGGGAGTATAAGAGTGTT 57.753 45.455 0.00 0.00 0.00 3.32
8887 13994 4.607239 TCGGAGGGAGTATAAGAGTGTTT 58.393 43.478 0.00 0.00 0.00 2.83
8888 13995 5.759059 TCGGAGGGAGTATAAGAGTGTTTA 58.241 41.667 0.00 0.00 0.00 2.01
8889 13996 5.826737 TCGGAGGGAGTATAAGAGTGTTTAG 59.173 44.000 0.00 0.00 0.00 1.85
8890 13997 5.826737 CGGAGGGAGTATAAGAGTGTTTAGA 59.173 44.000 0.00 0.00 0.00 2.10
8891 13998 6.490721 CGGAGGGAGTATAAGAGTGTTTAGAT 59.509 42.308 0.00 0.00 0.00 1.98
8892 13999 7.308710 CGGAGGGAGTATAAGAGTGTTTAGATC 60.309 44.444 0.00 0.00 0.00 2.75
8893 14000 7.506261 GGAGGGAGTATAAGAGTGTTTAGATCA 59.494 40.741 0.00 0.00 0.00 2.92
8894 14001 8.240267 AGGGAGTATAAGAGTGTTTAGATCAC 57.760 38.462 0.00 0.00 36.22 3.06
8895 14002 8.062536 AGGGAGTATAAGAGTGTTTAGATCACT 58.937 37.037 0.00 0.00 46.86 3.41
8896 14003 9.352191 GGGAGTATAAGAGTGTTTAGATCACTA 57.648 37.037 0.00 0.00 44.68 2.74
8936 14043 8.461249 ACGCTCTTATATTAGTTTACAGAGGA 57.539 34.615 0.00 0.00 0.00 3.71
8955 14062 7.126421 ACAGAGGAAGTACATGTTAATCTCCAT 59.874 37.037 2.30 0.00 0.00 3.41
8976 14083 1.599542 GCTTCTGAGCTTCGTTGTGTT 59.400 47.619 0.00 0.00 45.65 3.32
8977 14084 2.348966 GCTTCTGAGCTTCGTTGTGTTC 60.349 50.000 0.00 0.00 45.65 3.18
8993 14100 1.849692 TGTTCCCTATATTGGGCAGCA 59.150 47.619 16.71 11.85 46.67 4.41
9011 14118 1.467035 GCAGCTGCTTGAAGAATTCCG 60.467 52.381 31.33 0.00 40.58 4.30
9012 14119 1.808945 CAGCTGCTTGAAGAATTCCGT 59.191 47.619 0.00 0.00 46.93 4.69
9038 14145 0.753262 ATCTTCGAATCCCCTGACCG 59.247 55.000 0.00 0.00 0.00 4.79
9057 14164 6.976088 TGACCGAATCATTCTCTATCTCTTC 58.024 40.000 0.00 0.00 29.99 2.87
9125 14401 3.963428 AGCGAGAGAAACCAGTGTTAT 57.037 42.857 0.00 0.00 33.30 1.89
9126 14402 3.589988 AGCGAGAGAAACCAGTGTTATG 58.410 45.455 0.00 0.00 33.30 1.90
9137 14413 7.661847 AGAAACCAGTGTTATGAACTTAGGAAG 59.338 37.037 0.00 0.00 33.30 3.46
9138 14414 6.435292 ACCAGTGTTATGAACTTAGGAAGT 57.565 37.500 0.00 0.00 45.46 3.01
9139 14415 7.287810 AACCAGTGTTATGAACTTAGGAAGTT 58.712 34.615 4.31 4.31 42.90 2.66
9140 14416 7.778382 AACCAGTGTTATGAACTTAGGAAGTTT 59.222 33.333 6.09 0.00 41.46 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
143 444 4.891627 TCAAACATCAAACACGTGTGAT 57.108 36.364 24.16 18.30 34.78 3.06
297 602 5.038683 CGTACACTTATCTTACCATGCGAA 58.961 41.667 0.00 0.00 0.00 4.70
309 614 3.869246 CACCAACCATCCGTACACTTATC 59.131 47.826 0.00 0.00 0.00 1.75
314 619 1.674817 CCTCACCAACCATCCGTACAC 60.675 57.143 0.00 0.00 0.00 2.90
334 639 5.930135 TGGGGTGCTCTAAGATCTTATTTC 58.070 41.667 15.47 8.03 0.00 2.17
335 640 5.975988 TGGGGTGCTCTAAGATCTTATTT 57.024 39.130 15.47 0.00 0.00 1.40
341 646 2.050144 TGGATGGGGTGCTCTAAGATC 58.950 52.381 0.00 0.00 0.00 2.75
348 653 0.546122 TGTACATGGATGGGGTGCTC 59.454 55.000 0.00 0.00 0.00 4.26
398 703 3.243267 GCGAGTTGGTGGTTTTGTTACAT 60.243 43.478 0.00 0.00 0.00 2.29
419 725 9.875691 TTGTCATGGATAATAGATAGTGTATGC 57.124 33.333 0.00 0.00 0.00 3.14
496 806 4.926238 AGATCATCTTCGTTGTTCACTGAC 59.074 41.667 0.00 0.00 0.00 3.51
518 828 4.460731 TGATGCATCCTATTCCTAGACGAG 59.539 45.833 23.67 0.00 0.00 4.18
560 870 3.152341 CAAGAGCAACACCCTCTTCAAT 58.848 45.455 0.97 0.00 45.29 2.57
563 873 2.550830 TCAAGAGCAACACCCTCTTC 57.449 50.000 0.97 0.00 45.29 2.87
566 876 2.262423 ACTTCAAGAGCAACACCCTC 57.738 50.000 0.00 0.00 0.00 4.30
604 2741 0.527817 CGTGAAGGTAGACATCCCGC 60.528 60.000 0.00 0.00 0.00 6.13
705 2842 0.392998 GACACCGTGATTGGCATCCT 60.393 55.000 5.28 0.00 0.00 3.24
758 4946 7.148188 TGCATGGAATTTAGAAAAGAGCTACTG 60.148 37.037 0.00 0.00 0.00 2.74
791 4979 2.674852 CGAGCAGTACAAACAGATGCAT 59.325 45.455 0.00 0.00 39.34 3.96
808 4996 6.678878 TCCTTCAGATATTGTATACACGAGC 58.321 40.000 4.68 0.00 0.00 5.03
830 5018 1.807142 CCGCTTCAGAGAGGTTTTTCC 59.193 52.381 0.00 0.00 37.99 3.13
859 5047 5.310720 ACAAAGGGAGTATTGCGAAAATC 57.689 39.130 0.00 0.00 0.00 2.17
876 5066 2.162608 TCACCGTGTGTCCAAAACAAAG 59.837 45.455 0.00 0.00 40.31 2.77
922 5146 0.875059 CGTTTTGAGTGGGAAGAGCC 59.125 55.000 0.00 0.00 0.00 4.70
1189 5475 4.570874 GGCGAGGAGAATGGGGGC 62.571 72.222 0.00 0.00 0.00 5.80
1197 5487 4.388499 GTTTGCGGGGCGAGGAGA 62.388 66.667 0.00 0.00 0.00 3.71
1620 5910 2.031857 TGTTTTATGGCGTCGGTTGAAC 60.032 45.455 0.00 0.00 0.00 3.18
1735 6025 2.351738 CCAAGAAACCGTCAAATCAGCC 60.352 50.000 0.00 0.00 0.00 4.85
1906 6196 0.040958 CTTCAGCAGACACGGCAAAC 60.041 55.000 0.00 0.00 0.00 2.93
1964 6254 5.699458 GGTCCAAAGTCTCAACGAGAATAAA 59.301 40.000 0.00 0.00 40.59 1.40
1973 6263 2.814280 TCGAGGTCCAAAGTCTCAAC 57.186 50.000 0.00 0.00 0.00 3.18
2170 6460 5.815233 TTTCCAAGTTGGCATTATTTCCA 57.185 34.783 17.68 0.00 37.47 3.53
2230 6520 7.090953 TCCAAGTAAATAATTAAAGGGTGCG 57.909 36.000 0.00 0.00 0.00 5.34
2278 6568 3.260380 CAGAAACAGGACCATCTGACTCT 59.740 47.826 9.71 0.00 41.38 3.24
2341 6631 9.449550 GTCTGATAAGATATCTCATATGAAGCG 57.550 37.037 5.51 0.00 0.00 4.68
2407 6697 5.250543 TGATTCCTCTCCACCATAAACTTCA 59.749 40.000 0.00 0.00 0.00 3.02
2767 7057 0.096976 CCCAACGAACTAATGCAGCG 59.903 55.000 0.00 0.00 0.00 5.18
2809 7099 3.255642 GTGCCAAAGTGAGGAGCAAAATA 59.744 43.478 0.00 0.00 34.79 1.40
2910 7200 0.949397 CAGCAAAGCAGAGCACAGAA 59.051 50.000 0.00 0.00 0.00 3.02
2947 7237 6.238184 CCAAACTCTTTGATTTTTGAACAGCC 60.238 38.462 0.00 0.00 43.26 4.85
3002 7292 7.899973 ACTGATGAGCAAAGGATTTTAACAAT 58.100 30.769 0.00 0.00 35.03 2.71
3026 7316 9.807649 ATTACCATCTTGCTCATATTTGAAAAC 57.192 29.630 0.00 0.00 0.00 2.43
3070 7360 6.431198 TCTGTTAACACACTGAAGGTTTTC 57.569 37.500 3.59 0.00 0.00 2.29
3082 7372 7.120579 ACACACTTCAGAAATTCTGTTAACACA 59.879 33.333 20.91 0.00 44.58 3.72
3089 7379 4.137543 GGGACACACTTCAGAAATTCTGT 58.862 43.478 20.91 2.37 44.58 3.41
3109 7399 2.161410 CACGTCAAACACATGGTATGGG 59.839 50.000 0.00 0.00 40.30 4.00
3117 7407 1.529438 CTAACGCCACGTCAAACACAT 59.471 47.619 0.00 0.00 39.99 3.21
3124 7414 1.372499 GCACTCTAACGCCACGTCA 60.372 57.895 0.00 0.00 39.99 4.35
3139 7429 1.742880 TGAGCTGAAGATGCCGCAC 60.743 57.895 0.00 0.00 0.00 5.34
3229 7519 5.874093 AGTGATGAACAGTCTCCATTTTCT 58.126 37.500 0.00 0.00 0.00 2.52
3341 7631 5.503662 TGATTGACCATGATGTATTGCAC 57.496 39.130 0.00 0.00 0.00 4.57
3343 7633 8.047413 TCATATGATTGACCATGATGTATTGC 57.953 34.615 0.00 0.00 0.00 3.56
3407 7697 4.916983 TCACCAATTCAAACACCTTCAG 57.083 40.909 0.00 0.00 0.00 3.02
3508 7798 5.349270 CACATTATGCCAAAGAACATTGTGG 59.651 40.000 0.00 0.00 33.99 4.17
3513 7803 4.021280 TGCACACATTATGCCAAAGAACAT 60.021 37.500 0.00 0.00 42.69 2.71
3527 7817 1.497278 GCATCGACGTGCACACATT 59.503 52.632 18.64 0.00 44.43 2.71
3528 7818 3.168271 GCATCGACGTGCACACAT 58.832 55.556 18.64 0.56 44.43 3.21
3541 7831 3.665409 CACGCGATTCCAATAATTGCATC 59.335 43.478 15.93 2.40 36.97 3.91
3877 8167 6.783892 GAAATACTTGCTTGCAATTTCCAA 57.216 33.333 16.04 0.90 32.79 3.53
3880 8170 5.237048 TGGGAAATACTTGCTTGCAATTTC 58.763 37.500 17.54 17.54 36.35 2.17
3882 8172 4.888326 TGGGAAATACTTGCTTGCAATT 57.112 36.364 8.55 6.00 0.00 2.32
4144 8434 9.261035 AGAGAAGGAGAACTATTCATAAACTCA 57.739 33.333 0.00 0.00 0.00 3.41
4247 8537 4.150359 TCCCAGAACGTTCTAGAACTTCT 58.850 43.478 29.28 27.64 38.29 2.85
4252 8542 2.492484 GCTCTCCCAGAACGTTCTAGAA 59.508 50.000 29.28 16.09 35.34 2.10
4276 8566 2.682856 GGTGGCACGAATACAACATGAT 59.317 45.455 12.17 0.00 0.00 2.45
4280 8570 2.264005 AAGGTGGCACGAATACAACA 57.736 45.000 12.17 0.00 0.00 3.33
4333 8623 5.786401 ACCTCGAAGAAAATTTCTCATCG 57.214 39.130 18.49 18.49 39.61 3.84
4343 8633 5.588648 CCTGGCAATTATACCTCGAAGAAAA 59.411 40.000 0.00 0.00 34.09 2.29
4461 8751 2.319844 CAGAAGGTTCTTTTTGCCCCT 58.680 47.619 0.00 0.00 34.74 4.79
4488 8778 1.156736 GCACACTACGTTGCTTGGAT 58.843 50.000 0.00 0.00 0.00 3.41
4555 8845 1.480954 TCCTTCTGGTATCCGTTGCTC 59.519 52.381 0.00 0.00 34.23 4.26
4576 8866 2.582052 ACCTTGGCACGATGAAAAAGA 58.418 42.857 0.00 0.00 0.00 2.52
4630 8920 4.389374 CAGTATCACCACTGGACAACTTT 58.611 43.478 0.71 0.00 41.88 2.66
4641 8931 1.089920 CAAGCTGGCAGTATCACCAC 58.910 55.000 17.16 0.00 0.00 4.16
4825 9115 3.444034 CAGGAGTAATCTGACGACCTTCA 59.556 47.826 0.00 0.00 34.36 3.02
4994 9327 7.160726 GGTTTCCAATCTGAATGATTCCAAAA 58.839 34.615 2.26 0.00 43.00 2.44
5188 9521 1.003116 GCTGATTCCATAGCTGTTGCG 60.003 52.381 0.00 0.00 45.42 4.85
5266 9599 5.321516 GGAAACAAAACCTCATTCGTATCG 58.678 41.667 0.00 0.00 0.00 2.92
5337 9670 3.989817 GGTTTGCTTAGCTTGGTGAAATG 59.010 43.478 5.60 0.00 0.00 2.32
5463 9796 1.271434 GGAGGGACTTCACTGGTTTCC 60.271 57.143 0.00 0.00 41.55 3.13
5500 9833 7.603404 TCCTTGCCATAAATGAATTCAAACAAG 59.397 33.333 13.09 15.64 0.00 3.16
5503 9836 7.466320 GCATCCTTGCCATAAATGAATTCAAAC 60.466 37.037 13.09 0.00 43.38 2.93
5529 9862 2.093500 TCACCTGATCCATCTTTCACGG 60.093 50.000 0.00 0.00 0.00 4.94
5531 9864 3.314635 GCATCACCTGATCCATCTTTCAC 59.685 47.826 0.00 0.00 31.21 3.18
5586 9919 3.834610 CAGAGTACAGGTAACAACCTCG 58.165 50.000 0.00 0.00 38.22 4.63
5767 10100 9.971922 AAGAGGAAATTCAAAATTACTTGAGTG 57.028 29.630 0.00 0.00 36.69 3.51
6043 10376 3.195698 GCGGACATCAGCGGAACC 61.196 66.667 0.00 0.00 0.00 3.62
6182 10515 6.039270 TCCCGTGGAAAATGATATTTTGCTAG 59.961 38.462 15.95 10.99 32.11 3.42
6324 10657 5.487488 TCTTCCTTAGCAATAGGAGGACAAA 59.513 40.000 8.79 0.00 41.41 2.83
6616 10949 7.814107 TGTGCAAGATCAACAAATTCTAATTCC 59.186 33.333 0.00 0.00 0.00 3.01
6804 11137 6.049149 CGTATGTGGTTCATAGTGGAATCTT 58.951 40.000 0.00 0.00 39.36 2.40
6858 11191 4.211374 ACATACGAAGCAAAGTGAGTGAAC 59.789 41.667 0.00 0.00 0.00 3.18
6867 11200 3.508762 ACGGACTACATACGAAGCAAAG 58.491 45.455 0.00 0.00 0.00 2.77
6874 11207 6.441093 AATTTCACTACGGACTACATACGA 57.559 37.500 0.00 0.00 0.00 3.43
6876 11209 9.230932 GTAGAAATTTCACTACGGACTACATAC 57.769 37.037 19.99 5.11 31.54 2.39
6882 11215 7.384387 GTCTTTGTAGAAATTTCACTACGGACT 59.616 37.037 19.99 0.00 40.98 3.85
7051 11534 9.726438 ACACATAGCAACTTAGAAAGACTTAAT 57.274 29.630 0.00 0.00 0.00 1.40
7083 11566 3.708121 AGATGTACAGATGACATGAGGCA 59.292 43.478 0.00 0.00 37.65 4.75
7084 11567 4.202192 TGAGATGTACAGATGACATGAGGC 60.202 45.833 0.00 0.00 37.65 4.70
7086 11569 6.073711 GCAATGAGATGTACAGATGACATGAG 60.074 42.308 0.00 2.00 37.65 2.90
7088 11571 5.526111 TGCAATGAGATGTACAGATGACATG 59.474 40.000 0.33 0.00 37.65 3.21
7089 11572 5.677567 TGCAATGAGATGTACAGATGACAT 58.322 37.500 0.33 0.34 40.25 3.06
7090 11573 5.088680 TGCAATGAGATGTACAGATGACA 57.911 39.130 0.33 0.00 0.00 3.58
7091 11574 6.426980 TTTGCAATGAGATGTACAGATGAC 57.573 37.500 0.00 0.00 0.00 3.06
7094 11577 7.415989 GGTGAATTTGCAATGAGATGTACAGAT 60.416 37.037 0.00 0.00 0.00 2.90
7095 11578 6.127925 GGTGAATTTGCAATGAGATGTACAGA 60.128 38.462 0.00 0.00 0.00 3.41
7096 11579 6.032094 GGTGAATTTGCAATGAGATGTACAG 58.968 40.000 0.00 0.00 0.00 2.74
7097 11580 5.476254 TGGTGAATTTGCAATGAGATGTACA 59.524 36.000 0.00 0.00 0.00 2.90
7165 11648 3.750501 ACCCCGTTAAATCATTCCCTT 57.249 42.857 0.00 0.00 0.00 3.95
7177 11660 8.099537 TGTTTGTAAATGAAGTATACCCCGTTA 58.900 33.333 0.00 0.00 0.00 3.18
7231 11915 7.470289 AATAAGATTGAAGTCGATACTGCAC 57.530 36.000 0.00 0.00 41.26 4.57
7240 11924 9.708222 CACCTCAAATTAATAAGATTGAAGTCG 57.292 33.333 2.77 0.00 31.94 4.18
7384 12068 8.682710 TCACTCAGCACTAAATTTGTTTAACTT 58.317 29.630 0.00 0.00 0.00 2.66
7422 12106 4.398358 TCACATACTCCACAGCAGTACTAC 59.602 45.833 0.00 0.00 0.00 2.73
7515 12208 1.761198 CAGAGATGTCTGGCAGGATCA 59.239 52.381 21.82 16.10 45.85 2.92
7603 12296 7.933396 TGTATCATGGCATGTAGAATTTTCAG 58.067 34.615 25.62 0.00 0.00 3.02
7686 12388 4.020218 CACTTGATCCTGGAAAGAGTACCA 60.020 45.833 13.68 0.00 34.81 3.25
7926 12628 9.869757 GCCAGAAACCACATTTTAAAATAGTAT 57.130 29.630 12.98 4.19 0.00 2.12
8139 13009 6.668541 ACAATCTACACACTGATTACATGC 57.331 37.500 0.00 0.00 32.37 4.06
8172 13042 5.876357 ACCATAGCAAAAGACTTTACCAGA 58.124 37.500 0.00 0.00 0.00 3.86
8244 13127 2.358267 AGATTAAACTCGGAGCGATCGT 59.642 45.455 17.81 3.24 34.61 3.73
8246 13129 2.473235 GCAGATTAAACTCGGAGCGATC 59.527 50.000 4.58 0.00 34.61 3.69
8247 13130 2.101582 AGCAGATTAAACTCGGAGCGAT 59.898 45.455 4.58 0.00 34.61 4.58
8248 13131 1.476891 AGCAGATTAAACTCGGAGCGA 59.523 47.619 4.58 0.00 0.00 4.93
8249 13132 1.590238 CAGCAGATTAAACTCGGAGCG 59.410 52.381 4.58 0.00 0.00 5.03
8250 13133 1.328986 GCAGCAGATTAAACTCGGAGC 59.671 52.381 4.58 0.00 0.00 4.70
8251 13134 2.898705 AGCAGCAGATTAAACTCGGAG 58.101 47.619 2.83 2.83 0.00 4.63
8252 13135 4.371786 CATAGCAGCAGATTAAACTCGGA 58.628 43.478 0.00 0.00 0.00 4.55
8253 13136 3.496130 CCATAGCAGCAGATTAAACTCGG 59.504 47.826 0.00 0.00 0.00 4.63
8254 13137 4.122776 ACCATAGCAGCAGATTAAACTCG 58.877 43.478 0.00 0.00 0.00 4.18
8300 13381 6.402118 GCATGAACGTTATGTGACATGTTAGT 60.402 38.462 20.09 0.41 42.71 2.24
8369 13476 6.403636 CGGGTTGAAATCCTTGATAGAGTTTG 60.404 42.308 0.00 0.00 0.00 2.93
8384 13491 2.154462 CTGTTCAGAGCGGGTTGAAAT 58.846 47.619 6.44 0.00 35.29 2.17
8389 13496 2.750350 CCCTGTTCAGAGCGGGTT 59.250 61.111 11.04 0.00 31.89 4.11
8395 13502 1.002544 GAGGTTGGACCCTGTTCAGAG 59.997 57.143 1.00 0.00 39.75 3.35
8418 13525 3.447586 ACGATCTTGCCCTATATATGCGT 59.552 43.478 0.00 0.00 0.00 5.24
8420 13527 6.109359 AGAAACGATCTTGCCCTATATATGC 58.891 40.000 0.00 0.00 33.39 3.14
8425 13532 5.304357 TGATGAGAAACGATCTTGCCCTATA 59.696 40.000 0.00 0.00 38.96 1.31
8455 13562 9.308000 ACAAGACATGTTCCCTTCATTTATTTA 57.692 29.630 0.00 0.00 40.06 1.40
8456 13563 8.193953 ACAAGACATGTTCCCTTCATTTATTT 57.806 30.769 0.00 0.00 40.06 1.40
8457 13564 7.781324 ACAAGACATGTTCCCTTCATTTATT 57.219 32.000 0.00 0.00 40.06 1.40
8458 13565 9.125026 GATACAAGACATGTTCCCTTCATTTAT 57.875 33.333 0.00 0.00 43.63 1.40
8459 13566 8.106462 TGATACAAGACATGTTCCCTTCATTTA 58.894 33.333 0.00 0.00 43.63 1.40
8460 13567 6.947733 TGATACAAGACATGTTCCCTTCATTT 59.052 34.615 0.00 0.00 43.63 2.32
8461 13568 6.484288 TGATACAAGACATGTTCCCTTCATT 58.516 36.000 0.00 0.00 43.63 2.57
8462 13569 6.065976 TGATACAAGACATGTTCCCTTCAT 57.934 37.500 0.00 0.00 43.63 2.57
8463 13570 5.497464 TGATACAAGACATGTTCCCTTCA 57.503 39.130 0.00 0.00 43.63 3.02
8464 13571 6.817765 TTTGATACAAGACATGTTCCCTTC 57.182 37.500 0.00 0.00 43.63 3.46
8465 13572 7.121759 CAGATTTGATACAAGACATGTTCCCTT 59.878 37.037 0.00 0.00 43.63 3.95
8466 13573 6.600822 CAGATTTGATACAAGACATGTTCCCT 59.399 38.462 0.00 0.00 43.63 4.20
8475 13582 3.063997 CCGTGCCAGATTTGATACAAGAC 59.936 47.826 0.00 0.00 0.00 3.01
8506 13613 1.737236 TCAGATCAAATGCGTTTCCCG 59.263 47.619 0.00 0.00 40.40 5.14
8507 13614 3.699067 CATCAGATCAAATGCGTTTCCC 58.301 45.455 0.00 0.00 0.00 3.97
8508 13615 3.111098 GCATCAGATCAAATGCGTTTCC 58.889 45.455 14.25 0.00 38.95 3.13
8519 13626 5.067954 CCACCAAATATCAGCATCAGATCA 58.932 41.667 0.00 0.00 0.00 2.92
8528 13635 1.473258 TGTGCCCACCAAATATCAGC 58.527 50.000 0.00 0.00 0.00 4.26
8540 13647 0.483770 ATCCATATGCCATGTGCCCA 59.516 50.000 0.00 0.00 40.16 5.36
8564 13671 1.469126 CTGCGCGACGTGGTATACAC 61.469 60.000 12.10 0.68 46.78 2.90
8592 13699 2.112087 TTTACGGTGGCAGCAGCA 59.888 55.556 17.80 0.00 44.61 4.41
8593 13700 0.672401 TAGTTTACGGTGGCAGCAGC 60.672 55.000 17.80 0.00 41.10 5.25
8594 13701 1.803334 TTAGTTTACGGTGGCAGCAG 58.197 50.000 17.80 11.74 0.00 4.24
8595 13702 2.483014 ATTAGTTTACGGTGGCAGCA 57.517 45.000 17.80 0.00 0.00 4.41
8596 13703 3.528532 AGTATTAGTTTACGGTGGCAGC 58.471 45.455 6.62 6.62 0.00 5.25
8597 13704 4.117685 GGAGTATTAGTTTACGGTGGCAG 58.882 47.826 0.00 0.00 0.00 4.85
8598 13705 3.118665 GGGAGTATTAGTTTACGGTGGCA 60.119 47.826 0.00 0.00 0.00 4.92
8600 13707 4.202192 GGAGGGAGTATTAGTTTACGGTGG 60.202 50.000 0.00 0.00 0.00 4.61
8601 13708 4.498682 CGGAGGGAGTATTAGTTTACGGTG 60.499 50.000 0.00 0.00 0.00 4.94
8602 13709 3.633986 CGGAGGGAGTATTAGTTTACGGT 59.366 47.826 0.00 0.00 0.00 4.83
8603 13710 3.633986 ACGGAGGGAGTATTAGTTTACGG 59.366 47.826 0.00 0.00 0.00 4.02
8604 13711 4.907879 ACGGAGGGAGTATTAGTTTACG 57.092 45.455 0.00 0.00 0.00 3.18
8605 13712 5.362143 AGGAACGGAGGGAGTATTAGTTTAC 59.638 44.000 0.00 0.00 0.00 2.01
8606 13713 5.522641 AGGAACGGAGGGAGTATTAGTTTA 58.477 41.667 0.00 0.00 0.00 2.01
8607 13714 4.359996 AGGAACGGAGGGAGTATTAGTTT 58.640 43.478 0.00 0.00 0.00 2.66
8608 13715 3.991683 AGGAACGGAGGGAGTATTAGTT 58.008 45.455 0.00 0.00 0.00 2.24
8609 13716 3.684408 AGGAACGGAGGGAGTATTAGT 57.316 47.619 0.00 0.00 0.00 2.24
8610 13717 3.958798 TCAAGGAACGGAGGGAGTATTAG 59.041 47.826 0.00 0.00 0.00 1.73
8611 13718 3.985127 TCAAGGAACGGAGGGAGTATTA 58.015 45.455 0.00 0.00 0.00 0.98
8612 13719 2.829023 TCAAGGAACGGAGGGAGTATT 58.171 47.619 0.00 0.00 0.00 1.89
8613 13720 2.544844 TCAAGGAACGGAGGGAGTAT 57.455 50.000 0.00 0.00 0.00 2.12
8652 13759 9.238368 ACACCTTATATTTCGGAATTTTTCTCA 57.762 29.630 0.00 0.00 0.00 3.27
8657 13764 9.744468 GCAATACACCTTATATTTCGGAATTTT 57.256 29.630 0.00 0.00 0.00 1.82
8658 13765 8.357402 GGCAATACACCTTATATTTCGGAATTT 58.643 33.333 0.00 0.00 0.00 1.82
8659 13766 7.724061 AGGCAATACACCTTATATTTCGGAATT 59.276 33.333 0.00 0.00 31.87 2.17
8660 13767 7.231467 AGGCAATACACCTTATATTTCGGAAT 58.769 34.615 0.00 0.00 31.87 3.01
8661 13768 6.597562 AGGCAATACACCTTATATTTCGGAA 58.402 36.000 0.00 0.00 31.87 4.30
8662 13769 6.182507 AGGCAATACACCTTATATTTCGGA 57.817 37.500 0.00 0.00 31.87 4.55
8663 13770 6.668323 CAAGGCAATACACCTTATATTTCGG 58.332 40.000 0.00 0.00 45.90 4.30
8664 13771 6.142817 GCAAGGCAATACACCTTATATTTCG 58.857 40.000 0.00 0.00 45.90 3.46
8665 13772 7.038154 TGCAAGGCAATACACCTTATATTTC 57.962 36.000 0.00 0.00 45.90 2.17
8666 13773 7.287466 TGATGCAAGGCAATACACCTTATATTT 59.713 33.333 0.00 0.00 45.90 1.40
8667 13774 6.777091 TGATGCAAGGCAATACACCTTATATT 59.223 34.615 0.00 0.00 45.90 1.28
8668 13775 6.207417 GTGATGCAAGGCAATACACCTTATAT 59.793 38.462 0.00 0.00 45.90 0.86
8669 13776 5.530915 GTGATGCAAGGCAATACACCTTATA 59.469 40.000 0.00 0.00 45.90 0.98
8670 13777 4.339247 GTGATGCAAGGCAATACACCTTAT 59.661 41.667 0.00 0.00 45.90 1.73
8671 13778 3.694072 GTGATGCAAGGCAATACACCTTA 59.306 43.478 0.00 0.00 45.90 2.69
8673 13780 2.094675 GTGATGCAAGGCAATACACCT 58.905 47.619 0.00 0.00 43.62 4.00
8674 13781 2.094675 AGTGATGCAAGGCAATACACC 58.905 47.619 16.50 0.00 43.62 4.16
8675 13782 2.223112 CGAGTGATGCAAGGCAATACAC 60.223 50.000 14.06 14.06 43.62 2.90
8676 13783 2.009051 CGAGTGATGCAAGGCAATACA 58.991 47.619 0.00 0.00 43.62 2.29
8677 13784 2.009774 ACGAGTGATGCAAGGCAATAC 58.990 47.619 0.00 0.00 43.62 1.89
8678 13785 2.401583 ACGAGTGATGCAAGGCAATA 57.598 45.000 0.00 0.00 43.62 1.90
8679 13786 1.538047 AACGAGTGATGCAAGGCAAT 58.462 45.000 0.00 0.00 43.62 3.56
8680 13787 1.001487 CAAACGAGTGATGCAAGGCAA 60.001 47.619 0.00 0.00 43.62 4.52
8681 13788 0.592637 CAAACGAGTGATGCAAGGCA 59.407 50.000 0.00 0.00 44.86 4.75
8682 13789 0.109597 CCAAACGAGTGATGCAAGGC 60.110 55.000 0.00 0.00 0.00 4.35
8683 13790 1.522668 TCCAAACGAGTGATGCAAGG 58.477 50.000 0.00 0.00 0.00 3.61
8684 13791 4.944962 TTATCCAAACGAGTGATGCAAG 57.055 40.909 0.00 0.00 0.00 4.01
8685 13792 5.895636 AATTATCCAAACGAGTGATGCAA 57.104 34.783 0.00 0.00 0.00 4.08
8686 13793 5.895636 AAATTATCCAAACGAGTGATGCA 57.104 34.783 0.00 0.00 0.00 3.96
8723 13830 9.528489 GGGATTGCCTAATATAAGGAAATGTAA 57.472 33.333 1.83 0.00 43.86 2.41
8724 13831 8.113462 GGGGATTGCCTAATATAAGGAAATGTA 58.887 37.037 1.83 0.00 43.86 2.29
8725 13832 6.954102 GGGGATTGCCTAATATAAGGAAATGT 59.046 38.462 1.83 0.00 43.86 2.71
8726 13833 7.184862 AGGGGATTGCCTAATATAAGGAAATG 58.815 38.462 1.83 0.00 43.86 2.32
8727 13834 7.242740 AGAGGGGATTGCCTAATATAAGGAAAT 59.757 37.037 0.00 0.00 46.11 2.17
8728 13835 6.566480 AGAGGGGATTGCCTAATATAAGGAAA 59.434 38.462 0.00 0.00 38.61 3.13
8729 13836 6.098446 AGAGGGGATTGCCTAATATAAGGAA 58.902 40.000 0.00 0.00 39.15 3.36
8730 13837 5.676125 AGAGGGGATTGCCTAATATAAGGA 58.324 41.667 0.00 0.00 39.15 3.36
8731 13838 7.698163 ATAGAGGGGATTGCCTAATATAAGG 57.302 40.000 0.00 0.00 39.87 2.69
8732 13839 9.981460 AAAATAGAGGGGATTGCCTAATATAAG 57.019 33.333 0.00 0.00 0.00 1.73
8733 13840 9.975218 GAAAATAGAGGGGATTGCCTAATATAA 57.025 33.333 0.00 0.00 0.00 0.98
8734 13841 9.351572 AGAAAATAGAGGGGATTGCCTAATATA 57.648 33.333 0.00 0.00 0.00 0.86
8735 13842 8.237109 AGAAAATAGAGGGGATTGCCTAATAT 57.763 34.615 0.00 0.00 0.00 1.28
8736 13843 7.294720 TGAGAAAATAGAGGGGATTGCCTAATA 59.705 37.037 0.00 0.00 0.00 0.98
8737 13844 6.103205 TGAGAAAATAGAGGGGATTGCCTAAT 59.897 38.462 0.00 0.00 0.00 1.73
8738 13845 5.431731 TGAGAAAATAGAGGGGATTGCCTAA 59.568 40.000 0.00 0.00 0.00 2.69
8739 13846 4.975147 TGAGAAAATAGAGGGGATTGCCTA 59.025 41.667 0.00 0.00 0.00 3.93
8740 13847 3.788142 TGAGAAAATAGAGGGGATTGCCT 59.212 43.478 0.00 0.00 0.00 4.75
8741 13848 4.170468 TGAGAAAATAGAGGGGATTGCC 57.830 45.455 0.00 0.00 0.00 4.52
8742 13849 5.136105 ACATGAGAAAATAGAGGGGATTGC 58.864 41.667 0.00 0.00 0.00 3.56
8743 13850 6.359804 TGACATGAGAAAATAGAGGGGATTG 58.640 40.000 0.00 0.00 0.00 2.67
8744 13851 6.581388 TGACATGAGAAAATAGAGGGGATT 57.419 37.500 0.00 0.00 0.00 3.01
8745 13852 6.159398 AGTTGACATGAGAAAATAGAGGGGAT 59.841 38.462 0.00 0.00 0.00 3.85
8746 13853 5.488919 AGTTGACATGAGAAAATAGAGGGGA 59.511 40.000 0.00 0.00 0.00 4.81
8747 13854 5.749462 AGTTGACATGAGAAAATAGAGGGG 58.251 41.667 0.00 0.00 0.00 4.79
8748 13855 7.560368 ACTAGTTGACATGAGAAAATAGAGGG 58.440 38.462 15.69 0.00 0.00 4.30
8752 13859 9.877178 ACCTAACTAGTTGACATGAGAAAATAG 57.123 33.333 18.56 6.25 0.00 1.73
8753 13860 9.653287 CACCTAACTAGTTGACATGAGAAAATA 57.347 33.333 18.56 0.00 0.00 1.40
8754 13861 8.157476 ACACCTAACTAGTTGACATGAGAAAAT 58.843 33.333 18.56 0.00 0.00 1.82
8755 13862 7.506114 ACACCTAACTAGTTGACATGAGAAAA 58.494 34.615 18.56 0.00 0.00 2.29
8756 13863 7.062749 ACACCTAACTAGTTGACATGAGAAA 57.937 36.000 18.56 0.00 0.00 2.52
8757 13864 6.665992 ACACCTAACTAGTTGACATGAGAA 57.334 37.500 18.56 0.00 0.00 2.87
8758 13865 7.770366 TTACACCTAACTAGTTGACATGAGA 57.230 36.000 18.56 0.00 0.00 3.27
8759 13866 8.470805 AGATTACACCTAACTAGTTGACATGAG 58.529 37.037 18.56 6.14 0.00 2.90
8760 13867 8.362464 AGATTACACCTAACTAGTTGACATGA 57.638 34.615 18.56 0.00 0.00 3.07
8763 13870 8.526147 GGTAAGATTACACCTAACTAGTTGACA 58.474 37.037 18.56 0.00 35.37 3.58
8764 13871 7.978414 GGGTAAGATTACACCTAACTAGTTGAC 59.022 40.741 18.56 0.00 35.37 3.18
8765 13872 7.675195 TGGGTAAGATTACACCTAACTAGTTGA 59.325 37.037 18.56 1.90 36.22 3.18
8766 13873 7.844009 TGGGTAAGATTACACCTAACTAGTTG 58.156 38.462 18.56 4.51 36.22 3.16
8767 13874 8.619683 ATGGGTAAGATTACACCTAACTAGTT 57.380 34.615 13.68 13.68 36.22 2.24
8768 13875 9.719433 TTATGGGTAAGATTACACCTAACTAGT 57.281 33.333 2.65 0.00 36.22 2.57
8769 13876 9.978044 GTTATGGGTAAGATTACACCTAACTAG 57.022 37.037 18.30 0.00 41.18 2.57
8770 13877 9.719433 AGTTATGGGTAAGATTACACCTAACTA 57.281 33.333 23.08 0.19 46.79 2.24
8771 13878 8.619683 AGTTATGGGTAAGATTACACCTAACT 57.380 34.615 20.70 20.70 45.37 2.24
8772 13879 9.106070 CAAGTTATGGGTAAGATTACACCTAAC 57.894 37.037 18.07 18.07 42.96 2.34
8773 13880 8.828751 ACAAGTTATGGGTAAGATTACACCTAA 58.171 33.333 2.65 1.37 36.22 2.69
8774 13881 8.262227 CACAAGTTATGGGTAAGATTACACCTA 58.738 37.037 2.65 0.00 36.22 3.08
8775 13882 7.037873 TCACAAGTTATGGGTAAGATTACACCT 60.038 37.037 2.65 0.00 36.22 4.00
8776 13883 7.107542 TCACAAGTTATGGGTAAGATTACACC 58.892 38.462 2.65 3.61 36.22 4.16
8777 13884 8.556213 TTCACAAGTTATGGGTAAGATTACAC 57.444 34.615 5.19 1.69 37.57 2.90
8778 13885 9.747898 ATTTCACAAGTTATGGGTAAGATTACA 57.252 29.630 5.19 0.00 35.37 2.41
8783 13890 9.403583 GGATAATTTCACAAGTTATGGGTAAGA 57.596 33.333 0.00 0.00 32.72 2.10
8784 13891 8.630037 GGGATAATTTCACAAGTTATGGGTAAG 58.370 37.037 0.00 0.00 32.72 2.34
8785 13892 8.340757 AGGGATAATTTCACAAGTTATGGGTAA 58.659 33.333 0.00 0.00 32.72 2.85
8786 13893 7.777910 CAGGGATAATTTCACAAGTTATGGGTA 59.222 37.037 0.00 0.00 32.72 3.69
8787 13894 6.607198 CAGGGATAATTTCACAAGTTATGGGT 59.393 38.462 0.00 0.00 32.72 4.51
8788 13895 6.461509 GCAGGGATAATTTCACAAGTTATGGG 60.462 42.308 0.00 0.00 0.00 4.00
8789 13896 6.096705 TGCAGGGATAATTTCACAAGTTATGG 59.903 38.462 0.00 0.00 0.00 2.74
8790 13897 7.099266 TGCAGGGATAATTTCACAAGTTATG 57.901 36.000 0.00 0.00 0.00 1.90
8791 13898 7.342799 ACATGCAGGGATAATTTCACAAGTTAT 59.657 33.333 2.31 0.00 0.00 1.89
8792 13899 6.663093 ACATGCAGGGATAATTTCACAAGTTA 59.337 34.615 2.31 0.00 0.00 2.24
8793 13900 5.481473 ACATGCAGGGATAATTTCACAAGTT 59.519 36.000 2.31 0.00 0.00 2.66
8794 13901 5.018809 ACATGCAGGGATAATTTCACAAGT 58.981 37.500 2.31 0.00 0.00 3.16
8795 13902 5.105635 ACACATGCAGGGATAATTTCACAAG 60.106 40.000 2.31 0.00 0.00 3.16
8796 13903 4.771577 ACACATGCAGGGATAATTTCACAA 59.228 37.500 2.31 0.00 0.00 3.33
8797 13904 4.158209 CACACATGCAGGGATAATTTCACA 59.842 41.667 2.31 0.00 0.00 3.58
8798 13905 4.158394 ACACACATGCAGGGATAATTTCAC 59.842 41.667 2.31 0.00 0.00 3.18
8799 13906 4.343231 ACACACATGCAGGGATAATTTCA 58.657 39.130 2.31 0.00 0.00 2.69
8800 13907 4.989279 ACACACATGCAGGGATAATTTC 57.011 40.909 2.31 0.00 0.00 2.17
8801 13908 5.743636 AAACACACATGCAGGGATAATTT 57.256 34.783 2.31 0.00 0.00 1.82
8802 13909 5.743636 AAAACACACATGCAGGGATAATT 57.256 34.783 2.31 0.00 0.00 1.40
8803 13910 5.743636 AAAAACACACATGCAGGGATAAT 57.256 34.783 2.31 0.00 0.00 1.28
8822 13929 6.522054 TGGTTTTTGGCACGGATATTAAAAA 58.478 32.000 0.00 0.00 0.00 1.94
8823 13930 6.097915 TGGTTTTTGGCACGGATATTAAAA 57.902 33.333 0.00 0.00 0.00 1.52
8825 13932 5.923733 ATGGTTTTTGGCACGGATATTAA 57.076 34.783 0.00 0.00 0.00 1.40
8828 13935 4.097286 GTGTATGGTTTTTGGCACGGATAT 59.903 41.667 0.00 0.00 0.00 1.63
8834 13941 1.967779 AGGGTGTATGGTTTTTGGCAC 59.032 47.619 0.00 0.00 0.00 5.01
8837 13944 5.261216 AGATGTAGGGTGTATGGTTTTTGG 58.739 41.667 0.00 0.00 0.00 3.28
8841 13948 5.535029 TCCTAGATGTAGGGTGTATGGTTT 58.465 41.667 15.61 0.00 45.65 3.27
8845 13952 4.399618 CCGATCCTAGATGTAGGGTGTATG 59.600 50.000 15.61 0.00 45.65 2.39
8847 13954 3.654321 TCCGATCCTAGATGTAGGGTGTA 59.346 47.826 15.61 0.00 45.65 2.90
8851 13958 2.621929 CCCTCCGATCCTAGATGTAGGG 60.622 59.091 15.61 0.17 45.65 3.53
8852 13959 2.309162 TCCCTCCGATCCTAGATGTAGG 59.691 54.545 9.72 9.72 46.85 3.18
8853 13960 3.009695 ACTCCCTCCGATCCTAGATGTAG 59.990 52.174 0.00 0.00 0.00 2.74
8854 13961 2.987437 ACTCCCTCCGATCCTAGATGTA 59.013 50.000 0.00 0.00 0.00 2.29
8856 13963 2.595750 ACTCCCTCCGATCCTAGATG 57.404 55.000 0.00 0.00 0.00 2.90
8857 13964 5.732170 TCTTATACTCCCTCCGATCCTAGAT 59.268 44.000 0.00 0.00 0.00 1.98
8858 13965 5.099378 TCTTATACTCCCTCCGATCCTAGA 58.901 45.833 0.00 0.00 0.00 2.43
8859 13966 5.045432 ACTCTTATACTCCCTCCGATCCTAG 60.045 48.000 0.00 0.00 0.00 3.02
8860 13967 4.850963 ACTCTTATACTCCCTCCGATCCTA 59.149 45.833 0.00 0.00 0.00 2.94
8861 13968 3.658705 ACTCTTATACTCCCTCCGATCCT 59.341 47.826 0.00 0.00 0.00 3.24
8862 13969 3.759618 CACTCTTATACTCCCTCCGATCC 59.240 52.174 0.00 0.00 0.00 3.36
8863 13970 4.400120 ACACTCTTATACTCCCTCCGATC 58.600 47.826 0.00 0.00 0.00 3.69
8864 13971 4.456662 ACACTCTTATACTCCCTCCGAT 57.543 45.455 0.00 0.00 0.00 4.18
8865 13972 3.947612 ACACTCTTATACTCCCTCCGA 57.052 47.619 0.00 0.00 0.00 4.55
8866 13973 5.826737 TCTAAACACTCTTATACTCCCTCCG 59.173 44.000 0.00 0.00 0.00 4.63
8867 13974 7.506261 TGATCTAAACACTCTTATACTCCCTCC 59.494 40.741 0.00 0.00 0.00 4.30
8868 13975 8.354426 GTGATCTAAACACTCTTATACTCCCTC 58.646 40.741 0.00 0.00 35.66 4.30
8869 13976 8.062536 AGTGATCTAAACACTCTTATACTCCCT 58.937 37.037 0.00 0.00 43.84 4.20
8870 13977 8.240267 AGTGATCTAAACACTCTTATACTCCC 57.760 38.462 0.00 0.00 43.84 4.30
8925 14032 9.654663 AGATTAACATGTACTTCCTCTGTAAAC 57.345 33.333 0.00 0.00 0.00 2.01
8926 14033 9.871238 GAGATTAACATGTACTTCCTCTGTAAA 57.129 33.333 0.00 0.00 0.00 2.01
8927 14034 8.475639 GGAGATTAACATGTACTTCCTCTGTAA 58.524 37.037 0.00 0.00 0.00 2.41
8928 14035 7.618117 TGGAGATTAACATGTACTTCCTCTGTA 59.382 37.037 0.00 0.00 0.00 2.74
8931 14038 7.504403 CATGGAGATTAACATGTACTTCCTCT 58.496 38.462 0.00 0.00 39.59 3.69
8936 14043 7.281774 CAGAAGCATGGAGATTAACATGTACTT 59.718 37.037 0.00 0.00 44.74 2.24
8993 14100 1.808945 CACGGAATTCTTCAAGCAGCT 59.191 47.619 5.23 0.00 0.00 4.24
9011 14118 4.752101 CAGGGGATTCGAAGATGTATTCAC 59.248 45.833 3.35 0.00 35.04 3.18
9012 14119 4.653801 TCAGGGGATTCGAAGATGTATTCA 59.346 41.667 3.35 0.00 35.04 2.57
9038 14145 6.015856 TCACCCGAAGAGATAGAGAATGATTC 60.016 42.308 0.00 0.00 0.00 2.52
9057 14164 1.146930 CACCATCCCTGATCACCCG 59.853 63.158 0.00 0.00 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.