Multiple sequence alignment - TraesCS7B01G054500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G054500 chr7B 100.000 5209 0 0 1 5209 57637212 57632004 0.000000e+00 9620.0
1 TraesCS7B01G054500 chr7B 77.982 763 143 24 4443 5194 32549243 32549991 6.150000e-124 455.0
2 TraesCS7B01G054500 chr7D 94.532 4590 200 23 644 5209 101098319 101093757 0.000000e+00 7038.0
3 TraesCS7B01G054500 chr7D 80.949 1307 241 8 1303 2605 6780073 6781375 0.000000e+00 1027.0
4 TraesCS7B01G054500 chr7D 83.932 1058 138 19 3070 4121 6781732 6782763 0.000000e+00 983.0
5 TraesCS7B01G054500 chr7D 95.714 70 3 0 230 299 101098785 101098716 4.260000e-21 113.0
6 TraesCS7B01G054500 chr7A 95.121 3628 146 13 644 4264 103218082 103214479 0.000000e+00 5690.0
7 TraesCS7B01G054500 chr7A 82.637 1244 212 4 1364 2605 7766074 7767315 0.000000e+00 1098.0
8 TraesCS7B01G054500 chr7A 82.103 1084 153 28 3058 4121 7767660 7768722 0.000000e+00 889.0
9 TraesCS7B01G054500 chr7A 81.757 592 101 6 4363 4949 103211726 103211137 6.060000e-134 488.0
10 TraesCS7B01G054500 chr7A 83.333 474 73 6 4724 5194 85089467 85089937 2.880000e-117 433.0
11 TraesCS7B01G054500 chr7A 91.071 224 20 0 1 224 123241917 123242140 2.360000e-78 303.0
12 TraesCS7B01G054500 chr7A 82.716 324 54 2 2665 2987 7767303 7767625 2.370000e-73 287.0
13 TraesCS7B01G054500 chr7A 93.662 142 9 0 225 366 103218220 103218079 4.090000e-51 213.0
14 TraesCS7B01G054500 chr4A 81.643 1242 228 0 1364 2605 733452775 733454016 0.000000e+00 1031.0
15 TraesCS7B01G054500 chr4A 80.704 1306 246 5 1303 2605 733423062 733421760 0.000000e+00 1011.0
16 TraesCS7B01G054500 chr4A 82.823 1077 138 29 3070 4121 733421403 733420349 0.000000e+00 920.0
17 TraesCS7B01G054500 chr4A 82.922 931 122 24 3070 3985 733454371 733455279 0.000000e+00 804.0
18 TraesCS7B01G054500 chr4A 92.544 228 16 1 1 227 718151019 718150792 5.030000e-85 326.0
19 TraesCS7B01G054500 chr4A 92.105 228 17 1 1 227 718047771 718047544 2.340000e-83 320.0
20 TraesCS7B01G054500 chr4A 82.558 344 54 6 2665 3006 733421772 733421433 1.100000e-76 298.0
21 TraesCS7B01G054500 chr4A 88.710 62 5 2 3813 3873 60926388 60926328 2.010000e-09 75.0
22 TraesCS7B01G054500 chrUn 81.481 1242 230 0 1364 2605 334535602 334534361 0.000000e+00 1020.0
23 TraesCS7B01G054500 chrUn 80.769 1144 220 0 1462 2605 339771814 339770671 0.000000e+00 894.0
24 TraesCS7B01G054500 chrUn 80.769 1144 220 0 1462 2605 339774475 339775618 0.000000e+00 894.0
25 TraesCS7B01G054500 chrUn 83.351 931 118 24 3070 3985 339770316 339769408 0.000000e+00 826.0
26 TraesCS7B01G054500 chrUn 83.351 931 118 24 3070 3985 339775973 339776881 0.000000e+00 826.0
27 TraesCS7B01G054500 chrUn 82.840 810 102 24 3191 3985 464059170 464058383 0.000000e+00 691.0
28 TraesCS7B01G054500 chrUn 82.369 726 91 24 3275 3985 467116536 467115833 9.650000e-167 597.0
29 TraesCS7B01G054500 chrUn 93.750 224 14 0 1 224 85061074 85061297 2.320000e-88 337.0
30 TraesCS7B01G054500 chrUn 74.742 388 68 22 4399 4778 108612429 108612794 4.200000e-31 147.0
31 TraesCS7B01G054500 chr5B 76.810 815 159 18 4397 5196 51058231 51057432 1.040000e-116 431.0
32 TraesCS7B01G054500 chr5B 93.907 279 17 0 362 640 492534926 492534648 6.240000e-114 422.0
33 TraesCS7B01G054500 chr5B 94.224 277 15 1 363 639 671039801 671039526 6.240000e-114 422.0
34 TraesCS7B01G054500 chr5B 93.548 279 18 0 361 639 439263995 439263717 2.900000e-112 416.0
35 TraesCS7B01G054500 chr5B 76.039 818 160 24 4397 5196 50534775 50535574 4.890000e-105 392.0
36 TraesCS7B01G054500 chr6B 93.448 290 16 2 363 649 149443373 149443084 1.340000e-115 427.0
37 TraesCS7B01G054500 chr6B 93.571 280 18 0 360 639 5681688 5681967 8.070000e-113 418.0
38 TraesCS7B01G054500 chr6B 79.070 172 32 4 5023 5194 572556919 572556752 1.190000e-21 115.0
39 TraesCS7B01G054500 chr5D 94.224 277 16 0 363 639 450609053 450608777 1.730000e-114 424.0
40 TraesCS7B01G054500 chr5D 74.403 293 55 9 4880 5153 3503881 3503590 1.980000e-19 108.0
41 TraesCS7B01G054500 chr3B 94.182 275 16 0 365 639 17350289 17350563 2.240000e-113 420.0
42 TraesCS7B01G054500 chr3B 90.625 224 20 1 2 224 762099230 762099453 3.940000e-76 296.0
43 TraesCS7B01G054500 chr3B 75.734 647 112 33 4581 5196 776175282 776175914 3.070000e-72 283.0
44 TraesCS7B01G054500 chr2B 93.863 277 17 0 363 639 111009127 111009403 8.070000e-113 418.0
45 TraesCS7B01G054500 chr2B 93.750 48 3 0 3824 3871 576744548 576744501 7.240000e-09 73.1
46 TraesCS7B01G054500 chr1B 93.571 280 18 0 360 639 495804251 495803972 8.070000e-113 418.0
47 TraesCS7B01G054500 chr1B 76.966 356 73 8 4842 5195 203906912 203906564 1.480000e-45 195.0
48 TraesCS7B01G054500 chr4D 78.101 653 119 20 4397 5034 54619223 54619866 4.890000e-105 392.0
49 TraesCS7B01G054500 chr4D 88.710 62 5 2 3813 3873 403396628 403396568 2.010000e-09 75.0
50 TraesCS7B01G054500 chr5A 89.078 293 28 3 365 654 31115972 31115681 1.380000e-95 361.0
51 TraesCS7B01G054500 chr2A 88.699 292 30 2 365 653 763397583 763397874 2.310000e-93 353.0
52 TraesCS7B01G054500 chr2A 92.411 224 16 1 1 224 111890980 111891202 8.420000e-83 318.0
53 TraesCS7B01G054500 chr4B 93.722 223 14 0 1 223 17467487 17467709 8.360000e-88 335.0
54 TraesCS7B01G054500 chr4B 92.727 55 3 1 3820 3873 500254461 500254407 1.560000e-10 78.7
55 TraesCS7B01G054500 chr1A 87.241 290 31 6 367 652 471794287 471794574 5.030000e-85 326.0
56 TraesCS7B01G054500 chr1A 83.981 206 30 3 4842 5045 562046101 562045897 1.480000e-45 195.0
57 TraesCS7B01G054500 chr3A 92.000 225 18 0 1 225 24972633 24972857 3.030000e-82 316.0
58 TraesCS7B01G054500 chr3D 91.071 224 20 0 1 224 484302510 484302287 2.360000e-78 303.0
59 TraesCS7B01G054500 chr3D 95.833 48 1 1 3820 3866 48365679 48365632 5.590000e-10 76.8
60 TraesCS7B01G054500 chr3D 86.364 66 8 1 2892 2957 549451113 549451177 2.600000e-08 71.3
61 TraesCS7B01G054500 chr6D 90.909 55 3 2 3826 3879 470961823 470961770 7.240000e-09 73.1
62 TraesCS7B01G054500 chr2D 93.750 48 3 0 3824 3871 492022264 492022217 7.240000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G054500 chr7B 57632004 57637212 5208 True 9620.000000 9620 100.000000 1 5209 1 chr7B.!!$R1 5208
1 TraesCS7B01G054500 chr7B 32549243 32549991 748 False 455.000000 455 77.982000 4443 5194 1 chr7B.!!$F1 751
2 TraesCS7B01G054500 chr7D 101093757 101098785 5028 True 3575.500000 7038 95.123000 230 5209 2 chr7D.!!$R1 4979
3 TraesCS7B01G054500 chr7D 6780073 6782763 2690 False 1005.000000 1027 82.440500 1303 4121 2 chr7D.!!$F1 2818
4 TraesCS7B01G054500 chr7A 103211137 103218220 7083 True 2130.333333 5690 90.180000 225 4949 3 chr7A.!!$R1 4724
5 TraesCS7B01G054500 chr7A 7766074 7768722 2648 False 758.000000 1098 82.485333 1364 4121 3 chr7A.!!$F3 2757
6 TraesCS7B01G054500 chr4A 733452775 733455279 2504 False 917.500000 1031 82.282500 1364 3985 2 chr4A.!!$F1 2621
7 TraesCS7B01G054500 chr4A 733420349 733423062 2713 True 743.000000 1011 82.028333 1303 4121 3 chr4A.!!$R4 2818
8 TraesCS7B01G054500 chrUn 334534361 334535602 1241 True 1020.000000 1020 81.481000 1364 2605 1 chrUn.!!$R1 1241
9 TraesCS7B01G054500 chrUn 339769408 339771814 2406 True 860.000000 894 82.060000 1462 3985 2 chrUn.!!$R4 2523
10 TraesCS7B01G054500 chrUn 339774475 339776881 2406 False 860.000000 894 82.060000 1462 3985 2 chrUn.!!$F3 2523
11 TraesCS7B01G054500 chrUn 464058383 464059170 787 True 691.000000 691 82.840000 3191 3985 1 chrUn.!!$R2 794
12 TraesCS7B01G054500 chrUn 467115833 467116536 703 True 597.000000 597 82.369000 3275 3985 1 chrUn.!!$R3 710
13 TraesCS7B01G054500 chr5B 51057432 51058231 799 True 431.000000 431 76.810000 4397 5196 1 chr5B.!!$R1 799
14 TraesCS7B01G054500 chr5B 50534775 50535574 799 False 392.000000 392 76.039000 4397 5196 1 chr5B.!!$F1 799
15 TraesCS7B01G054500 chr3B 776175282 776175914 632 False 283.000000 283 75.734000 4581 5196 1 chr3B.!!$F3 615
16 TraesCS7B01G054500 chr4D 54619223 54619866 643 False 392.000000 392 78.101000 4397 5034 1 chr4D.!!$F1 637

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
140 141 0.105760 TGAAACAGCCAACCACCCAT 60.106 50.000 0.0 0.0 0.00 4.00 F
568 902 0.179001 AAGTCCCAGGAACCAAACGG 60.179 55.000 0.0 0.0 0.00 4.44 F
710 1044 0.524862 GTTTCAGCCAGCCAGTCATG 59.475 55.000 0.0 0.0 0.00 3.07 F
2317 2666 1.068250 GGGCTCCTCGATCTTTCGG 59.932 63.158 0.0 0.0 45.53 4.30 F
2724 3073 1.543429 CGGTCCTTGGAGAATATGGCC 60.543 57.143 0.0 0.0 0.00 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1911 2260 0.889306 ACGACAGGTACAGAAGCTCC 59.111 55.000 0.00 0.00 32.16 4.70 R
2232 2581 0.954452 GGTTGTTTGAGAGGTGCAGG 59.046 55.000 0.00 0.00 0.00 4.85 R
2343 2692 2.433145 CACTGCACGATGCTCGGT 60.433 61.111 10.54 5.30 45.59 4.69 R
3732 4103 0.386858 TGAAGAGAAGAACGTCGGCG 60.387 55.000 8.42 8.42 44.93 6.46 R
4529 7572 0.535328 TCCGACGCAAATTTGGACCA 60.535 50.000 19.47 0.00 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.740822 GGGCCCCGCATGTCAGTT 62.741 66.667 12.23 0.00 0.00 3.16
22 23 2.270850 GGCCCCGCATGTCAGTTA 59.729 61.111 0.00 0.00 0.00 2.24
23 24 1.377987 GGCCCCGCATGTCAGTTAA 60.378 57.895 0.00 0.00 0.00 2.01
24 25 1.654023 GGCCCCGCATGTCAGTTAAC 61.654 60.000 0.00 0.00 0.00 2.01
25 26 1.977594 GCCCCGCATGTCAGTTAACG 61.978 60.000 0.00 0.00 0.00 3.18
26 27 1.366111 CCCCGCATGTCAGTTAACGG 61.366 60.000 0.00 0.00 40.30 4.44
27 28 0.672401 CCCGCATGTCAGTTAACGGT 60.672 55.000 5.64 0.00 38.99 4.83
28 29 0.719465 CCGCATGTCAGTTAACGGTC 59.281 55.000 5.64 1.01 35.99 4.79
29 30 1.424403 CGCATGTCAGTTAACGGTCA 58.576 50.000 7.94 7.94 0.00 4.02
30 31 1.795872 CGCATGTCAGTTAACGGTCAA 59.204 47.619 9.34 0.00 0.00 3.18
31 32 2.222213 CGCATGTCAGTTAACGGTCAAA 59.778 45.455 9.34 0.00 0.00 2.69
32 33 3.551551 GCATGTCAGTTAACGGTCAAAC 58.448 45.455 9.34 0.05 0.00 2.93
33 34 3.002862 GCATGTCAGTTAACGGTCAAACA 59.997 43.478 9.34 5.36 0.00 2.83
34 35 4.523813 CATGTCAGTTAACGGTCAAACAC 58.476 43.478 9.34 0.00 0.00 3.32
35 36 3.597255 TGTCAGTTAACGGTCAAACACA 58.403 40.909 5.64 0.00 0.00 3.72
36 37 3.371591 TGTCAGTTAACGGTCAAACACAC 59.628 43.478 5.64 5.46 0.00 3.82
37 38 2.604011 TCAGTTAACGGTCAAACACACG 59.396 45.455 5.64 0.00 0.00 4.49
38 39 1.935199 AGTTAACGGTCAAACACACGG 59.065 47.619 0.00 0.00 0.00 4.94
39 40 1.665169 GTTAACGGTCAAACACACGGT 59.335 47.619 0.00 0.00 0.00 4.83
40 41 1.569708 TAACGGTCAAACACACGGTC 58.430 50.000 0.00 0.00 0.00 4.79
41 42 0.391395 AACGGTCAAACACACGGTCA 60.391 50.000 0.00 0.00 0.00 4.02
42 43 0.391395 ACGGTCAAACACACGGTCAA 60.391 50.000 0.00 0.00 0.00 3.18
43 44 0.727970 CGGTCAAACACACGGTCAAA 59.272 50.000 0.00 0.00 0.00 2.69
44 45 1.267832 CGGTCAAACACACGGTCAAAG 60.268 52.381 0.00 0.00 0.00 2.77
45 46 2.011222 GGTCAAACACACGGTCAAAGA 58.989 47.619 0.00 0.00 0.00 2.52
46 47 2.031683 GGTCAAACACACGGTCAAAGAG 59.968 50.000 0.00 0.00 0.00 2.85
47 48 2.933906 GTCAAACACACGGTCAAAGAGA 59.066 45.455 0.00 0.00 0.00 3.10
48 49 2.933906 TCAAACACACGGTCAAAGAGAC 59.066 45.455 0.00 0.00 46.83 3.36
56 57 3.851949 ACGGTCAAAGAGACGGACTGTT 61.852 50.000 9.34 0.00 46.10 3.16
57 58 5.300637 ACGGTCAAAGAGACGGACTGTTT 62.301 47.826 9.34 0.00 46.10 2.83
58 59 5.998189 ACGGTCAAAGAGACGGACTGTTTA 61.998 45.833 9.34 0.00 46.10 2.01
59 60 7.726442 ACGGTCAAAGAGACGGACTGTTTAG 62.726 48.000 9.34 0.00 46.10 1.85
60 61 3.988517 GTCAAAGAGACGGACTGTTTAGG 59.011 47.826 2.68 0.00 39.54 2.69
61 62 3.640029 TCAAAGAGACGGACTGTTTAGGT 59.360 43.478 2.68 0.00 39.54 3.08
62 63 3.662247 AAGAGACGGACTGTTTAGGTG 57.338 47.619 0.00 0.00 0.00 4.00
63 64 1.272769 AGAGACGGACTGTTTAGGTGC 59.727 52.381 0.00 0.00 0.00 5.01
65 66 3.870606 CGGACTGTTTAGGTGCGG 58.129 61.111 0.00 0.00 42.97 5.69
66 67 1.740296 CGGACTGTTTAGGTGCGGG 60.740 63.158 0.00 0.00 42.97 6.13
67 68 2.038837 GGACTGTTTAGGTGCGGGC 61.039 63.158 0.00 0.00 0.00 6.13
68 69 2.033602 ACTGTTTAGGTGCGGGCC 59.966 61.111 0.00 0.00 0.00 5.80
69 70 2.750237 CTGTTTAGGTGCGGGCCC 60.750 66.667 13.57 13.57 0.00 5.80
70 71 4.708386 TGTTTAGGTGCGGGCCCG 62.708 66.667 40.26 40.26 43.09 6.13
80 81 4.107029 CGGGCCCGACCTATCATA 57.893 61.111 41.82 0.00 42.83 2.15
81 82 2.358039 CGGGCCCGACCTATCATAA 58.642 57.895 41.82 0.00 42.83 1.90
82 83 0.682852 CGGGCCCGACCTATCATAAA 59.317 55.000 41.82 0.00 42.83 1.40
83 84 1.607251 CGGGCCCGACCTATCATAAAC 60.607 57.143 41.82 0.00 42.83 2.01
84 85 1.418637 GGGCCCGACCTATCATAAACA 59.581 52.381 5.69 0.00 39.10 2.83
85 86 2.039879 GGGCCCGACCTATCATAAACAT 59.960 50.000 5.69 0.00 39.10 2.71
86 87 3.074412 GGCCCGACCTATCATAAACATG 58.926 50.000 0.00 0.00 34.51 3.21
87 88 3.496160 GGCCCGACCTATCATAAACATGT 60.496 47.826 0.00 0.00 34.51 3.21
88 89 4.134563 GCCCGACCTATCATAAACATGTT 58.865 43.478 4.92 4.92 0.00 2.71
89 90 4.578928 GCCCGACCTATCATAAACATGTTT 59.421 41.667 25.99 25.99 36.63 2.83
90 91 5.761234 GCCCGACCTATCATAAACATGTTTA 59.239 40.000 28.30 28.30 39.12 2.01
91 92 6.261381 GCCCGACCTATCATAAACATGTTTAA 59.739 38.462 29.44 17.64 38.38 1.52
92 93 7.201750 GCCCGACCTATCATAAACATGTTTAAA 60.202 37.037 29.44 21.77 38.38 1.52
93 94 8.846211 CCCGACCTATCATAAACATGTTTAAAT 58.154 33.333 29.44 25.53 38.38 1.40
115 116 8.868635 AAATTTTAAACAACATGCATTTTGGG 57.131 26.923 25.16 5.08 0.00 4.12
116 117 7.579761 ATTTTAAACAACATGCATTTTGGGT 57.420 28.000 25.16 16.21 0.00 4.51
117 118 7.396540 TTTTAAACAACATGCATTTTGGGTT 57.603 28.000 25.16 20.26 0.00 4.11
118 119 7.396540 TTTAAACAACATGCATTTTGGGTTT 57.603 28.000 25.16 19.43 33.36 3.27
119 120 5.911378 AAACAACATGCATTTTGGGTTTT 57.089 30.435 25.16 15.55 0.00 2.43
120 121 5.497635 AACAACATGCATTTTGGGTTTTC 57.502 34.783 25.16 0.00 0.00 2.29
121 122 4.779696 ACAACATGCATTTTGGGTTTTCT 58.220 34.783 25.16 4.07 0.00 2.52
122 123 4.575645 ACAACATGCATTTTGGGTTTTCTG 59.424 37.500 25.16 6.32 0.00 3.02
123 124 4.686191 ACATGCATTTTGGGTTTTCTGA 57.314 36.364 0.00 0.00 0.00 3.27
124 125 5.033589 ACATGCATTTTGGGTTTTCTGAA 57.966 34.783 0.00 0.00 0.00 3.02
125 126 5.435291 ACATGCATTTTGGGTTTTCTGAAA 58.565 33.333 0.00 0.00 0.00 2.69
126 127 5.296531 ACATGCATTTTGGGTTTTCTGAAAC 59.703 36.000 1.58 0.00 43.50 2.78
127 128 4.836825 TGCATTTTGGGTTTTCTGAAACA 58.163 34.783 1.58 0.00 45.52 2.83
128 129 4.874966 TGCATTTTGGGTTTTCTGAAACAG 59.125 37.500 1.58 0.00 45.52 3.16
129 130 4.260743 GCATTTTGGGTTTTCTGAAACAGC 60.261 41.667 1.58 4.53 45.52 4.40
130 131 3.535280 TTTGGGTTTTCTGAAACAGCC 57.465 42.857 18.30 18.30 45.52 4.85
131 132 2.151502 TGGGTTTTCTGAAACAGCCA 57.848 45.000 21.35 21.35 45.52 4.75
132 133 2.461695 TGGGTTTTCTGAAACAGCCAA 58.538 42.857 22.21 10.33 45.52 4.52
133 134 2.167487 TGGGTTTTCTGAAACAGCCAAC 59.833 45.455 22.21 10.87 45.52 3.77
134 135 2.483013 GGGTTTTCTGAAACAGCCAACC 60.483 50.000 19.35 15.17 45.52 3.77
135 136 2.167487 GGTTTTCTGAAACAGCCAACCA 59.833 45.455 18.33 0.00 45.52 3.67
136 137 3.186909 GTTTTCTGAAACAGCCAACCAC 58.813 45.455 1.58 0.00 43.65 4.16
137 138 1.398692 TTCTGAAACAGCCAACCACC 58.601 50.000 0.00 0.00 0.00 4.61
138 139 0.467290 TCTGAAACAGCCAACCACCC 60.467 55.000 0.00 0.00 0.00 4.61
139 140 0.754957 CTGAAACAGCCAACCACCCA 60.755 55.000 0.00 0.00 0.00 4.51
140 141 0.105760 TGAAACAGCCAACCACCCAT 60.106 50.000 0.00 0.00 0.00 4.00
141 142 1.047801 GAAACAGCCAACCACCCATT 58.952 50.000 0.00 0.00 0.00 3.16
142 143 1.416030 GAAACAGCCAACCACCCATTT 59.584 47.619 0.00 0.00 0.00 2.32
143 144 0.758123 AACAGCCAACCACCCATTTG 59.242 50.000 0.00 0.00 0.00 2.32
144 145 1.120795 ACAGCCAACCACCCATTTGG 61.121 55.000 0.00 0.00 44.54 3.28
160 161 7.938140 CCCATTTGGTAGTTATCTGAGAAAA 57.062 36.000 0.00 0.00 0.00 2.29
161 162 8.348285 CCCATTTGGTAGTTATCTGAGAAAAA 57.652 34.615 0.00 0.00 0.00 1.94
162 163 8.971073 CCCATTTGGTAGTTATCTGAGAAAAAT 58.029 33.333 0.00 0.00 0.00 1.82
201 202 5.853572 TTTGGAACCCTATCCTGTAAAGT 57.146 39.130 0.00 0.00 40.35 2.66
202 203 6.956102 TTTGGAACCCTATCCTGTAAAGTA 57.044 37.500 0.00 0.00 40.35 2.24
203 204 6.555463 TTGGAACCCTATCCTGTAAAGTAG 57.445 41.667 0.00 0.00 40.35 2.57
204 205 5.596763 TGGAACCCTATCCTGTAAAGTAGT 58.403 41.667 0.00 0.00 40.35 2.73
205 206 6.744822 TGGAACCCTATCCTGTAAAGTAGTA 58.255 40.000 0.00 0.00 40.35 1.82
206 207 6.837568 TGGAACCCTATCCTGTAAAGTAGTAG 59.162 42.308 0.00 0.00 40.35 2.57
207 208 6.838090 GGAACCCTATCCTGTAAAGTAGTAGT 59.162 42.308 0.00 0.00 36.50 2.73
208 209 7.344093 GGAACCCTATCCTGTAAAGTAGTAGTT 59.656 40.741 0.00 0.00 36.50 2.24
209 210 8.676397 AACCCTATCCTGTAAAGTAGTAGTTT 57.324 34.615 8.04 8.04 0.00 2.66
210 211 8.676397 ACCCTATCCTGTAAAGTAGTAGTTTT 57.324 34.615 8.25 0.00 0.00 2.43
211 212 9.774071 ACCCTATCCTGTAAAGTAGTAGTTTTA 57.226 33.333 8.25 0.00 0.00 1.52
237 238 8.561738 TGCTATTTACTCCTTTTTCGAAGAAT 57.438 30.769 1.11 0.00 45.90 2.40
238 239 9.010029 TGCTATTTACTCCTTTTTCGAAGAATT 57.990 29.630 1.11 0.00 45.90 2.17
306 307 1.377333 GCTCGGGTAAAAGCCAGCT 60.377 57.895 10.38 0.00 37.13 4.24
309 310 2.919228 CTCGGGTAAAAGCCAGCTAAT 58.081 47.619 0.00 0.00 34.89 1.73
313 314 5.254901 TCGGGTAAAAGCCAGCTAATTTTA 58.745 37.500 0.00 6.05 34.89 1.52
315 316 6.378848 TCGGGTAAAAGCCAGCTAATTTTATT 59.621 34.615 11.07 0.00 34.89 1.40
353 687 5.480422 CCTCCAAACCTTAATTAGCCTTTGT 59.520 40.000 8.70 0.00 0.00 2.83
366 700 4.202245 AGCCTTTGTGACGCTAATTAGA 57.798 40.909 16.85 0.00 0.00 2.10
367 701 4.184629 AGCCTTTGTGACGCTAATTAGAG 58.815 43.478 16.85 15.31 0.00 2.43
368 702 3.309954 GCCTTTGTGACGCTAATTAGAGG 59.690 47.826 16.85 11.59 0.00 3.69
369 703 3.871594 CCTTTGTGACGCTAATTAGAGGG 59.128 47.826 16.85 3.72 35.58 4.30
370 704 4.504858 CTTTGTGACGCTAATTAGAGGGT 58.495 43.478 16.85 7.15 44.59 4.34
371 705 3.520290 TGTGACGCTAATTAGAGGGTG 57.480 47.619 16.85 0.00 42.21 4.61
372 706 2.829720 TGTGACGCTAATTAGAGGGTGT 59.170 45.455 16.85 2.55 42.21 4.16
373 707 3.259876 TGTGACGCTAATTAGAGGGTGTT 59.740 43.478 16.85 0.00 42.21 3.32
374 708 4.251268 GTGACGCTAATTAGAGGGTGTTT 58.749 43.478 16.85 0.00 42.21 2.83
375 709 4.092968 GTGACGCTAATTAGAGGGTGTTTG 59.907 45.833 16.85 0.00 42.21 2.93
376 710 4.251268 GACGCTAATTAGAGGGTGTTTGT 58.749 43.478 16.85 0.00 42.21 2.83
377 711 4.648651 ACGCTAATTAGAGGGTGTTTGTT 58.351 39.130 16.85 0.00 40.77 2.83
378 712 5.067954 ACGCTAATTAGAGGGTGTTTGTTT 58.932 37.500 16.85 0.00 40.77 2.83
379 713 5.533528 ACGCTAATTAGAGGGTGTTTGTTTT 59.466 36.000 16.85 0.00 40.77 2.43
380 714 6.084277 CGCTAATTAGAGGGTGTTTGTTTTC 58.916 40.000 16.85 0.00 0.00 2.29
381 715 6.293735 CGCTAATTAGAGGGTGTTTGTTTTCA 60.294 38.462 16.85 0.00 0.00 2.69
382 716 7.084486 GCTAATTAGAGGGTGTTTGTTTTCAG 58.916 38.462 16.85 0.00 0.00 3.02
383 717 6.405278 AATTAGAGGGTGTTTGTTTTCAGG 57.595 37.500 0.00 0.00 0.00 3.86
384 718 2.666317 AGAGGGTGTTTGTTTTCAGGG 58.334 47.619 0.00 0.00 0.00 4.45
385 719 2.243736 AGAGGGTGTTTGTTTTCAGGGA 59.756 45.455 0.00 0.00 0.00 4.20
386 720 2.361119 GAGGGTGTTTGTTTTCAGGGAC 59.639 50.000 0.00 0.00 0.00 4.46
387 721 2.024369 AGGGTGTTTGTTTTCAGGGACT 60.024 45.455 0.00 0.00 43.88 3.85
388 722 2.764010 GGGTGTTTGTTTTCAGGGACTT 59.236 45.455 0.00 0.00 34.60 3.01
389 723 3.955551 GGGTGTTTGTTTTCAGGGACTTA 59.044 43.478 0.00 0.00 34.60 2.24
390 724 4.587262 GGGTGTTTGTTTTCAGGGACTTAT 59.413 41.667 0.00 0.00 34.60 1.73
391 725 5.069914 GGGTGTTTGTTTTCAGGGACTTATT 59.930 40.000 0.00 0.00 34.60 1.40
392 726 5.983118 GGTGTTTGTTTTCAGGGACTTATTG 59.017 40.000 0.00 0.00 34.60 1.90
393 727 5.983118 GTGTTTGTTTTCAGGGACTTATTGG 59.017 40.000 0.00 0.00 34.60 3.16
394 728 5.894393 TGTTTGTTTTCAGGGACTTATTGGA 59.106 36.000 0.00 0.00 34.60 3.53
395 729 6.553100 TGTTTGTTTTCAGGGACTTATTGGAT 59.447 34.615 0.00 0.00 34.60 3.41
396 730 7.070571 TGTTTGTTTTCAGGGACTTATTGGATT 59.929 33.333 0.00 0.00 34.60 3.01
397 731 8.581578 GTTTGTTTTCAGGGACTTATTGGATTA 58.418 33.333 0.00 0.00 34.60 1.75
398 732 7.938140 TGTTTTCAGGGACTTATTGGATTAG 57.062 36.000 0.00 0.00 34.60 1.73
399 733 6.889722 TGTTTTCAGGGACTTATTGGATTAGG 59.110 38.462 0.00 0.00 34.60 2.69
400 734 5.646692 TTCAGGGACTTATTGGATTAGGG 57.353 43.478 0.00 0.00 34.60 3.53
401 735 4.903149 TCAGGGACTTATTGGATTAGGGA 58.097 43.478 0.00 0.00 34.60 4.20
402 736 4.658901 TCAGGGACTTATTGGATTAGGGAC 59.341 45.833 0.00 0.00 34.60 4.46
403 737 4.660771 CAGGGACTTATTGGATTAGGGACT 59.339 45.833 0.00 0.00 39.39 3.85
404 738 5.132816 CAGGGACTTATTGGATTAGGGACTT 59.867 44.000 0.00 0.00 36.39 3.01
405 739 6.329197 CAGGGACTTATTGGATTAGGGACTTA 59.671 42.308 0.00 0.00 36.39 2.24
406 740 6.912561 AGGGACTTATTGGATTAGGGACTTAA 59.087 38.462 0.00 0.00 34.75 1.85
407 741 7.407918 AGGGACTTATTGGATTAGGGACTTAAA 59.592 37.037 0.00 0.00 34.75 1.52
408 742 8.057011 GGGACTTATTGGATTAGGGACTTAAAA 58.943 37.037 0.00 0.00 41.75 1.52
409 743 9.470399 GGACTTATTGGATTAGGGACTTAAAAA 57.530 33.333 0.00 0.00 41.75 1.94
433 767 9.682465 AAAAGTTCCTATAAGTCCCATCTAAAC 57.318 33.333 0.00 0.00 0.00 2.01
434 768 7.376335 AGTTCCTATAAGTCCCATCTAAACC 57.624 40.000 0.00 0.00 0.00 3.27
435 769 6.906901 AGTTCCTATAAGTCCCATCTAAACCA 59.093 38.462 0.00 0.00 0.00 3.67
436 770 7.404980 AGTTCCTATAAGTCCCATCTAAACCAA 59.595 37.037 0.00 0.00 0.00 3.67
437 771 7.758820 TCCTATAAGTCCCATCTAAACCAAA 57.241 36.000 0.00 0.00 0.00 3.28
438 772 7.571025 TCCTATAAGTCCCATCTAAACCAAAC 58.429 38.462 0.00 0.00 0.00 2.93
439 773 7.183112 TCCTATAAGTCCCATCTAAACCAAACA 59.817 37.037 0.00 0.00 0.00 2.83
440 774 7.499232 CCTATAAGTCCCATCTAAACCAAACAG 59.501 40.741 0.00 0.00 0.00 3.16
441 775 4.034285 AGTCCCATCTAAACCAAACAGG 57.966 45.455 0.00 0.00 45.67 4.00
442 776 3.655777 AGTCCCATCTAAACCAAACAGGA 59.344 43.478 0.00 0.00 41.22 3.86
443 777 4.105697 AGTCCCATCTAAACCAAACAGGAA 59.894 41.667 0.00 0.00 41.22 3.36
444 778 4.459337 GTCCCATCTAAACCAAACAGGAAG 59.541 45.833 0.00 0.00 41.22 3.46
445 779 3.763897 CCCATCTAAACCAAACAGGAAGG 59.236 47.826 0.00 0.00 41.22 3.46
446 780 4.508405 CCCATCTAAACCAAACAGGAAGGA 60.508 45.833 0.00 0.00 41.22 3.36
447 781 4.459337 CCATCTAAACCAAACAGGAAGGAC 59.541 45.833 0.00 0.00 41.22 3.85
448 782 5.316987 CATCTAAACCAAACAGGAAGGACT 58.683 41.667 0.00 0.00 41.22 3.85
449 783 5.382664 TCTAAACCAAACAGGAAGGACTT 57.617 39.130 0.00 0.00 41.22 3.01
450 784 6.503560 TCTAAACCAAACAGGAAGGACTTA 57.496 37.500 0.00 0.00 41.22 2.24
451 785 7.086685 TCTAAACCAAACAGGAAGGACTTAT 57.913 36.000 0.00 0.00 41.22 1.73
452 786 8.209802 TCTAAACCAAACAGGAAGGACTTATA 57.790 34.615 0.00 0.00 41.22 0.98
453 787 8.319146 TCTAAACCAAACAGGAAGGACTTATAG 58.681 37.037 0.00 0.00 41.22 1.31
454 788 6.697641 AACCAAACAGGAAGGACTTATAGA 57.302 37.500 0.00 0.00 41.22 1.98
455 789 6.301169 ACCAAACAGGAAGGACTTATAGAG 57.699 41.667 0.00 0.00 41.22 2.43
456 790 6.023603 ACCAAACAGGAAGGACTTATAGAGA 58.976 40.000 0.00 0.00 41.22 3.10
457 791 6.070710 ACCAAACAGGAAGGACTTATAGAGAC 60.071 42.308 0.00 0.00 41.22 3.36
458 792 6.155393 CCAAACAGGAAGGACTTATAGAGACT 59.845 42.308 0.00 0.00 41.22 3.24
459 793 7.310734 CCAAACAGGAAGGACTTATAGAGACTT 60.311 40.741 0.00 0.00 41.22 3.01
460 794 8.750298 CAAACAGGAAGGACTTATAGAGACTTA 58.250 37.037 0.00 0.00 0.00 2.24
461 795 8.896722 AACAGGAAGGACTTATAGAGACTTAA 57.103 34.615 0.00 0.00 0.00 1.85
462 796 8.896722 ACAGGAAGGACTTATAGAGACTTAAA 57.103 34.615 0.00 0.00 0.00 1.52
463 797 8.973182 ACAGGAAGGACTTATAGAGACTTAAAG 58.027 37.037 0.00 0.00 0.00 1.85
464 798 8.973182 CAGGAAGGACTTATAGAGACTTAAAGT 58.027 37.037 0.00 0.00 33.26 2.66
465 799 8.973182 AGGAAGGACTTATAGAGACTTAAAGTG 58.027 37.037 0.00 0.00 30.83 3.16
466 800 8.198778 GGAAGGACTTATAGAGACTTAAAGTGG 58.801 40.741 0.00 0.00 30.83 4.00
467 801 7.663043 AGGACTTATAGAGACTTAAAGTGGG 57.337 40.000 0.00 0.00 30.83 4.61
468 802 6.098552 AGGACTTATAGAGACTTAAAGTGGGC 59.901 42.308 0.00 0.00 30.83 5.36
469 803 6.127140 GGACTTATAGAGACTTAAAGTGGGCA 60.127 42.308 0.00 0.00 30.83 5.36
470 804 7.419172 GGACTTATAGAGACTTAAAGTGGGCAT 60.419 40.741 0.00 0.00 30.83 4.40
471 805 7.862675 ACTTATAGAGACTTAAAGTGGGCATT 58.137 34.615 0.00 0.00 0.00 3.56
472 806 8.329502 ACTTATAGAGACTTAAAGTGGGCATTT 58.670 33.333 0.00 0.00 0.00 2.32
473 807 8.506168 TTATAGAGACTTAAAGTGGGCATTTG 57.494 34.615 0.00 0.00 0.00 2.32
474 808 4.082125 AGAGACTTAAAGTGGGCATTTGG 58.918 43.478 0.00 0.00 0.00 3.28
475 809 3.165071 AGACTTAAAGTGGGCATTTGGG 58.835 45.455 0.00 0.00 0.00 4.12
476 810 3.161866 GACTTAAAGTGGGCATTTGGGA 58.838 45.455 0.00 0.00 0.00 4.37
477 811 2.897326 ACTTAAAGTGGGCATTTGGGAC 59.103 45.455 0.00 0.00 0.00 4.46
478 812 2.990740 TAAAGTGGGCATTTGGGACT 57.009 45.000 0.00 0.00 0.00 3.85
479 813 2.101640 AAAGTGGGCATTTGGGACTT 57.898 45.000 0.00 0.00 0.00 3.01
480 814 2.990740 AAGTGGGCATTTGGGACTTA 57.009 45.000 0.00 0.00 0.00 2.24
481 815 3.473113 AAGTGGGCATTTGGGACTTAT 57.527 42.857 0.00 0.00 0.00 1.73
482 816 2.738743 AGTGGGCATTTGGGACTTATG 58.261 47.619 0.00 0.00 0.00 1.90
483 817 2.311542 AGTGGGCATTTGGGACTTATGA 59.688 45.455 0.00 0.00 0.00 2.15
484 818 3.096092 GTGGGCATTTGGGACTTATGAA 58.904 45.455 0.00 0.00 0.00 2.57
485 819 3.513515 GTGGGCATTTGGGACTTATGAAA 59.486 43.478 0.00 0.00 0.00 2.69
486 820 4.162131 GTGGGCATTTGGGACTTATGAAAT 59.838 41.667 0.00 0.00 0.00 2.17
487 821 5.362430 GTGGGCATTTGGGACTTATGAAATA 59.638 40.000 0.00 0.00 0.00 1.40
488 822 5.960811 TGGGCATTTGGGACTTATGAAATAA 59.039 36.000 0.00 0.00 36.20 1.40
504 838 7.996758 ATGAAATAAGACTCTTAAGGAGGGA 57.003 36.000 1.85 0.00 45.83 4.20
505 839 7.184067 TGAAATAAGACTCTTAAGGAGGGAC 57.816 40.000 1.85 0.00 45.83 4.46
506 840 6.960542 TGAAATAAGACTCTTAAGGAGGGACT 59.039 38.462 1.85 0.00 45.83 3.85
507 841 7.458170 TGAAATAAGACTCTTAAGGAGGGACTT 59.542 37.037 1.85 8.68 45.83 3.01
508 842 8.912614 AAATAAGACTCTTAAGGAGGGACTTA 57.087 34.615 1.85 10.13 45.83 2.24
509 843 9.508721 AAATAAGACTCTTAAGGAGGGACTTAT 57.491 33.333 1.85 11.48 45.83 1.73
511 845 9.816787 ATAAGACTCTTAAGGAGGGACTTATAG 57.183 37.037 1.85 0.00 45.83 1.31
512 846 6.616577 AGACTCTTAAGGAGGGACTTATAGG 58.383 44.000 1.85 0.00 45.83 2.57
513 847 5.718039 ACTCTTAAGGAGGGACTTATAGGG 58.282 45.833 1.85 0.00 45.83 3.53
514 848 5.439059 ACTCTTAAGGAGGGACTTATAGGGA 59.561 44.000 1.85 0.00 45.83 4.20
515 849 5.713807 TCTTAAGGAGGGACTTATAGGGAC 58.286 45.833 1.85 0.00 41.55 4.46
516 850 5.439059 TCTTAAGGAGGGACTTATAGGGACT 59.561 44.000 1.85 0.00 41.55 3.85
517 851 4.645968 AAGGAGGGACTTATAGGGACTT 57.354 45.455 0.00 0.00 41.55 3.01
518 852 5.763239 AAGGAGGGACTTATAGGGACTTA 57.237 43.478 0.00 0.00 41.55 2.24
519 853 5.970692 AGGAGGGACTTATAGGGACTTAT 57.029 43.478 0.00 0.00 41.55 1.73
520 854 7.431936 AAGGAGGGACTTATAGGGACTTATA 57.568 40.000 0.00 0.00 41.55 0.98
521 855 7.046891 AGGAGGGACTTATAGGGACTTATAG 57.953 44.000 0.00 0.00 41.55 1.31
522 856 6.571180 AGGAGGGACTTATAGGGACTTATAGT 59.429 42.308 0.00 0.00 41.55 2.12
523 857 7.076566 AGGAGGGACTTATAGGGACTTATAGTT 59.923 40.741 0.00 0.00 41.55 2.24
524 858 7.178805 GGAGGGACTTATAGGGACTTATAGTTG 59.821 44.444 0.00 0.00 41.55 3.16
525 859 7.602868 AGGGACTTATAGGGACTTATAGTTGT 58.397 38.462 0.00 0.00 34.75 3.32
526 860 8.740512 AGGGACTTATAGGGACTTATAGTTGTA 58.259 37.037 0.00 0.00 34.75 2.41
527 861 9.372189 GGGACTTATAGGGACTTATAGTTGTAA 57.628 37.037 0.00 0.00 41.75 2.41
535 869 8.562949 AGGGACTTATAGTTGTAATATGGTGT 57.437 34.615 0.00 0.00 27.25 4.16
536 870 8.999895 AGGGACTTATAGTTGTAATATGGTGTT 58.000 33.333 0.00 0.00 27.25 3.32
554 888 6.704310 TGGTGTTATAGGAACTTGTAAGTCC 58.296 40.000 0.00 2.20 41.75 3.85
555 889 6.111382 GGTGTTATAGGAACTTGTAAGTCCC 58.889 44.000 0.00 0.00 41.75 4.46
556 890 6.296030 GGTGTTATAGGAACTTGTAAGTCCCA 60.296 42.308 2.82 0.00 41.75 4.37
557 891 6.817140 GTGTTATAGGAACTTGTAAGTCCCAG 59.183 42.308 2.82 0.00 41.75 4.45
558 892 6.070424 TGTTATAGGAACTTGTAAGTCCCAGG 60.070 42.308 2.82 0.00 41.75 4.45
559 893 2.986050 AGGAACTTGTAAGTCCCAGGA 58.014 47.619 2.82 0.00 38.57 3.86
560 894 3.323775 AGGAACTTGTAAGTCCCAGGAA 58.676 45.455 2.82 0.00 38.57 3.36
561 895 3.072622 AGGAACTTGTAAGTCCCAGGAAC 59.927 47.826 2.82 0.00 38.57 3.62
562 896 3.409570 GAACTTGTAAGTCCCAGGAACC 58.590 50.000 0.00 0.00 38.57 3.62
563 897 2.414612 ACTTGTAAGTCCCAGGAACCA 58.585 47.619 0.00 0.00 32.86 3.67
564 898 2.781174 ACTTGTAAGTCCCAGGAACCAA 59.219 45.455 0.00 0.00 32.86 3.67
565 899 3.203487 ACTTGTAAGTCCCAGGAACCAAA 59.797 43.478 0.00 0.00 32.86 3.28
566 900 3.217681 TGTAAGTCCCAGGAACCAAAC 57.782 47.619 0.00 0.00 0.00 2.93
567 901 2.148768 GTAAGTCCCAGGAACCAAACG 58.851 52.381 0.00 0.00 0.00 3.60
568 902 0.179001 AAGTCCCAGGAACCAAACGG 60.179 55.000 0.00 0.00 0.00 4.44
569 903 1.602605 GTCCCAGGAACCAAACGGG 60.603 63.158 0.00 0.00 44.81 5.28
580 914 2.281539 CCAAACGGGTAGGGACTTTT 57.718 50.000 0.00 0.00 41.75 2.27
581 915 2.589720 CCAAACGGGTAGGGACTTTTT 58.410 47.619 0.00 0.00 41.75 1.94
582 916 3.753815 CCAAACGGGTAGGGACTTTTTA 58.246 45.455 0.00 0.00 41.75 1.52
583 917 4.143543 CCAAACGGGTAGGGACTTTTTAA 58.856 43.478 0.00 0.00 41.75 1.52
584 918 4.216902 CCAAACGGGTAGGGACTTTTTAAG 59.783 45.833 0.00 0.00 41.75 1.85
585 919 3.708403 ACGGGTAGGGACTTTTTAAGG 57.292 47.619 0.00 0.00 41.75 2.69
586 920 3.250617 ACGGGTAGGGACTTTTTAAGGA 58.749 45.455 0.00 0.00 41.75 3.36
587 921 3.008375 ACGGGTAGGGACTTTTTAAGGAC 59.992 47.826 0.00 0.00 41.75 3.85
588 922 3.262660 CGGGTAGGGACTTTTTAAGGACT 59.737 47.826 0.00 0.00 41.75 3.85
589 923 4.263199 CGGGTAGGGACTTTTTAAGGACTT 60.263 45.833 0.00 0.00 41.75 3.01
590 924 5.251764 GGGTAGGGACTTTTTAAGGACTTC 58.748 45.833 0.00 0.00 41.75 3.01
591 925 5.221986 GGGTAGGGACTTTTTAAGGACTTCA 60.222 44.000 0.00 0.00 41.75 3.02
592 926 5.938710 GGTAGGGACTTTTTAAGGACTTCAG 59.061 44.000 0.00 0.00 41.75 3.02
593 927 5.906772 AGGGACTTTTTAAGGACTTCAGA 57.093 39.130 0.00 0.00 27.25 3.27
594 928 5.622180 AGGGACTTTTTAAGGACTTCAGAC 58.378 41.667 0.00 0.00 27.25 3.51
595 929 5.369993 AGGGACTTTTTAAGGACTTCAGACT 59.630 40.000 0.00 0.00 27.25 3.24
596 930 6.062749 GGGACTTTTTAAGGACTTCAGACTT 58.937 40.000 0.00 0.00 0.00 3.01
597 931 7.072076 AGGGACTTTTTAAGGACTTCAGACTTA 59.928 37.037 0.00 0.00 27.25 2.24
598 932 7.883833 GGGACTTTTTAAGGACTTCAGACTTAT 59.116 37.037 0.00 0.00 0.00 1.73
599 933 9.939802 GGACTTTTTAAGGACTTCAGACTTATA 57.060 33.333 0.00 0.00 0.00 0.98
605 939 9.720769 TTTAAGGACTTCAGACTTATAAGTTGG 57.279 33.333 18.96 13.79 39.88 3.77
606 940 6.301169 AGGACTTCAGACTTATAAGTTGGG 57.699 41.667 18.96 11.55 39.88 4.12
607 941 6.023603 AGGACTTCAGACTTATAAGTTGGGA 58.976 40.000 18.96 13.44 39.88 4.37
608 942 6.070710 AGGACTTCAGACTTATAAGTTGGGAC 60.071 42.308 18.96 6.39 39.88 4.46
609 943 6.070710 GGACTTCAGACTTATAAGTTGGGACT 60.071 42.308 18.96 8.54 39.88 3.85
610 944 7.123847 GGACTTCAGACTTATAAGTTGGGACTA 59.876 40.741 18.96 3.77 39.88 2.59
611 945 8.431910 ACTTCAGACTTATAAGTTGGGACTAA 57.568 34.615 18.96 8.38 39.88 2.24
612 946 8.877195 ACTTCAGACTTATAAGTTGGGACTAAA 58.123 33.333 18.96 3.59 39.88 1.85
613 947 9.720769 CTTCAGACTTATAAGTTGGGACTAAAA 57.279 33.333 18.96 8.23 39.88 1.52
640 974 6.610741 GTCCTAAGACTTATGAGCCAAATG 57.389 41.667 0.88 0.00 40.10 2.32
641 975 5.008118 GTCCTAAGACTTATGAGCCAAATGC 59.992 44.000 0.88 0.00 40.10 3.56
642 976 4.276926 CCTAAGACTTATGAGCCAAATGCC 59.723 45.833 0.00 0.00 42.71 4.40
643 977 3.659183 AGACTTATGAGCCAAATGCCT 57.341 42.857 0.00 0.00 42.71 4.75
644 978 3.973425 AGACTTATGAGCCAAATGCCTT 58.027 40.909 0.00 0.00 42.71 4.35
645 979 5.116084 AGACTTATGAGCCAAATGCCTTA 57.884 39.130 0.00 0.00 42.71 2.69
646 980 5.509498 AGACTTATGAGCCAAATGCCTTAA 58.491 37.500 0.00 0.00 42.71 1.85
651 985 1.405105 GAGCCAAATGCCTTAATCGCA 59.595 47.619 0.32 0.32 42.71 5.10
702 1036 3.365265 CCCCACGTTTCAGCCAGC 61.365 66.667 0.00 0.00 0.00 4.85
705 1039 2.620112 CCACGTTTCAGCCAGCCAG 61.620 63.158 0.00 0.00 0.00 4.85
706 1040 1.893808 CACGTTTCAGCCAGCCAGT 60.894 57.895 0.00 0.00 0.00 4.00
709 1043 0.957395 CGTTTCAGCCAGCCAGTCAT 60.957 55.000 0.00 0.00 0.00 3.06
710 1044 0.524862 GTTTCAGCCAGCCAGTCATG 59.475 55.000 0.00 0.00 0.00 3.07
711 1045 1.246056 TTTCAGCCAGCCAGTCATGC 61.246 55.000 0.00 0.00 0.00 4.06
712 1046 2.360726 CAGCCAGCCAGTCATGCA 60.361 61.111 0.00 0.00 0.00 3.96
713 1047 2.360852 AGCCAGCCAGTCATGCAC 60.361 61.111 0.00 0.00 0.00 4.57
714 1048 3.807538 GCCAGCCAGTCATGCACG 61.808 66.667 0.00 0.00 0.00 5.34
715 1049 3.807538 CCAGCCAGTCATGCACGC 61.808 66.667 0.00 0.00 0.00 5.34
716 1050 3.051479 CAGCCAGTCATGCACGCA 61.051 61.111 0.00 0.00 0.00 5.24
717 1051 2.745100 AGCCAGTCATGCACGCAG 60.745 61.111 0.00 0.00 0.00 5.18
737 1071 2.667418 CAGGCTCTCACCCACTGG 59.333 66.667 0.00 0.00 37.80 4.00
856 1190 4.724602 CGCCGGCGATCGATCCAT 62.725 66.667 44.86 0.00 42.83 3.41
911 1246 1.429423 GTTGCTATCACCAAGCCGC 59.571 57.895 0.00 0.00 39.30 6.53
912 1247 1.748879 TTGCTATCACCAAGCCGCC 60.749 57.895 0.00 0.00 39.30 6.13
1218 1567 3.712881 GACGCGTGCAACTGGACC 61.713 66.667 20.70 0.00 32.36 4.46
1576 1925 1.603739 GACAACCAGTTCCAGGGCC 60.604 63.158 0.00 0.00 0.00 5.80
1724 2073 4.520846 CAACAATCTCGGCGGCGC 62.521 66.667 28.25 26.17 0.00 6.53
1854 2203 3.243816 TGGCTGCTGCTGGAGTCA 61.244 61.111 15.22 15.22 43.83 3.41
1865 2214 2.172505 TGCTGGAGTCAAACTTCCTCAA 59.827 45.455 0.00 0.00 0.00 3.02
1961 2310 2.746277 GAGCCCGCGGAACAACAT 60.746 61.111 30.73 3.26 0.00 2.71
2317 2666 1.068250 GGGCTCCTCGATCTTTCGG 59.932 63.158 0.00 0.00 45.53 4.30
2343 2692 4.776322 CTCACCGGCGCCATTCCA 62.776 66.667 28.98 4.43 0.00 3.53
2724 3073 1.543429 CGGTCCTTGGAGAATATGGCC 60.543 57.143 0.00 0.00 0.00 5.36
2751 3100 2.683362 GCGGCTTGCTAACTTTTCCTAT 59.317 45.455 0.00 0.00 41.73 2.57
3363 3712 2.887568 GTGCTCCCGCTGATGACG 60.888 66.667 0.00 0.00 36.97 4.35
3648 3997 2.434185 GCCGATCCGTGCAACTCA 60.434 61.111 0.00 0.00 31.75 3.41
3732 4103 7.872163 TTAACAGAAACAAATGCATGATGTC 57.128 32.000 16.24 7.40 0.00 3.06
3954 4331 1.660560 GCACCACCAGCATGACATCC 61.661 60.000 0.00 0.00 39.69 3.51
4100 4483 1.000521 CATGGTGGAGGTGTGCCAT 60.001 57.895 0.00 0.00 41.92 4.40
4247 4630 1.100510 TAGTTCAGCGTCGCCTACAT 58.899 50.000 14.86 0.01 0.00 2.29
4285 4904 5.277601 TGATTTAGCTAGTTTGAACACGC 57.722 39.130 0.00 0.00 0.00 5.34
4288 4907 1.961793 AGCTAGTTTGAACACGCCAA 58.038 45.000 0.00 0.00 0.00 4.52
4289 4908 2.504367 AGCTAGTTTGAACACGCCAAT 58.496 42.857 0.00 0.00 0.00 3.16
4290 4909 3.670625 AGCTAGTTTGAACACGCCAATA 58.329 40.909 0.00 0.00 0.00 1.90
4495 7535 3.033764 GCTGTCGCAAACGGACGA 61.034 61.111 0.00 0.00 40.63 4.20
4529 7572 1.189524 TCCGTCCGTGACCCATTTCT 61.190 55.000 0.00 0.00 0.00 2.52
4532 7575 0.036306 GTCCGTGACCCATTTCTGGT 59.964 55.000 0.00 0.00 41.37 4.00
4548 7591 0.535328 TGGTCCAAATTTGCGTCGGA 60.535 50.000 12.92 1.27 0.00 4.55
4591 7634 3.764466 CGCTCGCCCTTGTCCTCT 61.764 66.667 0.00 0.00 0.00 3.69
4632 7676 1.807814 ACATCCGCTATTCTCCCCTT 58.192 50.000 0.00 0.00 0.00 3.95
4641 7685 0.846693 ATTCTCCCCTTCCCCATTCG 59.153 55.000 0.00 0.00 0.00 3.34
4693 7742 0.820482 TCGTCGTCCACTTCCAGTCA 60.820 55.000 0.00 0.00 0.00 3.41
4782 7836 4.555709 TCTTGCCGGCGTTGGTGT 62.556 61.111 23.90 0.00 0.00 4.16
4791 7845 0.822121 GGCGTTGGTGTCCTCCTTTT 60.822 55.000 0.00 0.00 0.00 2.27
5051 8132 5.250200 AGGATTTTGTGGTTGCGACTATAA 58.750 37.500 3.59 0.00 0.00 0.98
5103 8184 2.628657 CGAGGTTTAGGGGATCGATCTT 59.371 50.000 23.96 12.84 35.47 2.40
5133 8214 3.316588 TCTCCAGCGTTAAATTGCAACAA 59.683 39.130 0.00 0.00 0.00 2.83
5135 8216 4.433615 TCCAGCGTTAAATTGCAACAAAA 58.566 34.783 0.00 0.00 0.00 2.44
5150 8231 1.000274 ACAAAAAGAGCGGACATTGCC 60.000 47.619 0.00 0.00 0.00 4.52
5151 8232 1.270550 CAAAAAGAGCGGACATTGCCT 59.729 47.619 0.00 0.00 0.00 4.75
5152 8233 2.487762 CAAAAAGAGCGGACATTGCCTA 59.512 45.455 0.00 0.00 0.00 3.93
5153 8234 2.029838 AAAGAGCGGACATTGCCTAG 57.970 50.000 0.00 0.00 0.00 3.02
5162 8243 3.430929 CGGACATTGCCTAGCTACTCTTT 60.431 47.826 0.00 0.00 0.00 2.52
5167 8248 0.530870 GCCTAGCTACTCTTTGCCGG 60.531 60.000 0.00 0.00 0.00 6.13
5197 8278 1.374758 GCACGTCCCCACTCTTCTG 60.375 63.158 0.00 0.00 0.00 3.02
5198 8279 1.293498 CACGTCCCCACTCTTCTGG 59.707 63.158 0.00 0.00 0.00 3.86
5201 8282 3.706373 TCCCCACTCTTCTGGCGC 61.706 66.667 0.00 0.00 0.00 6.53
5205 8286 4.749310 CACTCTTCTGGCGCCGCT 62.749 66.667 23.90 0.00 0.00 5.52
5206 8287 4.008933 ACTCTTCTGGCGCCGCTT 62.009 61.111 23.90 0.00 0.00 4.68
5208 8289 4.760047 TCTTCTGGCGCCGCTTCC 62.760 66.667 23.90 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.820744 GACATGCGGGGCCCACAT 62.821 66.667 26.86 22.70 0.00 3.21
4 5 2.830186 TTAACTGACATGCGGGGCCC 62.830 60.000 15.76 15.76 0.00 5.80
5 6 1.377987 TTAACTGACATGCGGGGCC 60.378 57.895 0.00 0.00 0.00 5.80
6 7 1.800681 GTTAACTGACATGCGGGGC 59.199 57.895 0.00 0.00 0.00 5.80
7 8 1.366111 CCGTTAACTGACATGCGGGG 61.366 60.000 3.71 0.00 36.05 5.73
8 9 0.672401 ACCGTTAACTGACATGCGGG 60.672 55.000 3.84 0.00 42.98 6.13
9 10 0.719465 GACCGTTAACTGACATGCGG 59.281 55.000 3.84 0.00 44.10 5.69
10 11 1.424403 TGACCGTTAACTGACATGCG 58.576 50.000 3.84 0.00 0.00 4.73
11 12 3.002862 TGTTTGACCGTTAACTGACATGC 59.997 43.478 3.84 1.62 0.00 4.06
12 13 4.034626 TGTGTTTGACCGTTAACTGACATG 59.965 41.667 3.84 0.00 0.00 3.21
13 14 4.034742 GTGTGTTTGACCGTTAACTGACAT 59.965 41.667 3.84 0.00 0.00 3.06
14 15 3.371591 GTGTGTTTGACCGTTAACTGACA 59.628 43.478 3.84 1.06 0.00 3.58
15 16 3.542680 CGTGTGTTTGACCGTTAACTGAC 60.543 47.826 3.84 0.00 0.00 3.51
16 17 2.604011 CGTGTGTTTGACCGTTAACTGA 59.396 45.455 3.84 0.00 0.00 3.41
17 18 2.285950 CCGTGTGTTTGACCGTTAACTG 60.286 50.000 3.71 0.00 0.00 3.16
18 19 1.935199 CCGTGTGTTTGACCGTTAACT 59.065 47.619 3.71 0.00 0.00 2.24
19 20 1.665169 ACCGTGTGTTTGACCGTTAAC 59.335 47.619 0.00 0.00 0.00 2.01
20 21 1.932511 GACCGTGTGTTTGACCGTTAA 59.067 47.619 0.00 0.00 0.00 2.01
21 22 1.134877 TGACCGTGTGTTTGACCGTTA 60.135 47.619 0.00 0.00 0.00 3.18
22 23 0.391395 TGACCGTGTGTTTGACCGTT 60.391 50.000 0.00 0.00 0.00 4.44
23 24 0.391395 TTGACCGTGTGTTTGACCGT 60.391 50.000 0.00 0.00 0.00 4.83
24 25 0.727970 TTTGACCGTGTGTTTGACCG 59.272 50.000 0.00 0.00 0.00 4.79
25 26 2.011222 TCTTTGACCGTGTGTTTGACC 58.989 47.619 0.00 0.00 0.00 4.02
26 27 2.933906 TCTCTTTGACCGTGTGTTTGAC 59.066 45.455 0.00 0.00 0.00 3.18
27 28 2.933906 GTCTCTTTGACCGTGTGTTTGA 59.066 45.455 0.00 0.00 39.69 2.69
28 29 2.285602 CGTCTCTTTGACCGTGTGTTTG 60.286 50.000 0.00 0.00 42.49 2.93
29 30 1.931172 CGTCTCTTTGACCGTGTGTTT 59.069 47.619 0.00 0.00 42.49 2.83
30 31 1.567504 CGTCTCTTTGACCGTGTGTT 58.432 50.000 0.00 0.00 42.49 3.32
31 32 0.249322 CCGTCTCTTTGACCGTGTGT 60.249 55.000 0.00 0.00 42.49 3.72
32 33 0.031585 TCCGTCTCTTTGACCGTGTG 59.968 55.000 0.00 0.00 42.49 3.82
33 34 0.031721 GTCCGTCTCTTTGACCGTGT 59.968 55.000 0.00 0.00 42.49 4.49
34 35 0.314302 AGTCCGTCTCTTTGACCGTG 59.686 55.000 0.00 0.00 42.49 4.94
35 36 0.314302 CAGTCCGTCTCTTTGACCGT 59.686 55.000 0.00 0.00 42.49 4.83
36 37 0.314302 ACAGTCCGTCTCTTTGACCG 59.686 55.000 0.00 0.00 42.49 4.79
37 38 2.528041 AACAGTCCGTCTCTTTGACC 57.472 50.000 0.00 0.00 42.49 4.02
38 39 3.988517 CCTAAACAGTCCGTCTCTTTGAC 59.011 47.826 0.00 0.00 42.06 3.18
39 40 3.640029 ACCTAAACAGTCCGTCTCTTTGA 59.360 43.478 0.00 0.00 0.00 2.69
40 41 3.741344 CACCTAAACAGTCCGTCTCTTTG 59.259 47.826 0.00 0.00 0.00 2.77
41 42 3.802675 GCACCTAAACAGTCCGTCTCTTT 60.803 47.826 0.00 0.00 0.00 2.52
42 43 2.288886 GCACCTAAACAGTCCGTCTCTT 60.289 50.000 0.00 0.00 0.00 2.85
43 44 1.272769 GCACCTAAACAGTCCGTCTCT 59.727 52.381 0.00 0.00 0.00 3.10
44 45 1.711206 GCACCTAAACAGTCCGTCTC 58.289 55.000 0.00 0.00 0.00 3.36
45 46 0.038526 CGCACCTAAACAGTCCGTCT 60.039 55.000 0.00 0.00 0.00 4.18
46 47 1.012486 CCGCACCTAAACAGTCCGTC 61.012 60.000 0.00 0.00 0.00 4.79
47 48 1.005394 CCGCACCTAAACAGTCCGT 60.005 57.895 0.00 0.00 0.00 4.69
48 49 1.740296 CCCGCACCTAAACAGTCCG 60.740 63.158 0.00 0.00 0.00 4.79
49 50 2.038837 GCCCGCACCTAAACAGTCC 61.039 63.158 0.00 0.00 0.00 3.85
50 51 2.038837 GGCCCGCACCTAAACAGTC 61.039 63.158 0.00 0.00 0.00 3.51
51 52 2.033602 GGCCCGCACCTAAACAGT 59.966 61.111 0.00 0.00 0.00 3.55
52 53 2.750237 GGGCCCGCACCTAAACAG 60.750 66.667 5.69 0.00 0.00 3.16
53 54 4.708386 CGGGCCCGCACCTAAACA 62.708 66.667 34.96 0.00 0.00 2.83
54 55 4.397832 TCGGGCCCGCACCTAAAC 62.398 66.667 39.89 0.00 39.59 2.01
55 56 4.397832 GTCGGGCCCGCACCTAAA 62.398 66.667 39.89 18.28 39.59 1.85
60 61 4.603946 GATAGGTCGGGCCCGCAC 62.604 72.222 39.89 32.95 39.59 5.34
62 63 1.823169 TTATGATAGGTCGGGCCCGC 61.823 60.000 39.89 31.40 39.59 6.13
63 64 0.682852 TTTATGATAGGTCGGGCCCG 59.317 55.000 39.13 39.13 38.26 6.13
64 65 1.418637 TGTTTATGATAGGTCGGGCCC 59.581 52.381 13.57 13.57 38.26 5.80
65 66 2.922740 TGTTTATGATAGGTCGGGCC 57.077 50.000 0.00 0.00 37.58 5.80
66 67 3.740115 ACATGTTTATGATAGGTCGGGC 58.260 45.455 0.00 0.00 37.73 6.13
67 68 7.795482 TTAAACATGTTTATGATAGGTCGGG 57.205 36.000 27.14 0.00 37.73 5.14
89 90 9.956720 CCCAAAATGCATGTTGTTTAAAATTTA 57.043 25.926 24.67 0.00 0.00 1.40
90 91 8.473219 ACCCAAAATGCATGTTGTTTAAAATTT 58.527 25.926 24.67 4.10 0.00 1.82
91 92 8.005192 ACCCAAAATGCATGTTGTTTAAAATT 57.995 26.923 24.67 0.00 0.00 1.82
92 93 7.579761 ACCCAAAATGCATGTTGTTTAAAAT 57.420 28.000 24.67 3.07 0.00 1.82
93 94 7.396540 AACCCAAAATGCATGTTGTTTAAAA 57.603 28.000 24.67 0.00 0.00 1.52
94 95 7.396540 AAACCCAAAATGCATGTTGTTTAAA 57.603 28.000 24.67 0.00 0.00 1.52
95 96 7.337942 AGAAAACCCAAAATGCATGTTGTTTAA 59.662 29.630 24.67 0.00 0.00 1.52
96 97 6.825721 AGAAAACCCAAAATGCATGTTGTTTA 59.174 30.769 24.67 0.00 0.00 2.01
97 98 5.651576 AGAAAACCCAAAATGCATGTTGTTT 59.348 32.000 24.67 18.83 0.00 2.83
98 99 5.066246 CAGAAAACCCAAAATGCATGTTGTT 59.934 36.000 24.67 14.23 0.00 2.83
99 100 4.575645 CAGAAAACCCAAAATGCATGTTGT 59.424 37.500 24.67 8.84 0.00 3.32
100 101 4.815308 TCAGAAAACCCAAAATGCATGTTG 59.185 37.500 20.90 20.90 0.00 3.33
101 102 5.033589 TCAGAAAACCCAAAATGCATGTT 57.966 34.783 0.00 0.00 0.00 2.71
102 103 4.686191 TCAGAAAACCCAAAATGCATGT 57.314 36.364 0.00 0.00 0.00 3.21
103 104 5.296283 TGTTTCAGAAAACCCAAAATGCATG 59.704 36.000 0.00 0.00 43.44 4.06
104 105 5.435291 TGTTTCAGAAAACCCAAAATGCAT 58.565 33.333 0.00 0.00 43.44 3.96
105 106 4.836825 TGTTTCAGAAAACCCAAAATGCA 58.163 34.783 0.00 0.00 43.44 3.96
106 107 4.260743 GCTGTTTCAGAAAACCCAAAATGC 60.261 41.667 0.00 0.00 43.44 3.56
107 108 4.273235 GGCTGTTTCAGAAAACCCAAAATG 59.727 41.667 0.00 0.00 43.44 2.32
108 109 4.080638 TGGCTGTTTCAGAAAACCCAAAAT 60.081 37.500 0.00 0.00 43.44 1.82
109 110 3.261897 TGGCTGTTTCAGAAAACCCAAAA 59.738 39.130 0.00 0.00 43.44 2.44
110 111 2.834549 TGGCTGTTTCAGAAAACCCAAA 59.165 40.909 0.00 0.00 43.44 3.28
111 112 2.461695 TGGCTGTTTCAGAAAACCCAA 58.538 42.857 0.00 0.00 43.44 4.12
112 113 2.151502 TGGCTGTTTCAGAAAACCCA 57.848 45.000 0.00 2.05 43.44 4.51
113 114 2.483013 GGTTGGCTGTTTCAGAAAACCC 60.483 50.000 16.25 0.00 43.44 4.11
114 115 2.167487 TGGTTGGCTGTTTCAGAAAACC 59.833 45.455 18.45 18.45 43.44 3.27
115 116 3.186909 GTGGTTGGCTGTTTCAGAAAAC 58.813 45.455 0.00 4.26 44.18 2.43
116 117 2.167487 GGTGGTTGGCTGTTTCAGAAAA 59.833 45.455 0.00 0.00 32.44 2.29
117 118 1.754226 GGTGGTTGGCTGTTTCAGAAA 59.246 47.619 0.66 0.00 32.44 2.52
118 119 1.398692 GGTGGTTGGCTGTTTCAGAA 58.601 50.000 0.66 0.00 32.44 3.02
119 120 0.467290 GGGTGGTTGGCTGTTTCAGA 60.467 55.000 0.66 0.00 32.44 3.27
120 121 0.754957 TGGGTGGTTGGCTGTTTCAG 60.755 55.000 0.00 0.00 34.12 3.02
121 122 0.105760 ATGGGTGGTTGGCTGTTTCA 60.106 50.000 0.00 0.00 0.00 2.69
122 123 1.047801 AATGGGTGGTTGGCTGTTTC 58.952 50.000 0.00 0.00 0.00 2.78
123 124 1.140652 CAAATGGGTGGTTGGCTGTTT 59.859 47.619 0.00 0.00 0.00 2.83
124 125 0.758123 CAAATGGGTGGTTGGCTGTT 59.242 50.000 0.00 0.00 0.00 3.16
125 126 1.120795 CCAAATGGGTGGTTGGCTGT 61.121 55.000 0.00 0.00 38.04 4.40
126 127 1.672898 CCAAATGGGTGGTTGGCTG 59.327 57.895 0.00 0.00 38.04 4.85
127 128 4.213630 CCAAATGGGTGGTTGGCT 57.786 55.556 0.00 0.00 38.04 4.75
136 137 7.938140 TTTTCTCAGATAACTACCAAATGGG 57.062 36.000 4.17 0.00 44.81 4.00
177 178 6.616577 ACTTTACAGGATAGGGTTCCAAAAA 58.383 36.000 0.00 0.00 38.32 1.94
178 179 6.208840 ACTTTACAGGATAGGGTTCCAAAA 57.791 37.500 0.00 0.00 38.32 2.44
179 180 5.853572 ACTTTACAGGATAGGGTTCCAAA 57.146 39.130 0.00 0.00 38.32 3.28
180 181 6.027482 ACTACTTTACAGGATAGGGTTCCAA 58.973 40.000 0.00 0.00 38.32 3.53
181 182 5.596763 ACTACTTTACAGGATAGGGTTCCA 58.403 41.667 0.00 0.00 38.32 3.53
182 183 6.838090 ACTACTACTTTACAGGATAGGGTTCC 59.162 42.308 0.00 0.00 35.90 3.62
183 184 7.894753 ACTACTACTTTACAGGATAGGGTTC 57.105 40.000 0.00 0.00 0.00 3.62
184 185 8.676397 AAACTACTACTTTACAGGATAGGGTT 57.324 34.615 0.00 0.00 0.00 4.11
185 186 8.676397 AAAACTACTACTTTACAGGATAGGGT 57.324 34.615 0.00 0.00 0.00 4.34
209 210 9.661563 TCTTCGAAAAAGGAGTAAATAGCATAA 57.338 29.630 0.00 0.00 0.00 1.90
210 211 9.661563 TTCTTCGAAAAAGGAGTAAATAGCATA 57.338 29.630 0.00 0.00 0.00 3.14
211 212 8.561738 TTCTTCGAAAAAGGAGTAAATAGCAT 57.438 30.769 0.00 0.00 0.00 3.79
212 213 7.972832 TTCTTCGAAAAAGGAGTAAATAGCA 57.027 32.000 0.00 0.00 0.00 3.49
220 221 8.350722 GGTCTTTTAATTCTTCGAAAAAGGAGT 58.649 33.333 14.54 0.00 38.73 3.85
221 222 8.349983 TGGTCTTTTAATTCTTCGAAAAAGGAG 58.650 33.333 14.54 2.68 38.73 3.69
222 223 8.228035 TGGTCTTTTAATTCTTCGAAAAAGGA 57.772 30.769 14.54 8.36 38.73 3.36
238 239 9.967346 CATTACTCTCGAGAATATGGTCTTTTA 57.033 33.333 17.36 0.00 0.00 1.52
306 307 6.912561 AGGAGTAGGGGGAGACAATAAAATTA 59.087 38.462 0.00 0.00 0.00 1.40
309 310 4.706616 AGGAGTAGGGGGAGACAATAAAA 58.293 43.478 0.00 0.00 0.00 1.52
313 314 1.062044 GGAGGAGTAGGGGGAGACAAT 60.062 57.143 0.00 0.00 0.00 2.71
315 316 0.854039 TGGAGGAGTAGGGGGAGACA 60.854 60.000 0.00 0.00 0.00 3.41
353 687 4.250464 CAAACACCCTCTAATTAGCGTCA 58.750 43.478 7.67 0.00 0.00 4.35
366 700 2.024369 AGTCCCTGAAAACAAACACCCT 60.024 45.455 0.00 0.00 0.00 4.34
367 701 2.384828 AGTCCCTGAAAACAAACACCC 58.615 47.619 0.00 0.00 0.00 4.61
368 702 5.784578 ATAAGTCCCTGAAAACAAACACC 57.215 39.130 0.00 0.00 0.00 4.16
369 703 5.983118 CCAATAAGTCCCTGAAAACAAACAC 59.017 40.000 0.00 0.00 0.00 3.32
370 704 5.894393 TCCAATAAGTCCCTGAAAACAAACA 59.106 36.000 0.00 0.00 0.00 2.83
371 705 6.399639 TCCAATAAGTCCCTGAAAACAAAC 57.600 37.500 0.00 0.00 0.00 2.93
372 706 7.610580 AATCCAATAAGTCCCTGAAAACAAA 57.389 32.000 0.00 0.00 0.00 2.83
373 707 7.396055 CCTAATCCAATAAGTCCCTGAAAACAA 59.604 37.037 0.00 0.00 0.00 2.83
374 708 6.889722 CCTAATCCAATAAGTCCCTGAAAACA 59.110 38.462 0.00 0.00 0.00 2.83
375 709 6.321435 CCCTAATCCAATAAGTCCCTGAAAAC 59.679 42.308 0.00 0.00 0.00 2.43
376 710 6.218730 TCCCTAATCCAATAAGTCCCTGAAAA 59.781 38.462 0.00 0.00 0.00 2.29
377 711 5.734140 TCCCTAATCCAATAAGTCCCTGAAA 59.266 40.000 0.00 0.00 0.00 2.69
378 712 5.132144 GTCCCTAATCCAATAAGTCCCTGAA 59.868 44.000 0.00 0.00 0.00 3.02
379 713 4.658901 GTCCCTAATCCAATAAGTCCCTGA 59.341 45.833 0.00 0.00 0.00 3.86
380 714 4.660771 AGTCCCTAATCCAATAAGTCCCTG 59.339 45.833 0.00 0.00 0.00 4.45
381 715 4.909284 AGTCCCTAATCCAATAAGTCCCT 58.091 43.478 0.00 0.00 0.00 4.20
382 716 5.648330 AAGTCCCTAATCCAATAAGTCCC 57.352 43.478 0.00 0.00 0.00 4.46
383 717 9.470399 TTTTTAAGTCCCTAATCCAATAAGTCC 57.530 33.333 0.00 0.00 0.00 3.85
407 741 9.682465 GTTTAGATGGGACTTATAGGAACTTTT 57.318 33.333 0.00 0.00 41.75 2.27
408 742 8.272889 GGTTTAGATGGGACTTATAGGAACTTT 58.727 37.037 0.00 0.00 41.75 2.66
409 743 7.404980 TGGTTTAGATGGGACTTATAGGAACTT 59.595 37.037 0.00 0.00 41.75 2.66
410 744 6.906901 TGGTTTAGATGGGACTTATAGGAACT 59.093 38.462 0.00 0.00 46.37 3.01
411 745 7.133133 TGGTTTAGATGGGACTTATAGGAAC 57.867 40.000 0.00 0.00 0.00 3.62
412 746 7.758820 TTGGTTTAGATGGGACTTATAGGAA 57.241 36.000 0.00 0.00 0.00 3.36
413 747 7.183112 TGTTTGGTTTAGATGGGACTTATAGGA 59.817 37.037 0.00 0.00 0.00 2.94
414 748 7.343357 TGTTTGGTTTAGATGGGACTTATAGG 58.657 38.462 0.00 0.00 0.00 2.57
415 749 7.499232 CCTGTTTGGTTTAGATGGGACTTATAG 59.501 40.741 0.00 0.00 0.00 1.31
416 750 7.183112 TCCTGTTTGGTTTAGATGGGACTTATA 59.817 37.037 0.00 0.00 37.07 0.98
417 751 6.011981 TCCTGTTTGGTTTAGATGGGACTTAT 60.012 38.462 0.00 0.00 37.07 1.73
418 752 5.311121 TCCTGTTTGGTTTAGATGGGACTTA 59.689 40.000 0.00 0.00 37.07 2.24
419 753 4.105697 TCCTGTTTGGTTTAGATGGGACTT 59.894 41.667 0.00 0.00 37.07 3.01
420 754 3.655777 TCCTGTTTGGTTTAGATGGGACT 59.344 43.478 0.00 0.00 37.07 3.85
421 755 4.028993 TCCTGTTTGGTTTAGATGGGAC 57.971 45.455 0.00 0.00 37.07 4.46
422 756 4.508405 CCTTCCTGTTTGGTTTAGATGGGA 60.508 45.833 0.00 0.00 37.07 4.37
423 757 3.763897 CCTTCCTGTTTGGTTTAGATGGG 59.236 47.826 0.00 0.00 37.07 4.00
424 758 4.459337 GTCCTTCCTGTTTGGTTTAGATGG 59.541 45.833 0.00 0.00 37.07 3.51
425 759 5.316987 AGTCCTTCCTGTTTGGTTTAGATG 58.683 41.667 0.00 0.00 37.07 2.90
426 760 5.584551 AGTCCTTCCTGTTTGGTTTAGAT 57.415 39.130 0.00 0.00 37.07 1.98
427 761 5.382664 AAGTCCTTCCTGTTTGGTTTAGA 57.617 39.130 0.00 0.00 37.07 2.10
428 762 8.319146 TCTATAAGTCCTTCCTGTTTGGTTTAG 58.681 37.037 0.00 0.00 37.07 1.85
429 763 8.209802 TCTATAAGTCCTTCCTGTTTGGTTTA 57.790 34.615 0.00 0.00 37.07 2.01
430 764 7.017254 TCTCTATAAGTCCTTCCTGTTTGGTTT 59.983 37.037 0.00 0.00 37.07 3.27
431 765 6.500751 TCTCTATAAGTCCTTCCTGTTTGGTT 59.499 38.462 0.00 0.00 37.07 3.67
432 766 6.023603 TCTCTATAAGTCCTTCCTGTTTGGT 58.976 40.000 0.00 0.00 37.07 3.67
433 767 6.155393 AGTCTCTATAAGTCCTTCCTGTTTGG 59.845 42.308 0.00 0.00 37.10 3.28
434 768 7.176589 AGTCTCTATAAGTCCTTCCTGTTTG 57.823 40.000 0.00 0.00 0.00 2.93
435 769 7.800300 AAGTCTCTATAAGTCCTTCCTGTTT 57.200 36.000 0.00 0.00 0.00 2.83
436 770 8.896722 TTAAGTCTCTATAAGTCCTTCCTGTT 57.103 34.615 0.00 0.00 0.00 3.16
437 771 8.896722 TTTAAGTCTCTATAAGTCCTTCCTGT 57.103 34.615 0.00 0.00 0.00 4.00
438 772 8.973182 ACTTTAAGTCTCTATAAGTCCTTCCTG 58.027 37.037 0.00 0.00 0.00 3.86
439 773 8.973182 CACTTTAAGTCTCTATAAGTCCTTCCT 58.027 37.037 0.00 0.00 0.00 3.36
440 774 8.198778 CCACTTTAAGTCTCTATAAGTCCTTCC 58.801 40.741 0.00 0.00 0.00 3.46
441 775 8.198778 CCCACTTTAAGTCTCTATAAGTCCTTC 58.801 40.741 0.00 0.00 0.00 3.46
442 776 7.364851 GCCCACTTTAAGTCTCTATAAGTCCTT 60.365 40.741 0.00 0.00 0.00 3.36
443 777 6.098552 GCCCACTTTAAGTCTCTATAAGTCCT 59.901 42.308 0.00 0.00 0.00 3.85
444 778 6.127140 TGCCCACTTTAAGTCTCTATAAGTCC 60.127 42.308 0.00 0.00 0.00 3.85
445 779 6.875076 TGCCCACTTTAAGTCTCTATAAGTC 58.125 40.000 0.00 0.00 0.00 3.01
446 780 6.869206 TGCCCACTTTAAGTCTCTATAAGT 57.131 37.500 0.00 0.00 0.00 2.24
447 781 8.616076 CAAATGCCCACTTTAAGTCTCTATAAG 58.384 37.037 0.00 0.00 0.00 1.73
448 782 7.556275 CCAAATGCCCACTTTAAGTCTCTATAA 59.444 37.037 0.00 0.00 0.00 0.98
449 783 7.054124 CCAAATGCCCACTTTAAGTCTCTATA 58.946 38.462 0.00 0.00 0.00 1.31
450 784 5.888161 CCAAATGCCCACTTTAAGTCTCTAT 59.112 40.000 0.00 0.00 0.00 1.98
451 785 5.253330 CCAAATGCCCACTTTAAGTCTCTA 58.747 41.667 0.00 0.00 0.00 2.43
452 786 4.082125 CCAAATGCCCACTTTAAGTCTCT 58.918 43.478 0.00 0.00 0.00 3.10
453 787 3.193479 CCCAAATGCCCACTTTAAGTCTC 59.807 47.826 0.00 0.00 0.00 3.36
454 788 3.165071 CCCAAATGCCCACTTTAAGTCT 58.835 45.455 0.00 0.00 0.00 3.24
455 789 3.056821 GTCCCAAATGCCCACTTTAAGTC 60.057 47.826 0.00 0.00 0.00 3.01
456 790 2.897326 GTCCCAAATGCCCACTTTAAGT 59.103 45.455 0.00 0.00 0.00 2.24
457 791 3.165071 AGTCCCAAATGCCCACTTTAAG 58.835 45.455 0.00 0.00 0.00 1.85
458 792 3.252554 AGTCCCAAATGCCCACTTTAA 57.747 42.857 0.00 0.00 0.00 1.52
459 793 2.990740 AGTCCCAAATGCCCACTTTA 57.009 45.000 0.00 0.00 0.00 1.85
460 794 2.101640 AAGTCCCAAATGCCCACTTT 57.898 45.000 0.00 0.00 0.00 2.66
461 795 2.990740 TAAGTCCCAAATGCCCACTT 57.009 45.000 0.00 0.00 0.00 3.16
462 796 2.311542 TCATAAGTCCCAAATGCCCACT 59.688 45.455 0.00 0.00 0.00 4.00
463 797 2.733956 TCATAAGTCCCAAATGCCCAC 58.266 47.619 0.00 0.00 0.00 4.61
464 798 3.464720 TTCATAAGTCCCAAATGCCCA 57.535 42.857 0.00 0.00 0.00 5.36
465 799 6.323739 TCTTATTTCATAAGTCCCAAATGCCC 59.676 38.462 3.93 0.00 42.21 5.36
466 800 7.068716 AGTCTTATTTCATAAGTCCCAAATGCC 59.931 37.037 3.93 0.00 42.21 4.40
467 801 8.000780 AGTCTTATTTCATAAGTCCCAAATGC 57.999 34.615 3.93 0.00 42.21 3.56
468 802 9.401058 AGAGTCTTATTTCATAAGTCCCAAATG 57.599 33.333 3.93 0.00 42.21 2.32
469 803 9.981460 AAGAGTCTTATTTCATAAGTCCCAAAT 57.019 29.630 2.75 0.00 42.21 2.32
473 807 9.549078 CCTTAAGAGTCTTATTTCATAAGTCCC 57.451 37.037 13.34 0.00 42.21 4.46
477 811 9.771534 CCCTCCTTAAGAGTCTTATTTCATAAG 57.228 37.037 13.34 7.71 41.47 1.73
478 812 9.502035 TCCCTCCTTAAGAGTCTTATTTCATAA 57.498 33.333 13.34 0.00 41.47 1.90
479 813 8.925338 GTCCCTCCTTAAGAGTCTTATTTCATA 58.075 37.037 13.34 0.00 41.47 2.15
480 814 7.625682 AGTCCCTCCTTAAGAGTCTTATTTCAT 59.374 37.037 13.34 0.00 41.47 2.57
481 815 6.960542 AGTCCCTCCTTAAGAGTCTTATTTCA 59.039 38.462 13.34 0.00 41.47 2.69
482 816 7.426606 AGTCCCTCCTTAAGAGTCTTATTTC 57.573 40.000 13.34 0.47 41.47 2.17
483 817 7.816300 AAGTCCCTCCTTAAGAGTCTTATTT 57.184 36.000 13.34 0.00 41.47 1.40
485 819 9.816787 CTATAAGTCCCTCCTTAAGAGTCTTAT 57.183 37.037 13.34 10.38 41.47 1.73
486 820 8.226112 CCTATAAGTCCCTCCTTAAGAGTCTTA 58.774 40.741 8.59 8.59 41.47 2.10
487 821 7.070629 CCTATAAGTCCCTCCTTAAGAGTCTT 58.929 42.308 10.87 10.87 41.47 3.01
488 822 6.412259 CCCTATAAGTCCCTCCTTAAGAGTCT 60.412 46.154 3.36 0.00 41.47 3.24
489 823 5.776208 CCCTATAAGTCCCTCCTTAAGAGTC 59.224 48.000 3.36 0.00 41.47 3.36
490 824 5.439059 TCCCTATAAGTCCCTCCTTAAGAGT 59.561 44.000 3.36 0.00 41.47 3.24
491 825 5.776208 GTCCCTATAAGTCCCTCCTTAAGAG 59.224 48.000 3.36 0.00 42.83 2.85
492 826 5.439059 AGTCCCTATAAGTCCCTCCTTAAGA 59.561 44.000 3.36 0.00 31.09 2.10
493 827 5.718039 AGTCCCTATAAGTCCCTCCTTAAG 58.282 45.833 0.00 0.00 31.09 1.85
494 828 5.763239 AGTCCCTATAAGTCCCTCCTTAA 57.237 43.478 0.00 0.00 31.09 1.85
495 829 5.763239 AAGTCCCTATAAGTCCCTCCTTA 57.237 43.478 0.00 0.00 0.00 2.69
496 830 4.645968 AAGTCCCTATAAGTCCCTCCTT 57.354 45.455 0.00 0.00 0.00 3.36
497 831 5.970692 ATAAGTCCCTATAAGTCCCTCCT 57.029 43.478 0.00 0.00 0.00 3.69
498 832 6.803017 ACTATAAGTCCCTATAAGTCCCTCC 58.197 44.000 0.00 0.00 0.00 4.30
499 833 7.729431 ACAACTATAAGTCCCTATAAGTCCCTC 59.271 40.741 0.00 0.00 0.00 4.30
500 834 7.602868 ACAACTATAAGTCCCTATAAGTCCCT 58.397 38.462 0.00 0.00 0.00 4.20
501 835 7.852550 ACAACTATAAGTCCCTATAAGTCCC 57.147 40.000 0.00 0.00 0.00 4.46
509 843 9.664777 ACACCATATTACAACTATAAGTCCCTA 57.335 33.333 0.00 0.00 0.00 3.53
510 844 8.562949 ACACCATATTACAACTATAAGTCCCT 57.437 34.615 0.00 0.00 0.00 4.20
528 862 8.480501 GGACTTACAAGTTCCTATAACACCATA 58.519 37.037 0.00 0.00 39.88 2.74
529 863 7.336396 GGACTTACAAGTTCCTATAACACCAT 58.664 38.462 0.00 0.00 39.88 3.55
530 864 6.704310 GGACTTACAAGTTCCTATAACACCA 58.296 40.000 0.00 0.00 39.88 4.17
541 875 3.181448 TGGTTCCTGGGACTTACAAGTTC 60.181 47.826 4.84 0.00 39.88 3.01
542 876 2.781174 TGGTTCCTGGGACTTACAAGTT 59.219 45.455 4.84 0.00 39.88 2.66
543 877 2.414612 TGGTTCCTGGGACTTACAAGT 58.585 47.619 4.84 0.00 43.16 3.16
544 878 3.502123 TTGGTTCCTGGGACTTACAAG 57.498 47.619 4.84 0.00 0.00 3.16
545 879 3.558033 GTTTGGTTCCTGGGACTTACAA 58.442 45.455 4.84 0.00 0.00 2.41
546 880 2.485835 CGTTTGGTTCCTGGGACTTACA 60.486 50.000 4.84 0.00 0.00 2.41
547 881 2.148768 CGTTTGGTTCCTGGGACTTAC 58.851 52.381 4.84 0.42 0.00 2.34
548 882 1.072648 CCGTTTGGTTCCTGGGACTTA 59.927 52.381 4.84 0.00 0.00 2.24
549 883 0.179001 CCGTTTGGTTCCTGGGACTT 60.179 55.000 4.84 0.00 0.00 3.01
550 884 1.454539 CCGTTTGGTTCCTGGGACT 59.545 57.895 4.84 0.00 0.00 3.85
551 885 1.602605 CCCGTTTGGTTCCTGGGAC 60.603 63.158 0.00 0.00 42.77 4.46
552 886 2.840576 CCCGTTTGGTTCCTGGGA 59.159 61.111 0.00 0.00 42.77 4.37
561 895 2.281539 AAAAGTCCCTACCCGTTTGG 57.718 50.000 0.00 0.00 41.37 3.28
562 896 4.216902 CCTTAAAAAGTCCCTACCCGTTTG 59.783 45.833 0.00 0.00 0.00 2.93
563 897 4.104579 TCCTTAAAAAGTCCCTACCCGTTT 59.895 41.667 0.00 0.00 0.00 3.60
564 898 3.652387 TCCTTAAAAAGTCCCTACCCGTT 59.348 43.478 0.00 0.00 0.00 4.44
565 899 3.008375 GTCCTTAAAAAGTCCCTACCCGT 59.992 47.826 0.00 0.00 0.00 5.28
566 900 3.262660 AGTCCTTAAAAAGTCCCTACCCG 59.737 47.826 0.00 0.00 0.00 5.28
567 901 4.923516 AGTCCTTAAAAAGTCCCTACCC 57.076 45.455 0.00 0.00 0.00 3.69
568 902 5.872963 TGAAGTCCTTAAAAAGTCCCTACC 58.127 41.667 0.00 0.00 0.00 3.18
569 903 6.649973 GTCTGAAGTCCTTAAAAAGTCCCTAC 59.350 42.308 0.00 0.00 0.00 3.18
570 904 6.557633 AGTCTGAAGTCCTTAAAAAGTCCCTA 59.442 38.462 0.00 0.00 0.00 3.53
571 905 5.369993 AGTCTGAAGTCCTTAAAAAGTCCCT 59.630 40.000 0.00 0.00 0.00 4.20
572 906 5.622180 AGTCTGAAGTCCTTAAAAAGTCCC 58.378 41.667 0.00 0.00 0.00 4.46
573 907 8.850007 ATAAGTCTGAAGTCCTTAAAAAGTCC 57.150 34.615 0.00 0.00 0.00 3.85
579 913 9.720769 CCAACTTATAAGTCTGAAGTCCTTAAA 57.279 33.333 18.28 0.00 38.57 1.52
580 914 8.319146 CCCAACTTATAAGTCTGAAGTCCTTAA 58.681 37.037 18.28 0.00 38.57 1.85
581 915 7.676893 TCCCAACTTATAAGTCTGAAGTCCTTA 59.323 37.037 18.28 0.00 38.57 2.69
582 916 6.500751 TCCCAACTTATAAGTCTGAAGTCCTT 59.499 38.462 18.28 0.00 38.57 3.36
583 917 6.023603 TCCCAACTTATAAGTCTGAAGTCCT 58.976 40.000 18.28 0.00 38.57 3.85
584 918 6.070710 AGTCCCAACTTATAAGTCTGAAGTCC 60.071 42.308 18.28 4.54 38.57 3.85
585 919 6.937392 AGTCCCAACTTATAAGTCTGAAGTC 58.063 40.000 18.28 10.64 38.57 3.01
586 920 6.936968 AGTCCCAACTTATAAGTCTGAAGT 57.063 37.500 18.28 5.74 38.57 3.01
587 921 9.720769 TTTTAGTCCCAACTTATAAGTCTGAAG 57.279 33.333 18.28 12.38 38.57 3.02
616 950 7.132869 GCATTTGGCTCATAAGTCTTAGGACT 61.133 42.308 0.82 0.82 46.32 3.85
617 951 5.008118 GCATTTGGCTCATAAGTCTTAGGAC 59.992 44.000 2.85 0.00 40.08 3.85
618 952 5.126067 GCATTTGGCTCATAAGTCTTAGGA 58.874 41.667 6.77 6.77 40.25 2.94
619 953 4.276926 GGCATTTGGCTCATAAGTCTTAGG 59.723 45.833 0.00 0.00 44.01 2.69
620 954 5.429957 GGCATTTGGCTCATAAGTCTTAG 57.570 43.478 0.00 0.00 44.01 2.18
639 973 1.795768 GATCGGATGCGATTAAGGCA 58.204 50.000 23.42 6.46 45.71 4.75
640 974 0.716108 CGATCGGATGCGATTAAGGC 59.284 55.000 23.42 9.20 0.00 4.35
641 975 2.347697 TCGATCGGATGCGATTAAGG 57.652 50.000 23.42 12.86 0.00 2.69
642 976 2.527887 CGATCGATCGGATGCGATTAAG 59.472 50.000 34.54 16.81 46.13 1.85
643 977 2.515912 CGATCGATCGGATGCGATTAA 58.484 47.619 34.54 14.49 46.13 1.40
644 978 2.174060 CGATCGATCGGATGCGATTA 57.826 50.000 34.54 14.84 46.13 1.75
645 979 3.021541 CGATCGATCGGATGCGATT 57.978 52.632 34.54 7.83 46.13 3.34
702 1036 4.156622 CGCTGCGTGCATGACTGG 62.157 66.667 14.93 0.00 43.06 4.00
854 1188 3.501950 GGGTTTTAAAGAAGCAGCGATG 58.498 45.455 0.00 0.00 0.00 3.84
855 1189 2.492088 GGGGTTTTAAAGAAGCAGCGAT 59.508 45.455 0.00 0.00 0.00 4.58
856 1190 1.883926 GGGGTTTTAAAGAAGCAGCGA 59.116 47.619 0.00 0.00 0.00 4.93
858 1192 1.668919 GCGGGGTTTTAAAGAAGCAGC 60.669 52.381 0.00 0.00 0.00 5.25
860 1194 0.594110 CGCGGGGTTTTAAAGAAGCA 59.406 50.000 0.00 0.00 0.00 3.91
861 1195 0.731514 GCGCGGGGTTTTAAAGAAGC 60.732 55.000 8.83 0.00 0.00 3.86
863 1197 0.594110 CAGCGCGGGGTTTTAAAGAA 59.406 50.000 8.83 0.00 0.00 2.52
911 1246 1.526917 CGGAGCTAGGCAAATGGGG 60.527 63.158 0.00 0.00 0.00 4.96
912 1247 0.109342 ATCGGAGCTAGGCAAATGGG 59.891 55.000 0.00 0.00 0.00 4.00
1041 1390 2.831526 GAGGAAGAGGAAGAAGCTGAGT 59.168 50.000 0.00 0.00 0.00 3.41
1524 1873 3.382803 CTTCAGCCGGGAGAGCCTG 62.383 68.421 2.18 0.00 40.49 4.85
1526 1875 4.847444 GCTTCAGCCGGGAGAGCC 62.847 72.222 2.18 0.00 34.31 4.70
1601 1950 3.886001 GGTATTCCAGGCCCCGGG 61.886 72.222 15.80 15.80 0.00 5.73
1606 1955 0.919710 AGGTTGAGGTATTCCAGGCC 59.080 55.000 0.00 0.00 35.89 5.19
1854 2203 1.228657 GCTCGCCGTTGAGGAAGTTT 61.229 55.000 3.67 0.00 45.00 2.66
1911 2260 0.889306 ACGACAGGTACAGAAGCTCC 59.111 55.000 0.00 0.00 32.16 4.70
2232 2581 0.954452 GGTTGTTTGAGAGGTGCAGG 59.046 55.000 0.00 0.00 0.00 4.85
2264 2613 3.974757 CGAGGGACGGCGGGATAC 61.975 72.222 13.24 0.00 38.46 2.24
2317 2666 2.435059 GCCGGTGAGCTGGTTCTC 60.435 66.667 1.90 0.00 43.16 2.87
2343 2692 2.433145 CACTGCACGATGCTCGGT 60.433 61.111 10.54 5.30 45.59 4.69
2696 3045 4.785453 CCAAGGACCGAGGCAGGC 62.785 72.222 0.00 0.00 33.69 4.85
2724 3073 2.815211 TTAGCAAGCCGCAGCGAG 60.815 61.111 18.75 7.72 46.67 5.03
2893 3242 3.055719 CCGCCGGTTGTGAAGCAT 61.056 61.111 1.90 0.00 0.00 3.79
3363 3712 2.202676 CTCTCGAGGCTGCCGTTC 60.203 66.667 13.96 5.38 0.00 3.95
3648 3997 1.176527 CCTGCAACAATCCGGTGATT 58.823 50.000 0.00 0.00 41.96 2.57
3666 4015 3.462199 GATGTAGCCCACGGAGCCC 62.462 68.421 0.00 0.00 0.00 5.19
3732 4103 0.386858 TGAAGAGAAGAACGTCGGCG 60.387 55.000 8.42 8.42 44.93 6.46
3981 4358 2.798689 CGAGAACATCGCCTCCGA 59.201 61.111 0.00 0.00 45.98 4.55
4028 4411 2.359404 ACCCCGAGGTCGATCAGT 59.641 61.111 0.00 0.00 46.45 3.41
4100 4483 1.045350 CCTTGAGGAGGGCGATCTCA 61.045 60.000 7.55 0.00 42.26 3.27
4148 4531 0.671472 CAGTCATCGCCACTGAAGCA 60.671 55.000 2.95 0.00 43.54 3.91
4151 4534 4.284123 GCAGTCATCGCCACTGAA 57.716 55.556 11.17 0.00 43.54 3.02
4529 7572 0.535328 TCCGACGCAAATTTGGACCA 60.535 50.000 19.47 0.00 0.00 4.02
4532 7575 2.924454 GCAAATCCGACGCAAATTTGGA 60.924 45.455 19.47 8.37 39.59 3.53
4548 7591 3.419759 GTCCGCACCGACGCAAAT 61.420 61.111 0.00 0.00 0.00 2.32
4612 7656 2.696526 AGGGGAGAATAGCGGATGTA 57.303 50.000 0.00 0.00 0.00 2.29
4693 7742 1.003718 GCCTGGGCAACGTCTAACT 60.004 57.895 6.75 0.00 41.49 2.24
4782 7836 1.302511 GACTGCGGCAAAAGGAGGA 60.303 57.895 3.44 0.00 0.00 3.71
4787 7841 0.804364 TGCTATGACTGCGGCAAAAG 59.196 50.000 3.44 0.00 0.00 2.27
4791 7845 2.125147 GGTGCTATGACTGCGGCA 60.125 61.111 1.29 1.29 0.00 5.69
4971 8037 5.476983 AGAACTCATCCCCACTATCCATTA 58.523 41.667 0.00 0.00 0.00 1.90
5051 8132 5.371526 CCTAGCTATGTGGTCATTGACAAT 58.628 41.667 18.09 10.63 35.70 2.71
5103 8184 1.558167 TAACGCTGGAGAATGGCCCA 61.558 55.000 0.00 0.00 0.00 5.36
5133 8214 2.359900 CTAGGCAATGTCCGCTCTTTT 58.640 47.619 0.00 0.00 0.00 2.27
5135 8216 0.462759 GCTAGGCAATGTCCGCTCTT 60.463 55.000 0.00 0.00 0.00 2.85
5150 8231 2.674796 AACCGGCAAAGAGTAGCTAG 57.325 50.000 0.00 0.00 0.00 3.42
5151 8232 3.094572 AGTAACCGGCAAAGAGTAGCTA 58.905 45.455 0.00 0.00 0.00 3.32
5152 8233 1.900486 AGTAACCGGCAAAGAGTAGCT 59.100 47.619 0.00 0.00 0.00 3.32
5153 8234 2.381725 AGTAACCGGCAAAGAGTAGC 57.618 50.000 0.00 0.00 0.00 3.58
5167 8248 0.509929 GGACGTGCACCGAAAGTAAC 59.490 55.000 12.15 0.00 40.70 2.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.