Multiple sequence alignment - TraesCS7B01G054400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G054400 chr7B 100.000 5551 0 0 1 5551 57586981 57592531 0.000000e+00 10251.0
1 TraesCS7B01G054400 chr7B 95.699 93 4 0 5274 5366 110916340 110916432 3.460000e-32 150.0
2 TraesCS7B01G054400 chr7B 97.436 78 2 0 1 78 57580125 57580202 3.490000e-27 134.0
3 TraesCS7B01G054400 chr7A 92.928 3436 165 36 1789 5188 103151368 103154761 0.000000e+00 4927.0
4 TraesCS7B01G054400 chr7A 83.501 697 36 29 838 1485 103150406 103151072 1.340000e-160 577.0
5 TraesCS7B01G054400 chr7A 93.085 188 6 2 5364 5551 103154868 103155048 9.170000e-68 268.0
6 TraesCS7B01G054400 chr7A 95.604 91 4 0 5276 5366 683095454 683095544 4.480000e-31 147.0
7 TraesCS7B01G054400 chr7A 94.667 75 4 0 1511 1585 103151291 103151365 3.510000e-22 117.0
8 TraesCS7B01G054400 chr7A 87.952 83 8 2 5113 5194 598347861 598347942 4.580000e-16 97.1
9 TraesCS7B01G054400 chr7D 91.904 1334 84 17 3959 5277 101087259 101088583 0.000000e+00 1844.0
10 TraesCS7B01G054400 chr7D 93.367 995 57 6 1658 2651 101085077 101086063 0.000000e+00 1463.0
11 TraesCS7B01G054400 chr7D 95.192 624 23 4 3080 3702 101086548 101087165 0.000000e+00 979.0
12 TraesCS7B01G054400 chr7D 87.589 564 28 10 831 1355 101084286 101084846 2.840000e-172 616.0
13 TraesCS7B01G054400 chr7D 89.506 324 29 2 2682 3001 101086060 101086382 6.700000e-109 405.0
14 TraesCS7B01G054400 chr7D 92.553 188 7 3 5364 5551 101088585 101088765 4.260000e-66 263.0
15 TraesCS7B01G054400 chr7D 95.402 87 4 0 1511 1597 101085010 101085096 7.500000e-29 139.0
16 TraesCS7B01G054400 chr7D 96.341 82 3 0 3000 3081 101086430 101086511 9.700000e-28 135.0
17 TraesCS7B01G054400 chr7D 95.890 73 3 0 3839 3911 101087187 101087259 9.770000e-23 119.0
18 TraesCS7B01G054400 chr7D 98.387 62 1 0 1 62 417912646 417912707 5.880000e-20 110.0
19 TraesCS7B01G054400 chr7D 98.387 62 1 0 1 62 446216353 446216414 5.880000e-20 110.0
20 TraesCS7B01G054400 chr2D 93.488 645 31 4 62 695 645665723 645666367 0.000000e+00 948.0
21 TraesCS7B01G054400 chr2D 96.296 81 3 0 1603 1683 586574665 586574585 3.490000e-27 134.0
22 TraesCS7B01G054400 chr2D 96.154 78 3 0 1600 1677 451974406 451974329 1.620000e-25 128.0
23 TraesCS7B01G054400 chr2D 98.387 62 1 0 1 62 336009397 336009458 5.880000e-20 110.0
24 TraesCS7B01G054400 chr1A 92.969 640 41 2 60 695 491375893 491376532 0.000000e+00 929.0
25 TraesCS7B01G054400 chr3D 92.857 644 38 4 60 695 56361948 56362591 0.000000e+00 928.0
26 TraesCS7B01G054400 chr3D 92.668 641 42 2 60 695 85594261 85594901 0.000000e+00 918.0
27 TraesCS7B01G054400 chr3D 92.668 641 42 3 60 695 597289003 597288363 0.000000e+00 918.0
28 TraesCS7B01G054400 chr3B 92.969 640 40 3 60 695 12765709 12765071 0.000000e+00 928.0
29 TraesCS7B01G054400 chr3B 100.000 62 0 0 1 62 477654939 477655000 1.260000e-21 115.0
30 TraesCS7B01G054400 chr3B 100.000 62 0 0 1 62 778386431 778386370 1.260000e-21 115.0
31 TraesCS7B01G054400 chr6D 92.801 639 42 2 60 695 15694684 15694047 0.000000e+00 922.0
32 TraesCS7B01G054400 chr6D 92.857 56 2 2 705 759 457305413 457305467 4.610000e-11 80.5
33 TraesCS7B01G054400 chr4A 92.668 641 41 3 60 695 69305469 69306108 0.000000e+00 918.0
34 TraesCS7B01G054400 chr4A 93.976 83 4 1 1597 1679 598725654 598725735 2.100000e-24 124.0
35 TraesCS7B01G054400 chr4A 92.045 88 4 3 1600 1685 141112004 141111918 2.720000e-23 121.0
36 TraesCS7B01G054400 chr1B 92.668 641 42 2 60 695 453522605 453521965 0.000000e+00 918.0
37 TraesCS7B01G054400 chr1B 92.857 84 5 1 1595 1677 397816061 397815978 2.720000e-23 121.0
38 TraesCS7B01G054400 chr1B 98.387 62 1 0 1 62 622483616 622483677 5.880000e-20 110.0
39 TraesCS7B01G054400 chr5D 95.652 92 4 0 5275 5366 494688263 494688354 1.250000e-31 148.0
40 TraesCS7B01G054400 chr6A 93.617 94 6 0 5275 5368 594612886 594612793 2.080000e-29 141.0
41 TraesCS7B01G054400 chr5B 96.203 79 3 0 1603 1681 437570754 437570676 4.510000e-26 130.0
42 TraesCS7B01G054400 chr1D 92.308 91 6 1 1596 1685 28961006 28960916 1.620000e-25 128.0
43 TraesCS7B01G054400 chr1D 82.407 108 17 2 5104 5210 453461274 453461380 5.920000e-15 93.5
44 TraesCS7B01G054400 chr4B 95.000 80 4 0 1602 1681 368857340 368857261 5.840000e-25 126.0
45 TraesCS7B01G054400 chr4B 98.387 62 1 0 1 62 536012979 536012918 5.880000e-20 110.0
46 TraesCS7B01G054400 chr4D 93.023 86 3 3 1595 1678 215459545 215459629 7.550000e-24 122.0
47 TraesCS7B01G054400 chr4D 98.387 62 1 0 1 62 416867796 416867735 5.880000e-20 110.0
48 TraesCS7B01G054400 chr2B 79.412 102 19 2 5115 5216 24901540 24901441 2.770000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G054400 chr7B 57586981 57592531 5550 False 10251.000000 10251 100.000000 1 5551 1 chr7B.!!$F2 5550
1 TraesCS7B01G054400 chr7A 103150406 103155048 4642 False 1472.250000 4927 91.045250 838 5551 4 chr7A.!!$F3 4713
2 TraesCS7B01G054400 chr7D 101084286 101088765 4479 False 662.555556 1844 93.082667 831 5551 9 chr7D.!!$F3 4720
3 TraesCS7B01G054400 chr2D 645665723 645666367 644 False 948.000000 948 93.488000 62 695 1 chr2D.!!$F2 633
4 TraesCS7B01G054400 chr1A 491375893 491376532 639 False 929.000000 929 92.969000 60 695 1 chr1A.!!$F1 635
5 TraesCS7B01G054400 chr3D 56361948 56362591 643 False 928.000000 928 92.857000 60 695 1 chr3D.!!$F1 635
6 TraesCS7B01G054400 chr3D 85594261 85594901 640 False 918.000000 918 92.668000 60 695 1 chr3D.!!$F2 635
7 TraesCS7B01G054400 chr3D 597288363 597289003 640 True 918.000000 918 92.668000 60 695 1 chr3D.!!$R1 635
8 TraesCS7B01G054400 chr3B 12765071 12765709 638 True 928.000000 928 92.969000 60 695 1 chr3B.!!$R1 635
9 TraesCS7B01G054400 chr6D 15694047 15694684 637 True 922.000000 922 92.801000 60 695 1 chr6D.!!$R1 635
10 TraesCS7B01G054400 chr4A 69305469 69306108 639 False 918.000000 918 92.668000 60 695 1 chr4A.!!$F1 635
11 TraesCS7B01G054400 chr1B 453521965 453522605 640 True 918.000000 918 92.668000 60 695 1 chr1B.!!$R2 635

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
796 810 0.041839 GCATGTGCGAGCCGAATTAG 60.042 55.0 0.00 0.0 0.00 1.73 F
1305 1364 0.108520 TTCGGTGGCATCGTACTTCC 60.109 55.0 20.91 0.0 0.00 3.46 F
1619 1900 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.0 0.00 0.0 0.00 3.28 F
1747 2028 0.798009 GAATTGTTGGTGCGATGCCG 60.798 55.0 0.00 0.0 39.16 5.69 F
3096 3471 2.119801 ACTGGAGTGGCATGAACATC 57.880 50.0 0.00 0.0 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1600 1881 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.0 0.00 0.0 0.00 2.73 R
2515 2799 0.250727 GCTGTTGTAAGCCCACTGGA 60.251 55.0 0.00 0.0 37.20 3.86 R
3067 3404 0.674895 CCACTCCAGTAGCTGTTGGC 60.675 60.0 12.21 0.0 42.19 4.52 R
3693 4069 1.172812 ACCGCAGAGGCCTGTTTTTC 61.173 55.0 12.00 0.0 46.52 2.29 R
5049 5502 0.172578 GGCTTGTGTAATTTCCCGCC 59.827 55.0 0.00 0.0 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.542497 AAGTGACTACATACGAAGCAAAATAA 57.458 30.769 0.00 0.00 0.00 1.40
26 27 8.186178 AGTGACTACATACGAAGCAAAATAAG 57.814 34.615 0.00 0.00 0.00 1.73
27 28 7.817962 AGTGACTACATACGAAGCAAAATAAGT 59.182 33.333 0.00 0.00 0.00 2.24
28 29 7.898309 GTGACTACATACGAAGCAAAATAAGTG 59.102 37.037 0.00 0.00 0.00 3.16
29 30 7.815549 TGACTACATACGAAGCAAAATAAGTGA 59.184 33.333 0.00 0.00 0.00 3.41
30 31 8.542497 ACTACATACGAAGCAAAATAAGTGAA 57.458 30.769 0.00 0.00 0.00 3.18
31 32 9.162764 ACTACATACGAAGCAAAATAAGTGAAT 57.837 29.630 0.00 0.00 0.00 2.57
32 33 9.638300 CTACATACGAAGCAAAATAAGTGAATC 57.362 33.333 0.00 0.00 0.00 2.52
33 34 8.268850 ACATACGAAGCAAAATAAGTGAATCT 57.731 30.769 0.00 0.00 0.00 2.40
34 35 9.378551 ACATACGAAGCAAAATAAGTGAATCTA 57.621 29.630 0.00 0.00 0.00 1.98
35 36 9.638300 CATACGAAGCAAAATAAGTGAATCTAC 57.362 33.333 0.00 0.00 0.00 2.59
36 37 7.667043 ACGAAGCAAAATAAGTGAATCTACA 57.333 32.000 0.00 0.00 0.00 2.74
37 38 7.519002 ACGAAGCAAAATAAGTGAATCTACAC 58.481 34.615 0.00 0.00 40.60 2.90
78 79 5.053978 ACATCCTCCACAAGAAAAGTCTT 57.946 39.130 0.00 0.00 45.36 3.01
132 142 1.682451 CCCGCCTCCGATGACCTTTA 61.682 60.000 0.00 0.00 36.29 1.85
135 145 0.178068 GCCTCCGATGACCTTTAGCA 59.822 55.000 0.00 0.00 0.00 3.49
220 230 0.256464 TTGAACGTCTTGGTTGGGGT 59.744 50.000 0.00 0.00 0.00 4.95
320 330 0.333652 TCGGAGGATGTGTGGAGGTA 59.666 55.000 0.00 0.00 0.00 3.08
339 352 2.388526 ATGTCTCCGGATCTCATGGA 57.611 50.000 3.57 0.00 0.00 3.41
403 417 5.737290 CAGTTTTTGTTCATCTTCGTTCGTT 59.263 36.000 0.00 0.00 0.00 3.85
475 489 1.228063 CTGCTCTGGTGTGCTGGTT 60.228 57.895 0.00 0.00 34.18 3.67
522 536 4.084287 TCCCGACTGTCTACTACAACAAT 58.916 43.478 6.21 0.00 37.74 2.71
530 544 5.373222 TGTCTACTACAACAATGTTTGCCT 58.627 37.500 0.00 0.00 41.05 4.75
582 596 2.672996 GCCTTTGGCTCGCTCCAA 60.673 61.111 0.73 4.41 46.69 3.53
713 727 4.978083 AAACATCCGTACGTGATAGTCT 57.022 40.909 15.21 2.88 0.00 3.24
714 728 6.441093 AAAACATCCGTACGTGATAGTCTA 57.559 37.500 15.21 0.00 0.00 2.59
715 729 6.630444 AAACATCCGTACGTGATAGTCTAT 57.370 37.500 15.21 0.00 0.00 1.98
716 730 6.630444 AACATCCGTACGTGATAGTCTATT 57.370 37.500 15.21 3.24 0.00 1.73
717 731 6.630444 ACATCCGTACGTGATAGTCTATTT 57.370 37.500 15.21 0.00 0.00 1.40
718 732 7.734924 ACATCCGTACGTGATAGTCTATTTA 57.265 36.000 15.21 0.00 0.00 1.40
719 733 8.158169 ACATCCGTACGTGATAGTCTATTTAA 57.842 34.615 15.21 0.00 0.00 1.52
720 734 8.623903 ACATCCGTACGTGATAGTCTATTTAAA 58.376 33.333 15.21 0.00 0.00 1.52
721 735 9.454585 CATCCGTACGTGATAGTCTATTTAAAA 57.545 33.333 15.21 0.00 0.00 1.52
757 771 9.533831 ACACAAATATTTAGAAATGGAAGGAGT 57.466 29.630 0.00 0.00 0.00 3.85
794 808 2.793946 GCATGTGCGAGCCGAATT 59.206 55.556 0.00 0.00 0.00 2.17
795 809 2.013807 GCATGTGCGAGCCGAATTA 58.986 52.632 0.00 0.00 0.00 1.40
796 810 0.041839 GCATGTGCGAGCCGAATTAG 60.042 55.000 0.00 0.00 0.00 1.73
797 811 1.570813 CATGTGCGAGCCGAATTAGA 58.429 50.000 0.00 0.00 0.00 2.10
798 812 2.138320 CATGTGCGAGCCGAATTAGAT 58.862 47.619 0.00 0.00 0.00 1.98
799 813 2.309528 TGTGCGAGCCGAATTAGATT 57.690 45.000 0.00 0.00 0.00 2.40
800 814 1.933181 TGTGCGAGCCGAATTAGATTG 59.067 47.619 0.00 0.00 0.00 2.67
801 815 0.937304 TGCGAGCCGAATTAGATTGC 59.063 50.000 0.00 0.00 0.00 3.56
802 816 0.111089 GCGAGCCGAATTAGATTGCG 60.111 55.000 0.00 0.00 0.00 4.85
803 817 1.487482 CGAGCCGAATTAGATTGCGA 58.513 50.000 0.00 0.00 0.00 5.10
804 818 2.061773 CGAGCCGAATTAGATTGCGAT 58.938 47.619 0.00 0.00 0.00 4.58
805 819 2.159920 CGAGCCGAATTAGATTGCGATG 60.160 50.000 0.00 0.00 0.00 3.84
806 820 3.059884 GAGCCGAATTAGATTGCGATGA 58.940 45.455 0.00 0.00 0.00 2.92
807 821 3.062763 AGCCGAATTAGATTGCGATGAG 58.937 45.455 0.00 0.00 0.00 2.90
808 822 3.059884 GCCGAATTAGATTGCGATGAGA 58.940 45.455 0.00 0.00 0.00 3.27
809 823 3.494626 GCCGAATTAGATTGCGATGAGAA 59.505 43.478 0.00 0.00 0.00 2.87
810 824 4.024893 GCCGAATTAGATTGCGATGAGAAA 60.025 41.667 0.00 0.00 0.00 2.52
811 825 5.334414 GCCGAATTAGATTGCGATGAGAAAT 60.334 40.000 0.00 0.00 0.00 2.17
812 826 6.128553 GCCGAATTAGATTGCGATGAGAAATA 60.129 38.462 0.00 0.00 0.00 1.40
813 827 7.451429 CCGAATTAGATTGCGATGAGAAATAG 58.549 38.462 0.00 0.00 0.00 1.73
814 828 7.116948 CCGAATTAGATTGCGATGAGAAATAGT 59.883 37.037 0.00 0.00 0.00 2.12
815 829 9.129209 CGAATTAGATTGCGATGAGAAATAGTA 57.871 33.333 0.00 0.00 0.00 1.82
817 831 9.988815 AATTAGATTGCGATGAGAAATAGTACT 57.011 29.630 0.00 0.00 0.00 2.73
819 833 9.894783 TTAGATTGCGATGAGAAATAGTACTAC 57.105 33.333 4.31 0.00 0.00 2.73
820 834 8.172352 AGATTGCGATGAGAAATAGTACTACT 57.828 34.615 4.31 0.00 0.00 2.57
821 835 8.079203 AGATTGCGATGAGAAATAGTACTACTG 58.921 37.037 4.31 0.00 0.00 2.74
822 836 6.694877 TGCGATGAGAAATAGTACTACTGT 57.305 37.500 4.31 0.00 0.00 3.55
823 837 7.797038 TGCGATGAGAAATAGTACTACTGTA 57.203 36.000 4.31 0.00 0.00 2.74
824 838 8.392372 TGCGATGAGAAATAGTACTACTGTAT 57.608 34.615 4.31 0.00 0.00 2.29
825 839 8.290325 TGCGATGAGAAATAGTACTACTGTATG 58.710 37.037 4.31 0.00 0.00 2.39
826 840 8.291032 GCGATGAGAAATAGTACTACTGTATGT 58.709 37.037 4.31 0.00 0.00 2.29
830 844 9.170734 TGAGAAATAGTACTACTGTATGTTCGT 57.829 33.333 4.31 0.00 0.00 3.85
850 864 6.462073 TCGTTTTCTACAAATACAGAGCAC 57.538 37.500 0.00 0.00 0.00 4.40
852 866 5.390567 CGTTTTCTACAAATACAGAGCACCC 60.391 44.000 0.00 0.00 0.00 4.61
875 889 0.316841 GGTCCAATCGGCAAAAGCAA 59.683 50.000 0.00 0.00 0.00 3.91
876 890 1.418373 GTCCAATCGGCAAAAGCAAC 58.582 50.000 0.00 0.00 0.00 4.17
959 995 2.738521 CACTCTGTTCCCACGCGG 60.739 66.667 12.47 0.00 0.00 6.46
1238 1289 2.125673 CGTGAAGGTAGGTGGCCG 60.126 66.667 0.00 0.00 0.00 6.13
1288 1347 1.786579 GTGAATGTGTGGCGCTTTTTC 59.213 47.619 7.64 3.42 0.00 2.29
1304 1363 1.717194 TTTCGGTGGCATCGTACTTC 58.283 50.000 20.91 0.00 0.00 3.01
1305 1364 0.108520 TTCGGTGGCATCGTACTTCC 60.109 55.000 20.91 0.00 0.00 3.46
1319 1378 1.300620 CTTCCGTTGCGTGTGAGGA 60.301 57.895 0.00 0.00 0.00 3.71
1325 1384 2.856628 TTGCGTGTGAGGAGCGACT 61.857 57.895 0.00 0.00 0.00 4.18
1342 1401 2.046411 TGTGCGCCGTGGATGAAT 60.046 55.556 4.18 0.00 0.00 2.57
1343 1402 2.040213 CTGTGCGCCGTGGATGAATC 62.040 60.000 4.18 0.00 0.00 2.52
1345 1404 0.529773 GTGCGCCGTGGATGAATCTA 60.530 55.000 4.18 0.00 0.00 1.98
1350 1409 2.607187 GCCGTGGATGAATCTATACGG 58.393 52.381 20.01 20.01 43.94 4.02
1371 1430 1.095228 CGGGTTCGGTGGAATGGATG 61.095 60.000 0.00 0.00 34.05 3.51
1373 1432 0.751643 GGTTCGGTGGAATGGATGGG 60.752 60.000 0.00 0.00 34.05 4.00
1382 1441 3.131046 GTGGAATGGATGGGTGTGATTTC 59.869 47.826 0.00 0.00 0.00 2.17
1386 1445 4.860802 ATGGATGGGTGTGATTTCTGTA 57.139 40.909 0.00 0.00 0.00 2.74
1397 1456 6.093495 GGTGTGATTTCTGTAAATTCGGATGA 59.907 38.462 0.00 0.00 35.41 2.92
1398 1457 7.201732 GGTGTGATTTCTGTAAATTCGGATGAT 60.202 37.037 0.00 0.00 35.41 2.45
1399 1458 8.826710 GTGTGATTTCTGTAAATTCGGATGATA 58.173 33.333 0.00 0.00 35.41 2.15
1400 1459 9.559732 TGTGATTTCTGTAAATTCGGATGATAT 57.440 29.630 0.00 0.00 35.41 1.63
1407 1466 9.692749 TCTGTAAATTCGGATGATATTACTGTC 57.307 33.333 0.00 0.00 32.49 3.51
1420 1496 1.324383 TACTGTCCTGTCGCTTGTCA 58.676 50.000 0.00 0.00 0.00 3.58
1427 1503 0.578683 CTGTCGCTTGTCACTGTGTG 59.421 55.000 7.79 0.00 34.45 3.82
1449 1525 3.141398 AGATGTTTGATGCAGTGTCGTT 58.859 40.909 0.00 0.00 0.00 3.85
1450 1526 4.314961 AGATGTTTGATGCAGTGTCGTTA 58.685 39.130 0.00 0.00 0.00 3.18
1451 1527 4.389992 AGATGTTTGATGCAGTGTCGTTAG 59.610 41.667 0.00 0.00 0.00 2.34
1452 1528 2.805671 TGTTTGATGCAGTGTCGTTAGG 59.194 45.455 0.00 0.00 0.00 2.69
1461 1537 1.076024 AGTGTCGTTAGGTAGGTGGGA 59.924 52.381 0.00 0.00 0.00 4.37
1485 1561 2.882927 TGTGCTGTATCCATCGGTAC 57.117 50.000 0.00 0.00 0.00 3.34
1592 1873 2.629051 GTTCAGTTATGGAACGGAGGG 58.371 52.381 0.00 0.00 40.25 4.30
1593 1874 2.235402 GTTCAGTTATGGAACGGAGGGA 59.765 50.000 0.00 0.00 40.25 4.20
1594 1875 2.108168 TCAGTTATGGAACGGAGGGAG 58.892 52.381 0.00 0.00 40.76 4.30
1595 1876 1.831736 CAGTTATGGAACGGAGGGAGT 59.168 52.381 0.00 0.00 40.76 3.85
1596 1877 3.028850 CAGTTATGGAACGGAGGGAGTA 58.971 50.000 0.00 0.00 40.76 2.59
1597 1878 3.449737 CAGTTATGGAACGGAGGGAGTAA 59.550 47.826 0.00 0.00 40.76 2.24
1598 1879 4.101119 CAGTTATGGAACGGAGGGAGTAAT 59.899 45.833 0.00 0.00 40.76 1.89
1599 1880 4.720273 AGTTATGGAACGGAGGGAGTAATT 59.280 41.667 0.00 0.00 40.76 1.40
1600 1881 5.901276 AGTTATGGAACGGAGGGAGTAATTA 59.099 40.000 0.00 0.00 40.76 1.40
1601 1882 4.957684 ATGGAACGGAGGGAGTAATTAG 57.042 45.455 0.00 0.00 0.00 1.73
1602 1883 3.716431 TGGAACGGAGGGAGTAATTAGT 58.284 45.455 0.00 0.00 0.00 2.24
1603 1884 4.870636 TGGAACGGAGGGAGTAATTAGTA 58.129 43.478 0.00 0.00 0.00 1.82
1604 1885 4.646492 TGGAACGGAGGGAGTAATTAGTAC 59.354 45.833 0.00 0.00 0.00 2.73
1605 1886 4.892345 GGAACGGAGGGAGTAATTAGTACT 59.108 45.833 0.00 0.00 46.23 2.73
1615 1896 4.468713 AGTAATTAGTACTCCCTCCGTCC 58.531 47.826 0.00 0.00 38.84 4.79
1616 1897 2.378378 ATTAGTACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
1617 1898 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
1618 1899 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
1619 1900 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
1620 1901 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
1621 1902 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
1622 1903 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1623 1904 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1624 1905 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
1625 1906 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
1626 1907 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
1627 1908 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
1628 1909 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
1629 1910 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1630 1911 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
1631 1912 4.069304 TCCGTCCCAAAATAAGTGTCTTG 58.931 43.478 0.00 0.00 0.00 3.02
1632 1913 4.069304 CCGTCCCAAAATAAGTGTCTTGA 58.931 43.478 0.00 0.00 0.00 3.02
1633 1914 4.154195 CCGTCCCAAAATAAGTGTCTTGAG 59.846 45.833 0.00 0.00 0.00 3.02
1634 1915 4.378459 CGTCCCAAAATAAGTGTCTTGAGC 60.378 45.833 0.00 0.00 0.00 4.26
1635 1916 4.762251 GTCCCAAAATAAGTGTCTTGAGCT 59.238 41.667 0.00 0.00 0.00 4.09
1636 1917 5.241728 GTCCCAAAATAAGTGTCTTGAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
1637 1918 6.430000 GTCCCAAAATAAGTGTCTTGAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
1638 1919 6.655003 TCCCAAAATAAGTGTCTTGAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
1639 1920 6.431234 CCCAAAATAAGTGTCTTGAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
1640 1921 7.606456 CCCAAAATAAGTGTCTTGAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
1641 1922 8.443937 CCAAAATAAGTGTCTTGAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
1642 1923 8.988934 CAAAATAAGTGTCTTGAGCTTAGTACA 58.011 33.333 0.00 0.00 0.00 2.90
1643 1924 9.555727 AAAATAAGTGTCTTGAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
1644 1925 9.555727 AAATAAGTGTCTTGAGCTTAGTACAAA 57.444 29.630 0.00 0.00 0.00 2.83
1645 1926 8.764524 ATAAGTGTCTTGAGCTTAGTACAAAG 57.235 34.615 0.00 0.00 0.00 2.77
1646 1927 6.163135 AGTGTCTTGAGCTTAGTACAAAGT 57.837 37.500 0.00 0.00 0.00 2.66
1647 1928 6.583562 AGTGTCTTGAGCTTAGTACAAAGTT 58.416 36.000 0.00 0.00 0.00 2.66
1648 1929 6.480320 AGTGTCTTGAGCTTAGTACAAAGTTG 59.520 38.462 0.00 0.00 0.00 3.16
1649 1930 6.479001 GTGTCTTGAGCTTAGTACAAAGTTGA 59.521 38.462 0.00 0.00 0.00 3.18
1650 1931 6.701841 TGTCTTGAGCTTAGTACAAAGTTGAG 59.298 38.462 0.00 0.00 0.00 3.02
1651 1932 6.924060 GTCTTGAGCTTAGTACAAAGTTGAGA 59.076 38.462 0.00 0.00 0.00 3.27
1652 1933 6.924060 TCTTGAGCTTAGTACAAAGTTGAGAC 59.076 38.462 0.00 0.00 0.00 3.36
1653 1934 6.156748 TGAGCTTAGTACAAAGTTGAGACA 57.843 37.500 0.00 0.00 0.00 3.41
1654 1935 5.983720 TGAGCTTAGTACAAAGTTGAGACAC 59.016 40.000 0.00 0.00 0.00 3.67
1655 1936 6.163135 AGCTTAGTACAAAGTTGAGACACT 57.837 37.500 0.00 0.00 0.00 3.55
1656 1937 6.583562 AGCTTAGTACAAAGTTGAGACACTT 58.416 36.000 0.00 0.00 38.74 3.16
1657 1938 7.723324 AGCTTAGTACAAAGTTGAGACACTTA 58.277 34.615 0.00 0.00 35.87 2.24
1658 1939 8.368668 AGCTTAGTACAAAGTTGAGACACTTAT 58.631 33.333 0.00 0.00 35.87 1.73
1659 1940 8.989980 GCTTAGTACAAAGTTGAGACACTTATT 58.010 33.333 0.00 0.00 35.87 1.40
1663 1944 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
1664 1945 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
1665 1946 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
1666 1947 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
1667 1948 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
1668 1949 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
1669 1950 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
1670 1951 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
1671 1952 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
1680 1961 1.002069 TGGGACGGAGGGAGTACTTA 58.998 55.000 0.00 0.00 0.00 2.24
1690 1971 4.324874 GGAGGGAGTACTTACTAGACCACA 60.325 50.000 0.00 0.00 36.50 4.17
1691 1972 4.857679 AGGGAGTACTTACTAGACCACAG 58.142 47.826 0.00 0.00 36.50 3.66
1693 1974 3.380954 GGAGTACTTACTAGACCACAGCC 59.619 52.174 0.00 0.00 36.50 4.85
1706 1987 5.079643 AGACCACAGCCTTTTAACATCATT 58.920 37.500 0.00 0.00 0.00 2.57
1708 1989 4.832266 ACCACAGCCTTTTAACATCATTCA 59.168 37.500 0.00 0.00 0.00 2.57
1709 1990 5.163513 CCACAGCCTTTTAACATCATTCAC 58.836 41.667 0.00 0.00 0.00 3.18
1713 1994 4.396166 AGCCTTTTAACATCATTCACCGAG 59.604 41.667 0.00 0.00 0.00 4.63
1714 1995 4.662145 CCTTTTAACATCATTCACCGAGC 58.338 43.478 0.00 0.00 0.00 5.03
1742 2023 2.028130 AGGTTTGAATTGTTGGTGCGA 58.972 42.857 0.00 0.00 0.00 5.10
1744 2025 2.730928 GGTTTGAATTGTTGGTGCGATG 59.269 45.455 0.00 0.00 0.00 3.84
1747 2028 0.798009 GAATTGTTGGTGCGATGCCG 60.798 55.000 0.00 0.00 39.16 5.69
1751 2032 3.047280 TTGGTGCGATGCCGTGTC 61.047 61.111 0.00 0.00 38.24 3.67
1796 2077 2.480419 AGTATTCAACAACGTGAGCTGC 59.520 45.455 0.00 0.00 0.00 5.25
1813 2094 7.485913 CGTGAGCTGCTAACATATTTCAAAAAT 59.514 33.333 17.09 0.00 0.00 1.82
2059 2342 6.765989 GGGAAATTATGAGGGGTAAAATTTGC 59.234 38.462 0.00 0.00 37.23 3.68
2131 2414 4.126437 CCTGTGTTGTAGTGTGTTCATCA 58.874 43.478 0.00 0.00 0.00 3.07
2136 2420 7.192913 TGTGTTGTAGTGTGTTCATCATTTTC 58.807 34.615 0.00 0.00 0.00 2.29
2154 2438 3.359695 TTCCCCCTAAGCAACATGTAC 57.640 47.619 0.00 0.00 0.00 2.90
2158 2442 3.694566 CCCCCTAAGCAACATGTACTTTC 59.305 47.826 16.61 0.00 0.00 2.62
2168 2452 6.430000 AGCAACATGTACTTTCGGAATTTAGT 59.570 34.615 0.00 0.00 0.00 2.24
2169 2453 7.040686 AGCAACATGTACTTTCGGAATTTAGTT 60.041 33.333 0.00 0.00 0.00 2.24
2329 2613 8.410141 TGTCCATTTTTAACTTTTGTACCTGAG 58.590 33.333 0.00 0.00 0.00 3.35
2408 2692 3.569701 TCAAGGGAAAAGCACTGTTGATC 59.430 43.478 0.00 0.00 0.00 2.92
2488 2772 9.528018 CCAACATTAAGTTATTCTTTGTTGTGT 57.472 29.630 16.63 0.00 44.68 3.72
2548 2832 6.513393 GCTTACAACAGCAAATTACACTGAGT 60.513 38.462 8.74 8.74 39.83 3.41
2632 2916 7.394016 TCTTTTCACTGGATTAGACATTGCTA 58.606 34.615 0.00 0.00 0.00 3.49
2652 2936 3.278668 AATGGCATGAGAGACCTCTTG 57.721 47.619 0.00 0.00 43.52 3.02
2734 3018 7.727578 AATTTTAAATCCTTACCCGTGGAAT 57.272 32.000 0.00 0.00 35.81 3.01
2782 3070 4.112634 AGCAGGTATTTTTCAGGGTTGA 57.887 40.909 0.00 0.00 0.00 3.18
2786 3074 5.622233 GCAGGTATTTTTCAGGGTTGATGAC 60.622 44.000 0.00 0.00 32.27 3.06
2995 3283 5.728471 AGGACACAATGACACATTCTCTAG 58.272 41.667 0.00 0.00 0.00 2.43
3029 3366 8.528643 AGTAAAAGTAAAAAGTGCCTTTTCTGT 58.471 29.630 11.69 1.62 41.98 3.41
3096 3471 2.119801 ACTGGAGTGGCATGAACATC 57.880 50.000 0.00 0.00 0.00 3.06
3121 3496 7.770433 TCAATTTGAAGGTCATAGTAGGATGTG 59.230 37.037 0.00 0.00 0.00 3.21
3367 3743 3.119029 GCATACAATGGCAGGTTGATGTT 60.119 43.478 7.77 0.00 0.00 2.71
3395 3771 5.710567 GGACCATTTACAGCCCCTATTTATC 59.289 44.000 0.00 0.00 0.00 1.75
3490 3866 4.583871 ACAAAAATGGCAAAGTTGTGGAA 58.416 34.783 10.94 0.00 31.45 3.53
3698 4074 8.347004 TGCTCATTTGTCCATATGTAGAAAAA 57.653 30.769 1.24 1.26 0.00 1.94
3699 4075 8.243426 TGCTCATTTGTCCATATGTAGAAAAAC 58.757 33.333 1.24 0.00 0.00 2.43
3700 4076 8.243426 GCTCATTTGTCCATATGTAGAAAAACA 58.757 33.333 1.24 0.00 0.00 2.83
3701 4077 9.778993 CTCATTTGTCCATATGTAGAAAAACAG 57.221 33.333 1.24 0.00 31.70 3.16
3702 4078 8.739039 TCATTTGTCCATATGTAGAAAAACAGG 58.261 33.333 1.24 0.00 31.70 4.00
3793 4175 1.014564 GTCTAGAGCGGTGTTGGTGC 61.015 60.000 0.00 0.00 0.00 5.01
3798 4180 1.752198 AGCGGTGTTGGTGCTCTTA 59.248 52.632 0.00 0.00 32.44 2.10
3805 4187 2.221055 GTGTTGGTGCTCTTAGTGAACG 59.779 50.000 0.00 0.00 0.00 3.95
3817 4199 7.067129 TGCTCTTAGTGAACGTTAGATCTACAT 59.933 37.037 0.00 0.00 0.00 2.29
3823 4205 6.151312 AGTGAACGTTAGATCTACATGAGTGT 59.849 38.462 0.00 0.00 42.39 3.55
3895 4277 1.885887 TGGCAGTGCTGGAATTTACAC 59.114 47.619 16.11 0.00 0.00 2.90
3911 4349 8.250332 GGAATTTACACAAGCTTAAATGATGGA 58.750 33.333 0.00 0.00 30.08 3.41
3912 4350 9.638239 GAATTTACACAAGCTTAAATGATGGAA 57.362 29.630 0.00 0.00 30.08 3.53
3915 4353 9.995003 TTTACACAAGCTTAAATGATGGAATTT 57.005 25.926 0.00 0.00 34.24 1.82
3916 4354 9.638239 TTACACAAGCTTAAATGATGGAATTTC 57.362 29.630 0.00 0.00 32.16 2.17
3917 4355 7.099120 ACACAAGCTTAAATGATGGAATTTCC 58.901 34.615 8.59 8.59 36.96 3.13
3918 4356 6.536224 CACAAGCTTAAATGATGGAATTTCCC 59.464 38.462 12.90 0.00 35.03 3.97
3919 4357 6.441604 ACAAGCTTAAATGATGGAATTTCCCT 59.558 34.615 12.90 2.76 35.03 4.20
3920 4358 6.475596 AGCTTAAATGATGGAATTTCCCTG 57.524 37.500 12.90 0.00 35.03 4.45
3921 4359 6.197168 AGCTTAAATGATGGAATTTCCCTGA 58.803 36.000 12.90 0.00 35.03 3.86
3922 4360 6.842807 AGCTTAAATGATGGAATTTCCCTGAT 59.157 34.615 12.90 0.00 35.03 2.90
3923 4361 6.927381 GCTTAAATGATGGAATTTCCCTGATG 59.073 38.462 12.90 0.00 35.03 3.07
3924 4362 7.201938 GCTTAAATGATGGAATTTCCCTGATGA 60.202 37.037 12.90 0.00 35.03 2.92
3925 4363 6.475596 AAATGATGGAATTTCCCTGATGAC 57.524 37.500 12.90 0.00 35.03 3.06
3926 4364 4.589647 TGATGGAATTTCCCTGATGACA 57.410 40.909 12.90 0.80 35.03 3.58
3927 4365 4.933134 TGATGGAATTTCCCTGATGACAA 58.067 39.130 12.90 0.00 35.03 3.18
3928 4366 5.521696 TGATGGAATTTCCCTGATGACAAT 58.478 37.500 12.90 0.00 35.03 2.71
3929 4367 5.959594 TGATGGAATTTCCCTGATGACAATT 59.040 36.000 12.90 0.00 35.03 2.32
3930 4368 5.664294 TGGAATTTCCCTGATGACAATTG 57.336 39.130 12.90 3.24 35.03 2.32
3931 4369 4.081531 TGGAATTTCCCTGATGACAATTGC 60.082 41.667 12.90 0.00 35.03 3.56
3932 4370 4.161001 GGAATTTCCCTGATGACAATTGCT 59.839 41.667 5.05 0.00 0.00 3.91
3933 4371 4.996788 ATTTCCCTGATGACAATTGCTC 57.003 40.909 5.05 3.35 0.00 4.26
3934 4372 3.438216 TTCCCTGATGACAATTGCTCA 57.562 42.857 5.05 9.07 0.00 4.26
3935 4373 2.715046 TCCCTGATGACAATTGCTCAC 58.285 47.619 5.05 4.98 0.00 3.51
3936 4374 2.040145 TCCCTGATGACAATTGCTCACA 59.960 45.455 5.05 8.55 0.00 3.58
3937 4375 2.821378 CCCTGATGACAATTGCTCACAA 59.179 45.455 5.05 0.95 40.87 3.33
3939 4377 4.421058 CCTGATGACAATTGCTCACAATG 58.579 43.478 5.05 1.69 45.90 2.82
3940 4378 4.421058 CTGATGACAATTGCTCACAATGG 58.579 43.478 5.05 0.00 45.90 3.16
3943 4381 2.995466 ACAATTGCTCACAATGGTCG 57.005 45.000 5.05 0.00 45.61 4.79
3944 4382 2.503331 ACAATTGCTCACAATGGTCGA 58.497 42.857 5.05 0.00 45.61 4.20
3945 4383 3.084039 ACAATTGCTCACAATGGTCGAT 58.916 40.909 5.05 0.00 45.61 3.59
3946 4384 3.119743 ACAATTGCTCACAATGGTCGATG 60.120 43.478 5.05 0.00 45.61 3.84
3947 4385 1.452110 TTGCTCACAATGGTCGATGG 58.548 50.000 0.00 0.00 0.00 3.51
3948 4386 0.392863 TGCTCACAATGGTCGATGGG 60.393 55.000 0.00 0.00 0.00 4.00
3949 4387 1.097547 GCTCACAATGGTCGATGGGG 61.098 60.000 0.00 0.00 0.00 4.96
3950 4388 1.077787 TCACAATGGTCGATGGGGC 60.078 57.895 0.00 0.00 0.00 5.80
3951 4389 1.378382 CACAATGGTCGATGGGGCA 60.378 57.895 0.00 0.00 0.00 5.36
3952 4390 1.378514 ACAATGGTCGATGGGGCAC 60.379 57.895 0.00 0.00 0.00 5.01
3988 4426 2.646797 ACAAGCAAGCAGCATGGGTTT 61.647 47.619 10.41 0.00 45.81 3.27
4060 4499 9.884465 CAGAAGTTTAGACGAAATTGAAGATTT 57.116 29.630 0.00 0.00 0.00 2.17
4164 4604 6.562608 AGTGGTGGATGGGTTATATAATCTGT 59.437 38.462 5.73 0.00 0.00 3.41
4196 4636 2.987149 GTGTCACCAACTCATCACTACG 59.013 50.000 0.00 0.00 0.00 3.51
4200 4640 1.549170 ACCAACTCATCACTACGGACC 59.451 52.381 0.00 0.00 0.00 4.46
4214 4654 0.748450 CGGACCGGAAAGCCATAGTA 59.252 55.000 9.46 0.00 0.00 1.82
4232 4672 7.495901 CCATAGTACATCAGTCAGAAGTCAAT 58.504 38.462 0.00 0.00 29.71 2.57
4315 4755 3.119990 CGCCGTTCATAAGATGGTTTTGT 60.120 43.478 0.00 0.00 0.00 2.83
4358 4798 5.726397 TCAAATTGCTTGATTCAGGAATGG 58.274 37.500 0.00 0.06 39.20 3.16
4360 4800 2.219080 TGCTTGATTCAGGAATGGCA 57.781 45.000 0.00 4.87 0.00 4.92
4367 4807 5.549742 TGATTCAGGAATGGCAAAACTTT 57.450 34.783 0.00 0.00 0.00 2.66
4464 4904 4.063689 CTGCATGTTATCCTCCTTAGCAG 58.936 47.826 0.00 0.00 40.57 4.24
4477 4917 6.891908 TCCTCCTTAGCAGCTTTTGATATTTT 59.108 34.615 0.00 0.00 0.00 1.82
4539 4979 3.257393 CAGAAGGACATCCAGAAACTCG 58.743 50.000 0.00 0.00 38.89 4.18
4540 4980 2.900546 AGAAGGACATCCAGAAACTCGT 59.099 45.455 0.00 0.00 38.89 4.18
4554 4994 0.320421 ACTCGTTGCGGCATAAGTGT 60.320 50.000 2.28 2.80 0.00 3.55
4565 5005 3.252215 CGGCATAAGTGTTTTTGAGTCCA 59.748 43.478 0.00 0.00 0.00 4.02
4597 5037 4.559862 AGCACTCCTGTATATATTGCCC 57.440 45.455 0.00 0.00 0.00 5.36
4602 5042 6.072452 GCACTCCTGTATATATTGCCCTTTTC 60.072 42.308 0.00 0.00 0.00 2.29
4776 5223 1.600485 CTGGCGTTTACTTTTGACGGT 59.400 47.619 0.00 0.00 37.28 4.83
4841 5288 6.255670 ACGCAGTTGTCTACACATACATATTG 59.744 38.462 0.00 0.00 37.78 1.90
4905 5356 2.973694 ACAAATGGCCATTGCATCTC 57.026 45.000 31.28 0.00 40.13 2.75
4910 5361 3.536956 ATGGCCATTGCATCTCTTTTG 57.463 42.857 14.09 0.00 40.13 2.44
5049 5502 2.292569 AGAAAACAGAGCACATGCACAG 59.707 45.455 6.64 0.00 45.16 3.66
5057 5512 2.115052 ACATGCACAGGCGGGAAA 59.885 55.556 0.00 0.00 45.35 3.13
5058 5513 1.304381 ACATGCACAGGCGGGAAAT 60.304 52.632 0.00 0.00 45.35 2.17
5104 5560 0.036671 CTGACTCAGCATGCCAGTCA 60.037 55.000 32.66 32.66 43.39 3.41
5154 5614 9.722184 ACTTTCGATCTATTCATCATCAATCAT 57.278 29.630 0.00 0.00 0.00 2.45
5168 5628 2.480037 TCAATCATGACAGCACAACGAC 59.520 45.455 0.00 0.00 0.00 4.34
5277 5764 7.769044 TGAGCAAGTTTAGGGAGATAATTGTAC 59.231 37.037 0.00 0.00 0.00 2.90
5278 5765 7.862675 AGCAAGTTTAGGGAGATAATTGTACT 58.137 34.615 0.00 0.00 0.00 2.73
5279 5766 7.988028 AGCAAGTTTAGGGAGATAATTGTACTC 59.012 37.037 0.00 0.00 0.00 2.59
5280 5767 7.226918 GCAAGTTTAGGGAGATAATTGTACTCC 59.773 40.741 14.73 14.73 46.44 3.85
5298 5785 4.704833 CCCCGTCCAGGTGCACAG 62.705 72.222 20.43 10.43 38.74 3.66
5299 5786 4.704833 CCCGTCCAGGTGCACAGG 62.705 72.222 20.43 19.40 38.74 4.00
5300 5787 4.704833 CCGTCCAGGTGCACAGGG 62.705 72.222 20.43 18.71 34.51 4.45
5310 5797 2.512515 GCACAGGGCGCCTAAGAG 60.513 66.667 28.56 15.51 29.64 2.85
5311 5798 3.019003 GCACAGGGCGCCTAAGAGA 62.019 63.158 28.56 0.00 29.64 3.10
5312 5799 1.596934 CACAGGGCGCCTAAGAGAA 59.403 57.895 28.56 0.00 29.64 2.87
5313 5800 0.179000 CACAGGGCGCCTAAGAGAAT 59.821 55.000 28.56 0.20 29.64 2.40
5314 5801 0.466124 ACAGGGCGCCTAAGAGAATC 59.534 55.000 28.56 5.83 29.64 2.52
5315 5802 0.250081 CAGGGCGCCTAAGAGAATCC 60.250 60.000 28.56 4.97 28.85 3.01
5316 5803 0.399233 AGGGCGCCTAAGAGAATCCT 60.399 55.000 28.56 7.63 28.12 3.24
5317 5804 1.133136 AGGGCGCCTAAGAGAATCCTA 60.133 52.381 28.56 0.00 28.12 2.94
5318 5805 1.692519 GGGCGCCTAAGAGAATCCTAA 59.307 52.381 28.56 0.00 33.66 2.69
5319 5806 2.104281 GGGCGCCTAAGAGAATCCTAAA 59.896 50.000 28.56 0.00 33.66 1.85
5320 5807 3.433173 GGGCGCCTAAGAGAATCCTAAAA 60.433 47.826 28.56 0.00 33.66 1.52
5321 5808 4.390264 GGCGCCTAAGAGAATCCTAAAAT 58.610 43.478 22.15 0.00 33.66 1.82
5322 5809 4.822350 GGCGCCTAAGAGAATCCTAAAATT 59.178 41.667 22.15 0.00 33.66 1.82
5323 5810 5.299531 GGCGCCTAAGAGAATCCTAAAATTT 59.700 40.000 22.15 0.00 33.66 1.82
5324 5811 6.431278 GCGCCTAAGAGAATCCTAAAATTTC 58.569 40.000 0.00 0.00 33.66 2.17
5325 5812 6.038271 GCGCCTAAGAGAATCCTAAAATTTCA 59.962 38.462 0.00 0.00 33.66 2.69
5326 5813 7.415206 GCGCCTAAGAGAATCCTAAAATTTCAA 60.415 37.037 0.00 0.00 33.66 2.69
5327 5814 8.458843 CGCCTAAGAGAATCCTAAAATTTCAAA 58.541 33.333 0.00 0.00 33.66 2.69
5338 5825 9.893305 ATCCTAAAATTTCAAAAGTGTTAGACG 57.107 29.630 0.00 0.00 0.00 4.18
5339 5826 7.858879 TCCTAAAATTTCAAAAGTGTTAGACGC 59.141 33.333 0.00 0.00 0.00 5.19
5340 5827 7.646130 CCTAAAATTTCAAAAGTGTTAGACGCA 59.354 33.333 0.00 0.00 0.00 5.24
5341 5828 7.820044 AAAATTTCAAAAGTGTTAGACGCAA 57.180 28.000 0.00 0.00 0.00 4.85
5342 5829 8.419076 AAAATTTCAAAAGTGTTAGACGCAAT 57.581 26.923 0.00 0.00 0.00 3.56
5343 5830 8.419076 AAATTTCAAAAGTGTTAGACGCAATT 57.581 26.923 0.00 0.00 0.00 2.32
5344 5831 7.623268 ATTTCAAAAGTGTTAGACGCAATTC 57.377 32.000 0.00 0.00 0.00 2.17
5345 5832 5.743026 TCAAAAGTGTTAGACGCAATTCA 57.257 34.783 0.00 0.00 0.00 2.57
5346 5833 6.125327 TCAAAAGTGTTAGACGCAATTCAA 57.875 33.333 0.00 0.00 0.00 2.69
5347 5834 6.734137 TCAAAAGTGTTAGACGCAATTCAAT 58.266 32.000 0.00 0.00 0.00 2.57
5348 5835 7.199766 TCAAAAGTGTTAGACGCAATTCAATT 58.800 30.769 0.00 0.00 0.00 2.32
5349 5836 8.346300 TCAAAAGTGTTAGACGCAATTCAATTA 58.654 29.630 0.00 0.00 0.00 1.40
5350 5837 8.963130 CAAAAGTGTTAGACGCAATTCAATTAA 58.037 29.630 0.00 0.00 0.00 1.40
5351 5838 9.522804 AAAAGTGTTAGACGCAATTCAATTAAA 57.477 25.926 0.00 0.00 0.00 1.52
5352 5839 9.691362 AAAGTGTTAGACGCAATTCAATTAAAT 57.309 25.926 0.00 0.00 0.00 1.40
5353 5840 8.673626 AGTGTTAGACGCAATTCAATTAAATG 57.326 30.769 0.00 0.00 0.00 2.32
5354 5841 7.273381 AGTGTTAGACGCAATTCAATTAAATGC 59.727 33.333 0.00 0.00 0.00 3.56
5355 5842 7.273381 GTGTTAGACGCAATTCAATTAAATGCT 59.727 33.333 0.00 0.00 0.00 3.79
5356 5843 7.484641 TGTTAGACGCAATTCAATTAAATGCTC 59.515 33.333 0.00 0.00 0.00 4.26
5357 5844 5.343249 AGACGCAATTCAATTAAATGCTCC 58.657 37.500 0.00 0.00 0.00 4.70
5358 5845 5.126061 AGACGCAATTCAATTAAATGCTCCT 59.874 36.000 0.00 0.00 0.00 3.69
5359 5846 5.343249 ACGCAATTCAATTAAATGCTCCTC 58.657 37.500 0.00 0.00 0.00 3.71
5360 5847 4.438797 CGCAATTCAATTAAATGCTCCTCG 59.561 41.667 0.00 0.00 0.00 4.63
5361 5848 5.343249 GCAATTCAATTAAATGCTCCTCGT 58.657 37.500 0.00 0.00 0.00 4.18
5362 5849 5.807011 GCAATTCAATTAAATGCTCCTCGTT 59.193 36.000 0.00 0.00 0.00 3.85
5371 5858 5.705609 AAATGCTCCTCGTTTATTTGTGT 57.294 34.783 0.00 0.00 32.40 3.72
5395 5882 3.878778 AGATGTACCAAAGTGAGCATCC 58.121 45.455 0.00 0.00 34.41 3.51
5415 5902 4.849518 TCCGGGACAAATTGATGTATGAA 58.150 39.130 0.00 0.00 32.57 2.57
5466 5953 4.814294 CCGAAGGCCGCGCTTAGT 62.814 66.667 14.52 0.00 46.14 2.24
5467 5954 2.103538 CGAAGGCCGCGCTTAGTA 59.896 61.111 5.56 0.00 0.00 1.82
5468 5955 1.944676 CGAAGGCCGCGCTTAGTAG 60.945 63.158 5.56 0.00 0.00 2.57
5469 5956 2.202892 AAGGCCGCGCTTAGTAGC 60.203 61.111 5.56 0.00 44.21 3.58
5487 5974 2.821307 GCAAGTAGCAAGAGCACATC 57.179 50.000 0.00 0.00 45.49 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.542497 TTATTTTGCTTCGTATGTAGTCACTT 57.458 30.769 0.00 0.00 0.00 3.16
1 2 7.817962 ACTTATTTTGCTTCGTATGTAGTCACT 59.182 33.333 0.00 0.00 0.00 3.41
2 3 7.898309 CACTTATTTTGCTTCGTATGTAGTCAC 59.102 37.037 0.00 0.00 0.00 3.67
5 6 8.542497 TTCACTTATTTTGCTTCGTATGTAGT 57.458 30.769 0.00 0.00 0.00 2.73
6 7 9.638300 GATTCACTTATTTTGCTTCGTATGTAG 57.362 33.333 0.00 0.00 0.00 2.74
7 8 9.378551 AGATTCACTTATTTTGCTTCGTATGTA 57.621 29.630 0.00 0.00 0.00 2.29
8 9 8.268850 AGATTCACTTATTTTGCTTCGTATGT 57.731 30.769 0.00 0.00 0.00 2.29
9 10 9.638300 GTAGATTCACTTATTTTGCTTCGTATG 57.362 33.333 0.00 0.00 0.00 2.39
10 11 9.378551 TGTAGATTCACTTATTTTGCTTCGTAT 57.621 29.630 0.00 0.00 0.00 3.06
11 12 8.653338 GTGTAGATTCACTTATTTTGCTTCGTA 58.347 33.333 0.00 0.00 35.68 3.43
12 13 7.387948 AGTGTAGATTCACTTATTTTGCTTCGT 59.612 33.333 0.00 0.00 44.92 3.85
13 14 7.743104 AGTGTAGATTCACTTATTTTGCTTCG 58.257 34.615 0.00 0.00 44.92 3.79
44 45 9.997172 TCTTGTGGAGGATGTATATAGACATAT 57.003 33.333 12.82 5.32 40.18 1.78
45 46 9.822727 TTCTTGTGGAGGATGTATATAGACATA 57.177 33.333 12.82 0.00 40.18 2.29
46 47 8.727100 TTCTTGTGGAGGATGTATATAGACAT 57.273 34.615 12.70 12.70 42.82 3.06
47 48 8.547481 TTTCTTGTGGAGGATGTATATAGACA 57.453 34.615 2.07 2.07 0.00 3.41
48 49 9.482627 CTTTTCTTGTGGAGGATGTATATAGAC 57.517 37.037 0.00 0.00 0.00 2.59
49 50 9.213777 ACTTTTCTTGTGGAGGATGTATATAGA 57.786 33.333 0.00 0.00 0.00 1.98
50 51 9.482627 GACTTTTCTTGTGGAGGATGTATATAG 57.517 37.037 0.00 0.00 0.00 1.31
51 52 9.213777 AGACTTTTCTTGTGGAGGATGTATATA 57.786 33.333 0.00 0.00 0.00 0.86
52 53 8.095452 AGACTTTTCTTGTGGAGGATGTATAT 57.905 34.615 0.00 0.00 0.00 0.86
53 54 7.496346 AGACTTTTCTTGTGGAGGATGTATA 57.504 36.000 0.00 0.00 0.00 1.47
54 55 6.380079 AGACTTTTCTTGTGGAGGATGTAT 57.620 37.500 0.00 0.00 0.00 2.29
55 56 5.825593 AGACTTTTCTTGTGGAGGATGTA 57.174 39.130 0.00 0.00 0.00 2.29
56 57 4.713792 AGACTTTTCTTGTGGAGGATGT 57.286 40.909 0.00 0.00 0.00 3.06
57 58 5.312079 AGAAGACTTTTCTTGTGGAGGATG 58.688 41.667 0.00 0.00 42.53 3.51
58 59 5.574970 AGAAGACTTTTCTTGTGGAGGAT 57.425 39.130 0.00 0.00 42.53 3.24
78 79 2.044252 CCGACGGGAGGAGGAAGA 60.044 66.667 5.81 0.00 34.06 2.87
126 136 1.614317 GCACCTCCACATGCTAAAGGT 60.614 52.381 0.00 0.00 40.97 3.50
132 142 3.320879 CTCCGCACCTCCACATGCT 62.321 63.158 0.00 0.00 39.79 3.79
135 145 1.690219 GATCCTCCGCACCTCCACAT 61.690 60.000 0.00 0.00 0.00 3.21
320 330 2.388526 TCCATGAGATCCGGAGACAT 57.611 50.000 11.34 12.29 0.00 3.06
339 352 0.537188 AGACCAGCACCGATCGAATT 59.463 50.000 18.66 0.00 0.00 2.17
403 417 4.959210 TGGAAAGATCAAACCTGAAACCAA 59.041 37.500 0.00 0.00 34.49 3.67
475 489 1.002624 CGTGCTAAGGCCCCAAAGA 60.003 57.895 0.00 0.00 37.74 2.52
522 536 1.227823 CACCGGAGTCAGGCAAACA 60.228 57.895 9.46 0.00 0.00 2.83
570 584 2.042259 CAAGCATTGGAGCGAGCCA 61.042 57.895 0.00 0.00 43.94 4.75
582 596 1.065701 CCTAGCGACGACTACAAGCAT 59.934 52.381 0.00 0.00 0.00 3.79
635 649 1.336887 GCAGTACAGAGAACGCAAGGA 60.337 52.381 0.00 0.00 46.39 3.36
636 650 1.071605 GCAGTACAGAGAACGCAAGG 58.928 55.000 0.00 0.00 46.39 3.61
641 655 2.654749 TCATGGCAGTACAGAGAACG 57.345 50.000 0.00 0.00 0.00 3.95
695 709 9.454585 TTTTAAATAGACTATCACGTACGGATG 57.545 33.333 21.06 9.94 0.00 3.51
731 745 9.533831 ACTCCTTCCATTTCTAAATATTTGTGT 57.466 29.630 11.05 0.00 0.00 3.72
762 776 2.560119 ATGCTCCCACGCGCAAAAA 61.560 52.632 5.73 0.00 39.89 1.94
763 777 2.983030 ATGCTCCCACGCGCAAAA 60.983 55.556 5.73 0.00 39.89 2.44
764 778 3.736100 CATGCTCCCACGCGCAAA 61.736 61.111 5.73 0.00 39.89 3.68
770 784 3.190849 CTCGCACATGCTCCCACG 61.191 66.667 1.82 0.00 39.32 4.94
771 785 3.503363 GCTCGCACATGCTCCCAC 61.503 66.667 1.82 0.00 39.32 4.61
772 786 4.783621 GGCTCGCACATGCTCCCA 62.784 66.667 1.82 0.00 39.32 4.37
774 788 4.819761 TCGGCTCGCACATGCTCC 62.820 66.667 1.82 0.01 39.32 4.70
775 789 1.709147 AATTCGGCTCGCACATGCTC 61.709 55.000 1.82 0.00 39.32 4.26
776 790 0.461870 TAATTCGGCTCGCACATGCT 60.462 50.000 1.82 0.00 39.32 3.79
777 791 0.041839 CTAATTCGGCTCGCACATGC 60.042 55.000 0.00 0.00 37.78 4.06
778 792 1.570813 TCTAATTCGGCTCGCACATG 58.429 50.000 0.00 0.00 0.00 3.21
779 793 2.533266 ATCTAATTCGGCTCGCACAT 57.467 45.000 0.00 0.00 0.00 3.21
780 794 1.933181 CAATCTAATTCGGCTCGCACA 59.067 47.619 0.00 0.00 0.00 4.57
781 795 1.333258 GCAATCTAATTCGGCTCGCAC 60.333 52.381 0.00 0.00 0.00 5.34
782 796 0.937304 GCAATCTAATTCGGCTCGCA 59.063 50.000 0.00 0.00 0.00 5.10
783 797 0.111089 CGCAATCTAATTCGGCTCGC 60.111 55.000 0.00 0.00 0.00 5.03
784 798 1.487482 TCGCAATCTAATTCGGCTCG 58.513 50.000 0.00 0.00 0.00 5.03
785 799 3.059884 TCATCGCAATCTAATTCGGCTC 58.940 45.455 0.00 0.00 0.00 4.70
786 800 3.062763 CTCATCGCAATCTAATTCGGCT 58.937 45.455 0.00 0.00 0.00 5.52
787 801 3.059884 TCTCATCGCAATCTAATTCGGC 58.940 45.455 0.00 0.00 0.00 5.54
788 802 5.657470 TTTCTCATCGCAATCTAATTCGG 57.343 39.130 0.00 0.00 0.00 4.30
789 803 8.012151 ACTATTTCTCATCGCAATCTAATTCG 57.988 34.615 0.00 0.00 0.00 3.34
791 805 9.988815 AGTACTATTTCTCATCGCAATCTAATT 57.011 29.630 0.00 0.00 0.00 1.40
793 807 9.894783 GTAGTACTATTTCTCATCGCAATCTAA 57.105 33.333 5.75 0.00 0.00 2.10
794 808 9.286170 AGTAGTACTATTTCTCATCGCAATCTA 57.714 33.333 5.75 0.00 0.00 1.98
795 809 8.079203 CAGTAGTACTATTTCTCATCGCAATCT 58.921 37.037 5.75 0.00 0.00 2.40
796 810 7.863375 ACAGTAGTACTATTTCTCATCGCAATC 59.137 37.037 5.75 0.00 0.00 2.67
797 811 7.717568 ACAGTAGTACTATTTCTCATCGCAAT 58.282 34.615 5.75 0.00 0.00 3.56
798 812 7.096884 ACAGTAGTACTATTTCTCATCGCAA 57.903 36.000 5.75 0.00 0.00 4.85
799 813 6.694877 ACAGTAGTACTATTTCTCATCGCA 57.305 37.500 5.75 0.00 0.00 5.10
800 814 8.291032 ACATACAGTAGTACTATTTCTCATCGC 58.709 37.037 5.75 0.00 31.96 4.58
804 818 9.170734 ACGAACATACAGTAGTACTATTTCTCA 57.829 33.333 5.75 0.00 31.96 3.27
812 826 8.786898 TGTAGAAAACGAACATACAGTAGTACT 58.213 33.333 0.00 0.00 31.96 2.73
813 827 8.955061 TGTAGAAAACGAACATACAGTAGTAC 57.045 34.615 0.00 0.00 31.96 2.73
814 828 9.964303 TTTGTAGAAAACGAACATACAGTAGTA 57.036 29.630 0.00 0.00 34.10 1.82
815 829 8.876275 TTTGTAGAAAACGAACATACAGTAGT 57.124 30.769 0.00 0.00 0.00 2.73
818 832 9.263538 TGTATTTGTAGAAAACGAACATACAGT 57.736 29.630 0.00 0.00 34.20 3.55
819 833 9.741168 CTGTATTTGTAGAAAACGAACATACAG 57.259 33.333 5.95 5.95 38.02 2.74
820 834 9.478768 TCTGTATTTGTAGAAAACGAACATACA 57.521 29.630 0.00 0.00 34.20 2.29
821 835 9.953825 CTCTGTATTTGTAGAAAACGAACATAC 57.046 33.333 0.00 0.00 34.20 2.39
822 836 8.653338 GCTCTGTATTTGTAGAAAACGAACATA 58.347 33.333 0.00 0.00 34.20 2.29
823 837 7.172532 TGCTCTGTATTTGTAGAAAACGAACAT 59.827 33.333 0.00 0.00 34.20 2.71
824 838 6.480651 TGCTCTGTATTTGTAGAAAACGAACA 59.519 34.615 0.00 0.00 34.20 3.18
825 839 6.790825 GTGCTCTGTATTTGTAGAAAACGAAC 59.209 38.462 0.00 0.00 34.20 3.95
826 840 6.073440 GGTGCTCTGTATTTGTAGAAAACGAA 60.073 38.462 0.00 0.00 35.89 3.85
827 841 5.407387 GGTGCTCTGTATTTGTAGAAAACGA 59.593 40.000 0.00 0.00 0.00 3.85
828 842 5.390567 GGGTGCTCTGTATTTGTAGAAAACG 60.391 44.000 0.00 0.00 0.00 3.60
829 843 5.472137 TGGGTGCTCTGTATTTGTAGAAAAC 59.528 40.000 0.00 0.00 0.00 2.43
830 844 5.626142 TGGGTGCTCTGTATTTGTAGAAAA 58.374 37.500 0.00 0.00 0.00 2.29
831 845 5.235850 TGGGTGCTCTGTATTTGTAGAAA 57.764 39.130 0.00 0.00 0.00 2.52
832 846 4.323485 CCTGGGTGCTCTGTATTTGTAGAA 60.323 45.833 0.00 0.00 0.00 2.10
833 847 3.197766 CCTGGGTGCTCTGTATTTGTAGA 59.802 47.826 0.00 0.00 0.00 2.59
834 848 3.535561 CCTGGGTGCTCTGTATTTGTAG 58.464 50.000 0.00 0.00 0.00 2.74
850 864 4.506255 GCCGATTGGACCCCTGGG 62.506 72.222 5.50 5.50 37.49 4.45
852 866 0.897863 TTTTGCCGATTGGACCCCTG 60.898 55.000 1.98 0.00 37.49 4.45
875 889 2.019807 TTCTGGTTAAGGACGGAGGT 57.980 50.000 0.00 0.00 0.00 3.85
876 890 2.481449 CGATTCTGGTTAAGGACGGAGG 60.481 54.545 0.00 0.00 0.00 4.30
983 1019 3.918253 ATGATGCGCGTGGGGTGTT 62.918 57.895 6.97 0.00 0.00 3.32
993 1029 3.643978 GACGAGGCCATGATGCGC 61.644 66.667 5.01 0.00 0.00 6.09
1238 1289 3.117046 CGAAAATTACGAGGAGAGAGCC 58.883 50.000 0.00 0.00 0.00 4.70
1288 1347 1.876714 CGGAAGTACGATGCCACCG 60.877 63.158 0.00 0.00 35.47 4.94
1304 1363 3.414700 GCTCCTCACACGCAACGG 61.415 66.667 0.00 0.00 0.00 4.44
1305 1364 3.767230 CGCTCCTCACACGCAACG 61.767 66.667 0.00 0.00 0.00 4.10
1325 1384 2.046411 ATTCATCCACGGCGCACA 60.046 55.556 10.83 0.00 0.00 4.57
1337 1396 1.640917 ACCCGCCCGTATAGATTCAT 58.359 50.000 0.00 0.00 0.00 2.57
1342 1401 2.195567 CCGAACCCGCCCGTATAGA 61.196 63.158 0.00 0.00 0.00 1.98
1343 1402 2.337532 CCGAACCCGCCCGTATAG 59.662 66.667 0.00 0.00 0.00 1.31
1345 1404 4.151582 CACCGAACCCGCCCGTAT 62.152 66.667 0.00 0.00 0.00 3.06
1350 1409 3.131478 CATTCCACCGAACCCGCC 61.131 66.667 0.00 0.00 0.00 6.13
1371 1430 4.698304 TCCGAATTTACAGAAATCACACCC 59.302 41.667 0.00 0.00 34.01 4.61
1373 1432 7.072177 TCATCCGAATTTACAGAAATCACAC 57.928 36.000 0.00 0.00 34.01 3.82
1382 1441 8.926710 GGACAGTAATATCATCCGAATTTACAG 58.073 37.037 0.00 0.00 30.55 2.74
1386 1445 7.509546 ACAGGACAGTAATATCATCCGAATTT 58.490 34.615 0.00 0.00 34.46 1.82
1397 1456 4.159693 TGACAAGCGACAGGACAGTAATAT 59.840 41.667 0.00 0.00 0.00 1.28
1398 1457 3.508402 TGACAAGCGACAGGACAGTAATA 59.492 43.478 0.00 0.00 0.00 0.98
1399 1458 2.299013 TGACAAGCGACAGGACAGTAAT 59.701 45.455 0.00 0.00 0.00 1.89
1400 1459 1.684450 TGACAAGCGACAGGACAGTAA 59.316 47.619 0.00 0.00 0.00 2.24
1403 1462 0.032678 AGTGACAAGCGACAGGACAG 59.967 55.000 0.00 0.00 0.00 3.51
1404 1463 0.249447 CAGTGACAAGCGACAGGACA 60.249 55.000 0.00 0.00 0.00 4.02
1405 1464 0.249489 ACAGTGACAAGCGACAGGAC 60.249 55.000 0.00 0.00 0.00 3.85
1406 1465 0.249447 CACAGTGACAAGCGACAGGA 60.249 55.000 0.00 0.00 0.00 3.86
1407 1466 0.530650 ACACAGTGACAAGCGACAGG 60.531 55.000 7.81 0.00 0.00 4.00
1420 1496 3.479489 TGCATCAAACATCTCACACAGT 58.521 40.909 0.00 0.00 0.00 3.55
1427 1503 2.738846 ACGACACTGCATCAAACATCTC 59.261 45.455 0.00 0.00 0.00 2.75
1449 1525 1.062428 CACATCCCTCCCACCTACCTA 60.062 57.143 0.00 0.00 0.00 3.08
1450 1526 0.326618 CACATCCCTCCCACCTACCT 60.327 60.000 0.00 0.00 0.00 3.08
1451 1527 1.984288 GCACATCCCTCCCACCTACC 61.984 65.000 0.00 0.00 0.00 3.18
1452 1528 0.983378 AGCACATCCCTCCCACCTAC 60.983 60.000 0.00 0.00 0.00 3.18
1485 1561 8.110002 GCAACGGAGCATTTCAAATAAAAATAG 58.890 33.333 0.00 0.00 0.00 1.73
1549 1830 7.068692 ACTAAAACCACGACAAGTATTATGC 57.931 36.000 0.00 0.00 0.00 3.14
1593 1874 4.468713 GGACGGAGGGAGTACTAATTACT 58.531 47.826 0.00 0.00 44.35 2.24
1594 1875 3.571828 GGGACGGAGGGAGTACTAATTAC 59.428 52.174 0.00 0.00 0.00 1.89
1595 1876 3.205056 TGGGACGGAGGGAGTACTAATTA 59.795 47.826 0.00 0.00 0.00 1.40
1596 1877 2.023695 TGGGACGGAGGGAGTACTAATT 60.024 50.000 0.00 0.00 0.00 1.40
1597 1878 1.572415 TGGGACGGAGGGAGTACTAAT 59.428 52.381 0.00 0.00 0.00 1.73
1598 1879 1.002069 TGGGACGGAGGGAGTACTAA 58.998 55.000 0.00 0.00 0.00 2.24
1599 1880 1.002069 TTGGGACGGAGGGAGTACTA 58.998 55.000 0.00 0.00 0.00 1.82
1600 1881 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
1601 1882 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
1602 1883 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1603 1884 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
1604 1885 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
1605 1886 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
1606 1887 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
1607 1888 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
1608 1889 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
1609 1890 4.069304 CAAGACACTTATTTTGGGACGGA 58.931 43.478 0.00 0.00 0.00 4.69
1610 1891 4.069304 TCAAGACACTTATTTTGGGACGG 58.931 43.478 0.00 0.00 0.00 4.79
1611 1892 4.378459 GCTCAAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
1612 1893 4.762251 AGCTCAAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
1613 1894 4.985538 AGCTCAAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
1614 1895 5.712152 AAGCTCAAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
1615 1896 7.440523 ACTAAGCTCAAGACACTTATTTTGG 57.559 36.000 3.19 0.00 0.00 3.28
1616 1897 8.988934 TGTACTAAGCTCAAGACACTTATTTTG 58.011 33.333 3.19 0.00 0.00 2.44
1617 1898 9.555727 TTGTACTAAGCTCAAGACACTTATTTT 57.444 29.630 3.19 0.00 0.00 1.82
1618 1899 9.555727 TTTGTACTAAGCTCAAGACACTTATTT 57.444 29.630 3.19 0.00 0.00 1.40
1619 1900 9.209175 CTTTGTACTAAGCTCAAGACACTTATT 57.791 33.333 4.12 0.00 0.00 1.40
1620 1901 8.368668 ACTTTGTACTAAGCTCAAGACACTTAT 58.631 33.333 15.69 0.00 0.00 1.73
1621 1902 7.723324 ACTTTGTACTAAGCTCAAGACACTTA 58.277 34.615 15.69 0.00 0.00 2.24
1622 1903 6.583562 ACTTTGTACTAAGCTCAAGACACTT 58.416 36.000 15.69 0.00 0.00 3.16
1623 1904 6.163135 ACTTTGTACTAAGCTCAAGACACT 57.837 37.500 15.69 0.00 0.00 3.55
1624 1905 6.479001 TCAACTTTGTACTAAGCTCAAGACAC 59.521 38.462 15.69 2.09 0.00 3.67
1625 1906 6.578944 TCAACTTTGTACTAAGCTCAAGACA 58.421 36.000 15.69 0.00 0.00 3.41
1626 1907 6.924060 TCTCAACTTTGTACTAAGCTCAAGAC 59.076 38.462 15.69 0.00 0.00 3.01
1627 1908 6.924060 GTCTCAACTTTGTACTAAGCTCAAGA 59.076 38.462 15.69 10.92 0.00 3.02
1628 1909 6.701841 TGTCTCAACTTTGTACTAAGCTCAAG 59.298 38.462 15.69 9.14 0.00 3.02
1629 1910 6.479001 GTGTCTCAACTTTGTACTAAGCTCAA 59.521 38.462 15.69 0.73 0.00 3.02
1630 1911 5.983720 GTGTCTCAACTTTGTACTAAGCTCA 59.016 40.000 15.69 5.15 0.00 4.26
1631 1912 6.217294 AGTGTCTCAACTTTGTACTAAGCTC 58.783 40.000 15.69 1.80 0.00 4.09
1632 1913 6.163135 AGTGTCTCAACTTTGTACTAAGCT 57.837 37.500 15.69 2.23 0.00 3.74
1633 1914 6.846325 AAGTGTCTCAACTTTGTACTAAGC 57.154 37.500 15.69 1.05 37.05 3.09
1637 1918 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
1638 1919 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
1639 1920 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
1640 1921 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
1641 1922 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
1642 1923 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
1643 1924 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
1644 1925 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
1645 1926 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
1646 1927 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
1647 1928 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
1648 1929 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
1649 1930 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1650 1931 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
1651 1932 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
1652 1933 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
1653 1934 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
1654 1935 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
1655 1936 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1656 1937 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1657 1938 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
1658 1939 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
1659 1940 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
1660 1941 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
1661 1942 1.002069 TAAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
1662 1943 1.064091 AGTAAGTACTCCCTCCGTCCC 60.064 57.143 0.00 0.00 0.00 4.46
1663 1944 2.433662 AGTAAGTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
1664 1945 4.126437 GTCTAGTAAGTACTCCCTCCGTC 58.874 52.174 0.00 0.00 37.73 4.79
1665 1946 3.118075 GGTCTAGTAAGTACTCCCTCCGT 60.118 52.174 0.00 0.00 37.73 4.69
1666 1947 3.118112 TGGTCTAGTAAGTACTCCCTCCG 60.118 52.174 0.00 0.00 37.73 4.63
1667 1948 4.206375 GTGGTCTAGTAAGTACTCCCTCC 58.794 52.174 0.00 0.00 37.73 4.30
1668 1949 4.853007 TGTGGTCTAGTAAGTACTCCCTC 58.147 47.826 0.00 0.00 37.73 4.30
1669 1950 4.857679 CTGTGGTCTAGTAAGTACTCCCT 58.142 47.826 0.00 0.00 37.73 4.20
1670 1951 3.380954 GCTGTGGTCTAGTAAGTACTCCC 59.619 52.174 0.00 0.00 37.73 4.30
1671 1952 3.380954 GGCTGTGGTCTAGTAAGTACTCC 59.619 52.174 0.00 0.00 37.73 3.85
1680 1961 4.699925 TGTTAAAAGGCTGTGGTCTAGT 57.300 40.909 0.00 0.00 0.00 2.57
1690 1971 4.331968 TCGGTGAATGATGTTAAAAGGCT 58.668 39.130 0.00 0.00 0.00 4.58
1691 1972 4.662145 CTCGGTGAATGATGTTAAAAGGC 58.338 43.478 0.00 0.00 0.00 4.35
1693 1974 4.334443 CGCTCGGTGAATGATGTTAAAAG 58.666 43.478 0.00 0.00 0.00 2.27
1709 1990 1.137479 TCAAACCTATTACCCGCTCGG 59.863 52.381 0.48 0.48 37.81 4.63
1713 1994 4.976224 ACAATTCAAACCTATTACCCGC 57.024 40.909 0.00 0.00 0.00 6.13
1714 1995 5.184287 ACCAACAATTCAAACCTATTACCCG 59.816 40.000 0.00 0.00 0.00 5.28
1722 2003 2.028130 TCGCACCAACAATTCAAACCT 58.972 42.857 0.00 0.00 0.00 3.50
1742 2023 1.133598 CATGAGCATTTGACACGGCAT 59.866 47.619 0.00 0.00 0.00 4.40
1744 2025 0.179156 CCATGAGCATTTGACACGGC 60.179 55.000 0.00 0.00 0.00 5.68
1768 2049 4.281435 TCACGTTGTTGAATACTAGGACCA 59.719 41.667 0.00 0.00 0.00 4.02
1902 2183 8.185506 TGTACCGACACATAGATGGTAAATAT 57.814 34.615 0.00 0.00 36.96 1.28
2131 2414 3.790126 ACATGTTGCTTAGGGGGAAAAT 58.210 40.909 0.00 0.00 0.00 1.82
2136 2420 3.366052 AAGTACATGTTGCTTAGGGGG 57.634 47.619 2.30 0.00 0.00 5.40
2320 2604 5.071788 ACAGAGAAATGTTTCCTCAGGTACA 59.928 40.000 4.24 4.24 37.92 2.90
2323 2607 4.713792 ACAGAGAAATGTTTCCTCAGGT 57.286 40.909 0.00 0.00 37.92 4.00
2408 2692 5.046910 ACCATTGAGAAGCAACATTAACG 57.953 39.130 0.00 0.00 39.78 3.18
2510 2794 3.153919 GTTGTAAGCCCACTGGATTTCA 58.846 45.455 0.00 0.00 36.71 2.69
2515 2799 0.250727 GCTGTTGTAAGCCCACTGGA 60.251 55.000 0.00 0.00 37.20 3.86
2632 2916 2.575279 ACAAGAGGTCTCTCATGCCATT 59.425 45.455 0.51 0.00 41.06 3.16
2769 3057 5.710099 GGATAGTGTCATCAACCCTGAAAAA 59.290 40.000 0.00 0.00 34.49 1.94
2782 3070 1.410850 CCGGCCTGGGATAGTGTCAT 61.411 60.000 0.00 0.00 0.00 3.06
2786 3074 2.808206 GGACCGGCCTGGGATAGTG 61.808 68.421 16.44 0.00 44.64 2.74
2834 3122 7.448161 TGTTAGTCATGTGGATTGAAACAGAAT 59.552 33.333 0.00 0.00 0.00 2.40
2913 3201 0.878961 GTTGTTGAGGCCGAAGTCGT 60.879 55.000 0.00 0.00 37.74 4.34
2995 3283 8.377681 GGCACTTTTTACTTTTACTCAAACAAC 58.622 33.333 0.00 0.00 0.00 3.32
3067 3404 0.674895 CCACTCCAGTAGCTGTTGGC 60.675 60.000 12.21 0.00 42.19 4.52
3096 3471 7.554118 ACACATCCTACTATGACCTTCAAATTG 59.446 37.037 0.00 0.00 0.00 2.32
3367 3743 2.856231 AGGGGCTGTAAATGGTCCATTA 59.144 45.455 17.63 1.48 32.43 1.90
3461 3837 5.606348 ACTTTGCCATTTTTGTCCACTAA 57.394 34.783 0.00 0.00 0.00 2.24
3490 3866 4.142038 GTGAAGTTGTTGGTGGGTATCTT 58.858 43.478 0.00 0.00 0.00 2.40
3604 3980 8.745590 GGGAATCTTAGAACTAGAGATCCATAC 58.254 40.741 0.00 0.00 30.19 2.39
3606 3982 6.728632 GGGGAATCTTAGAACTAGAGATCCAT 59.271 42.308 0.00 0.00 30.19 3.41
3693 4069 1.172812 ACCGCAGAGGCCTGTTTTTC 61.173 55.000 12.00 0.00 46.52 2.29
3698 4074 2.925170 AAGACCGCAGAGGCCTGT 60.925 61.111 12.00 1.36 46.52 4.00
3699 4075 2.435586 CAAGACCGCAGAGGCCTG 60.436 66.667 12.00 0.00 46.52 4.85
3700 4076 2.925170 ACAAGACCGCAGAGGCCT 60.925 61.111 3.86 3.86 46.52 5.19
3701 4077 2.743928 CACAAGACCGCAGAGGCC 60.744 66.667 0.00 0.00 46.52 5.19
3702 4078 2.743928 CCACAAGACCGCAGAGGC 60.744 66.667 0.00 0.00 46.52 4.70
3793 4175 8.613482 TCATGTAGATCTAACGTTCACTAAGAG 58.387 37.037 2.82 0.00 0.00 2.85
3798 4180 6.151312 ACACTCATGTAGATCTAACGTTCACT 59.849 38.462 2.82 2.94 37.26 3.41
3805 4187 9.029243 CATCTGAAACACTCATGTAGATCTAAC 57.971 37.037 3.40 0.00 38.45 2.34
3817 4199 2.636647 TGTGCCATCTGAAACACTCA 57.363 45.000 8.77 0.00 34.14 3.41
3823 4205 1.272037 TGGAGCATGTGCCATCTGAAA 60.272 47.619 0.57 0.00 43.38 2.69
3845 4227 9.856488 CTGTACGCTATGACCTATTATAACAAT 57.144 33.333 0.00 0.00 0.00 2.71
3895 4277 6.759827 CAGGGAAATTCCATCATTTAAGCTTG 59.240 38.462 14.68 0.00 38.64 4.01
3911 4349 4.773674 TGAGCAATTGTCATCAGGGAAATT 59.226 37.500 7.40 0.00 0.00 1.82
3912 4350 4.159135 GTGAGCAATTGTCATCAGGGAAAT 59.841 41.667 7.40 0.00 0.00 2.17
3913 4351 3.507233 GTGAGCAATTGTCATCAGGGAAA 59.493 43.478 7.40 0.00 0.00 3.13
3914 4352 3.084039 GTGAGCAATTGTCATCAGGGAA 58.916 45.455 7.40 0.00 0.00 3.97
3915 4353 2.040145 TGTGAGCAATTGTCATCAGGGA 59.960 45.455 7.40 0.00 0.00 4.20
3916 4354 2.439409 TGTGAGCAATTGTCATCAGGG 58.561 47.619 7.40 0.00 0.00 4.45
3917 4355 4.421058 CATTGTGAGCAATTGTCATCAGG 58.579 43.478 7.40 0.07 42.91 3.86
3918 4356 4.082408 ACCATTGTGAGCAATTGTCATCAG 60.082 41.667 7.40 0.92 42.91 2.90
3919 4357 3.827876 ACCATTGTGAGCAATTGTCATCA 59.172 39.130 7.40 6.67 42.91 3.07
3920 4358 4.445452 ACCATTGTGAGCAATTGTCATC 57.555 40.909 7.40 4.11 42.91 2.92
3923 4361 2.483877 TCGACCATTGTGAGCAATTGTC 59.516 45.455 7.40 11.92 46.09 3.18
3924 4362 2.503331 TCGACCATTGTGAGCAATTGT 58.497 42.857 7.40 0.00 42.91 2.71
3925 4363 3.431856 CATCGACCATTGTGAGCAATTG 58.568 45.455 0.00 0.00 42.91 2.32
3926 4364 2.424601 CCATCGACCATTGTGAGCAATT 59.575 45.455 0.00 0.00 42.91 2.32
3927 4365 2.019249 CCATCGACCATTGTGAGCAAT 58.981 47.619 0.00 0.00 45.42 3.56
3928 4366 1.452110 CCATCGACCATTGTGAGCAA 58.548 50.000 0.00 0.00 39.16 3.91
3929 4367 0.392863 CCCATCGACCATTGTGAGCA 60.393 55.000 0.00 0.00 0.00 4.26
3930 4368 1.097547 CCCCATCGACCATTGTGAGC 61.098 60.000 0.00 0.00 0.00 4.26
3931 4369 1.097547 GCCCCATCGACCATTGTGAG 61.098 60.000 0.00 0.00 0.00 3.51
3932 4370 1.077787 GCCCCATCGACCATTGTGA 60.078 57.895 0.00 0.00 0.00 3.58
3933 4371 1.378382 TGCCCCATCGACCATTGTG 60.378 57.895 0.00 0.00 0.00 3.33
3934 4372 1.378514 GTGCCCCATCGACCATTGT 60.379 57.895 0.00 0.00 0.00 2.71
3935 4373 2.120909 GGTGCCCCATCGACCATTG 61.121 63.158 0.00 0.00 0.00 2.82
3936 4374 2.275418 GGTGCCCCATCGACCATT 59.725 61.111 0.00 0.00 0.00 3.16
3937 4375 3.809013 GGGTGCCCCATCGACCAT 61.809 66.667 5.45 0.00 44.65 3.55
4060 4499 1.899814 ACCGCATTAGTTCAGGACTCA 59.100 47.619 0.00 0.00 39.86 3.41
4107 4546 1.164411 TTATGCCAAAGTGAGCACCG 58.836 50.000 0.00 0.00 42.84 4.94
4164 4604 4.699637 AGTTGGTGACACGAAATCAACTA 58.300 39.130 19.37 0.00 41.70 2.24
4196 4636 1.483415 TGTACTATGGCTTTCCGGTCC 59.517 52.381 0.00 0.00 34.14 4.46
4200 4640 4.051922 GACTGATGTACTATGGCTTTCCG 58.948 47.826 0.00 0.00 34.14 4.30
4214 4654 6.543465 TGACAAAATTGACTTCTGACTGATGT 59.457 34.615 0.00 1.18 36.02 3.06
4250 4690 6.591448 GGGCCAAAAGAAAAATAGTGAATGAG 59.409 38.462 4.39 0.00 0.00 2.90
4350 4790 6.458210 AGATACAAAAGTTTTGCCATTCCTG 58.542 36.000 24.86 2.77 0.00 3.86
4358 4798 6.587608 CCCTCAATGAGATACAAAAGTTTTGC 59.412 38.462 24.86 11.35 0.00 3.68
4360 4800 6.295292 GCCCCTCAATGAGATACAAAAGTTTT 60.295 38.462 12.53 0.00 0.00 2.43
4367 4807 2.575735 TGTGCCCCTCAATGAGATACAA 59.424 45.455 12.53 0.00 0.00 2.41
4464 4904 5.574443 GTGAGCAGTGGAAAATATCAAAAGC 59.426 40.000 0.00 0.00 0.00 3.51
4539 4979 3.376540 TCAAAAACACTTATGCCGCAAC 58.623 40.909 0.00 0.00 0.00 4.17
4540 4980 3.067461 ACTCAAAAACACTTATGCCGCAA 59.933 39.130 0.00 0.00 0.00 4.85
4554 4994 6.377327 CTTAACTGAAGCTGGACTCAAAAA 57.623 37.500 0.00 0.00 0.00 1.94
4597 5037 6.709397 AGTAAAACTCTAGTTTCCGGGAAAAG 59.291 38.462 23.05 18.19 46.47 2.27
4602 5042 5.178809 CACAAGTAAAACTCTAGTTTCCGGG 59.821 44.000 8.47 0.00 46.47 5.73
4738 5184 2.413239 CCAGTATTGTTGCTCGTGCTTG 60.413 50.000 11.19 0.00 40.48 4.01
4776 5223 0.684535 TCCACGTCATTGCCAAGAGA 59.315 50.000 0.00 0.00 0.00 3.10
4834 5281 3.818210 TCTGGAACGCACAAACAATATGT 59.182 39.130 0.00 0.00 0.00 2.29
4841 5288 4.359706 AGATTTTTCTGGAACGCACAAAC 58.640 39.130 0.00 0.00 0.00 2.93
4880 5331 2.231964 TGCAATGGCCATTTGTTCTCTC 59.768 45.455 28.68 10.21 40.13 3.20
4905 5356 4.332819 ACTGAGTCTTCGACCAAACAAAAG 59.667 41.667 0.00 0.00 32.18 2.27
4910 5361 3.621715 ACAAACTGAGTCTTCGACCAAAC 59.378 43.478 0.00 0.00 32.18 2.93
5049 5502 0.172578 GGCTTGTGTAATTTCCCGCC 59.827 55.000 0.00 0.00 0.00 6.13
5120 5577 5.352284 TGAATAGATCGAAAGTTCTCTGGC 58.648 41.667 0.00 0.00 40.44 4.85
5123 5580 8.637099 TGATGATGAATAGATCGAAAGTTCTCT 58.363 33.333 0.00 0.00 40.44 3.10
5154 5614 0.747852 TGGTAGTCGTTGTGCTGTCA 59.252 50.000 0.00 0.00 0.00 3.58
5196 5683 4.202430 TGAGGCTAGTGTGATCTACGGATA 60.202 45.833 0.00 0.00 31.46 2.59
5281 5768 4.704833 CTGTGCACCTGGACGGGG 62.705 72.222 15.69 0.00 38.83 5.73
5283 5770 4.704833 CCCTGTGCACCTGGACGG 62.705 72.222 22.68 10.37 41.67 4.79
5290 5777 4.715523 TTAGGCGCCCTGTGCACC 62.716 66.667 26.15 0.00 42.83 5.01
5291 5778 3.127533 CTTAGGCGCCCTGTGCAC 61.128 66.667 26.15 10.75 41.25 4.57
5292 5779 3.315142 CTCTTAGGCGCCCTGTGCA 62.315 63.158 26.15 0.90 41.25 4.57
5293 5780 2.512515 CTCTTAGGCGCCCTGTGC 60.513 66.667 26.15 0.00 38.45 4.57
5294 5781 0.179000 ATTCTCTTAGGCGCCCTGTG 59.821 55.000 26.15 14.23 34.61 3.66
5295 5782 0.466124 GATTCTCTTAGGCGCCCTGT 59.534 55.000 26.15 7.52 34.61 4.00
5296 5783 0.250081 GGATTCTCTTAGGCGCCCTG 60.250 60.000 26.15 14.00 34.61 4.45
5297 5784 0.399233 AGGATTCTCTTAGGCGCCCT 60.399 55.000 26.15 13.52 37.71 5.19
5298 5785 1.339097 TAGGATTCTCTTAGGCGCCC 58.661 55.000 26.15 5.07 0.00 6.13
5299 5786 3.470645 TTTAGGATTCTCTTAGGCGCC 57.529 47.619 21.89 21.89 0.00 6.53
5300 5787 6.038271 TGAAATTTTAGGATTCTCTTAGGCGC 59.962 38.462 0.00 0.00 0.00 6.53
5301 5788 7.553881 TGAAATTTTAGGATTCTCTTAGGCG 57.446 36.000 0.00 0.00 0.00 5.52
5312 5799 9.893305 CGTCTAACACTTTTGAAATTTTAGGAT 57.107 29.630 0.00 0.00 0.00 3.24
5313 5800 7.858879 GCGTCTAACACTTTTGAAATTTTAGGA 59.141 33.333 0.00 0.00 0.00 2.94
5314 5801 7.646130 TGCGTCTAACACTTTTGAAATTTTAGG 59.354 33.333 0.00 0.00 0.00 2.69
5315 5802 8.555166 TGCGTCTAACACTTTTGAAATTTTAG 57.445 30.769 0.00 0.00 0.00 1.85
5316 5803 8.912787 TTGCGTCTAACACTTTTGAAATTTTA 57.087 26.923 0.00 0.00 0.00 1.52
5317 5804 7.820044 TTGCGTCTAACACTTTTGAAATTTT 57.180 28.000 0.00 0.00 0.00 1.82
5318 5805 8.419076 AATTGCGTCTAACACTTTTGAAATTT 57.581 26.923 0.00 0.00 0.00 1.82
5319 5806 7.704472 TGAATTGCGTCTAACACTTTTGAAATT 59.296 29.630 0.00 0.00 0.00 1.82
5320 5807 7.199766 TGAATTGCGTCTAACACTTTTGAAAT 58.800 30.769 0.00 0.00 0.00 2.17
5321 5808 6.556212 TGAATTGCGTCTAACACTTTTGAAA 58.444 32.000 0.00 0.00 0.00 2.69
5322 5809 6.125327 TGAATTGCGTCTAACACTTTTGAA 57.875 33.333 0.00 0.00 0.00 2.69
5323 5810 5.743026 TGAATTGCGTCTAACACTTTTGA 57.257 34.783 0.00 0.00 0.00 2.69
5324 5811 6.991485 ATTGAATTGCGTCTAACACTTTTG 57.009 33.333 0.00 0.00 0.00 2.44
5325 5812 9.522804 TTTAATTGAATTGCGTCTAACACTTTT 57.477 25.926 0.00 0.00 0.00 2.27
5326 5813 9.691362 ATTTAATTGAATTGCGTCTAACACTTT 57.309 25.926 0.00 0.00 0.00 2.66
5327 5814 9.128107 CATTTAATTGAATTGCGTCTAACACTT 57.872 29.630 0.00 0.00 0.00 3.16
5328 5815 7.273381 GCATTTAATTGAATTGCGTCTAACACT 59.727 33.333 0.00 0.00 35.38 3.55
5329 5816 7.273381 AGCATTTAATTGAATTGCGTCTAACAC 59.727 33.333 0.00 0.00 45.17 3.32
5330 5817 7.312154 AGCATTTAATTGAATTGCGTCTAACA 58.688 30.769 0.00 0.00 45.17 2.41
5331 5818 7.044052 GGAGCATTTAATTGAATTGCGTCTAAC 60.044 37.037 0.00 0.00 45.17 2.34
5332 5819 6.972328 GGAGCATTTAATTGAATTGCGTCTAA 59.028 34.615 0.00 0.00 45.17 2.10
5333 5820 6.318648 AGGAGCATTTAATTGAATTGCGTCTA 59.681 34.615 0.00 0.00 45.17 2.59
5334 5821 5.126061 AGGAGCATTTAATTGAATTGCGTCT 59.874 36.000 0.00 0.00 45.17 4.18
5335 5822 5.343249 AGGAGCATTTAATTGAATTGCGTC 58.657 37.500 0.00 0.00 45.17 5.19
5336 5823 5.329035 AGGAGCATTTAATTGAATTGCGT 57.671 34.783 0.00 0.00 45.17 5.24
5337 5824 4.438797 CGAGGAGCATTTAATTGAATTGCG 59.561 41.667 0.00 0.00 45.17 4.85
5338 5825 5.343249 ACGAGGAGCATTTAATTGAATTGC 58.657 37.500 0.00 0.00 42.32 3.56
5339 5826 7.816945 AAACGAGGAGCATTTAATTGAATTG 57.183 32.000 0.00 0.00 0.00 2.32
5342 5829 9.352784 CAAATAAACGAGGAGCATTTAATTGAA 57.647 29.630 1.55 0.00 33.46 2.69
5343 5830 8.519526 ACAAATAAACGAGGAGCATTTAATTGA 58.480 29.630 9.55 0.00 34.50 2.57
5344 5831 8.586273 CACAAATAAACGAGGAGCATTTAATTG 58.414 33.333 0.00 0.00 35.91 2.32
5345 5832 8.303876 ACACAAATAAACGAGGAGCATTTAATT 58.696 29.630 0.00 0.00 0.00 1.40
5346 5833 7.754924 CACACAAATAAACGAGGAGCATTTAAT 59.245 33.333 0.00 0.00 0.00 1.40
5347 5834 7.041030 TCACACAAATAAACGAGGAGCATTTAA 60.041 33.333 0.00 0.00 0.00 1.52
5348 5835 6.428465 TCACACAAATAAACGAGGAGCATTTA 59.572 34.615 0.00 0.00 0.00 1.40
5349 5836 5.240623 TCACACAAATAAACGAGGAGCATTT 59.759 36.000 0.00 0.00 0.00 2.32
5350 5837 4.759693 TCACACAAATAAACGAGGAGCATT 59.240 37.500 0.00 0.00 0.00 3.56
5351 5838 4.323417 TCACACAAATAAACGAGGAGCAT 58.677 39.130 0.00 0.00 0.00 3.79
5352 5839 3.734463 TCACACAAATAAACGAGGAGCA 58.266 40.909 0.00 0.00 0.00 4.26
5353 5840 4.451096 TCTTCACACAAATAAACGAGGAGC 59.549 41.667 0.00 0.00 0.00 4.70
5354 5841 6.147821 ACATCTTCACACAAATAAACGAGGAG 59.852 38.462 0.00 0.00 0.00 3.69
5355 5842 5.995282 ACATCTTCACACAAATAAACGAGGA 59.005 36.000 0.00 0.00 0.00 3.71
5356 5843 6.241207 ACATCTTCACACAAATAAACGAGG 57.759 37.500 0.00 0.00 0.00 4.63
5357 5844 7.095397 TGGTACATCTTCACACAAATAAACGAG 60.095 37.037 0.00 0.00 0.00 4.18
5358 5845 6.706716 TGGTACATCTTCACACAAATAAACGA 59.293 34.615 0.00 0.00 0.00 3.85
5359 5846 6.893759 TGGTACATCTTCACACAAATAAACG 58.106 36.000 0.00 0.00 0.00 3.60
5360 5847 9.180678 CTTTGGTACATCTTCACACAAATAAAC 57.819 33.333 0.00 0.00 39.30 2.01
5361 5848 8.908903 ACTTTGGTACATCTTCACACAAATAAA 58.091 29.630 0.00 0.00 39.30 1.40
5362 5849 8.349245 CACTTTGGTACATCTTCACACAAATAA 58.651 33.333 0.00 0.00 39.30 1.40
5371 5858 4.350368 TGCTCACTTTGGTACATCTTCA 57.650 40.909 0.00 0.00 39.30 3.02
5395 5882 6.375945 TCATTCATACATCAATTTGTCCCG 57.624 37.500 0.00 0.00 0.00 5.14
5415 5902 6.418057 TTTTGGTTGAGTTAAAGGCATCAT 57.582 33.333 0.00 0.00 0.00 2.45
5463 5950 3.509967 TGTGCTCTTGCTACTTGCTACTA 59.490 43.478 0.00 0.00 43.37 1.82
5464 5951 2.300152 TGTGCTCTTGCTACTTGCTACT 59.700 45.455 0.00 0.00 43.37 2.57
5465 5952 2.688507 TGTGCTCTTGCTACTTGCTAC 58.311 47.619 0.00 0.00 43.37 3.58
5466 5953 3.525537 GATGTGCTCTTGCTACTTGCTA 58.474 45.455 0.00 0.00 43.37 3.49
5467 5954 2.354259 GATGTGCTCTTGCTACTTGCT 58.646 47.619 0.00 0.00 43.37 3.91
5468 5955 1.399791 GGATGTGCTCTTGCTACTTGC 59.600 52.381 0.00 0.00 40.48 4.01
5469 5956 2.703416 TGGATGTGCTCTTGCTACTTG 58.297 47.619 0.00 0.00 40.48 3.16
5470 5957 3.423539 TTGGATGTGCTCTTGCTACTT 57.576 42.857 0.00 0.00 40.48 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.