Multiple sequence alignment - TraesCS7B01G048300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G048300 chr7B 100.000 5598 0 0 2096 7693 48192450 48186853 0.000000e+00 10338.0
1 TraesCS7B01G048300 chr7B 100.000 1676 0 0 1 1676 48194545 48192870 0.000000e+00 3096.0
2 TraesCS7B01G048300 chr7B 97.576 165 4 0 7269 7433 154818515 154818351 4.540000e-72 283.0
3 TraesCS7B01G048300 chr7D 96.760 2870 78 6 3725 6582 94130281 94127415 0.000000e+00 4771.0
4 TraesCS7B01G048300 chr7D 95.879 1553 52 6 2096 3645 94131821 94130278 0.000000e+00 2503.0
5 TraesCS7B01G048300 chr7D 93.491 676 28 7 1017 1676 94132540 94131865 0.000000e+00 990.0
6 TraesCS7B01G048300 chr7D 92.771 166 10 2 6626 6791 94127412 94127249 9.980000e-59 239.0
7 TraesCS7B01G048300 chr7D 92.437 119 8 1 956 1074 94132831 94132714 1.330000e-37 169.0
8 TraesCS7B01G048300 chr7D 97.059 34 1 0 6636 6669 438070469 438070436 3.000000e-04 58.4
9 TraesCS7B01G048300 chr7A 95.032 2959 100 21 3735 6671 97577454 97574521 0.000000e+00 4606.0
10 TraesCS7B01G048300 chr7A 95.197 1395 47 13 2096 3486 97578948 97577570 0.000000e+00 2187.0
11 TraesCS7B01G048300 chr7A 92.885 759 37 7 930 1675 97579748 97578994 0.000000e+00 1086.0
12 TraesCS7B01G048300 chr7A 88.706 425 38 5 6854 7270 97574512 97574090 1.910000e-140 510.0
13 TraesCS7B01G048300 chr7A 95.349 172 6 2 7266 7435 115807520 115807691 9.840000e-69 272.0
14 TraesCS7B01G048300 chr7A 91.146 192 17 0 7434 7625 97574088 97573897 2.130000e-65 261.0
15 TraesCS7B01G048300 chr7A 94.783 115 6 0 3531 3645 97577570 97577456 6.130000e-41 180.0
16 TraesCS7B01G048300 chr2D 85.592 937 94 21 3 930 41799446 41798542 0.000000e+00 944.0
17 TraesCS7B01G048300 chr2D 86.522 460 53 6 6818 7271 527924293 527923837 1.490000e-136 497.0
18 TraesCS7B01G048300 chr2D 90.306 196 16 2 7239 7432 173511497 173511303 3.560000e-63 254.0
19 TraesCS7B01G048300 chr2D 93.939 99 5 1 3641 3738 296173761 296173663 1.730000e-31 148.0
20 TraesCS7B01G048300 chr1B 84.081 936 108 25 3 929 52751195 52752098 0.000000e+00 865.0
21 TraesCS7B01G048300 chr1B 81.702 235 26 8 6799 7026 18572426 18572202 6.130000e-41 180.0
22 TraesCS7B01G048300 chr4B 85.829 748 63 20 3 718 574002281 574003017 0.000000e+00 754.0
23 TraesCS7B01G048300 chr4B 84.072 722 66 28 3 718 477369072 477368394 0.000000e+00 651.0
24 TraesCS7B01G048300 chr4B 83.102 722 72 29 3 718 477386829 477386152 5.100000e-171 612.0
25 TraesCS7B01G048300 chr4B 96.703 91 2 1 3642 3732 1994969 1994880 4.810000e-32 150.0
26 TraesCS7B01G048300 chr4B 93.204 103 5 2 3636 3738 47448005 47448105 4.810000e-32 150.0
27 TraesCS7B01G048300 chr4B 93.939 99 3 3 3641 3739 502968148 502968053 6.220000e-31 147.0
28 TraesCS7B01G048300 chrUn 83.657 722 68 29 3 718 235743240 235742563 1.090000e-177 634.0
29 TraesCS7B01G048300 chrUn 85.356 478 34 15 3 452 397066601 397067070 5.440000e-126 462.0
30 TraesCS7B01G048300 chr5D 84.848 561 45 20 3 531 14648460 14647908 5.290000e-146 529.0
31 TraesCS7B01G048300 chr3D 86.860 449 51 5 6818 7261 431620912 431620467 5.360000e-136 496.0
32 TraesCS7B01G048300 chr3D 90.722 194 15 2 7241 7432 247487542 247487350 9.910000e-64 255.0
33 TraesCS7B01G048300 chr3D 91.150 113 7 3 3635 3745 32010616 32010727 4.810000e-32 150.0
34 TraesCS7B01G048300 chr1D 85.987 471 54 8 6808 7271 376811251 376811716 1.930000e-135 494.0
35 TraesCS7B01G048300 chr1D 90.306 196 16 2 7239 7432 104950448 104950254 3.560000e-63 254.0
36 TraesCS7B01G048300 chr1D 90.306 196 16 2 7239 7432 338575061 338574867 3.560000e-63 254.0
37 TraesCS7B01G048300 chr6D 83.465 508 51 18 399 902 89364412 89364890 7.090000e-120 442.0
38 TraesCS7B01G048300 chr6D 85.749 407 47 6 3 401 89363750 89364153 3.320000e-113 420.0
39 TraesCS7B01G048300 chr6D 78.462 260 27 11 6991 7249 142135092 142134861 8.050000e-30 143.0
40 TraesCS7B01G048300 chr2B 98.214 168 3 0 7268 7435 47632001 47631834 2.100000e-75 294.0
41 TraesCS7B01G048300 chr3B 97.576 165 4 0 7268 7432 8070662 8070498 4.540000e-72 283.0
42 TraesCS7B01G048300 chr4D 90.306 196 16 2 7239 7432 126359340 126359146 3.560000e-63 254.0
43 TraesCS7B01G048300 chr6B 96.739 92 3 0 3642 3733 411556564 411556655 3.720000e-33 154.0
44 TraesCS7B01G048300 chr6B 93.878 98 6 0 3634 3731 480382605 480382702 1.730000e-31 148.0
45 TraesCS7B01G048300 chr5B 93.814 97 6 0 3631 3727 511025568 511025664 6.220000e-31 147.0
46 TraesCS7B01G048300 chr4A 93.878 98 5 1 3642 3738 241152939 241153036 6.220000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G048300 chr7B 48186853 48194545 7692 True 6717.000000 10338 100.000000 1 7693 2 chr7B.!!$R2 7692
1 TraesCS7B01G048300 chr7D 94127249 94132831 5582 True 1734.400000 4771 94.267600 956 6791 5 chr7D.!!$R2 5835
2 TraesCS7B01G048300 chr7A 97573897 97579748 5851 True 1471.666667 4606 92.958167 930 7625 6 chr7A.!!$R1 6695
3 TraesCS7B01G048300 chr2D 41798542 41799446 904 True 944.000000 944 85.592000 3 930 1 chr2D.!!$R1 927
4 TraesCS7B01G048300 chr1B 52751195 52752098 903 False 865.000000 865 84.081000 3 929 1 chr1B.!!$F1 926
5 TraesCS7B01G048300 chr4B 574002281 574003017 736 False 754.000000 754 85.829000 3 718 1 chr4B.!!$F2 715
6 TraesCS7B01G048300 chr4B 477368394 477369072 678 True 651.000000 651 84.072000 3 718 1 chr4B.!!$R2 715
7 TraesCS7B01G048300 chr4B 477386152 477386829 677 True 612.000000 612 83.102000 3 718 1 chr4B.!!$R3 715
8 TraesCS7B01G048300 chrUn 235742563 235743240 677 True 634.000000 634 83.657000 3 718 1 chrUn.!!$R1 715
9 TraesCS7B01G048300 chr5D 14647908 14648460 552 True 529.000000 529 84.848000 3 531 1 chr5D.!!$R1 528
10 TraesCS7B01G048300 chr6D 89363750 89364890 1140 False 431.000000 442 84.607000 3 902 2 chr6D.!!$F1 899

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
677 980 0.882927 CTCGAAAAGACAACCGGCCA 60.883 55.000 0.0 0.0 0.00 5.36 F
1461 2010 0.034089 CCGCCTGAAGATCCCCTTTT 60.034 55.000 0.0 0.0 34.68 2.27 F
1621 2171 0.038983 TCGTCGCTGAATTGTTCCGA 60.039 50.000 0.0 0.0 0.00 4.55 F
2596 3153 0.536260 TTGCTGCCATTTATGCCCAC 59.464 50.000 0.0 0.0 0.00 4.61 F
3388 3946 1.205417 CCCACCTTGTTCATCATTGCC 59.795 52.381 0.0 0.0 0.00 4.52 F
5210 5775 1.071699 TGCCGGTCTGGATTTATAGCC 59.928 52.381 1.9 0.0 42.00 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1603 2153 0.366871 CTCGGAACAATTCAGCGACG 59.633 55.000 0.00 0.00 0.00 5.12 R
2559 3116 1.542915 CAATGTTGCCTCACCTTCAGG 59.457 52.381 0.00 0.00 42.17 3.86 R
3125 3683 2.290071 CGAGTAATGGAGGGGTGTGTTT 60.290 50.000 0.00 0.00 0.00 2.83 R
3710 4268 2.285707 AGTAGTACTCCCTCTGTCCCA 58.714 52.381 0.00 0.00 0.00 4.37 R
5355 5920 3.468071 TTAGTAGTCTCCCTTCTGGCA 57.532 47.619 0.00 0.00 0.00 4.92 R
6774 7360 0.178990 GCGGGAAATAGGGATTGCCT 60.179 55.000 1.13 1.13 40.41 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 48 7.543172 TGCTATCATGTTTCAGCAAGATTTTTC 59.457 33.333 9.66 0.00 40.87 2.29
66 69 2.093500 CCTGGATCGGTGAGATGTTTCA 60.093 50.000 0.00 0.00 40.26 2.69
148 153 3.955771 TGCTACAACCGACAAGTTTTC 57.044 42.857 0.00 0.00 0.00 2.29
189 195 2.769617 GTTGTGACGACGATGGCG 59.230 61.111 0.00 0.00 44.79 5.69
190 196 3.109547 TTGTGACGACGATGGCGC 61.110 61.111 0.00 0.00 42.48 6.53
199 232 1.259316 GACGATGGCGCATGTTTTTC 58.741 50.000 10.83 0.00 42.48 2.29
203 236 2.253603 GATGGCGCATGTTTTTCTGTC 58.746 47.619 10.83 0.00 0.00 3.51
208 241 2.856720 GCGCATGTTTTTCTGTCGGAAA 60.857 45.455 0.30 2.52 41.58 3.13
303 338 4.815846 CCAAATTGTTGCCTTTTTGCTACT 59.184 37.500 0.00 0.00 37.76 2.57
306 341 6.405278 AATTGTTGCCTTTTTGCTACTACT 57.595 33.333 0.00 0.00 37.76 2.57
311 346 1.130561 CCTTTTTGCTACTACTGGCGC 59.869 52.381 0.00 0.00 0.00 6.53
370 405 1.151172 GGCGTTTTTGTGTTGCTGGG 61.151 55.000 0.00 0.00 0.00 4.45
456 754 3.512033 TTTTGCTACCAACTGCGTTTT 57.488 38.095 0.00 0.00 0.00 2.43
475 773 5.335583 CGTTTTGATTTGCTGGAACCATCTA 60.336 40.000 0.00 0.00 0.00 1.98
477 775 5.840243 TTGATTTGCTGGAACCATCTATG 57.160 39.130 0.00 0.00 0.00 2.23
545 848 3.961414 GGGCGAGGTGGTGGGAAA 61.961 66.667 0.00 0.00 0.00 3.13
553 856 0.953960 GGTGGTGGGAAACACTAGCG 60.954 60.000 0.00 0.00 46.50 4.26
604 907 0.899720 GAGGGGACGGACATGTGTTA 59.100 55.000 1.15 0.00 0.00 2.41
620 923 2.727392 TTACACGATGCGGAGGGGG 61.727 63.158 0.00 0.00 0.00 5.40
676 979 1.866925 CTCGAAAAGACAACCGGCC 59.133 57.895 0.00 0.00 0.00 6.13
677 980 0.882927 CTCGAAAAGACAACCGGCCA 60.883 55.000 0.00 0.00 0.00 5.36
678 981 1.161563 TCGAAAAGACAACCGGCCAC 61.162 55.000 0.00 0.00 0.00 5.01
679 982 1.281656 GAAAAGACAACCGGCCACG 59.718 57.895 0.00 0.00 40.55 4.94
808 1112 4.753662 CGACGGGGAGGAGGGACA 62.754 72.222 0.00 0.00 0.00 4.02
826 1130 2.291043 ACACGTGGGAGGGGATGAC 61.291 63.158 21.57 0.00 0.00 3.06
829 1133 2.901042 GTGGGAGGGGATGACGTC 59.099 66.667 9.11 9.11 0.00 4.34
834 1138 1.601419 GGAGGGGATGACGTCGTTCA 61.601 60.000 17.78 0.00 0.00 3.18
837 1141 1.429148 GGGGATGACGTCGTTCATGC 61.429 60.000 17.78 15.66 42.13 4.06
846 1150 3.531538 ACGTCGTTCATGCATAAGGATT 58.468 40.909 0.00 0.00 0.00 3.01
854 1158 5.029807 TCATGCATAAGGATTTGACGGTA 57.970 39.130 0.00 0.00 0.00 4.02
863 1168 9.104965 CATAAGGATTTGACGGTACAGATAAAA 57.895 33.333 0.00 0.00 0.00 1.52
947 1252 9.950680 CATTGCCCTACTTTATATGTAAAACAG 57.049 33.333 0.00 0.00 29.86 3.16
958 1263 3.678056 TGTAAAACAGGACGAGATGCT 57.322 42.857 0.00 0.00 0.00 3.79
986 1291 5.485353 TCAGGATATCCACACACTTCTTCTT 59.515 40.000 23.81 0.00 38.89 2.52
999 1304 4.570772 CACTTCTTCTTTGTCGAACCAAGA 59.429 41.667 0.00 0.00 0.00 3.02
1004 1500 0.882927 TTTGTCGAACCAAGAGCCGG 60.883 55.000 0.00 0.00 0.00 6.13
1007 1503 0.883370 GTCGAACCAAGAGCCGGTTT 60.883 55.000 1.90 0.00 46.80 3.27
1222 1766 2.757917 AGCTCCTCGTGCTCTCCC 60.758 66.667 0.00 0.00 35.67 4.30
1272 1816 0.193574 TCTCCCACCTCCCTTGTTCT 59.806 55.000 0.00 0.00 0.00 3.01
1291 1835 4.778143 CCGTTCTTCCCAGCCCCG 62.778 72.222 0.00 0.00 0.00 5.73
1404 1950 0.534203 GATGTGTTGGTGGTGACGGT 60.534 55.000 0.00 0.00 0.00 4.83
1461 2010 0.034089 CCGCCTGAAGATCCCCTTTT 60.034 55.000 0.00 0.00 34.68 2.27
1493 2042 3.157252 GAGGGGAGATGCGCTGGA 61.157 66.667 9.73 0.00 0.00 3.86
1543 2092 4.021229 TCTTGTAGCCGAAAGATCTGGTA 58.979 43.478 0.00 0.00 0.00 3.25
1603 2153 1.400530 ATCCCTGATCCGGGTTCGTC 61.401 60.000 20.59 0.00 44.95 4.20
1621 2171 0.038983 TCGTCGCTGAATTGTTCCGA 60.039 50.000 0.00 0.00 0.00 4.55
1638 2189 2.552315 TCCGAGCCTGTTGTCATTTTTC 59.448 45.455 0.00 0.00 0.00 2.29
2125 2679 1.094073 GTGAGCTCAATGCCGATGCT 61.094 55.000 20.19 0.00 44.23 3.79
2139 2693 1.089920 GATGCTGGTGGTTGTGCTAG 58.910 55.000 0.00 0.00 0.00 3.42
2162 2716 2.117156 CCTTGGAGCAATGGAGCCG 61.117 63.158 0.00 0.00 34.23 5.52
2163 2717 2.751436 TTGGAGCAATGGAGCCGC 60.751 61.111 0.00 0.00 34.23 6.53
2165 2719 3.207669 GGAGCAATGGAGCCGCTG 61.208 66.667 0.00 0.00 35.75 5.18
2166 2720 2.437359 GAGCAATGGAGCCGCTGT 60.437 61.111 0.00 0.00 35.75 4.40
2193 2749 4.436998 GACAGGGGACAGCGACCG 62.437 72.222 0.00 0.00 0.00 4.79
2212 2769 3.899980 ACCGGTTTCTCCTAGTACTGTTT 59.100 43.478 0.00 0.00 0.00 2.83
2237 2794 3.638160 CCATTATTACTGTGCCTGCCAAT 59.362 43.478 0.00 0.00 0.00 3.16
2325 2882 4.041723 CGTTTCTTGGTTCAATTGTGGAC 58.958 43.478 5.13 3.39 31.66 4.02
2347 2904 4.826733 ACATTGTCTTGTGTAAAGATGGCA 59.173 37.500 0.00 0.00 0.00 4.92
2440 2997 6.432783 TGTTTGTACTCTTTAATCCATGTGGG 59.567 38.462 0.00 0.00 35.41 4.61
2561 3118 8.482128 TGTGTCAATTTGAGGTTTATTTTTCCT 58.518 29.630 0.00 0.00 0.00 3.36
2571 3128 5.775195 AGGTTTATTTTTCCTGAAGGTGAGG 59.225 40.000 0.00 0.00 36.34 3.86
2596 3153 0.536260 TTGCTGCCATTTATGCCCAC 59.464 50.000 0.00 0.00 0.00 4.61
2716 3274 2.739609 GCTATGCCATTTTGGTGCTTCC 60.740 50.000 0.00 0.00 40.46 3.46
2808 3366 6.782000 TGAATTCCCCTACCATATCAATTTGG 59.218 38.462 2.27 0.00 39.02 3.28
2877 3435 4.133078 CTCATACCCTTGGCTTCAGAATC 58.867 47.826 0.00 0.00 0.00 2.52
2885 3443 4.437239 CTTGGCTTCAGAATCGTATGACT 58.563 43.478 0.00 0.00 0.00 3.41
2940 3498 1.471153 GGCGAGTCCTTAGTAAGTGGC 60.471 57.143 9.05 3.74 0.00 5.01
3005 3563 5.072329 CCTAGGTATGATGGGTGACTCATTT 59.928 44.000 0.00 0.00 34.14 2.32
3350 3908 2.267324 GCAGAGGACAGGTGAGCC 59.733 66.667 0.00 0.00 0.00 4.70
3352 3910 2.284995 AGAGGACAGGTGAGCCCC 60.285 66.667 0.00 0.00 34.57 5.80
3353 3911 3.403558 GAGGACAGGTGAGCCCCC 61.404 72.222 0.00 0.00 34.57 5.40
3354 3912 3.933542 GAGGACAGGTGAGCCCCCT 62.934 68.421 0.00 0.00 33.93 4.79
3387 3945 2.165030 CTCCCACCTTGTTCATCATTGC 59.835 50.000 0.00 0.00 0.00 3.56
3388 3946 1.205417 CCCACCTTGTTCATCATTGCC 59.795 52.381 0.00 0.00 0.00 4.52
3389 3947 2.173519 CCACCTTGTTCATCATTGCCT 58.826 47.619 0.00 0.00 0.00 4.75
3390 3948 2.564062 CCACCTTGTTCATCATTGCCTT 59.436 45.455 0.00 0.00 0.00 4.35
3391 3949 3.581755 CACCTTGTTCATCATTGCCTTG 58.418 45.455 0.00 0.00 0.00 3.61
3410 3968 5.221126 GCCTTGGTATCCAATTCTTGATGAC 60.221 44.000 1.58 0.00 43.07 3.06
3482 4040 6.281405 ACTCGGTATACAGAAATGGATTGAC 58.719 40.000 7.15 0.00 0.00 3.18
3499 4057 6.446434 TGGATTGACCATAATTTTCCCCAAAT 59.554 34.615 0.00 0.00 44.64 2.32
3582 4140 3.010696 TCCCATATATCTGAGGTCGCTCT 59.989 47.826 0.00 0.00 0.00 4.09
3595 4153 3.056465 AGGTCGCTCTGGTCTTAGAAAAG 60.056 47.826 0.00 0.00 0.00 2.27
3645 4203 6.086871 GGAAGTAAGCTGCAAAATGTTACTC 58.913 40.000 1.02 1.49 33.75 2.59
3646 4204 5.629079 AGTAAGCTGCAAAATGTTACTCC 57.371 39.130 1.02 0.00 29.84 3.85
3647 4205 3.942130 AAGCTGCAAAATGTTACTCCC 57.058 42.857 1.02 0.00 0.00 4.30
3648 4206 3.160679 AGCTGCAAAATGTTACTCCCT 57.839 42.857 1.02 0.00 0.00 4.20
3649 4207 3.084786 AGCTGCAAAATGTTACTCCCTC 58.915 45.455 1.02 0.00 0.00 4.30
3650 4208 3.084786 GCTGCAAAATGTTACTCCCTCT 58.915 45.455 0.00 0.00 0.00 3.69
3651 4209 3.119708 GCTGCAAAATGTTACTCCCTCTG 60.120 47.826 0.00 0.00 0.00 3.35
3652 4210 4.074970 CTGCAAAATGTTACTCCCTCTGT 58.925 43.478 0.00 0.00 0.00 3.41
3653 4211 4.072131 TGCAAAATGTTACTCCCTCTGTC 58.928 43.478 0.00 0.00 0.00 3.51
3654 4212 3.440522 GCAAAATGTTACTCCCTCTGTCC 59.559 47.826 0.00 0.00 0.00 4.02
3655 4213 4.010349 CAAAATGTTACTCCCTCTGTCCC 58.990 47.826 0.00 0.00 0.00 4.46
3656 4214 2.642171 ATGTTACTCCCTCTGTCCCA 57.358 50.000 0.00 0.00 0.00 4.37
3657 4215 2.642171 TGTTACTCCCTCTGTCCCAT 57.358 50.000 0.00 0.00 0.00 4.00
3658 4216 3.769189 TGTTACTCCCTCTGTCCCATA 57.231 47.619 0.00 0.00 0.00 2.74
3659 4217 4.069312 TGTTACTCCCTCTGTCCCATAA 57.931 45.455 0.00 0.00 0.00 1.90
3660 4218 4.631234 TGTTACTCCCTCTGTCCCATAAT 58.369 43.478 0.00 0.00 0.00 1.28
3661 4219 5.784023 TGTTACTCCCTCTGTCCCATAATA 58.216 41.667 0.00 0.00 0.00 0.98
3662 4220 6.390504 TGTTACTCCCTCTGTCCCATAATAT 58.609 40.000 0.00 0.00 0.00 1.28
3663 4221 7.541074 TGTTACTCCCTCTGTCCCATAATATA 58.459 38.462 0.00 0.00 0.00 0.86
3664 4222 8.014263 TGTTACTCCCTCTGTCCCATAATATAA 58.986 37.037 0.00 0.00 0.00 0.98
3665 4223 8.532819 GTTACTCCCTCTGTCCCATAATATAAG 58.467 40.741 0.00 0.00 0.00 1.73
3666 4224 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
3667 4225 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
3668 4226 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
3669 4227 6.210784 TCCCTCTGTCCCATAATATAAGAACG 59.789 42.308 0.00 0.00 0.00 3.95
3670 4228 6.014499 CCCTCTGTCCCATAATATAAGAACGT 60.014 42.308 0.00 0.00 0.00 3.99
3671 4229 7.442656 CCTCTGTCCCATAATATAAGAACGTT 58.557 38.462 0.00 0.00 0.00 3.99
3672 4230 7.931948 CCTCTGTCCCATAATATAAGAACGTTT 59.068 37.037 0.46 0.00 0.00 3.60
3673 4231 9.326413 CTCTGTCCCATAATATAAGAACGTTTT 57.674 33.333 0.46 0.00 0.00 2.43
3674 4232 9.675464 TCTGTCCCATAATATAAGAACGTTTTT 57.325 29.630 9.22 9.22 0.00 1.94
3675 4233 9.716507 CTGTCCCATAATATAAGAACGTTTTTG 57.283 33.333 13.87 0.00 0.00 2.44
3676 4234 9.451002 TGTCCCATAATATAAGAACGTTTTTGA 57.549 29.630 13.87 2.81 0.00 2.69
3677 4235 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
3678 4236 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
3679 4237 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
3686 4244 8.876275 ATAAGAACGTTTTTGACACTAGTGTA 57.124 30.769 27.98 11.50 45.05 2.90
3687 4245 6.823678 AGAACGTTTTTGACACTAGTGTAG 57.176 37.500 27.98 14.79 45.05 2.74
3688 4246 6.335777 AGAACGTTTTTGACACTAGTGTAGT 58.664 36.000 27.98 15.35 45.05 2.73
3689 4247 6.815142 AGAACGTTTTTGACACTAGTGTAGTT 59.185 34.615 27.98 21.29 45.05 2.24
3690 4248 6.973229 ACGTTTTTGACACTAGTGTAGTTT 57.027 33.333 27.98 5.50 45.05 2.66
3691 4249 6.997222 ACGTTTTTGACACTAGTGTAGTTTC 58.003 36.000 27.98 15.61 45.05 2.78
3692 4250 6.591062 ACGTTTTTGACACTAGTGTAGTTTCA 59.409 34.615 27.98 17.99 45.05 2.69
3698 4256 6.996106 TGACACTAGTGTAGTTTCAAAAACG 58.004 36.000 27.98 0.00 45.05 3.60
3699 4257 6.591062 TGACACTAGTGTAGTTTCAAAAACGT 59.409 34.615 27.98 0.00 45.05 3.99
3700 4258 7.118101 TGACACTAGTGTAGTTTCAAAAACGTT 59.882 33.333 27.98 0.00 45.05 3.99
3701 4259 7.458677 ACACTAGTGTAGTTTCAAAAACGTTC 58.541 34.615 26.91 0.00 42.90 3.95
3702 4260 7.332678 ACACTAGTGTAGTTTCAAAAACGTTCT 59.667 33.333 26.91 0.00 42.90 3.01
3703 4261 8.173130 CACTAGTGTAGTTTCAAAAACGTTCTT 58.827 33.333 15.06 0.00 36.76 2.52
3704 4262 9.369904 ACTAGTGTAGTTTCAAAAACGTTCTTA 57.630 29.630 0.00 0.00 34.86 2.10
3747 4305 9.615295 GAGTACTACTTTCTCTTAGTTGACTTG 57.385 37.037 0.00 0.00 30.97 3.16
3866 4427 8.567285 AGAATATTTCTTTGTTCTGGTACCAG 57.433 34.615 32.61 32.61 40.16 4.00
3879 4440 2.027561 TGGTACCAGCTCTAAACGCAAT 60.028 45.455 11.60 0.00 0.00 3.56
4250 4814 7.042725 GGTGAAACAAATAAGGAAGCTTTTGAC 60.043 37.037 12.12 0.00 39.98 3.18
4991 5556 6.145371 GGTTGTTACTTTACAATTGCCACATG 59.855 38.462 5.05 0.00 39.93 3.21
5012 5577 8.378421 CACATGCTGATATATTTACTGATGTCG 58.622 37.037 0.00 0.00 0.00 4.35
5196 5761 2.708216 TTGTGATGTCATATGCCGGT 57.292 45.000 1.90 0.00 0.00 5.28
5210 5775 1.071699 TGCCGGTCTGGATTTATAGCC 59.928 52.381 1.90 0.00 42.00 3.93
5355 5920 1.071699 TGAAGGCGTCCTAAGCAAACT 59.928 47.619 0.00 0.00 36.08 2.66
5453 6018 4.691216 GGTGAGTTCAAATACCAGACAGAC 59.309 45.833 0.00 0.00 33.42 3.51
5459 6024 8.362464 AGTTCAAATACCAGACAGACTATGTA 57.638 34.615 0.00 0.00 44.17 2.29
5513 6078 9.753674 AAATTCCTAGTTCATCAAACCTATCAA 57.246 29.630 0.00 0.00 38.76 2.57
5642 6212 0.898320 AAGGTCACCATGTCTCGGAG 59.102 55.000 0.00 0.00 0.00 4.63
5657 6227 1.540267 TCGGAGCGTAGATGCCTATTC 59.460 52.381 0.00 0.00 34.65 1.75
5706 6276 8.218338 ACGCAGATTATTGAGAATGAGAAAAT 57.782 30.769 0.00 0.00 0.00 1.82
5748 6318 0.885196 TCCAAATTTTTCCCGAGGCG 59.115 50.000 0.00 0.00 0.00 5.52
5797 6367 6.953520 AGAAACAATTCCCCATTTACAGATCA 59.046 34.615 0.00 0.00 36.12 2.92
5901 6471 2.874014 TGTTTGGAGATGGAATGCACA 58.126 42.857 0.00 0.00 0.00 4.57
6176 6750 2.435805 GCTTCCATGGACTACCTCATCA 59.564 50.000 15.91 0.00 37.04 3.07
6254 6828 3.449227 CGCCTACGCTCCACCTCA 61.449 66.667 0.00 0.00 0.00 3.86
6342 6916 2.049063 GCAGGCTTGACGAGACGT 60.049 61.111 0.00 0.00 45.10 4.34
6359 6933 3.241530 TTGCCCTGCCTCGTCAGT 61.242 61.111 0.00 0.00 32.32 3.41
6466 7040 0.038251 TTTTGTTGGCGTTGTGTGCA 60.038 45.000 0.00 0.00 0.00 4.57
6555 7141 8.641499 TCTGTTTGTTTGTTTGTATGATTTCC 57.359 30.769 0.00 0.00 0.00 3.13
6557 7143 9.743057 CTGTTTGTTTGTTTGTATGATTTCCTA 57.257 29.630 0.00 0.00 0.00 2.94
6575 7161 9.713713 GATTTCCTACTCAGTTTCTTCTAAGTT 57.286 33.333 0.00 0.00 0.00 2.66
6577 7163 9.901172 TTTCCTACTCAGTTTCTTCTAAGTTTT 57.099 29.630 0.00 0.00 0.00 2.43
6578 7164 9.901172 TTCCTACTCAGTTTCTTCTAAGTTTTT 57.099 29.630 0.00 0.00 0.00 1.94
6695 7281 1.613925 CACTCAGAAGGGTTCGACTCA 59.386 52.381 0.00 0.00 34.02 3.41
6733 7319 2.430921 GGCGTGACTGAGACCGTG 60.431 66.667 0.00 0.00 0.00 4.94
6760 7346 0.109132 GAACAAAGCGGGGCAATCTG 60.109 55.000 0.00 0.00 0.00 2.90
6765 7351 0.890683 AAGCGGGGCAATCTGAAAAG 59.109 50.000 0.00 0.00 0.00 2.27
6771 7357 3.989817 CGGGGCAATCTGAAAAGAAAAAG 59.010 43.478 0.00 0.00 0.00 2.27
6772 7358 3.748048 GGGGCAATCTGAAAAGAAAAAGC 59.252 43.478 0.00 0.00 0.00 3.51
6773 7359 4.503817 GGGGCAATCTGAAAAGAAAAAGCT 60.504 41.667 0.00 0.00 0.00 3.74
6774 7360 5.279456 GGGGCAATCTGAAAAGAAAAAGCTA 60.279 40.000 0.00 0.00 0.00 3.32
6785 7371 4.862641 AGAAAAAGCTAGGCAATCCCTA 57.137 40.909 0.00 0.00 44.08 3.53
6791 7377 2.376855 AGCTAGGCAATCCCTATTTCCC 59.623 50.000 0.00 0.00 45.11 3.97
6792 7378 2.876079 GCTAGGCAATCCCTATTTCCCG 60.876 54.545 0.00 0.00 45.11 5.14
6793 7379 0.178990 AGGCAATCCCTATTTCCCGC 60.179 55.000 0.00 0.00 44.08 6.13
6794 7380 1.515521 GGCAATCCCTATTTCCCGCG 61.516 60.000 0.00 0.00 0.00 6.46
6795 7381 0.818040 GCAATCCCTATTTCCCGCGT 60.818 55.000 4.92 0.00 0.00 6.01
6796 7382 1.541670 GCAATCCCTATTTCCCGCGTA 60.542 52.381 4.92 0.00 0.00 4.42
6797 7383 2.413837 CAATCCCTATTTCCCGCGTAG 58.586 52.381 4.92 0.00 0.00 3.51
6798 7384 0.974383 ATCCCTATTTCCCGCGTAGG 59.026 55.000 11.70 11.70 40.63 3.18
6799 7385 0.397535 TCCCTATTTCCCGCGTAGGT 60.398 55.000 15.99 0.00 38.74 3.08
6800 7386 1.133513 TCCCTATTTCCCGCGTAGGTA 60.134 52.381 15.99 0.68 38.74 3.08
6801 7387 1.271656 CCCTATTTCCCGCGTAGGTAG 59.728 57.143 15.99 7.21 38.74 3.18
6802 7388 2.233271 CCTATTTCCCGCGTAGGTAGA 58.767 52.381 4.92 0.00 38.74 2.59
6803 7389 2.824341 CCTATTTCCCGCGTAGGTAGAT 59.176 50.000 4.92 0.00 38.74 1.98
6804 7390 3.257624 CCTATTTCCCGCGTAGGTAGATT 59.742 47.826 4.92 0.00 38.74 2.40
6805 7391 3.832615 ATTTCCCGCGTAGGTAGATTT 57.167 42.857 4.92 0.00 38.74 2.17
6806 7392 3.615224 TTTCCCGCGTAGGTAGATTTT 57.385 42.857 4.92 0.00 38.74 1.82
6807 7393 3.615224 TTCCCGCGTAGGTAGATTTTT 57.385 42.857 4.92 0.00 38.74 1.94
6827 7413 2.380064 TTTTGAGCAATCCCCACACT 57.620 45.000 0.00 0.00 0.00 3.55
6828 7414 2.380064 TTTGAGCAATCCCCACACTT 57.620 45.000 0.00 0.00 0.00 3.16
6829 7415 2.380064 TTGAGCAATCCCCACACTTT 57.620 45.000 0.00 0.00 0.00 2.66
6830 7416 3.517296 TTGAGCAATCCCCACACTTTA 57.483 42.857 0.00 0.00 0.00 1.85
6831 7417 3.737559 TGAGCAATCCCCACACTTTAT 57.262 42.857 0.00 0.00 0.00 1.40
6832 7418 4.046286 TGAGCAATCCCCACACTTTATT 57.954 40.909 0.00 0.00 0.00 1.40
6833 7419 5.186256 TGAGCAATCCCCACACTTTATTA 57.814 39.130 0.00 0.00 0.00 0.98
6834 7420 5.575157 TGAGCAATCCCCACACTTTATTAA 58.425 37.500 0.00 0.00 0.00 1.40
6835 7421 6.194235 TGAGCAATCCCCACACTTTATTAAT 58.806 36.000 0.00 0.00 0.00 1.40
6836 7422 6.667414 TGAGCAATCCCCACACTTTATTAATT 59.333 34.615 0.00 0.00 0.00 1.40
6837 7423 7.180051 TGAGCAATCCCCACACTTTATTAATTT 59.820 33.333 0.00 0.00 0.00 1.82
6838 7424 8.602472 AGCAATCCCCACACTTTATTAATTTA 57.398 30.769 0.00 0.00 0.00 1.40
6839 7425 9.041354 AGCAATCCCCACACTTTATTAATTTAA 57.959 29.630 0.00 0.00 0.00 1.52
6840 7426 9.660180 GCAATCCCCACACTTTATTAATTTAAA 57.340 29.630 0.00 0.00 0.00 1.52
6842 7428 9.884636 AATCCCCACACTTTATTAATTTAAAGC 57.115 29.630 9.63 0.00 41.04 3.51
6843 7429 8.423906 TCCCCACACTTTATTAATTTAAAGCA 57.576 30.769 9.63 0.00 41.04 3.91
6844 7430 8.871125 TCCCCACACTTTATTAATTTAAAGCAA 58.129 29.630 9.63 0.00 41.04 3.91
6845 7431 9.495572 CCCCACACTTTATTAATTTAAAGCAAA 57.504 29.630 9.63 0.00 41.04 3.68
6859 7445 9.435688 AATTTAAAGCAAAATTCACAGGGATAC 57.564 29.630 0.00 0.00 34.71 2.24
6860 7446 7.531857 TTAAAGCAAAATTCACAGGGATACA 57.468 32.000 0.00 0.00 39.74 2.29
6861 7447 6.418057 AAAGCAAAATTCACAGGGATACAA 57.582 33.333 0.00 0.00 39.74 2.41
6862 7448 6.418057 AAGCAAAATTCACAGGGATACAAA 57.582 33.333 0.00 0.00 39.74 2.83
6881 7467 2.568546 AGGGGTCATGTGGATGTAGA 57.431 50.000 0.00 0.00 0.00 2.59
6887 7473 3.434167 GGTCATGTGGATGTAGAAGCCAT 60.434 47.826 0.00 0.00 33.66 4.40
6901 7487 4.540153 CCATAAGTGGCGACCCTG 57.460 61.111 0.00 0.00 39.01 4.45
6902 7488 1.904771 CCATAAGTGGCGACCCTGA 59.095 57.895 0.00 0.00 39.01 3.86
6904 7490 0.179073 CATAAGTGGCGACCCTGAGG 60.179 60.000 0.00 0.00 40.04 3.86
6948 7541 0.884704 ATTGTGTGCCGTTCGAAGCT 60.885 50.000 10.33 0.00 0.00 3.74
6956 7549 1.515521 CCGTTCGAAGCTTGGCCTTT 61.516 55.000 2.10 0.00 0.00 3.11
6969 7562 4.327087 GCTTGGCCTTTGAACATAAAATCG 59.673 41.667 3.32 0.00 0.00 3.34
7031 7624 2.550830 ATTGTCATATGCGGACCTCC 57.449 50.000 0.00 0.00 34.36 4.30
7035 7628 2.364324 TGTCATATGCGGACCTCCTAAC 59.636 50.000 0.00 0.00 34.36 2.34
7038 7631 0.263765 TATGCGGACCTCCTAACCCT 59.736 55.000 0.00 0.00 0.00 4.34
7074 7667 3.160545 CACAATCGGTTTGTAATCGCAC 58.839 45.455 4.26 0.00 46.90 5.34
7084 7677 0.315059 GTAATCGCACGCAATCACCG 60.315 55.000 0.00 0.00 0.00 4.94
7095 7688 2.159430 CGCAATCACCGAATGACTCAAA 59.841 45.455 0.00 0.00 41.24 2.69
7096 7689 3.364864 CGCAATCACCGAATGACTCAAAA 60.365 43.478 0.00 0.00 41.24 2.44
7097 7690 4.161333 GCAATCACCGAATGACTCAAAAG 58.839 43.478 0.00 0.00 41.24 2.27
7098 7691 4.083324 GCAATCACCGAATGACTCAAAAGA 60.083 41.667 0.00 0.00 41.24 2.52
7099 7692 5.385617 CAATCACCGAATGACTCAAAAGAC 58.614 41.667 0.00 0.00 41.24 3.01
7102 7695 4.878971 TCACCGAATGACTCAAAAGACAAA 59.121 37.500 0.00 0.00 31.07 2.83
7103 7696 5.530915 TCACCGAATGACTCAAAAGACAAAT 59.469 36.000 0.00 0.00 31.07 2.32
7104 7697 5.853282 CACCGAATGACTCAAAAGACAAATC 59.147 40.000 0.00 0.00 31.07 2.17
7105 7698 5.530915 ACCGAATGACTCAAAAGACAAATCA 59.469 36.000 0.00 0.00 31.07 2.57
7130 7723 1.208052 GCTAGTGCCAAGGTCTCATGA 59.792 52.381 0.00 0.00 0.00 3.07
7138 7731 3.877559 CCAAGGTCTCATGACATGCTAA 58.122 45.455 10.76 0.00 44.61 3.09
7148 7741 2.715046 TGACATGCTAAGGCTTCAAGG 58.285 47.619 1.30 0.00 39.59 3.61
7168 7761 3.201708 AGGCTTGCTGGATTATTCACTCT 59.798 43.478 0.00 0.00 0.00 3.24
7169 7762 3.314635 GGCTTGCTGGATTATTCACTCTG 59.685 47.826 0.00 0.00 0.00 3.35
7202 7795 2.797156 CGCTGAAGATCCGAGGTAATTG 59.203 50.000 0.00 0.00 0.00 2.32
7207 7800 4.407621 TGAAGATCCGAGGTAATTGCCTTA 59.592 41.667 16.88 6.15 39.34 2.69
7220 7813 5.511234 AATTGCCTTATTCATCTCTGCAC 57.489 39.130 0.00 0.00 0.00 4.57
7221 7814 3.632643 TGCCTTATTCATCTCTGCACA 57.367 42.857 0.00 0.00 0.00 4.57
7242 7835 3.667282 CAGCAGCTGCACCCACAC 61.667 66.667 38.24 8.57 45.16 3.82
7256 7849 1.139654 CCCACACGACCATCATGAGAT 59.860 52.381 0.09 0.00 33.87 2.75
7261 7854 4.037327 CACACGACCATCATGAGATAGTCT 59.963 45.833 0.09 0.00 39.71 3.24
7262 7855 4.037327 ACACGACCATCATGAGATAGTCTG 59.963 45.833 0.09 7.88 39.71 3.51
7268 7861 4.223255 CCATCATGAGATAGTCTGCCATCT 59.777 45.833 0.09 0.00 34.19 2.90
7269 7862 5.421374 CCATCATGAGATAGTCTGCCATCTA 59.579 44.000 0.09 0.00 31.63 1.98
7270 7863 5.973899 TCATGAGATAGTCTGCCATCTAC 57.026 43.478 0.00 0.00 31.63 2.59
7271 7864 5.639139 TCATGAGATAGTCTGCCATCTACT 58.361 41.667 0.00 0.00 31.63 2.57
7272 7865 6.784031 TCATGAGATAGTCTGCCATCTACTA 58.216 40.000 0.00 0.00 31.63 1.82
7273 7866 6.657117 TCATGAGATAGTCTGCCATCTACTAC 59.343 42.308 0.00 0.00 31.63 2.73
7274 7867 5.317808 TGAGATAGTCTGCCATCTACTACC 58.682 45.833 0.00 0.00 31.63 3.18
7275 7868 5.073827 TGAGATAGTCTGCCATCTACTACCT 59.926 44.000 0.00 0.00 31.63 3.08
7276 7869 5.566469 AGATAGTCTGCCATCTACTACCTC 58.434 45.833 0.00 0.00 29.66 3.85
7277 7870 2.952116 AGTCTGCCATCTACTACCTCC 58.048 52.381 0.00 0.00 0.00 4.30
7278 7871 1.609555 GTCTGCCATCTACTACCTCCG 59.390 57.143 0.00 0.00 0.00 4.63
7279 7872 1.214673 TCTGCCATCTACTACCTCCGT 59.785 52.381 0.00 0.00 0.00 4.69
7280 7873 2.032620 CTGCCATCTACTACCTCCGTT 58.967 52.381 0.00 0.00 0.00 4.44
7281 7874 2.029623 TGCCATCTACTACCTCCGTTC 58.970 52.381 0.00 0.00 0.00 3.95
7282 7875 1.340568 GCCATCTACTACCTCCGTTCC 59.659 57.143 0.00 0.00 0.00 3.62
7283 7876 2.946785 CCATCTACTACCTCCGTTCCT 58.053 52.381 0.00 0.00 0.00 3.36
7284 7877 3.749954 GCCATCTACTACCTCCGTTCCTA 60.750 52.174 0.00 0.00 0.00 2.94
7285 7878 4.467769 CCATCTACTACCTCCGTTCCTAA 58.532 47.826 0.00 0.00 0.00 2.69
7286 7879 4.891756 CCATCTACTACCTCCGTTCCTAAA 59.108 45.833 0.00 0.00 0.00 1.85
7287 7880 5.539193 CCATCTACTACCTCCGTTCCTAAAT 59.461 44.000 0.00 0.00 0.00 1.40
7288 7881 6.718454 CCATCTACTACCTCCGTTCCTAAATA 59.282 42.308 0.00 0.00 0.00 1.40
7289 7882 7.232127 CCATCTACTACCTCCGTTCCTAAATAA 59.768 40.741 0.00 0.00 0.00 1.40
7290 7883 8.804204 CATCTACTACCTCCGTTCCTAAATAAT 58.196 37.037 0.00 0.00 0.00 1.28
7291 7884 8.773033 TCTACTACCTCCGTTCCTAAATAATT 57.227 34.615 0.00 0.00 0.00 1.40
7292 7885 8.636213 TCTACTACCTCCGTTCCTAAATAATTG 58.364 37.037 0.00 0.00 0.00 2.32
7293 7886 7.191593 ACTACCTCCGTTCCTAAATAATTGT 57.808 36.000 0.00 0.00 0.00 2.71
7294 7887 7.270779 ACTACCTCCGTTCCTAAATAATTGTC 58.729 38.462 0.00 0.00 0.00 3.18
7295 7888 6.309389 ACCTCCGTTCCTAAATAATTGTCT 57.691 37.500 0.00 0.00 0.00 3.41
7296 7889 6.718294 ACCTCCGTTCCTAAATAATTGTCTT 58.282 36.000 0.00 0.00 0.00 3.01
7297 7890 7.173032 ACCTCCGTTCCTAAATAATTGTCTTT 58.827 34.615 0.00 0.00 0.00 2.52
7298 7891 7.336176 ACCTCCGTTCCTAAATAATTGTCTTTC 59.664 37.037 0.00 0.00 0.00 2.62
7299 7892 7.553044 CCTCCGTTCCTAAATAATTGTCTTTCT 59.447 37.037 0.00 0.00 0.00 2.52
7300 7893 9.595823 CTCCGTTCCTAAATAATTGTCTTTCTA 57.404 33.333 0.00 0.00 0.00 2.10
7301 7894 9.595823 TCCGTTCCTAAATAATTGTCTTTCTAG 57.404 33.333 0.00 0.00 0.00 2.43
7302 7895 9.595823 CCGTTCCTAAATAATTGTCTTTCTAGA 57.404 33.333 0.00 0.00 0.00 2.43
7315 7908 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
7316 7909 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
7317 7910 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
7318 7911 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
7319 7912 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
7320 7913 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
7321 7914 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
7322 7915 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
7323 7916 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
7325 7918 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
7326 7919 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
7327 7920 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
7328 7921 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
7329 7922 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
7330 7923 5.010314 TTCAACAAGTGACTACATACGGAGT 59.990 40.000 0.00 0.00 39.84 3.85
7331 7924 6.207221 TTCAACAAGTGACTACATACGGAGTA 59.793 38.462 0.00 0.00 41.66 2.59
7332 7925 7.255555 TTCAACAAGTGACTACATACGGAGTAA 60.256 37.037 0.00 0.00 41.03 2.24
7348 7941 6.931838 ACGGAGTAAAATGAGTGAATCTACA 58.068 36.000 0.00 0.00 41.94 2.74
7349 7942 6.812160 ACGGAGTAAAATGAGTGAATCTACAC 59.188 38.462 0.00 0.00 41.94 2.90
7387 7980 4.806330 CATACATCCGTATGTGGTAGTCC 58.194 47.826 3.56 0.00 46.70 3.85
7388 7981 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
7389 7982 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
7390 7983 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
7391 7984 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
7392 7985 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
7393 7986 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
7394 7987 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
7395 7988 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
7396 7989 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
7397 7990 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
7398 7991 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
7399 7992 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
7400 7993 5.875224 TGTGGTAGTCCATTTGAAATCTCA 58.125 37.500 0.00 0.00 46.20 3.27
7401 7994 6.303054 TGTGGTAGTCCATTTGAAATCTCAA 58.697 36.000 0.00 0.00 46.20 3.02
7427 8020 9.908152 AAAAGACAAATATTTAGAAACGGAAGG 57.092 29.630 0.00 0.00 0.00 3.46
7428 8021 8.857694 AAGACAAATATTTAGAAACGGAAGGA 57.142 30.769 0.00 0.00 0.00 3.36
7429 8022 8.494016 AGACAAATATTTAGAAACGGAAGGAG 57.506 34.615 0.00 0.00 0.00 3.69
7432 8025 9.159364 ACAAATATTTAGAAACGGAAGGAGTAC 57.841 33.333 0.00 0.00 0.00 2.73
7443 8036 5.589192 ACGGAAGGAGTACATAAATCTTCG 58.411 41.667 0.00 0.00 33.51 3.79
7444 8037 5.126707 ACGGAAGGAGTACATAAATCTTCGT 59.873 40.000 0.00 0.00 33.51 3.85
7446 8039 6.338937 GGAAGGAGTACATAAATCTTCGTGT 58.661 40.000 0.00 0.00 33.51 4.49
7498 8091 0.798159 GTGTTGATCACATGAGCGCA 59.202 50.000 11.47 0.00 45.51 6.09
7499 8092 1.399440 GTGTTGATCACATGAGCGCAT 59.601 47.619 11.47 0.00 45.51 4.73
7505 8098 0.103755 TCACATGAGCGCATCTCCTC 59.896 55.000 11.47 0.00 41.18 3.71
7521 8114 3.371097 CTCGGCATGGCGGTACTGT 62.371 63.158 36.93 0.00 0.00 3.55
7531 8124 1.202428 GGCGGTACTGTGATCCTTCTC 60.202 57.143 3.10 0.00 0.00 2.87
7542 8135 1.072015 GATCCTTCTCAGGCCATCCAG 59.928 57.143 5.01 0.00 40.58 3.86
7543 8136 0.252881 TCCTTCTCAGGCCATCCAGT 60.253 55.000 5.01 0.00 40.58 4.00
7564 8157 6.875726 CCAGTTCACTGATGAATCTTTCTACA 59.124 38.462 8.61 0.00 46.43 2.74
7593 8186 2.163010 GAGTCGACATCGGACTTTGGTA 59.837 50.000 19.50 0.00 40.29 3.25
7607 8200 3.244630 ACTTTGGTAAATGGCCTCGTGTA 60.245 43.478 3.32 0.00 0.00 2.90
7620 8213 3.188460 GCCTCGTGTATTGCTTTTCTTCA 59.812 43.478 0.00 0.00 0.00 3.02
7625 8218 4.321745 CGTGTATTGCTTTTCTTCATGCAC 59.678 41.667 0.00 0.00 35.01 4.57
7626 8219 4.321745 GTGTATTGCTTTTCTTCATGCACG 59.678 41.667 0.00 0.00 35.01 5.34
7627 8220 1.769733 TTGCTTTTCTTCATGCACGC 58.230 45.000 0.00 0.00 35.01 5.34
7628 8221 0.953727 TGCTTTTCTTCATGCACGCT 59.046 45.000 0.00 0.00 0.00 5.07
7629 8222 1.334054 GCTTTTCTTCATGCACGCTG 58.666 50.000 0.00 0.00 0.00 5.18
7630 8223 1.973138 CTTTTCTTCATGCACGCTGG 58.027 50.000 0.00 0.00 0.00 4.85
7631 8224 1.536766 CTTTTCTTCATGCACGCTGGA 59.463 47.619 0.00 0.00 0.00 3.86
7632 8225 1.825090 TTTCTTCATGCACGCTGGAT 58.175 45.000 0.00 0.00 0.00 3.41
7633 8226 2.689553 TTCTTCATGCACGCTGGATA 57.310 45.000 0.00 0.00 0.00 2.59
7634 8227 2.689553 TCTTCATGCACGCTGGATAA 57.310 45.000 0.00 0.00 0.00 1.75
7635 8228 2.554142 TCTTCATGCACGCTGGATAAG 58.446 47.619 0.00 0.00 0.00 1.73
7636 8229 1.600957 CTTCATGCACGCTGGATAAGG 59.399 52.381 0.00 0.00 0.00 2.69
7637 8230 0.541392 TCATGCACGCTGGATAAGGT 59.459 50.000 0.00 0.00 0.00 3.50
7638 8231 0.659427 CATGCACGCTGGATAAGGTG 59.341 55.000 0.00 0.00 32.96 4.00
7639 8232 0.464373 ATGCACGCTGGATAAGGTGG 60.464 55.000 0.00 0.00 31.41 4.61
7640 8233 1.819632 GCACGCTGGATAAGGTGGG 60.820 63.158 0.00 0.00 31.41 4.61
7641 8234 1.819632 CACGCTGGATAAGGTGGGC 60.820 63.158 0.00 0.00 0.00 5.36
7642 8235 1.995626 ACGCTGGATAAGGTGGGCT 60.996 57.895 0.00 0.00 0.00 5.19
7643 8236 0.689745 ACGCTGGATAAGGTGGGCTA 60.690 55.000 0.00 0.00 0.00 3.93
7644 8237 0.687354 CGCTGGATAAGGTGGGCTAT 59.313 55.000 0.00 0.00 0.00 2.97
7645 8238 1.072331 CGCTGGATAAGGTGGGCTATT 59.928 52.381 0.00 0.00 0.00 1.73
7646 8239 2.487265 CGCTGGATAAGGTGGGCTATTT 60.487 50.000 0.00 0.00 0.00 1.40
7647 8240 3.244422 CGCTGGATAAGGTGGGCTATTTA 60.244 47.826 0.00 0.00 0.00 1.40
7648 8241 4.565652 CGCTGGATAAGGTGGGCTATTTAT 60.566 45.833 0.00 0.00 0.00 1.40
7649 8242 5.338056 CGCTGGATAAGGTGGGCTATTTATA 60.338 44.000 0.00 0.00 0.00 0.98
7650 8243 6.116126 GCTGGATAAGGTGGGCTATTTATAG 58.884 44.000 0.00 0.00 0.00 1.31
7665 8258 5.559148 ATTTATAGCTGAGGTCTTCCTGG 57.441 43.478 0.00 0.00 45.24 4.45
7666 8259 1.799933 ATAGCTGAGGTCTTCCTGGG 58.200 55.000 0.00 0.00 45.24 4.45
7667 8260 0.710588 TAGCTGAGGTCTTCCTGGGA 59.289 55.000 0.00 0.00 45.24 4.37
7668 8261 0.178891 AGCTGAGGTCTTCCTGGGAA 60.179 55.000 1.90 1.90 45.24 3.97
7669 8262 0.693049 GCTGAGGTCTTCCTGGGAAA 59.307 55.000 3.55 0.00 45.24 3.13
7670 8263 1.339535 GCTGAGGTCTTCCTGGGAAAG 60.340 57.143 3.55 0.00 45.24 2.62
7671 8264 2.260822 CTGAGGTCTTCCTGGGAAAGA 58.739 52.381 3.55 0.00 45.24 2.52
7672 8265 1.978580 TGAGGTCTTCCTGGGAAAGAC 59.021 52.381 16.16 16.16 45.24 3.01
7673 8266 1.279558 GAGGTCTTCCTGGGAAAGACC 59.720 57.143 27.77 27.77 45.24 3.85
7674 8267 1.064825 GGTCTTCCTGGGAAAGACCA 58.935 55.000 29.07 0.00 43.57 4.02
7675 8268 1.636003 GGTCTTCCTGGGAAAGACCAT 59.364 52.381 29.07 0.00 43.57 3.55
7676 8269 2.041755 GGTCTTCCTGGGAAAGACCATT 59.958 50.000 29.07 0.00 43.57 3.16
7677 8270 3.500471 GGTCTTCCTGGGAAAGACCATTT 60.500 47.826 29.07 0.00 43.57 2.32
7678 8271 4.152647 GTCTTCCTGGGAAAGACCATTTT 58.847 43.478 14.35 0.00 40.36 1.82
7679 8272 4.021981 GTCTTCCTGGGAAAGACCATTTTG 60.022 45.833 14.35 0.00 40.36 2.44
7680 8273 2.888212 TCCTGGGAAAGACCATTTTGG 58.112 47.619 0.00 0.00 45.02 3.28
7681 8274 2.448961 TCCTGGGAAAGACCATTTTGGA 59.551 45.455 0.00 0.00 40.96 3.53
7682 8275 2.562738 CCTGGGAAAGACCATTTTGGAC 59.437 50.000 0.00 0.00 40.96 4.02
7683 8276 3.230134 CTGGGAAAGACCATTTTGGACA 58.770 45.455 0.00 0.00 40.96 4.02
7684 8277 3.834231 CTGGGAAAGACCATTTTGGACAT 59.166 43.478 0.00 0.00 40.96 3.06
7685 8278 3.577848 TGGGAAAGACCATTTTGGACATG 59.422 43.478 0.00 0.00 40.96 3.21
7686 8279 3.831911 GGGAAAGACCATTTTGGACATGA 59.168 43.478 0.00 0.00 40.96 3.07
7687 8280 4.321974 GGGAAAGACCATTTTGGACATGAC 60.322 45.833 0.00 0.00 40.96 3.06
7688 8281 4.321974 GGAAAGACCATTTTGGACATGACC 60.322 45.833 7.32 7.32 40.96 4.02
7689 8282 3.524095 AGACCATTTTGGACATGACCA 57.476 42.857 13.13 13.13 40.96 4.02
7690 8283 3.157087 AGACCATTTTGGACATGACCAC 58.843 45.455 16.76 3.67 40.96 4.16
7691 8284 3.157087 GACCATTTTGGACATGACCACT 58.843 45.455 16.76 2.08 40.96 4.00
7692 8285 3.157087 ACCATTTTGGACATGACCACTC 58.843 45.455 16.76 0.00 40.96 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.811017 TGATAGCAAATTTTTGGATTGGTTCTA 58.189 29.630 5.28 0.00 38.57 2.10
1 2 7.678837 TGATAGCAAATTTTTGGATTGGTTCT 58.321 30.769 5.28 0.00 38.57 3.01
24 25 6.218019 CAGGAAAAATCTTGCTGAAACATGA 58.782 36.000 0.00 0.00 39.78 3.07
45 48 2.093500 TGAAACATCTCACCGATCCAGG 60.093 50.000 0.00 0.00 37.30 4.45
66 69 2.579201 CCTGCCGACGGTCTCAAT 59.421 61.111 16.73 0.00 0.00 2.57
98 101 0.739462 CGGTGCCAGCAAATCGACTA 60.739 55.000 0.00 0.00 0.00 2.59
148 153 0.661552 CATCTCGCCAATCCAGCAAG 59.338 55.000 0.00 0.00 0.00 4.01
180 186 1.135689 AGAAAAACATGCGCCATCGTC 60.136 47.619 4.18 0.00 38.14 4.20
181 187 0.881118 AGAAAAACATGCGCCATCGT 59.119 45.000 4.18 0.00 38.14 3.73
182 188 1.261989 CAGAAAAACATGCGCCATCG 58.738 50.000 4.18 0.00 39.07 3.84
183 189 2.253603 GACAGAAAAACATGCGCCATC 58.746 47.619 4.18 0.00 0.00 3.51
184 190 1.401409 CGACAGAAAAACATGCGCCAT 60.401 47.619 4.18 0.00 0.00 4.40
185 191 0.040514 CGACAGAAAAACATGCGCCA 60.041 50.000 4.18 0.00 0.00 5.69
186 192 0.729140 CCGACAGAAAAACATGCGCC 60.729 55.000 4.18 0.00 0.00 6.53
188 194 2.679355 TTCCGACAGAAAAACATGCG 57.321 45.000 0.00 0.00 0.00 4.73
189 195 2.719046 CGTTTCCGACAGAAAAACATGC 59.281 45.455 0.00 0.00 45.93 4.06
190 196 3.296628 CCGTTTCCGACAGAAAAACATG 58.703 45.455 0.00 0.00 45.93 3.21
199 232 0.591170 AACATTGCCGTTTCCGACAG 59.409 50.000 0.00 0.00 35.63 3.51
259 293 4.162320 TGGTGTTGGTTCCAGCAAAATAAA 59.838 37.500 9.76 0.00 37.34 1.40
261 295 3.300388 TGGTGTTGGTTCCAGCAAAATA 58.700 40.909 9.76 0.00 37.34 1.40
279 314 3.619419 AGCAAAAAGGCAACAATTTGGT 58.381 36.364 0.78 0.00 44.71 3.67
292 327 2.076863 AGCGCCAGTAGTAGCAAAAAG 58.923 47.619 2.29 0.00 0.00 2.27
303 338 1.199789 CAGCAAATCAAAGCGCCAGTA 59.800 47.619 2.29 0.00 35.48 2.74
306 341 1.177895 TCCAGCAAATCAAAGCGCCA 61.178 50.000 2.29 0.00 35.48 5.69
311 346 1.669795 GCCGGTTCCAGCAAATCAAAG 60.670 52.381 1.90 0.00 0.00 2.77
370 405 9.649024 CAAACAATGAAAAATATGGTTGTTGTC 57.351 29.630 0.00 0.00 39.07 3.18
448 746 2.420628 TCCAGCAAATCAAAACGCAG 57.579 45.000 0.00 0.00 0.00 5.18
456 754 4.858850 ACATAGATGGTTCCAGCAAATCA 58.141 39.130 9.74 0.00 0.00 2.57
508 806 1.869767 CCTAGCAGAATCAATGGCGAC 59.130 52.381 0.00 0.00 0.00 5.19
543 846 2.264794 CGCCCCTCGCTAGTGTTT 59.735 61.111 2.66 0.00 34.21 2.83
564 867 2.758327 ATCGACAGTAGCCGCCCA 60.758 61.111 0.00 0.00 0.00 5.36
661 964 1.281656 CGTGGCCGGTTGTCTTTTC 59.718 57.895 1.90 0.00 0.00 2.29
676 979 4.470170 TCGTCGATCGCCACCGTG 62.470 66.667 11.09 0.00 39.67 4.94
677 980 4.471726 GTCGTCGATCGCCACCGT 62.472 66.667 11.09 0.00 39.67 4.83
735 1039 2.743928 GACAGCCCTTGCACTCCG 60.744 66.667 0.00 0.00 41.13 4.63
738 1042 2.433446 CCAGACAGCCCTTGCACT 59.567 61.111 0.00 0.00 41.13 4.40
742 1046 0.909610 TACCTCCCAGACAGCCCTTG 60.910 60.000 0.00 0.00 0.00 3.61
745 1049 2.066999 CCTACCTCCCAGACAGCCC 61.067 68.421 0.00 0.00 0.00 5.19
772 1076 2.305052 TCGTCTTCCTCTAGTCACCTCA 59.695 50.000 0.00 0.00 0.00 3.86
780 1084 0.107312 TCCCCGTCGTCTTCCTCTAG 60.107 60.000 0.00 0.00 0.00 2.43
808 1112 2.121832 TCATCCCCTCCCACGTGT 59.878 61.111 15.65 0.00 0.00 4.49
826 1130 4.033932 TCAAATCCTTATGCATGAACGACG 59.966 41.667 10.16 0.00 0.00 5.12
829 1133 4.274069 CGTCAAATCCTTATGCATGAACG 58.726 43.478 10.16 2.22 0.00 3.95
834 1138 4.776349 TGTACCGTCAAATCCTTATGCAT 58.224 39.130 3.79 3.79 0.00 3.96
837 1141 8.657074 TTTATCTGTACCGTCAAATCCTTATG 57.343 34.615 0.00 0.00 0.00 1.90
863 1168 1.745489 GCCTCAGCCGTCCGATTTT 60.745 57.895 0.00 0.00 0.00 1.82
878 1183 3.860930 ATTTTGGCCGGTCACGCCT 62.861 57.895 9.15 0.00 39.22 5.52
892 1197 0.459411 GGCGCGCATACCCAAATTTT 60.459 50.000 34.42 0.00 0.00 1.82
922 1227 9.131791 CCTGTTTTACATATAAAGTAGGGCAAT 57.868 33.333 1.95 0.00 34.59 3.56
958 1263 5.485353 AGAAGTGTGTGGATATCCTGAAAGA 59.515 40.000 22.35 0.00 34.07 2.52
986 1291 1.301401 CCGGCTCTTGGTTCGACAA 60.301 57.895 0.00 0.00 0.00 3.18
1004 1500 2.237392 ACATGGAGCTAGGGTGAGAAAC 59.763 50.000 0.00 0.00 0.00 2.78
1007 1503 1.007118 TGACATGGAGCTAGGGTGAGA 59.993 52.381 0.00 0.00 0.00 3.27
1272 1816 2.754375 GGGCTGGGAAGAACGGAA 59.246 61.111 0.00 0.00 0.00 4.30
1291 1835 3.084786 AGGAACTAACTGCAAATGGCTC 58.915 45.455 0.00 0.00 40.06 4.70
1404 1950 1.362932 AGAAGCTCCTCCTCCACCTTA 59.637 52.381 0.00 0.00 0.00 2.69
1471 2020 2.503061 CGCATCTCCCCTCACCTG 59.497 66.667 0.00 0.00 0.00 4.00
1493 2042 0.389391 CGCGAGTAATGGGGATCAGT 59.611 55.000 0.00 0.00 0.00 3.41
1543 2092 5.018809 ACATTGCAAACATACCTCTGGAAT 58.981 37.500 1.71 0.00 30.96 3.01
1558 2107 7.371159 TCACAAAATATACGGAAACATTGCAA 58.629 30.769 0.00 0.00 0.00 4.08
1603 2153 0.366871 CTCGGAACAATTCAGCGACG 59.633 55.000 0.00 0.00 0.00 5.12
1621 2171 5.127682 ACAAGAAGAAAAATGACAACAGGCT 59.872 36.000 0.00 0.00 0.00 4.58
1638 2189 8.857216 GCATCATTTTGACATTTCTACAAGAAG 58.143 33.333 0.00 0.00 35.37 2.85
2125 2679 0.685097 GAGGACTAGCACAACCACCA 59.315 55.000 0.00 0.00 0.00 4.17
2139 2693 0.620556 TCCATTGCTCCAAGGAGGAC 59.379 55.000 17.34 2.82 43.07 3.85
2193 2749 3.925299 GCGAAACAGTACTAGGAGAAACC 59.075 47.826 0.00 0.00 39.35 3.27
2212 2769 2.560504 CAGGCACAGTAATAATGGCGA 58.439 47.619 0.00 0.00 43.29 5.54
2325 2882 5.156355 GTGCCATCTTTACACAAGACAATG 58.844 41.667 0.00 0.00 34.43 2.82
2347 2904 3.076032 AGAGCTGGAATAAAACCAAGGGT 59.924 43.478 0.00 0.00 36.95 4.34
2559 3116 1.542915 CAATGTTGCCTCACCTTCAGG 59.457 52.381 0.00 0.00 42.17 3.86
2596 3153 4.290942 AGGTCACCCCTATAAGAAGACAG 58.709 47.826 0.00 0.00 43.87 3.51
2684 3242 4.307032 AATGGCATAGCATAACCCTAGG 57.693 45.455 0.00 0.06 0.00 3.02
2687 3245 3.642848 CCAAAATGGCATAGCATAACCCT 59.357 43.478 0.00 0.00 0.00 4.34
2716 3274 2.358737 GCCACCTGTCCACTTCGG 60.359 66.667 0.00 0.00 0.00 4.30
2808 3366 5.043737 TGTATGTAGAGTAAATTGCCCCC 57.956 43.478 0.00 0.00 0.00 5.40
2877 3435 2.721603 GAGCACGCTATGAAGTCATACG 59.278 50.000 15.47 15.47 38.29 3.06
2885 3443 2.741759 TCACTTGAGCACGCTATGAA 57.258 45.000 0.00 0.00 0.00 2.57
2940 3498 9.764363 TCTACCTATTAATGCACAATCTTAGTG 57.236 33.333 0.00 0.00 39.92 2.74
3125 3683 2.290071 CGAGTAATGGAGGGGTGTGTTT 60.290 50.000 0.00 0.00 0.00 2.83
3651 4209 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
3652 4210 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
3653 4211 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
3659 4217 9.485206 ACACTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 22.95 0.00 40.24 0.86
3660 4218 8.876275 ACACTAGTGTCAAAAACGTTCTTATA 57.124 30.769 22.95 0.00 40.24 0.98
3661 4219 7.781548 ACACTAGTGTCAAAAACGTTCTTAT 57.218 32.000 22.95 0.00 40.24 1.73
3662 4220 7.975616 ACTACACTAGTGTCAAAAACGTTCTTA 59.024 33.333 31.11 8.36 43.74 2.10
3663 4221 6.815142 ACTACACTAGTGTCAAAAACGTTCTT 59.185 34.615 31.11 4.99 43.74 2.52
3664 4222 6.335777 ACTACACTAGTGTCAAAAACGTTCT 58.664 36.000 31.11 5.44 43.74 3.01
3665 4223 6.579491 ACTACACTAGTGTCAAAAACGTTC 57.421 37.500 31.11 0.00 43.74 3.95
3666 4224 6.973229 AACTACACTAGTGTCAAAAACGTT 57.027 33.333 31.11 18.57 43.74 3.99
3667 4225 6.973229 AAACTACACTAGTGTCAAAAACGT 57.027 33.333 31.11 14.47 43.74 3.99
3675 4233 6.997222 ACGTTTTTGAAACTACACTAGTGTC 58.003 36.000 31.11 17.07 43.74 3.67
3676 4234 6.973229 ACGTTTTTGAAACTACACTAGTGT 57.027 33.333 30.13 30.13 46.87 3.55
3677 4235 7.681903 AGAACGTTTTTGAAACTACACTAGTG 58.318 34.615 21.44 21.44 39.39 2.74
3678 4236 7.838771 AGAACGTTTTTGAAACTACACTAGT 57.161 32.000 0.46 0.00 41.73 2.57
3690 4248 9.451002 TGTCCCATAATATAAGAACGTTTTTGA 57.549 29.630 13.87 2.81 0.00 2.69
3691 4249 9.716507 CTGTCCCATAATATAAGAACGTTTTTG 57.283 33.333 13.87 0.00 0.00 2.44
3692 4250 9.675464 TCTGTCCCATAATATAAGAACGTTTTT 57.325 29.630 9.22 9.22 0.00 1.94
3693 4251 9.326413 CTCTGTCCCATAATATAAGAACGTTTT 57.674 33.333 0.46 0.00 0.00 2.43
3694 4252 7.931948 CCTCTGTCCCATAATATAAGAACGTTT 59.068 37.037 0.46 0.00 0.00 3.60
3695 4253 7.442656 CCTCTGTCCCATAATATAAGAACGTT 58.557 38.462 0.00 0.00 0.00 3.99
3696 4254 6.014499 CCCTCTGTCCCATAATATAAGAACGT 60.014 42.308 0.00 0.00 0.00 3.99
3697 4255 6.210784 TCCCTCTGTCCCATAATATAAGAACG 59.789 42.308 0.00 0.00 0.00 3.95
3698 4256 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
3699 4257 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
3700 4258 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
3701 4259 7.896496 AGTACTCCCTCTGTCCCATAATATAAG 59.104 40.741 0.00 0.00 0.00 1.73
3702 4260 7.776745 AGTACTCCCTCTGTCCCATAATATAA 58.223 38.462 0.00 0.00 0.00 0.98
3703 4261 7.358255 AGTACTCCCTCTGTCCCATAATATA 57.642 40.000 0.00 0.00 0.00 0.86
3704 4262 6.234404 AGTACTCCCTCTGTCCCATAATAT 57.766 41.667 0.00 0.00 0.00 1.28
3705 4263 5.681494 AGTACTCCCTCTGTCCCATAATA 57.319 43.478 0.00 0.00 0.00 0.98
3706 4264 4.561254 AGTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
3707 4265 4.481280 AGTAGTACTCCCTCTGTCCCATAA 59.519 45.833 0.00 0.00 0.00 1.90
3708 4266 4.052922 AGTAGTACTCCCTCTGTCCCATA 58.947 47.826 0.00 0.00 0.00 2.74
3709 4267 2.860041 AGTAGTACTCCCTCTGTCCCAT 59.140 50.000 0.00 0.00 0.00 4.00
3710 4268 2.285707 AGTAGTACTCCCTCTGTCCCA 58.714 52.381 0.00 0.00 0.00 4.37
3711 4269 3.385314 AAGTAGTACTCCCTCTGTCCC 57.615 52.381 2.58 0.00 0.00 4.46
3712 4270 4.602107 AGAAAGTAGTACTCCCTCTGTCC 58.398 47.826 2.58 0.00 0.00 4.02
3713 4271 5.503002 AGAGAAAGTAGTACTCCCTCTGTC 58.497 45.833 23.09 9.30 36.35 3.51
3714 4272 5.523883 AGAGAAAGTAGTACTCCCTCTGT 57.476 43.478 23.09 13.57 36.35 3.41
3715 4273 7.114095 ACTAAGAGAAAGTAGTACTCCCTCTG 58.886 42.308 23.85 17.96 37.16 3.35
3716 4274 7.274772 ACTAAGAGAAAGTAGTACTCCCTCT 57.725 40.000 20.28 20.28 38.02 3.69
3717 4275 7.611079 TCAACTAAGAGAAAGTAGTACTCCCTC 59.389 40.741 17.57 17.57 30.32 4.30
3718 4276 7.394077 GTCAACTAAGAGAAAGTAGTACTCCCT 59.606 40.741 2.58 3.79 30.32 4.20
3719 4277 7.394077 AGTCAACTAAGAGAAAGTAGTACTCCC 59.606 40.741 2.58 0.00 30.32 4.30
3720 4278 8.339344 AGTCAACTAAGAGAAAGTAGTACTCC 57.661 38.462 2.58 0.00 30.32 3.85
3721 4279 9.615295 CAAGTCAACTAAGAGAAAGTAGTACTC 57.385 37.037 2.58 0.00 30.32 2.59
3722 4280 9.134055 ACAAGTCAACTAAGAGAAAGTAGTACT 57.866 33.333 0.00 0.00 30.32 2.73
3725 4283 9.352191 TCTACAAGTCAACTAAGAGAAAGTAGT 57.648 33.333 0.00 0.00 31.81 2.73
4261 4825 6.668541 ACATAGATGAACGTCAGAATTTGG 57.331 37.500 0.00 0.00 0.00 3.28
4605 5169 3.988517 GAGAAGTAACGGTCAAGTTCCTG 59.011 47.826 7.16 0.00 35.70 3.86
4991 5556 7.412346 CCAAGCGACATCAGTAAATATATCAGC 60.412 40.741 0.00 0.00 0.00 4.26
5012 5577 4.986622 AGAAGCGTGAAATTTATCCAAGC 58.013 39.130 7.79 7.79 35.95 4.01
5196 5761 3.674997 GAATGCCGGCTATAAATCCAGA 58.325 45.455 29.70 1.81 0.00 3.86
5355 5920 3.468071 TTAGTAGTCTCCCTTCTGGCA 57.532 47.619 0.00 0.00 0.00 4.92
5642 6212 3.386768 TCCTTGAATAGGCATCTACGC 57.613 47.619 0.00 0.00 44.37 4.42
5657 6227 7.029563 GTCTGTTAAGGTGCAAATTATCCTTG 58.970 38.462 12.92 0.00 40.05 3.61
5706 6276 3.118038 AGCCCAGCGATATAAAGTCCAAA 60.118 43.478 0.00 0.00 0.00 3.28
5718 6288 1.560505 AAATTTGGAAGCCCAGCGAT 58.439 45.000 0.00 0.00 44.60 4.58
5748 6318 6.503524 TCTGTTCTTTGTTAACTGGAAATGC 58.496 36.000 7.22 0.00 0.00 3.56
5797 6367 5.586243 CCCTGTGAACGATCAAATATGAGTT 59.414 40.000 0.00 0.00 39.39 3.01
5901 6471 1.938585 TGGTACCTTCTGCAGCTACT 58.061 50.000 14.36 0.00 0.00 2.57
5918 6488 3.875727 CAGCATGAGGATTAGTCTGTTGG 59.124 47.826 0.00 0.00 39.69 3.77
6001 6575 2.363306 TTTGGTGCAGAACTCATGGT 57.637 45.000 0.00 0.00 0.00 3.55
6026 6600 1.827969 GTGGTGGAGCACAGATAGAGT 59.172 52.381 4.11 0.00 35.86 3.24
6161 6735 3.051581 AGCCAATGATGAGGTAGTCCAT 58.948 45.455 0.00 0.00 35.89 3.41
6176 6750 0.816825 CTGCCGCACATAGAGCCAAT 60.817 55.000 0.00 0.00 0.00 3.16
6342 6916 2.818169 AACTGACGAGGCAGGGCAA 61.818 57.895 11.04 0.00 40.20 4.52
6359 6933 0.463654 GCACATCCGGCCTGATACAA 60.464 55.000 9.59 0.00 0.00 2.41
6466 7040 2.554032 CAGCTCACAAAACGAAAGGGAT 59.446 45.455 0.00 0.00 0.00 3.85
6624 7210 7.819644 TCAATGAAATGATACCACAAGTCTTG 58.180 34.615 11.17 11.17 0.00 3.02
6626 7212 9.334947 CTATCAATGAAATGATACCACAAGTCT 57.665 33.333 0.00 0.00 40.44 3.24
6634 7220 7.453393 TCTCCACCTATCAATGAAATGATACC 58.547 38.462 0.00 0.00 40.44 2.73
6695 7281 0.600255 GCTCTTGTGTACGTGGCTGT 60.600 55.000 0.00 0.00 0.00 4.40
6733 7319 0.519077 CCCGCTTTGTTCTCTTGCTC 59.481 55.000 0.00 0.00 0.00 4.26
6760 7346 5.047021 AGGGATTGCCTAGCTTTTTCTTTTC 60.047 40.000 0.00 0.00 0.00 2.29
6765 7351 6.461648 GGAAATAGGGATTGCCTAGCTTTTTC 60.462 42.308 14.80 14.80 37.74 2.29
6771 7357 2.796557 GGGAAATAGGGATTGCCTAGC 58.203 52.381 9.95 2.24 40.41 3.42
6772 7358 2.876079 GCGGGAAATAGGGATTGCCTAG 60.876 54.545 9.95 0.00 40.41 3.02
6773 7359 1.073284 GCGGGAAATAGGGATTGCCTA 59.927 52.381 6.38 6.38 40.41 3.93
6774 7360 0.178990 GCGGGAAATAGGGATTGCCT 60.179 55.000 1.13 1.13 40.41 4.75
6785 7371 3.832615 AAATCTACCTACGCGGGAAAT 57.167 42.857 12.47 0.00 36.97 2.17
6807 7393 2.676748 AGTGTGGGGATTGCTCAAAAA 58.323 42.857 0.00 0.00 0.00 1.94
6808 7394 2.380064 AGTGTGGGGATTGCTCAAAA 57.620 45.000 0.00 0.00 0.00 2.44
6809 7395 2.380064 AAGTGTGGGGATTGCTCAAA 57.620 45.000 0.00 0.00 0.00 2.69
6810 7396 2.380064 AAAGTGTGGGGATTGCTCAA 57.620 45.000 0.00 0.00 0.00 3.02
6811 7397 3.737559 ATAAAGTGTGGGGATTGCTCA 57.262 42.857 0.00 0.00 0.00 4.26
6812 7398 6.715347 ATTAATAAAGTGTGGGGATTGCTC 57.285 37.500 0.00 0.00 0.00 4.26
6813 7399 7.494922 AAATTAATAAAGTGTGGGGATTGCT 57.505 32.000 0.00 0.00 0.00 3.91
6814 7400 9.660180 TTTAAATTAATAAAGTGTGGGGATTGC 57.340 29.630 0.00 0.00 0.00 3.56
6816 7402 9.884636 GCTTTAAATTAATAAAGTGTGGGGATT 57.115 29.630 10.84 0.00 42.34 3.01
6817 7403 9.041354 TGCTTTAAATTAATAAAGTGTGGGGAT 57.959 29.630 10.84 0.00 42.34 3.85
6818 7404 8.423906 TGCTTTAAATTAATAAAGTGTGGGGA 57.576 30.769 10.84 0.00 42.34 4.81
6819 7405 9.495572 TTTGCTTTAAATTAATAAAGTGTGGGG 57.504 29.630 10.84 0.00 42.34 4.96
6833 7419 9.435688 GTATCCCTGTGAATTTTGCTTTAAATT 57.564 29.630 0.00 0.00 39.68 1.82
6834 7420 8.592809 TGTATCCCTGTGAATTTTGCTTTAAAT 58.407 29.630 0.00 0.00 0.00 1.40
6835 7421 7.957002 TGTATCCCTGTGAATTTTGCTTTAAA 58.043 30.769 0.00 0.00 0.00 1.52
6836 7422 7.531857 TGTATCCCTGTGAATTTTGCTTTAA 57.468 32.000 0.00 0.00 0.00 1.52
6837 7423 7.531857 TTGTATCCCTGTGAATTTTGCTTTA 57.468 32.000 0.00 0.00 0.00 1.85
6838 7424 6.418057 TTGTATCCCTGTGAATTTTGCTTT 57.582 33.333 0.00 0.00 0.00 3.51
6839 7425 6.418057 TTTGTATCCCTGTGAATTTTGCTT 57.582 33.333 0.00 0.00 0.00 3.91
6840 7426 5.047092 CCTTTGTATCCCTGTGAATTTTGCT 60.047 40.000 0.00 0.00 0.00 3.91
6841 7427 5.170748 CCTTTGTATCCCTGTGAATTTTGC 58.829 41.667 0.00 0.00 0.00 3.68
6842 7428 5.337491 CCCCTTTGTATCCCTGTGAATTTTG 60.337 44.000 0.00 0.00 0.00 2.44
6843 7429 4.777366 CCCCTTTGTATCCCTGTGAATTTT 59.223 41.667 0.00 0.00 0.00 1.82
6844 7430 4.202781 ACCCCTTTGTATCCCTGTGAATTT 60.203 41.667 0.00 0.00 0.00 1.82
6845 7431 3.336694 ACCCCTTTGTATCCCTGTGAATT 59.663 43.478 0.00 0.00 0.00 2.17
6846 7432 2.926329 ACCCCTTTGTATCCCTGTGAAT 59.074 45.455 0.00 0.00 0.00 2.57
6847 7433 2.307686 GACCCCTTTGTATCCCTGTGAA 59.692 50.000 0.00 0.00 0.00 3.18
6848 7434 1.913419 GACCCCTTTGTATCCCTGTGA 59.087 52.381 0.00 0.00 0.00 3.58
6849 7435 1.633432 TGACCCCTTTGTATCCCTGTG 59.367 52.381 0.00 0.00 0.00 3.66
6850 7436 2.053747 TGACCCCTTTGTATCCCTGT 57.946 50.000 0.00 0.00 0.00 4.00
6851 7437 2.242196 ACATGACCCCTTTGTATCCCTG 59.758 50.000 0.00 0.00 0.00 4.45
6852 7438 2.242196 CACATGACCCCTTTGTATCCCT 59.758 50.000 0.00 0.00 0.00 4.20
6853 7439 2.654863 CACATGACCCCTTTGTATCCC 58.345 52.381 0.00 0.00 0.00 3.85
6854 7440 2.241176 TCCACATGACCCCTTTGTATCC 59.759 50.000 0.00 0.00 0.00 2.59
6855 7441 3.644966 TCCACATGACCCCTTTGTATC 57.355 47.619 0.00 0.00 0.00 2.24
6856 7442 3.269381 ACATCCACATGACCCCTTTGTAT 59.731 43.478 0.00 0.00 33.72 2.29
6857 7443 2.647299 ACATCCACATGACCCCTTTGTA 59.353 45.455 0.00 0.00 33.72 2.41
6858 7444 1.428912 ACATCCACATGACCCCTTTGT 59.571 47.619 0.00 0.00 33.72 2.83
6859 7445 2.220653 ACATCCACATGACCCCTTTG 57.779 50.000 0.00 0.00 33.72 2.77
6860 7446 3.189606 TCTACATCCACATGACCCCTTT 58.810 45.455 0.00 0.00 33.72 3.11
6861 7447 2.845659 TCTACATCCACATGACCCCTT 58.154 47.619 0.00 0.00 33.72 3.95
6862 7448 2.568546 TCTACATCCACATGACCCCT 57.431 50.000 0.00 0.00 33.72 4.79
6887 7473 0.543410 TTCCTCAGGGTCGCCACTTA 60.543 55.000 0.00 0.00 0.00 2.24
6893 7479 0.889186 TTTTGCTTCCTCAGGGTCGC 60.889 55.000 0.00 0.00 0.00 5.19
6901 7487 8.419076 TGTAAAATTTTCTGTTTTGCTTCCTC 57.581 30.769 6.72 0.00 33.91 3.71
6902 7488 8.785329 TTGTAAAATTTTCTGTTTTGCTTCCT 57.215 26.923 6.72 0.00 33.91 3.36
6948 7541 5.461032 ACGATTTTATGTTCAAAGGCCAA 57.539 34.783 5.01 0.00 0.00 4.52
6956 7549 9.601971 GTTTTGTTAGCTACGATTTTATGTTCA 57.398 29.630 0.00 0.00 0.00 3.18
7010 7603 3.259374 AGGAGGTCCGCATATGACAATAG 59.741 47.826 6.97 0.00 42.08 1.73
7017 7610 1.002087 GGGTTAGGAGGTCCGCATATG 59.998 57.143 0.00 0.00 42.08 1.78
7044 7637 2.997303 CAAACCGATTGTGGACGACATA 59.003 45.455 0.00 0.00 33.40 2.29
7056 7649 1.201987 GCGTGCGATTACAAACCGATT 60.202 47.619 0.00 0.00 0.00 3.34
7066 7659 0.458716 TCGGTGATTGCGTGCGATTA 60.459 50.000 0.00 0.00 0.00 1.75
7074 7667 1.358877 TGAGTCATTCGGTGATTGCG 58.641 50.000 0.00 0.00 39.48 4.85
7084 7677 6.919662 TGCTTGATTTGTCTTTTGAGTCATTC 59.080 34.615 0.00 0.00 0.00 2.67
7095 7688 3.190118 GCACTAGCTGCTTGATTTGTCTT 59.810 43.478 17.66 0.00 43.33 3.01
7096 7689 2.746362 GCACTAGCTGCTTGATTTGTCT 59.254 45.455 17.66 0.00 43.33 3.41
7097 7690 2.159462 GGCACTAGCTGCTTGATTTGTC 60.159 50.000 17.66 3.79 46.25 3.18
7098 7691 1.815003 GGCACTAGCTGCTTGATTTGT 59.185 47.619 17.66 0.98 46.25 2.83
7099 7692 1.814394 TGGCACTAGCTGCTTGATTTG 59.186 47.619 17.66 6.93 46.25 2.32
7102 7695 1.681166 CCTTGGCACTAGCTGCTTGAT 60.681 52.381 17.66 0.00 46.25 2.57
7103 7696 0.321919 CCTTGGCACTAGCTGCTTGA 60.322 55.000 17.66 0.00 46.25 3.02
7104 7697 0.607489 ACCTTGGCACTAGCTGCTTG 60.607 55.000 7.79 8.80 46.25 4.01
7105 7698 0.322008 GACCTTGGCACTAGCTGCTT 60.322 55.000 7.79 0.00 46.25 3.91
7123 7716 3.198417 TGAAGCCTTAGCATGTCATGAGA 59.802 43.478 17.24 0.00 43.56 3.27
7130 7723 1.005215 AGCCTTGAAGCCTTAGCATGT 59.995 47.619 0.00 0.00 43.56 3.21
7138 7731 1.605738 CCAGCAAGCCTTGAAGCCT 60.606 57.895 9.04 0.00 0.00 4.58
7148 7741 3.314635 CCAGAGTGAATAATCCAGCAAGC 59.685 47.826 0.00 0.00 0.00 4.01
7168 7761 1.134367 CTTCAGCGATCGTTCTACCCA 59.866 52.381 17.81 0.00 0.00 4.51
7169 7762 1.404391 TCTTCAGCGATCGTTCTACCC 59.596 52.381 17.81 0.00 0.00 3.69
7202 7795 3.311871 CAGTGTGCAGAGATGAATAAGGC 59.688 47.826 0.00 0.00 0.00 4.35
7256 7849 3.496337 CGGAGGTAGTAGATGGCAGACTA 60.496 52.174 0.00 0.00 0.00 2.59
7261 7854 2.029623 GAACGGAGGTAGTAGATGGCA 58.970 52.381 0.00 0.00 0.00 4.92
7262 7855 1.340568 GGAACGGAGGTAGTAGATGGC 59.659 57.143 0.00 0.00 0.00 4.40
7268 7861 8.310122 ACAATTATTTAGGAACGGAGGTAGTA 57.690 34.615 0.00 0.00 0.00 1.82
7269 7862 7.125356 AGACAATTATTTAGGAACGGAGGTAGT 59.875 37.037 0.00 0.00 0.00 2.73
7270 7863 7.498443 AGACAATTATTTAGGAACGGAGGTAG 58.502 38.462 0.00 0.00 0.00 3.18
7271 7864 7.427989 AGACAATTATTTAGGAACGGAGGTA 57.572 36.000 0.00 0.00 0.00 3.08
7272 7865 6.309389 AGACAATTATTTAGGAACGGAGGT 57.691 37.500 0.00 0.00 0.00 3.85
7273 7866 7.553044 AGAAAGACAATTATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
7274 7867 8.494016 AGAAAGACAATTATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
7275 7868 9.595823 CTAGAAAGACAATTATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
7276 7869 9.595823 TCTAGAAAGACAATTATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
7289 7882 9.566432 ACTTGTTGAAATCTCTAGAAAGACAAT 57.434 29.630 0.00 0.00 0.00 2.71
7290 7883 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
7291 7884 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
7292 7885 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
7293 7886 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
7294 7887 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
7295 7888 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
7296 7889 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
7297 7890 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
7298 7891 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
7299 7892 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
7300 7893 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
7301 7894 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
7302 7895 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
7303 7896 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
7304 7897 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
7305 7898 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
7306 7899 5.010314 ACTCCGTATGTAGTCACTTGTTGAA 59.990 40.000 0.00 0.00 35.39 2.69
7307 7900 4.521639 ACTCCGTATGTAGTCACTTGTTGA 59.478 41.667 0.00 0.00 0.00 3.18
7308 7901 4.806330 ACTCCGTATGTAGTCACTTGTTG 58.194 43.478 0.00 0.00 0.00 3.33
7309 7902 6.579666 TTACTCCGTATGTAGTCACTTGTT 57.420 37.500 0.00 0.00 0.00 2.83
7310 7903 6.579666 TTTACTCCGTATGTAGTCACTTGT 57.420 37.500 0.00 0.00 0.00 3.16
7311 7904 7.758076 TCATTTTACTCCGTATGTAGTCACTTG 59.242 37.037 0.00 0.00 0.00 3.16
7312 7905 7.833786 TCATTTTACTCCGTATGTAGTCACTT 58.166 34.615 0.00 0.00 0.00 3.16
7313 7906 7.122353 ACTCATTTTACTCCGTATGTAGTCACT 59.878 37.037 0.00 0.00 0.00 3.41
7314 7907 7.220300 CACTCATTTTACTCCGTATGTAGTCAC 59.780 40.741 0.00 0.00 0.00 3.67
7315 7908 7.121611 TCACTCATTTTACTCCGTATGTAGTCA 59.878 37.037 0.00 0.00 0.00 3.41
7316 7909 7.478322 TCACTCATTTTACTCCGTATGTAGTC 58.522 38.462 0.00 0.00 0.00 2.59
7317 7910 7.400599 TCACTCATTTTACTCCGTATGTAGT 57.599 36.000 0.00 0.00 0.00 2.73
7318 7911 8.873215 ATTCACTCATTTTACTCCGTATGTAG 57.127 34.615 0.00 0.00 0.00 2.74
7319 7912 8.692710 AGATTCACTCATTTTACTCCGTATGTA 58.307 33.333 0.00 0.00 0.00 2.29
7320 7913 7.556844 AGATTCACTCATTTTACTCCGTATGT 58.443 34.615 0.00 0.00 0.00 2.29
7321 7914 8.969267 GTAGATTCACTCATTTTACTCCGTATG 58.031 37.037 0.00 0.00 0.00 2.39
7322 7915 8.692710 TGTAGATTCACTCATTTTACTCCGTAT 58.307 33.333 0.00 0.00 0.00 3.06
7323 7916 7.972277 GTGTAGATTCACTCATTTTACTCCGTA 59.028 37.037 0.00 0.00 35.68 4.02
7324 7917 6.812160 GTGTAGATTCACTCATTTTACTCCGT 59.188 38.462 0.00 0.00 35.68 4.69
7325 7918 7.036220 AGTGTAGATTCACTCATTTTACTCCG 58.964 38.462 0.00 0.00 44.07 4.63
7366 7959 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
7367 7960 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
7375 7968 8.106462 TTGAGATTTCAAATGGACTACCACATA 58.894 33.333 0.00 0.00 42.50 2.29
7376 7969 6.947733 TTGAGATTTCAAATGGACTACCACAT 59.052 34.615 0.00 0.00 42.50 3.21
7377 7970 6.303054 TTGAGATTTCAAATGGACTACCACA 58.697 36.000 0.00 0.00 42.50 4.17
7378 7971 6.817765 TTGAGATTTCAAATGGACTACCAC 57.182 37.500 0.00 0.00 42.50 4.16
7401 7994 9.908152 CCTTCCGTTTCTAAATATTTGTCTTTT 57.092 29.630 11.05 0.00 0.00 2.27
7402 7995 9.292195 TCCTTCCGTTTCTAAATATTTGTCTTT 57.708 29.630 11.05 0.00 0.00 2.52
7403 7996 8.857694 TCCTTCCGTTTCTAAATATTTGTCTT 57.142 30.769 11.05 0.00 0.00 3.01
7404 7997 8.101419 ACTCCTTCCGTTTCTAAATATTTGTCT 58.899 33.333 11.05 0.00 0.00 3.41
7405 7998 8.265165 ACTCCTTCCGTTTCTAAATATTTGTC 57.735 34.615 11.05 0.00 0.00 3.18
7406 7999 9.159364 GTACTCCTTCCGTTTCTAAATATTTGT 57.841 33.333 11.05 0.00 0.00 2.83
7407 8000 9.158233 TGTACTCCTTCCGTTTCTAAATATTTG 57.842 33.333 11.05 1.65 0.00 2.32
7408 8001 9.901172 ATGTACTCCTTCCGTTTCTAAATATTT 57.099 29.630 5.89 5.89 0.00 1.40
7412 8005 9.901172 ATTTATGTACTCCTTCCGTTTCTAAAT 57.099 29.630 0.00 0.00 0.00 1.40
7413 8006 9.374838 GATTTATGTACTCCTTCCGTTTCTAAA 57.625 33.333 0.00 0.00 0.00 1.85
7414 8007 8.755977 AGATTTATGTACTCCTTCCGTTTCTAA 58.244 33.333 0.00 0.00 0.00 2.10
7415 8008 8.302515 AGATTTATGTACTCCTTCCGTTTCTA 57.697 34.615 0.00 0.00 0.00 2.10
7416 8009 7.184067 AGATTTATGTACTCCTTCCGTTTCT 57.816 36.000 0.00 0.00 0.00 2.52
7417 8010 7.254017 CGAAGATTTATGTACTCCTTCCGTTTC 60.254 40.741 0.00 0.00 0.00 2.78
7418 8011 6.534079 CGAAGATTTATGTACTCCTTCCGTTT 59.466 38.462 0.00 0.00 0.00 3.60
7419 8012 6.040878 CGAAGATTTATGTACTCCTTCCGTT 58.959 40.000 0.00 0.00 0.00 4.44
7420 8013 5.126707 ACGAAGATTTATGTACTCCTTCCGT 59.873 40.000 0.00 0.00 0.00 4.69
7421 8014 5.459107 CACGAAGATTTATGTACTCCTTCCG 59.541 44.000 0.00 0.00 0.00 4.30
7422 8015 6.255887 CACACGAAGATTTATGTACTCCTTCC 59.744 42.308 0.00 0.00 0.00 3.46
7423 8016 6.255887 CCACACGAAGATTTATGTACTCCTTC 59.744 42.308 0.00 0.00 0.00 3.46
7424 8017 6.106673 CCACACGAAGATTTATGTACTCCTT 58.893 40.000 0.00 0.00 0.00 3.36
7425 8018 5.661458 CCACACGAAGATTTATGTACTCCT 58.339 41.667 0.00 0.00 0.00 3.69
7426 8019 4.270325 GCCACACGAAGATTTATGTACTCC 59.730 45.833 0.00 0.00 0.00 3.85
7427 8020 4.270325 GGCCACACGAAGATTTATGTACTC 59.730 45.833 0.00 0.00 0.00 2.59
7428 8021 4.189231 GGCCACACGAAGATTTATGTACT 58.811 43.478 0.00 0.00 0.00 2.73
7429 8022 3.936453 TGGCCACACGAAGATTTATGTAC 59.064 43.478 0.00 0.00 0.00 2.90
7432 8025 4.096231 TGAATGGCCACACGAAGATTTATG 59.904 41.667 8.16 0.00 0.00 1.90
7443 8036 0.393537 CCTCCTCTGAATGGCCACAC 60.394 60.000 8.16 5.69 0.00 3.82
7444 8037 1.993653 CCTCCTCTGAATGGCCACA 59.006 57.895 8.16 0.36 0.00 4.17
7446 8039 1.210204 AAGCCTCCTCTGAATGGCCA 61.210 55.000 8.56 8.56 45.94 5.36
7479 8072 6.529051 GAGATGCGCTCATGTGATCAACAC 62.529 50.000 9.73 0.00 44.77 3.32
7495 8088 2.664185 CCATGCCGAGGAGATGCG 60.664 66.667 0.00 0.00 0.00 4.73
7498 8091 3.933722 CCGCCATGCCGAGGAGAT 61.934 66.667 0.00 0.00 0.00 2.75
7505 8098 2.923426 ATCACAGTACCGCCATGCCG 62.923 60.000 0.00 0.00 0.00 5.69
7521 8114 1.135094 GGATGGCCTGAGAAGGATCA 58.865 55.000 3.32 0.00 0.00 2.92
7531 8124 0.325933 TCAGTGAACTGGATGGCCTG 59.674 55.000 3.32 0.00 43.91 4.85
7542 8135 8.993121 TCTTTGTAGAAAGATTCATCAGTGAAC 58.007 33.333 10.82 0.00 42.23 3.18
7543 8136 9.212641 CTCTTTGTAGAAAGATTCATCAGTGAA 57.787 33.333 14.81 0.00 45.25 3.18
7564 8157 1.202582 CCGATGTCGACTCACCTCTTT 59.797 52.381 17.92 0.00 43.02 2.52
7593 8186 2.128771 AGCAATACACGAGGCCATTT 57.871 45.000 5.01 0.00 0.00 2.32
7607 8200 2.029649 AGCGTGCATGAAGAAAAGCAAT 60.030 40.909 10.93 0.00 38.91 3.56
7620 8213 0.464373 CCACCTTATCCAGCGTGCAT 60.464 55.000 0.00 0.00 0.00 3.96
7625 8218 0.687354 ATAGCCCACCTTATCCAGCG 59.313 55.000 0.00 0.00 0.00 5.18
7626 8219 2.959465 AATAGCCCACCTTATCCAGC 57.041 50.000 0.00 0.00 0.00 4.85
7641 8234 6.295575 CCCAGGAAGACCTCAGCTATAAATAG 60.296 46.154 0.00 0.00 45.94 1.73
7642 8235 5.544176 CCCAGGAAGACCTCAGCTATAAATA 59.456 44.000 0.00 0.00 45.94 1.40
7643 8236 4.349342 CCCAGGAAGACCTCAGCTATAAAT 59.651 45.833 0.00 0.00 45.94 1.40
7644 8237 3.711704 CCCAGGAAGACCTCAGCTATAAA 59.288 47.826 0.00 0.00 45.94 1.40
7645 8238 3.052109 TCCCAGGAAGACCTCAGCTATAA 60.052 47.826 0.00 0.00 45.94 0.98
7646 8239 2.518407 TCCCAGGAAGACCTCAGCTATA 59.482 50.000 0.00 0.00 45.94 1.31
7647 8240 1.292242 TCCCAGGAAGACCTCAGCTAT 59.708 52.381 0.00 0.00 45.94 2.97
7648 8241 0.710588 TCCCAGGAAGACCTCAGCTA 59.289 55.000 0.00 0.00 45.94 3.32
7649 8242 0.178891 TTCCCAGGAAGACCTCAGCT 60.179 55.000 0.00 0.00 45.94 4.24
7650 8243 0.693049 TTTCCCAGGAAGACCTCAGC 59.307 55.000 0.00 0.00 45.94 4.26
7651 8244 2.027653 GTCTTTCCCAGGAAGACCTCAG 60.028 54.545 9.15 3.54 45.94 3.35
7652 8245 1.978580 GTCTTTCCCAGGAAGACCTCA 59.021 52.381 9.15 0.00 45.94 3.86
7653 8246 1.279558 GGTCTTTCCCAGGAAGACCTC 59.720 57.143 24.27 7.02 45.94 3.85
7655 8248 1.064825 TGGTCTTTCCCAGGAAGACC 58.935 55.000 24.60 24.60 43.91 3.85
7656 8249 3.441500 AATGGTCTTTCCCAGGAAGAC 57.558 47.619 11.22 11.22 38.07 3.01
7657 8250 4.151883 CAAAATGGTCTTTCCCAGGAAGA 58.848 43.478 0.00 0.00 38.07 2.87
7658 8251 3.259123 CCAAAATGGTCTTTCCCAGGAAG 59.741 47.826 0.00 0.00 38.07 3.46
7659 8252 3.116939 TCCAAAATGGTCTTTCCCAGGAA 60.117 43.478 0.00 0.00 39.03 3.36
7660 8253 2.448961 TCCAAAATGGTCTTTCCCAGGA 59.551 45.455 0.00 0.00 39.03 3.86
7661 8254 2.562738 GTCCAAAATGGTCTTTCCCAGG 59.437 50.000 0.00 0.00 39.03 4.45
7662 8255 3.230134 TGTCCAAAATGGTCTTTCCCAG 58.770 45.455 0.00 0.00 39.03 4.45
7663 8256 3.320610 TGTCCAAAATGGTCTTTCCCA 57.679 42.857 0.00 0.00 39.03 4.37
7664 8257 3.831911 TCATGTCCAAAATGGTCTTTCCC 59.168 43.478 0.00 0.00 39.03 3.97
7665 8258 4.321974 GGTCATGTCCAAAATGGTCTTTCC 60.322 45.833 3.91 0.00 39.03 3.13
7666 8259 4.280677 TGGTCATGTCCAAAATGGTCTTTC 59.719 41.667 9.39 0.00 39.03 2.62
7667 8260 4.039124 GTGGTCATGTCCAAAATGGTCTTT 59.961 41.667 13.50 0.00 39.03 2.52
7668 8261 3.573967 GTGGTCATGTCCAAAATGGTCTT 59.426 43.478 13.50 0.00 39.03 3.01
7669 8262 3.157087 GTGGTCATGTCCAAAATGGTCT 58.843 45.455 13.50 0.00 39.03 3.85
7670 8263 3.157087 AGTGGTCATGTCCAAAATGGTC 58.843 45.455 13.50 0.00 39.03 4.02
7671 8264 3.157087 GAGTGGTCATGTCCAAAATGGT 58.843 45.455 13.50 0.00 39.03 3.55
7672 8265 3.855689 GAGTGGTCATGTCCAAAATGG 57.144 47.619 13.50 0.00 39.34 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.