Multiple sequence alignment - TraesCS7B01G047000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G047000 chr7B 100.000 3835 0 0 1 3835 45847044 45850878 0.000000e+00 7083.0
1 TraesCS7B01G047000 chr7B 95.875 2085 73 8 782 2854 45642321 45640238 0.000000e+00 3362.0
2 TraesCS7B01G047000 chr7B 89.431 615 58 6 3226 3835 45638603 45637991 0.000000e+00 769.0
3 TraesCS7B01G047000 chr7B 87.989 358 25 10 341 691 45643843 45643497 1.280000e-109 407.0
4 TraesCS7B01G047000 chr7B 76.570 589 115 20 2223 2795 120588778 120589359 6.230000e-78 302.0
5 TraesCS7B01G047000 chr7B 83.658 257 28 5 781 1024 45650865 45650610 2.980000e-56 230.0
6 TraesCS7B01G047000 chr7B 80.816 245 29 11 363 594 45642602 45642363 3.940000e-40 176.0
7 TraesCS7B01G047000 chr7B 83.333 102 7 2 2943 3044 45640211 45640120 6.830000e-13 86.1
8 TraesCS7B01G047000 chr7D 94.036 2230 89 17 775 3000 93034137 93031948 0.000000e+00 3341.0
9 TraesCS7B01G047000 chr7D 91.628 430 22 7 341 764 93034888 93034467 1.990000e-162 582.0
10 TraesCS7B01G047000 chr7D 85.882 255 36 0 1747 2001 159738127 159738381 4.880000e-69 272.0
11 TraesCS7B01G047000 chr7D 86.124 209 26 3 781 989 93037189 93036984 4.990000e-54 222.0
12 TraesCS7B01G047000 chr7D 88.811 143 14 2 2860 3000 93031637 93031495 1.420000e-39 174.0
13 TraesCS7B01G047000 chr7D 95.890 73 3 0 2782 2854 93031741 93031669 6.730000e-23 119.0
14 TraesCS7B01G047000 chr7A 93.774 2120 93 18 885 3000 95237965 95235881 0.000000e+00 3147.0
15 TraesCS7B01G047000 chr7A 94.121 1956 78 16 1049 3000 95230628 95228706 0.000000e+00 2940.0
16 TraesCS7B01G047000 chr7A 89.892 2305 147 35 797 3044 96052129 96049854 0.000000e+00 2887.0
17 TraesCS7B01G047000 chr7A 92.237 438 18 7 341 771 95256449 95256021 1.180000e-169 606.0
18 TraesCS7B01G047000 chr7A 91.414 396 27 4 376 771 95245478 95245090 1.570000e-148 536.0
19 TraesCS7B01G047000 chr7A 89.078 293 29 2 773 1063 95255762 95255471 1.010000e-95 361.0
20 TraesCS7B01G047000 chr7A 90.278 216 21 0 341 556 95238945 95238730 2.260000e-72 283.0
21 TraesCS7B01G047000 chr7A 86.275 255 35 0 1747 2001 158396741 158396995 1.050000e-70 278.0
22 TraesCS7B01G047000 chr7A 75.478 628 121 28 2192 2795 158397000 158397618 3.770000e-70 276.0
23 TraesCS7B01G047000 chr7A 87.317 205 26 0 1446 1650 158395917 158396121 6.410000e-58 235.0
24 TraesCS7B01G047000 chr7A 85.646 209 27 3 781 989 95258145 95257940 2.320000e-52 217.0
25 TraesCS7B01G047000 chr7A 85.167 209 28 3 781 989 95254057 95253852 1.080000e-50 211.0
26 TraesCS7B01G047000 chr7A 86.364 132 6 8 641 760 95238572 95238441 2.400000e-27 134.0
27 TraesCS7B01G047000 chr7A 94.915 59 2 1 584 642 95238733 95238676 1.470000e-14 91.6
28 TraesCS7B01G047000 chrUn 94.172 1956 77 16 1049 3000 82676573 82678495 0.000000e+00 2946.0
29 TraesCS7B01G047000 chrUn 90.610 213 20 0 341 553 82693021 82693233 2.260000e-72 283.0
30 TraesCS7B01G047000 chrUn 86.364 132 6 8 641 760 82693394 82693525 2.400000e-27 134.0
31 TraesCS7B01G047000 chrUn 94.915 59 2 1 584 642 82693233 82693290 1.470000e-14 91.6
32 TraesCS7B01G047000 chr5A 89.908 654 32 11 1762 2385 659356987 659356338 0.000000e+00 811.0
33 TraesCS7B01G047000 chr5A 86.527 334 39 5 1119 1449 410203600 410203270 2.820000e-96 363.0
34 TraesCS7B01G047000 chr3B 97.337 338 8 1 1 337 707950947 707951284 1.200000e-159 573.0
35 TraesCS7B01G047000 chr3B 87.952 415 45 5 3228 3637 187513681 187514095 5.760000e-133 484.0
36 TraesCS7B01G047000 chr3A 90.000 410 37 4 3230 3635 143141931 143142340 9.440000e-146 527.0
37 TraesCS7B01G047000 chr3A 90.774 336 29 2 1 336 746104297 746104630 7.560000e-122 448.0
38 TraesCS7B01G047000 chr3A 73.861 417 95 12 3225 3632 605860383 605859972 1.840000e-33 154.0
39 TraesCS7B01G047000 chr3D 88.702 416 42 5 3226 3637 131007745 131008159 1.590000e-138 503.0
40 TraesCS7B01G047000 chr4B 91.765 340 21 4 1 335 66869762 66869425 2.090000e-127 466.0
41 TraesCS7B01G047000 chr4B 94.098 305 18 0 1 305 66929962 66929658 7.500000e-127 464.0
42 TraesCS7B01G047000 chr4B 91.797 256 21 0 1 256 67001461 67001206 1.310000e-94 357.0
43 TraesCS7B01G047000 chr4B 84.127 252 25 6 3377 3625 53452154 53451915 2.980000e-56 230.0
44 TraesCS7B01G047000 chr4B 86.127 173 19 5 3457 3625 53477107 53476936 8.460000e-42 182.0
45 TraesCS7B01G047000 chr2B 90.397 302 28 1 1 302 17210703 17210403 2.780000e-106 396.0
46 TraesCS7B01G047000 chr5B 85.629 334 42 5 1119 1449 363669761 363669431 2.840000e-91 346.0
47 TraesCS7B01G047000 chr1B 72.569 401 101 8 3228 3621 26328824 26328426 5.200000e-24 122.0
48 TraesCS7B01G047000 chr2D 79.856 139 19 8 209 339 309106880 309106743 4.080000e-15 93.5
49 TraesCS7B01G047000 chr5D 85.000 60 6 2 281 337 539745297 539745238 1.490000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G047000 chr7B 45847044 45850878 3834 False 7083.00 7083 100.000000 1 3835 1 chr7B.!!$F1 3834
1 TraesCS7B01G047000 chr7B 45637991 45643843 5852 True 960.02 3362 87.488800 341 3835 5 chr7B.!!$R2 3494
2 TraesCS7B01G047000 chr7B 120588778 120589359 581 False 302.00 302 76.570000 2223 2795 1 chr7B.!!$F2 572
3 TraesCS7B01G047000 chr7D 93031495 93037189 5694 True 887.60 3341 91.297800 341 3000 5 chr7D.!!$R1 2659
4 TraesCS7B01G047000 chr7A 95228706 95230628 1922 True 2940.00 2940 94.121000 1049 3000 1 chr7A.!!$R1 1951
5 TraesCS7B01G047000 chr7A 96049854 96052129 2275 True 2887.00 2887 89.892000 797 3044 1 chr7A.!!$R3 2247
6 TraesCS7B01G047000 chr7A 95235881 95238945 3064 True 913.90 3147 91.332750 341 3000 4 chr7A.!!$R4 2659
7 TraesCS7B01G047000 chr7A 95253852 95258145 4293 True 348.75 606 88.032000 341 1063 4 chr7A.!!$R5 722
8 TraesCS7B01G047000 chr7A 158395917 158397618 1701 False 263.00 278 83.023333 1446 2795 3 chr7A.!!$F1 1349
9 TraesCS7B01G047000 chrUn 82676573 82678495 1922 False 2946.00 2946 94.172000 1049 3000 1 chrUn.!!$F1 1951
10 TraesCS7B01G047000 chr5A 659356338 659356987 649 True 811.00 811 89.908000 1762 2385 1 chr5A.!!$R2 623

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
231 232 0.180171 TAATCCATGCCGGTCTGTGG 59.820 55.0 1.90 6.77 35.57 4.17 F
247 248 0.253327 GTGGCGGGATTTCTTCTCCT 59.747 55.0 0.00 0.00 33.05 3.69 F
906 4765 0.326618 AGATGGTCAACCGGGGAGAT 60.327 55.0 6.32 0.00 39.43 2.75 F
2504 7671 0.456221 CGCAGACCGACTATGTCCTT 59.544 55.0 0.00 0.00 40.02 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1108 4977 0.685097 TGGAGCGCCTTCTTGTAGTT 59.315 50.0 8.34 0.00 34.31 2.24 R
1266 5135 1.155424 GGCCGAACTTGACGTTGTCA 61.155 55.0 0.00 0.00 41.09 3.58 R
2812 7979 0.881118 GCTTTTCTTCGTGATGGCCA 59.119 50.0 8.56 8.56 0.00 5.36 R
3455 10405 0.415429 AAGGGCTCCTGGAAGAGAGA 59.585 55.0 0.00 0.00 34.45 3.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.807538 GCTGTGGAGCACGCCATG 61.808 66.667 0.00 0.00 45.46 3.66
34 35 2.358615 TGTGGAGCACGCCATGTC 60.359 61.111 0.00 0.00 40.68 3.06
38 39 3.127533 GAGCACGCCATGTCACCC 61.128 66.667 0.00 0.00 0.00 4.61
41 42 3.055719 CACGCCATGTCACCCCAC 61.056 66.667 0.00 0.00 0.00 4.61
42 43 4.344865 ACGCCATGTCACCCCACC 62.345 66.667 0.00 0.00 0.00 4.61
46 47 1.607612 CCATGTCACCCCACCCTAC 59.392 63.158 0.00 0.00 0.00 3.18
47 48 1.607612 CATGTCACCCCACCCTACC 59.392 63.158 0.00 0.00 0.00 3.18
48 49 1.993391 ATGTCACCCCACCCTACCG 60.993 63.158 0.00 0.00 0.00 4.02
49 50 4.091939 GTCACCCCACCCTACCGC 62.092 72.222 0.00 0.00 0.00 5.68
50 51 4.642488 TCACCCCACCCTACCGCA 62.642 66.667 0.00 0.00 0.00 5.69
51 52 4.096003 CACCCCACCCTACCGCAG 62.096 72.222 0.00 0.00 0.00 5.18
52 53 4.651516 ACCCCACCCTACCGCAGT 62.652 66.667 0.00 0.00 0.00 4.40
53 54 3.782443 CCCCACCCTACCGCAGTC 61.782 72.222 0.00 0.00 0.00 3.51
55 56 4.143333 CCACCCTACCGCAGTCCG 62.143 72.222 0.00 0.00 0.00 4.79
57 58 3.379445 ACCCTACCGCAGTCCGTG 61.379 66.667 0.00 0.00 34.38 4.94
58 59 3.379445 CCCTACCGCAGTCCGTGT 61.379 66.667 0.00 0.00 34.38 4.49
59 60 2.126071 CCTACCGCAGTCCGTGTG 60.126 66.667 0.00 0.00 36.32 3.82
65 66 2.672996 GCAGTCCGTGTGGCCATT 60.673 61.111 9.72 0.00 34.14 3.16
66 67 2.690778 GCAGTCCGTGTGGCCATTC 61.691 63.158 9.72 4.14 34.14 2.67
67 68 1.302431 CAGTCCGTGTGGCCATTCA 60.302 57.895 9.72 0.00 34.14 2.57
68 69 0.677731 CAGTCCGTGTGGCCATTCAT 60.678 55.000 9.72 0.00 34.14 2.57
69 70 0.392998 AGTCCGTGTGGCCATTCATC 60.393 55.000 9.72 0.00 34.14 2.92
71 72 1.077501 CCGTGTGGCCATTCATCCT 60.078 57.895 9.72 0.00 0.00 3.24
72 73 0.680921 CCGTGTGGCCATTCATCCTT 60.681 55.000 9.72 0.00 0.00 3.36
73 74 0.734889 CGTGTGGCCATTCATCCTTC 59.265 55.000 9.72 0.00 0.00 3.46
74 75 1.679944 CGTGTGGCCATTCATCCTTCT 60.680 52.381 9.72 0.00 0.00 2.85
75 76 1.747355 GTGTGGCCATTCATCCTTCTG 59.253 52.381 9.72 0.00 0.00 3.02
77 78 0.627451 TGGCCATTCATCCTTCTGCT 59.373 50.000 0.00 0.00 0.00 4.24
78 79 1.006281 TGGCCATTCATCCTTCTGCTT 59.994 47.619 0.00 0.00 0.00 3.91
81 82 3.434167 GGCCATTCATCCTTCTGCTTCTA 60.434 47.826 0.00 0.00 0.00 2.10
82 83 3.563390 GCCATTCATCCTTCTGCTTCTAC 59.437 47.826 0.00 0.00 0.00 2.59
84 85 5.055812 CCATTCATCCTTCTGCTTCTACTC 58.944 45.833 0.00 0.00 0.00 2.59
86 87 4.998671 TCATCCTTCTGCTTCTACTCTG 57.001 45.455 0.00 0.00 0.00 3.35
87 88 3.703556 TCATCCTTCTGCTTCTACTCTGG 59.296 47.826 0.00 0.00 0.00 3.86
88 89 3.458044 TCCTTCTGCTTCTACTCTGGA 57.542 47.619 0.00 0.00 0.00 3.86
91 92 4.593206 TCCTTCTGCTTCTACTCTGGAAAA 59.407 41.667 0.00 0.00 0.00 2.29
92 93 5.249393 TCCTTCTGCTTCTACTCTGGAAAAT 59.751 40.000 0.00 0.00 0.00 1.82
94 95 6.432472 CCTTCTGCTTCTACTCTGGAAAATTT 59.568 38.462 0.00 0.00 0.00 1.82
98 99 5.010282 GCTTCTACTCTGGAAAATTTGGGA 58.990 41.667 0.00 0.00 0.00 4.37
100 101 6.405176 GCTTCTACTCTGGAAAATTTGGGATG 60.405 42.308 0.00 0.00 0.00 3.51
101 102 4.949856 TCTACTCTGGAAAATTTGGGATGC 59.050 41.667 0.00 0.00 0.00 3.91
103 104 3.903090 ACTCTGGAAAATTTGGGATGCAA 59.097 39.130 0.00 0.00 0.00 4.08
104 105 4.020839 ACTCTGGAAAATTTGGGATGCAAG 60.021 41.667 0.00 0.00 0.00 4.01
105 106 3.261390 TCTGGAAAATTTGGGATGCAAGG 59.739 43.478 0.00 0.00 0.00 3.61
109 110 4.637091 GGAAAATTTGGGATGCAAGGAATG 59.363 41.667 0.00 0.00 0.00 2.67
136 137 3.518992 CCTTCAGAGGGGTTAACCAAA 57.481 47.619 25.71 8.80 42.91 3.28
137 138 3.154710 CCTTCAGAGGGGTTAACCAAAC 58.845 50.000 25.71 14.87 42.91 2.93
148 149 4.251543 GTTAACCAAACCCCACTTGATG 57.748 45.455 0.00 0.00 31.38 3.07
151 152 3.603965 ACCAAACCCCACTTGATGTAA 57.396 42.857 0.00 0.00 0.00 2.41
152 153 4.126520 ACCAAACCCCACTTGATGTAAT 57.873 40.909 0.00 0.00 0.00 1.89
153 154 4.488770 ACCAAACCCCACTTGATGTAATT 58.511 39.130 0.00 0.00 0.00 1.40
154 155 5.646215 ACCAAACCCCACTTGATGTAATTA 58.354 37.500 0.00 0.00 0.00 1.40
156 157 5.127031 CCAAACCCCACTTGATGTAATTAGG 59.873 44.000 0.00 0.00 0.00 2.69
158 159 3.222603 CCCCACTTGATGTAATTAGGGC 58.777 50.000 0.00 0.00 33.68 5.19
160 161 3.885297 CCCACTTGATGTAATTAGGGCAG 59.115 47.826 0.00 0.00 0.00 4.85
161 162 4.526970 CCACTTGATGTAATTAGGGCAGT 58.473 43.478 0.00 0.00 0.00 4.40
162 163 4.576463 CCACTTGATGTAATTAGGGCAGTC 59.424 45.833 0.00 0.00 0.00 3.51
165 166 6.017605 CACTTGATGTAATTAGGGCAGTCATC 60.018 42.308 0.00 0.00 0.00 2.92
166 167 5.894298 TGATGTAATTAGGGCAGTCATCT 57.106 39.130 9.87 0.00 33.67 2.90
167 168 5.858381 TGATGTAATTAGGGCAGTCATCTC 58.142 41.667 9.87 0.00 33.67 2.75
168 169 4.689612 TGTAATTAGGGCAGTCATCTCC 57.310 45.455 0.00 0.00 0.00 3.71
169 170 2.918712 AATTAGGGCAGTCATCTCCG 57.081 50.000 0.00 0.00 0.00 4.63
171 172 1.112113 TTAGGGCAGTCATCTCCGAC 58.888 55.000 0.00 0.00 36.08 4.79
172 173 0.755698 TAGGGCAGTCATCTCCGACC 60.756 60.000 0.00 0.00 36.52 4.79
173 174 2.060980 GGGCAGTCATCTCCGACCT 61.061 63.158 0.00 0.00 36.52 3.85
174 175 1.439644 GGCAGTCATCTCCGACCTC 59.560 63.158 0.00 0.00 36.52 3.85
175 176 1.064946 GCAGTCATCTCCGACCTCG 59.935 63.158 0.00 0.00 36.52 4.63
176 177 1.064946 CAGTCATCTCCGACCTCGC 59.935 63.158 0.00 0.00 36.52 5.03
177 178 1.077357 AGTCATCTCCGACCTCGCT 60.077 57.895 0.00 0.00 36.52 4.93
179 180 1.098712 GTCATCTCCGACCTCGCTCT 61.099 60.000 0.00 0.00 38.18 4.09
180 181 0.816018 TCATCTCCGACCTCGCTCTC 60.816 60.000 0.00 0.00 38.18 3.20
181 182 0.817634 CATCTCCGACCTCGCTCTCT 60.818 60.000 0.00 0.00 38.18 3.10
182 183 0.817634 ATCTCCGACCTCGCTCTCTG 60.818 60.000 0.00 0.00 38.18 3.35
183 184 2.438614 TCCGACCTCGCTCTCTGG 60.439 66.667 0.00 0.00 38.18 3.86
184 185 2.752238 CCGACCTCGCTCTCTGGT 60.752 66.667 0.00 0.00 38.18 4.00
185 186 2.766400 CCGACCTCGCTCTCTGGTC 61.766 68.421 0.00 0.00 44.82 4.02
187 188 1.509004 GACCTCGCTCTCTGGTCAC 59.491 63.158 6.52 0.00 46.79 3.67
188 189 1.228583 ACCTCGCTCTCTGGTCACA 60.229 57.895 0.00 0.00 0.00 3.58
189 190 1.214062 CCTCGCTCTCTGGTCACAC 59.786 63.158 0.00 0.00 0.00 3.82
190 191 1.214062 CTCGCTCTCTGGTCACACC 59.786 63.158 0.00 0.00 39.22 4.16
191 192 2.126307 CGCTCTCTGGTCACACCG 60.126 66.667 0.00 0.00 42.58 4.94
192 193 2.433318 GCTCTCTGGTCACACCGC 60.433 66.667 0.00 0.00 42.58 5.68
194 195 2.203640 TCTCTGGTCACACCGCCT 60.204 61.111 0.00 0.00 42.58 5.52
196 197 2.203640 TCTGGTCACACCGCCTCT 60.204 61.111 0.00 0.00 42.58 3.69
197 198 2.219325 CTCTGGTCACACCGCCTCTC 62.219 65.000 0.00 0.00 42.58 3.20
199 200 2.099652 CTGGTCACACCGCCTCTCAA 62.100 60.000 0.00 0.00 42.58 3.02
201 202 0.951040 GGTCACACCGCCTCTCAAAG 60.951 60.000 0.00 0.00 0.00 2.77
210 211 3.322514 CCTCTCAAAGGCGGAACAA 57.677 52.632 0.00 0.00 38.67 2.83
212 213 2.162681 CCTCTCAAAGGCGGAACAAAT 58.837 47.619 0.00 0.00 38.67 2.32
214 215 3.756434 CCTCTCAAAGGCGGAACAAATAA 59.244 43.478 0.00 0.00 38.67 1.40
215 216 4.399303 CCTCTCAAAGGCGGAACAAATAAT 59.601 41.667 0.00 0.00 38.67 1.28
216 217 5.449177 CCTCTCAAAGGCGGAACAAATAATC 60.449 44.000 0.00 0.00 38.67 1.75
217 218 4.398044 TCTCAAAGGCGGAACAAATAATCC 59.602 41.667 0.00 0.00 0.00 3.01
218 219 4.082845 TCAAAGGCGGAACAAATAATCCA 58.917 39.130 0.00 0.00 35.34 3.41
219 220 4.709397 TCAAAGGCGGAACAAATAATCCAT 59.291 37.500 0.00 0.00 35.34 3.41
220 221 4.654091 AAGGCGGAACAAATAATCCATG 57.346 40.909 0.00 0.00 35.34 3.66
221 222 2.362077 AGGCGGAACAAATAATCCATGC 59.638 45.455 0.00 0.00 35.34 4.06
222 223 2.545742 GGCGGAACAAATAATCCATGCC 60.546 50.000 0.00 0.00 35.83 4.40
223 224 2.858260 GCGGAACAAATAATCCATGCCG 60.858 50.000 0.00 0.00 39.23 5.69
225 226 2.693074 GGAACAAATAATCCATGCCGGT 59.307 45.455 1.90 0.00 35.71 5.28
226 227 3.243401 GGAACAAATAATCCATGCCGGTC 60.243 47.826 1.90 0.00 35.71 4.79
227 228 3.297134 ACAAATAATCCATGCCGGTCT 57.703 42.857 1.90 0.00 35.57 3.85
228 229 2.951642 ACAAATAATCCATGCCGGTCTG 59.048 45.455 1.90 0.11 35.57 3.51
229 230 2.951642 CAAATAATCCATGCCGGTCTGT 59.048 45.455 1.90 0.00 35.57 3.41
230 231 2.260844 ATAATCCATGCCGGTCTGTG 57.739 50.000 1.90 0.00 35.57 3.66
231 232 0.180171 TAATCCATGCCGGTCTGTGG 59.820 55.000 1.90 6.77 35.57 4.17
238 239 4.096003 CCGGTCTGTGGCGGGATT 62.096 66.667 0.00 0.00 0.00 3.01
239 240 2.046314 CGGTCTGTGGCGGGATTT 60.046 61.111 0.00 0.00 0.00 2.17
240 241 2.106683 CGGTCTGTGGCGGGATTTC 61.107 63.158 0.00 0.00 0.00 2.17
241 242 1.299976 GGTCTGTGGCGGGATTTCT 59.700 57.895 0.00 0.00 0.00 2.52
242 243 0.322546 GGTCTGTGGCGGGATTTCTT 60.323 55.000 0.00 0.00 0.00 2.52
243 244 1.087501 GTCTGTGGCGGGATTTCTTC 58.912 55.000 0.00 0.00 0.00 2.87
244 245 0.984230 TCTGTGGCGGGATTTCTTCT 59.016 50.000 0.00 0.00 0.00 2.85
245 246 1.066143 TCTGTGGCGGGATTTCTTCTC 60.066 52.381 0.00 0.00 0.00 2.87
247 248 0.253327 GTGGCGGGATTTCTTCTCCT 59.747 55.000 0.00 0.00 33.05 3.69
248 249 0.541863 TGGCGGGATTTCTTCTCCTC 59.458 55.000 0.00 0.00 33.05 3.71
249 250 0.833949 GGCGGGATTTCTTCTCCTCT 59.166 55.000 0.00 0.00 33.05 3.69
250 251 1.202592 GGCGGGATTTCTTCTCCTCTC 60.203 57.143 0.00 0.00 33.05 3.20
251 252 1.537135 GCGGGATTTCTTCTCCTCTCG 60.537 57.143 0.00 0.00 33.05 4.04
252 253 1.751924 CGGGATTTCTTCTCCTCTCGT 59.248 52.381 0.00 0.00 33.05 4.18
255 256 3.449377 GGGATTTCTTCTCCTCTCGTCTT 59.551 47.826 0.00 0.00 33.05 3.01
256 257 4.645588 GGGATTTCTTCTCCTCTCGTCTTA 59.354 45.833 0.00 0.00 33.05 2.10
258 259 5.450826 GGATTTCTTCTCCTCTCGTCTTACC 60.451 48.000 0.00 0.00 0.00 2.85
260 261 5.432680 TTCTTCTCCTCTCGTCTTACCTA 57.567 43.478 0.00 0.00 0.00 3.08
261 262 5.432680 TCTTCTCCTCTCGTCTTACCTAA 57.567 43.478 0.00 0.00 0.00 2.69
262 263 5.813383 TCTTCTCCTCTCGTCTTACCTAAA 58.187 41.667 0.00 0.00 0.00 1.85
263 264 6.243900 TCTTCTCCTCTCGTCTTACCTAAAA 58.756 40.000 0.00 0.00 0.00 1.52
265 266 5.568392 TCTCCTCTCGTCTTACCTAAAACT 58.432 41.667 0.00 0.00 0.00 2.66
266 267 6.008960 TCTCCTCTCGTCTTACCTAAAACTT 58.991 40.000 0.00 0.00 0.00 2.66
267 268 6.492772 TCTCCTCTCGTCTTACCTAAAACTTT 59.507 38.462 0.00 0.00 0.00 2.66
268 269 6.453092 TCCTCTCGTCTTACCTAAAACTTTG 58.547 40.000 0.00 0.00 0.00 2.77
269 270 6.041296 TCCTCTCGTCTTACCTAAAACTTTGT 59.959 38.462 0.00 0.00 0.00 2.83
270 271 6.365518 CCTCTCGTCTTACCTAAAACTTTGTC 59.634 42.308 0.00 0.00 0.00 3.18
273 274 5.916883 TCGTCTTACCTAAAACTTTGTCGAG 59.083 40.000 0.00 0.00 0.00 4.04
274 275 5.689068 CGTCTTACCTAAAACTTTGTCGAGT 59.311 40.000 0.00 0.00 0.00 4.18
275 276 6.857964 CGTCTTACCTAAAACTTTGTCGAGTA 59.142 38.462 0.00 0.00 0.00 2.59
276 277 7.149063 CGTCTTACCTAAAACTTTGTCGAGTAC 60.149 40.741 0.00 0.00 0.00 2.73
277 278 7.649306 GTCTTACCTAAAACTTTGTCGAGTACA 59.351 37.037 0.00 0.00 35.88 2.90
279 280 5.910614 ACCTAAAACTTTGTCGAGTACACT 58.089 37.500 0.00 0.00 38.00 3.55
280 281 6.343703 ACCTAAAACTTTGTCGAGTACACTT 58.656 36.000 0.00 0.00 38.00 3.16
281 282 6.820152 ACCTAAAACTTTGTCGAGTACACTTT 59.180 34.615 0.00 0.00 38.00 2.66
282 283 7.335171 ACCTAAAACTTTGTCGAGTACACTTTT 59.665 33.333 0.00 0.00 38.00 2.27
283 284 8.179615 CCTAAAACTTTGTCGAGTACACTTTTT 58.820 33.333 0.00 0.00 38.00 1.94
284 285 7.790861 AAAACTTTGTCGAGTACACTTTTTG 57.209 32.000 0.00 0.00 38.00 2.44
286 287 6.730960 ACTTTGTCGAGTACACTTTTTGAA 57.269 33.333 0.00 0.00 38.00 2.69
288 289 7.758495 ACTTTGTCGAGTACACTTTTTGAAAT 58.242 30.769 0.00 0.00 38.00 2.17
289 290 8.885722 ACTTTGTCGAGTACACTTTTTGAAATA 58.114 29.630 0.00 0.00 38.00 1.40
290 291 9.878599 CTTTGTCGAGTACACTTTTTGAAATAT 57.121 29.630 0.00 0.00 38.00 1.28
301 302 8.531146 ACACTTTTTGAAATATATTCAGGTGGG 58.469 33.333 0.00 0.00 0.00 4.61
302 303 8.748412 CACTTTTTGAAATATATTCAGGTGGGA 58.252 33.333 0.00 0.00 0.00 4.37
303 304 9.320295 ACTTTTTGAAATATATTCAGGTGGGAA 57.680 29.630 0.00 0.00 0.00 3.97
304 305 9.807649 CTTTTTGAAATATATTCAGGTGGGAAG 57.192 33.333 0.00 0.00 0.00 3.46
305 306 6.959639 TTGAAATATATTCAGGTGGGAAGC 57.040 37.500 0.00 0.00 0.00 3.86
306 307 5.385198 TGAAATATATTCAGGTGGGAAGCC 58.615 41.667 0.00 0.00 0.00 4.35
307 308 5.134339 TGAAATATATTCAGGTGGGAAGCCT 59.866 40.000 0.00 0.00 36.66 4.58
310 311 2.222227 ATTCAGGTGGGAAGCCTTTC 57.778 50.000 0.00 0.00 33.31 2.62
330 331 2.065899 CCCCCAGTGACAGTTTCAAA 57.934 50.000 0.00 0.00 35.39 2.69
331 332 2.383855 CCCCCAGTGACAGTTTCAAAA 58.616 47.619 0.00 0.00 35.39 2.44
332 333 2.763448 CCCCCAGTGACAGTTTCAAAAA 59.237 45.455 0.00 0.00 35.39 1.94
374 2530 1.000955 ACTTGCCTCTACGTTGACCAG 59.999 52.381 0.00 0.00 0.00 4.00
403 2559 9.190858 CATAGTCTACATCTGAACTTAGAATGC 57.809 37.037 0.00 0.00 0.00 3.56
405 2561 6.095580 AGTCTACATCTGAACTTAGAATGCGA 59.904 38.462 0.00 0.00 0.00 5.10
406 2562 6.920758 GTCTACATCTGAACTTAGAATGCGAT 59.079 38.462 0.00 0.00 0.00 4.58
466 2622 1.898574 CGCAAGTCAACCCTGCCTT 60.899 57.895 0.00 0.00 0.00 4.35
469 2625 1.531602 AAGTCAACCCTGCCTTGCC 60.532 57.895 0.00 0.00 0.00 4.52
487 2646 6.576185 CCTTGCCAGCATTGTTATTTTATCT 58.424 36.000 0.00 0.00 0.00 1.98
636 2800 2.509166 TCGTCCACTGACTATCACCT 57.491 50.000 0.00 0.00 39.47 4.00
711 3131 3.813443 AGATACACATCCATGTTGCTCC 58.187 45.455 0.00 0.00 39.39 4.70
729 3149 1.075050 TCCTACCTCTTCGTCACCACT 59.925 52.381 0.00 0.00 0.00 4.00
738 3228 2.507854 CGTCACCACTCCACCCAGT 61.508 63.158 0.00 0.00 0.00 4.00
771 3261 9.153721 TGTTACCCAACAATCTTTTATAGTACG 57.846 33.333 0.00 0.00 41.69 3.67
791 4233 0.803740 CGTACTAGCTAGATCCGGCC 59.196 60.000 27.45 0.00 0.00 6.13
906 4765 0.326618 AGATGGTCAACCGGGGAGAT 60.327 55.000 6.32 0.00 39.43 2.75
911 4770 0.759346 GTCAACCGGGGAGATAGCAT 59.241 55.000 6.32 0.00 0.00 3.79
942 4801 5.416947 TCAGTTCTTATAAAAGCGAGGACC 58.583 41.667 0.00 0.00 32.36 4.46
969 4829 1.542108 GCAGGAGAAGCACAACAGAGT 60.542 52.381 0.00 0.00 0.00 3.24
1029 4889 4.301628 CAAGAACCAAAATGCTCTTGTCC 58.698 43.478 10.12 0.00 39.83 4.02
1043 4903 0.478072 TTGTCCCTTGCCATCTGTGT 59.522 50.000 0.00 0.00 0.00 3.72
1069 4929 2.338620 CACTCGTGCACCTTCCGA 59.661 61.111 12.15 3.47 0.00 4.55
1131 5000 1.302033 CAAGAAGGCGCTCCACAGT 60.302 57.895 7.64 0.00 33.74 3.55
1140 5009 1.519719 GCTCCACAGTAGCCTCCTG 59.480 63.158 0.00 0.00 33.73 3.86
1266 5135 3.134127 GGGTACTACGACGCCGGT 61.134 66.667 1.90 0.00 40.78 5.28
1289 5158 2.357517 CGTCAAGTTCGGCCTGCT 60.358 61.111 0.00 0.00 0.00 4.24
1994 6886 4.247380 GCCGGCCTCCAGATCCTG 62.247 72.222 18.11 0.00 0.00 3.86
2504 7671 0.456221 CGCAGACCGACTATGTCCTT 59.544 55.000 0.00 0.00 40.02 3.36
2812 7979 1.282570 CACACTTGCACGGCGAAAT 59.717 52.632 16.62 0.00 0.00 2.17
2845 8444 5.049129 CGAAGAAAAGCTGAACAGGAAGAAT 60.049 40.000 3.99 0.00 0.00 2.40
2846 8445 6.514048 CGAAGAAAAGCTGAACAGGAAGAATT 60.514 38.462 3.99 0.00 0.00 2.17
2847 8446 6.324561 AGAAAAGCTGAACAGGAAGAATTC 57.675 37.500 0.00 0.00 46.67 2.17
2848 8447 6.067350 AGAAAAGCTGAACAGGAAGAATTCT 58.933 36.000 0.88 0.88 46.56 2.40
2849 8448 7.227156 AGAAAAGCTGAACAGGAAGAATTCTA 58.773 34.615 8.75 0.00 46.56 2.10
2850 8449 7.721399 AGAAAAGCTGAACAGGAAGAATTCTAA 59.279 33.333 8.75 0.00 46.56 2.10
2851 8450 7.446001 AAAGCTGAACAGGAAGAATTCTAAG 57.554 36.000 8.75 1.85 46.56 2.18
2852 8451 6.365970 AGCTGAACAGGAAGAATTCTAAGA 57.634 37.500 8.75 0.00 46.56 2.10
2853 8452 6.956497 AGCTGAACAGGAAGAATTCTAAGAT 58.044 36.000 8.75 0.00 46.56 2.40
2854 8453 6.822676 AGCTGAACAGGAAGAATTCTAAGATG 59.177 38.462 8.75 8.16 46.56 2.90
2855 8454 6.038050 GCTGAACAGGAAGAATTCTAAGATGG 59.962 42.308 8.75 0.00 46.56 3.51
2856 8455 5.882557 TGAACAGGAAGAATTCTAAGATGGC 59.117 40.000 8.75 3.92 46.56 4.40
2857 8456 5.707066 ACAGGAAGAATTCTAAGATGGCT 57.293 39.130 8.75 0.00 46.56 4.75
2858 8457 5.679601 ACAGGAAGAATTCTAAGATGGCTC 58.320 41.667 8.75 0.00 46.56 4.70
2905 8506 9.528018 TTTACAAAACTGATCTGGATGTTTTTC 57.472 29.630 4.49 0.00 39.59 2.29
2906 8507 6.515832 ACAAAACTGATCTGGATGTTTTTCC 58.484 36.000 4.49 0.00 39.59 3.13
2907 8508 5.376854 AAACTGATCTGGATGTTTTTCCG 57.623 39.130 4.49 0.00 38.74 4.30
2909 8510 3.753272 ACTGATCTGGATGTTTTTCCGTG 59.247 43.478 4.49 0.00 38.74 4.94
2941 8553 9.787435 AGTTTAACTGTTGGAGTGTTCATATTA 57.213 29.630 2.69 0.00 34.02 0.98
2950 8562 8.688151 GTTGGAGTGTTCATATTAGTAGAGAGT 58.312 37.037 0.00 0.00 0.00 3.24
2951 8563 9.916360 TTGGAGTGTTCATATTAGTAGAGAGTA 57.084 33.333 0.00 0.00 0.00 2.59
2969 8581 5.865085 AGAGTATAGAGAGTGCAGAGTAGG 58.135 45.833 0.00 0.00 0.00 3.18
3000 8612 4.923281 GTGGTTTGCAAACAAGATGGATAC 59.077 41.667 35.95 19.05 40.63 2.24
3001 8613 4.832266 TGGTTTGCAAACAAGATGGATACT 59.168 37.500 35.95 0.00 40.63 2.12
3002 8614 6.007076 TGGTTTGCAAACAAGATGGATACTA 58.993 36.000 35.95 7.91 40.63 1.82
3003 8615 6.072175 TGGTTTGCAAACAAGATGGATACTAC 60.072 38.462 35.95 18.08 40.63 2.73
3004 8616 6.151144 GGTTTGCAAACAAGATGGATACTACT 59.849 38.462 35.95 0.00 40.63 2.57
3005 8617 6.985188 TTGCAAACAAGATGGATACTACTC 57.015 37.500 0.00 0.00 37.61 2.59
3006 8618 5.428253 TGCAAACAAGATGGATACTACTCC 58.572 41.667 0.00 0.00 35.74 3.85
3007 8619 5.189736 TGCAAACAAGATGGATACTACTCCT 59.810 40.000 0.00 0.00 36.20 3.69
3021 8633 4.483950 ACTACTCCTAGATTGCATGGCTA 58.516 43.478 0.00 0.00 0.00 3.93
3024 8636 3.455910 ACTCCTAGATTGCATGGCTACAA 59.544 43.478 0.00 0.00 0.00 2.41
3041 8653 1.275010 ACAAAGGCCGGCATTTTAAGG 59.725 47.619 34.50 24.92 0.00 2.69
3044 8656 0.039035 AGGCCGGCATTTTAAGGTGA 59.961 50.000 30.85 0.00 0.00 4.02
3045 8657 0.892063 GGCCGGCATTTTAAGGTGAA 59.108 50.000 30.85 0.00 0.00 3.18
3046 8658 1.403647 GGCCGGCATTTTAAGGTGAAC 60.404 52.381 30.85 0.45 0.00 3.18
3051 9781 4.142182 CCGGCATTTTAAGGTGAACATGAT 60.142 41.667 0.00 0.00 0.00 2.45
3053 9783 5.289193 CGGCATTTTAAGGTGAACATGATTG 59.711 40.000 0.00 0.00 0.00 2.67
3060 9790 9.883142 TTTTAAGGTGAACATGATTGAACTTTT 57.117 25.926 0.00 0.00 0.00 2.27
3061 9791 9.883142 TTTAAGGTGAACATGATTGAACTTTTT 57.117 25.926 0.00 0.00 0.00 1.94
3085 9815 5.389642 TTTATCAGCTCGCTATTGTTTCG 57.610 39.130 0.00 0.00 0.00 3.46
3086 9816 2.647529 TCAGCTCGCTATTGTTTCGA 57.352 45.000 0.00 0.00 0.00 3.71
3087 9817 2.954316 TCAGCTCGCTATTGTTTCGAA 58.046 42.857 0.00 0.00 0.00 3.71
3088 9818 3.521560 TCAGCTCGCTATTGTTTCGAAT 58.478 40.909 0.00 0.00 0.00 3.34
3090 9820 5.106442 TCAGCTCGCTATTGTTTCGAATTA 58.894 37.500 0.00 0.00 0.00 1.40
3091 9821 5.753438 TCAGCTCGCTATTGTTTCGAATTAT 59.247 36.000 0.00 0.00 0.00 1.28
3093 9823 7.598869 TCAGCTCGCTATTGTTTCGAATTATAT 59.401 33.333 0.00 0.00 0.00 0.86
3094 9824 7.685712 CAGCTCGCTATTGTTTCGAATTATATG 59.314 37.037 0.00 0.00 0.00 1.78
3095 9825 6.462949 GCTCGCTATTGTTTCGAATTATATGC 59.537 38.462 0.00 0.00 0.00 3.14
3098 9828 6.247165 CGCTATTGTTTCGAATTATATGCAGC 59.753 38.462 0.00 0.47 0.00 5.25
3099 9829 7.077605 GCTATTGTTTCGAATTATATGCAGCA 58.922 34.615 0.00 0.00 0.00 4.41
3100 9830 7.591057 GCTATTGTTTCGAATTATATGCAGCAA 59.409 33.333 0.00 0.00 0.00 3.91
3101 9831 9.449550 CTATTGTTTCGAATTATATGCAGCAAA 57.550 29.630 0.00 0.00 0.00 3.68
3102 9832 8.700722 ATTGTTTCGAATTATATGCAGCAAAA 57.299 26.923 0.00 0.00 0.00 2.44
3103 9833 7.504922 TGTTTCGAATTATATGCAGCAAAAC 57.495 32.000 0.00 2.83 0.00 2.43
3104 9834 7.087007 TGTTTCGAATTATATGCAGCAAAACA 58.913 30.769 10.71 10.71 32.34 2.83
3105 9835 7.596621 TGTTTCGAATTATATGCAGCAAAACAA 59.403 29.630 11.88 0.50 31.99 2.83
3108 9838 6.632434 TCGAATTATATGCAGCAAAACAATCG 59.368 34.615 0.00 6.89 0.00 3.34
3109 9839 6.414694 CGAATTATATGCAGCAAAACAATCGT 59.585 34.615 0.00 0.00 0.00 3.73
3110 9840 7.044117 CGAATTATATGCAGCAAAACAATCGTT 60.044 33.333 0.00 0.00 36.73 3.85
3112 9842 9.579768 AATTATATGCAGCAAAACAATCGTTAA 57.420 25.926 0.00 0.00 33.99 2.01
3113 9843 8.972262 TTATATGCAGCAAAACAATCGTTAAA 57.028 26.923 0.00 0.00 33.99 1.52
3114 9844 5.574815 ATGCAGCAAAACAATCGTTAAAC 57.425 34.783 0.00 0.00 33.99 2.01
3115 9845 4.424626 TGCAGCAAAACAATCGTTAAACA 58.575 34.783 0.00 0.00 33.99 2.83
3116 9846 4.864806 TGCAGCAAAACAATCGTTAAACAA 59.135 33.333 0.00 0.00 33.99 2.83
3117 9847 5.348724 TGCAGCAAAACAATCGTTAAACAAA 59.651 32.000 0.00 0.00 33.99 2.83
3118 9848 5.895889 GCAGCAAAACAATCGTTAAACAAAG 59.104 36.000 0.00 0.00 33.99 2.77
3119 9849 5.895889 CAGCAAAACAATCGTTAAACAAAGC 59.104 36.000 0.00 0.00 33.99 3.51
3120 9850 5.006261 AGCAAAACAATCGTTAAACAAAGCC 59.994 36.000 0.00 0.00 33.99 4.35
3121 9851 5.733299 CAAAACAATCGTTAAACAAAGCCC 58.267 37.500 0.00 0.00 33.99 5.19
3123 9853 6.394025 AAACAATCGTTAAACAAAGCCCTA 57.606 33.333 0.00 0.00 33.99 3.53
3126 9856 6.232692 ACAATCGTTAAACAAAGCCCTACTA 58.767 36.000 0.00 0.00 0.00 1.82
3127 9857 6.370718 ACAATCGTTAAACAAAGCCCTACTAG 59.629 38.462 0.00 0.00 0.00 2.57
3128 9858 5.726980 TCGTTAAACAAAGCCCTACTAGA 57.273 39.130 0.00 0.00 0.00 2.43
3130 9860 6.523840 TCGTTAAACAAAGCCCTACTAGAAA 58.476 36.000 0.00 0.00 0.00 2.52
3131 9861 6.991531 TCGTTAAACAAAGCCCTACTAGAAAA 59.008 34.615 0.00 0.00 0.00 2.29
3132 9862 7.662669 TCGTTAAACAAAGCCCTACTAGAAAAT 59.337 33.333 0.00 0.00 0.00 1.82
3133 9863 7.749126 CGTTAAACAAAGCCCTACTAGAAAATG 59.251 37.037 0.00 0.00 0.00 2.32
3134 9864 6.590234 AAACAAAGCCCTACTAGAAAATGG 57.410 37.500 0.00 0.00 0.00 3.16
3136 9866 5.254115 ACAAAGCCCTACTAGAAAATGGAC 58.746 41.667 0.00 0.00 0.00 4.02
3137 9867 5.014228 ACAAAGCCCTACTAGAAAATGGACT 59.986 40.000 0.00 0.00 0.00 3.85
3138 9868 5.360649 AAGCCCTACTAGAAAATGGACTC 57.639 43.478 0.00 0.00 0.00 3.36
3139 9869 3.712218 AGCCCTACTAGAAAATGGACTCC 59.288 47.826 0.00 0.00 0.00 3.85
3140 9870 3.454812 GCCCTACTAGAAAATGGACTCCA 59.545 47.826 0.00 0.00 38.19 3.86
3141 9871 4.683671 GCCCTACTAGAAAATGGACTCCAC 60.684 50.000 0.00 0.00 35.80 4.02
3142 9872 4.141688 CCCTACTAGAAAATGGACTCCACC 60.142 50.000 0.00 0.00 35.80 4.61
3144 9874 4.828072 ACTAGAAAATGGACTCCACCTC 57.172 45.455 0.00 0.00 35.80 3.85
3145 9875 4.168101 ACTAGAAAATGGACTCCACCTCA 58.832 43.478 0.00 0.00 35.80 3.86
3146 9876 4.785376 ACTAGAAAATGGACTCCACCTCAT 59.215 41.667 0.00 0.00 35.80 2.90
3147 9877 3.960571 AGAAAATGGACTCCACCTCATG 58.039 45.455 0.00 0.00 35.80 3.07
3149 9879 0.107508 AATGGACTCCACCTCATGCG 60.108 55.000 0.00 0.00 35.80 4.73
3150 9880 1.976132 ATGGACTCCACCTCATGCGG 61.976 60.000 0.00 0.00 35.80 5.69
3151 9881 2.359169 GGACTCCACCTCATGCGGA 61.359 63.158 9.17 0.82 0.00 5.54
3152 9882 1.153549 GACTCCACCTCATGCGGAC 60.154 63.158 9.17 0.00 0.00 4.79
3153 9883 1.888436 GACTCCACCTCATGCGGACA 61.888 60.000 9.17 0.00 0.00 4.02
3154 9884 1.448540 CTCCACCTCATGCGGACAC 60.449 63.158 9.17 0.00 0.00 3.67
3155 9885 2.171209 CTCCACCTCATGCGGACACA 62.171 60.000 9.17 0.00 0.00 3.72
3156 9886 2.034879 CCACCTCATGCGGACACAC 61.035 63.158 9.17 0.00 0.00 3.82
3157 9887 1.004560 CACCTCATGCGGACACACT 60.005 57.895 9.17 0.00 0.00 3.55
3158 9888 0.246360 CACCTCATGCGGACACACTA 59.754 55.000 9.17 0.00 0.00 2.74
3159 9889 0.973632 ACCTCATGCGGACACACTAA 59.026 50.000 9.17 0.00 0.00 2.24
3160 9890 1.346395 ACCTCATGCGGACACACTAAA 59.654 47.619 9.17 0.00 0.00 1.85
3161 9891 2.027192 ACCTCATGCGGACACACTAAAT 60.027 45.455 9.17 0.00 0.00 1.40
3162 9892 3.196901 ACCTCATGCGGACACACTAAATA 59.803 43.478 9.17 0.00 0.00 1.40
3163 9893 4.141711 ACCTCATGCGGACACACTAAATAT 60.142 41.667 9.17 0.00 0.00 1.28
3164 9894 4.816385 CCTCATGCGGACACACTAAATATT 59.184 41.667 0.00 0.00 0.00 1.28
3167 9897 7.241663 TCATGCGGACACACTAAATATTAAC 57.758 36.000 0.00 0.00 0.00 2.01
3169 9899 6.411630 TGCGGACACACTAAATATTAACAC 57.588 37.500 0.00 0.00 0.00 3.32
3170 9900 5.062433 TGCGGACACACTAAATATTAACACG 59.938 40.000 0.00 0.00 0.00 4.49
3171 9901 5.501252 GCGGACACACTAAATATTAACACGG 60.501 44.000 0.00 0.00 0.00 4.94
3172 9902 5.806502 CGGACACACTAAATATTAACACGGA 59.193 40.000 0.00 0.00 0.00 4.69
3173 9903 6.477688 CGGACACACTAAATATTAACACGGAT 59.522 38.462 0.00 0.00 0.00 4.18
3174 9904 7.516155 CGGACACACTAAATATTAACACGGATG 60.516 40.741 0.00 0.00 0.00 3.51
3175 9905 7.254658 GGACACACTAAATATTAACACGGATGG 60.255 40.741 0.00 0.00 0.00 3.51
3176 9906 7.107542 ACACACTAAATATTAACACGGATGGT 58.892 34.615 0.00 0.00 0.00 3.55
3187 9917 4.467084 GGATGGTGCCTTCCGCGA 62.467 66.667 8.23 0.00 42.08 5.87
3188 9918 2.435938 GATGGTGCCTTCCGCGAA 60.436 61.111 8.23 0.00 42.08 4.70
3189 9919 2.436646 ATGGTGCCTTCCGCGAAG 60.437 61.111 8.23 9.55 42.08 3.79
3190 9920 2.852495 GATGGTGCCTTCCGCGAAGA 62.852 60.000 8.23 0.00 41.71 2.87
3191 9921 2.815647 GGTGCCTTCCGCGAAGAG 60.816 66.667 8.23 1.49 41.71 2.85
3193 9923 2.095252 GTGCCTTCCGCGAAGAGTC 61.095 63.158 8.23 3.47 41.71 3.36
3194 9924 2.276116 TGCCTTCCGCGAAGAGTCT 61.276 57.895 8.23 0.00 41.71 3.24
3195 9925 1.517475 GCCTTCCGCGAAGAGTCTC 60.517 63.158 8.23 0.00 41.71 3.36
3197 9927 0.528470 CCTTCCGCGAAGAGTCTCTT 59.472 55.000 15.14 15.14 41.71 2.85
3198 9928 1.067495 CCTTCCGCGAAGAGTCTCTTT 60.067 52.381 16.26 0.70 41.71 2.52
3199 9929 2.255316 CTTCCGCGAAGAGTCTCTTTC 58.745 52.381 16.26 10.33 41.71 2.62
3200 9930 0.526662 TCCGCGAAGAGTCTCTTTCC 59.473 55.000 16.26 9.39 36.73 3.13
3202 9932 0.798771 CGCGAAGAGTCTCTTTCCGG 60.799 60.000 16.26 0.00 36.73 5.14
3203 9933 0.526662 GCGAAGAGTCTCTTTCCGGA 59.473 55.000 16.26 0.00 36.73 5.14
3204 9934 1.468395 GCGAAGAGTCTCTTTCCGGAG 60.468 57.143 16.26 0.00 36.73 4.63
3205 9935 1.133407 CGAAGAGTCTCTTTCCGGAGG 59.867 57.143 16.26 1.75 43.63 4.30
3206 9936 1.134936 GAAGAGTCTCTTTCCGGAGGC 60.135 57.143 16.26 0.00 42.44 4.70
3216 9946 3.330720 CCGGAGGCTGGGGTTTCT 61.331 66.667 0.00 0.00 46.14 2.52
3217 9947 2.757077 CGGAGGCTGGGGTTTCTT 59.243 61.111 0.00 0.00 0.00 2.52
3219 9949 0.326927 CGGAGGCTGGGGTTTCTTAA 59.673 55.000 0.00 0.00 0.00 1.85
3220 9950 1.271707 CGGAGGCTGGGGTTTCTTAAA 60.272 52.381 0.00 0.00 0.00 1.52
3222 9952 3.441101 GGAGGCTGGGGTTTCTTAAAAT 58.559 45.455 0.00 0.00 0.00 1.82
3223 9953 3.447586 GGAGGCTGGGGTTTCTTAAAATC 59.552 47.826 0.00 0.00 0.00 2.17
3224 9954 4.086457 GAGGCTGGGGTTTCTTAAAATCA 58.914 43.478 0.00 0.00 0.00 2.57
3228 10175 4.141937 GCTGGGGTTTCTTAAAATCATCCC 60.142 45.833 0.00 0.00 0.00 3.85
3234 10181 7.310983 GGGGTTTCTTAAAATCATCCCAAATCA 60.311 37.037 0.00 0.00 31.52 2.57
3235 10182 8.267183 GGGTTTCTTAAAATCATCCCAAATCAT 58.733 33.333 0.00 0.00 30.70 2.45
3251 10198 6.131961 CCAAATCATCCTTTTGGTCCTCTAT 58.868 40.000 6.96 0.00 45.25 1.98
3252 10199 7.290061 CCAAATCATCCTTTTGGTCCTCTATA 58.710 38.462 6.96 0.00 45.25 1.31
3266 10213 7.280356 TGGTCCTCTATACTTAAAATGCTTCC 58.720 38.462 0.00 0.00 0.00 3.46
3283 10231 4.191544 GCTTCCCAATTAAAAGCCCATTC 58.808 43.478 7.17 0.00 39.55 2.67
3288 10236 6.237154 TCCCAATTAAAAGCCCATTCTTTTG 58.763 36.000 10.65 0.00 43.68 2.44
3298 10248 5.793817 AGCCCATTCTTTTGACCAAATTAC 58.206 37.500 0.00 0.00 0.00 1.89
3313 10263 9.921637 TGACCAAATTACACAAGGAAATATTTC 57.078 29.630 18.22 18.22 36.46 2.17
3325 10275 7.764901 ACAAGGAAATATTTCTCTTCGGAGTAC 59.235 37.037 23.85 6.41 42.38 2.73
3341 10291 3.830755 GGAGTACTCCTTGGTGTACTTCA 59.169 47.826 31.12 0.00 46.23 3.02
3342 10292 4.466726 GGAGTACTCCTTGGTGTACTTCAT 59.533 45.833 31.12 11.49 46.23 2.57
3354 10304 3.437049 GTGTACTTCATGGGCTTCTGTTC 59.563 47.826 0.00 0.00 0.00 3.18
3359 10309 1.377725 ATGGGCTTCTGTTCAGGCG 60.378 57.895 0.00 0.00 37.71 5.52
3363 10313 1.081840 GCTTCTGTTCAGGCGCAAC 60.082 57.895 10.83 5.86 0.00 4.17
3381 10331 5.116180 CGCAACTCATTATTCAACCTCCTA 58.884 41.667 0.00 0.00 0.00 2.94
3402 10352 5.300286 CCTAGATTCAATTACCCTGCTTTGG 59.700 44.000 0.00 0.00 0.00 3.28
3407 10357 6.732896 TTCAATTACCCTGCTTTGGTTAAA 57.267 33.333 0.00 0.00 37.31 1.52
3422 10372 3.075283 TGGTTAAAGATCTTTGGCTCCCA 59.925 43.478 27.37 20.67 34.23 4.37
3424 10374 2.521547 AAAGATCTTTGGCTCCCAGG 57.478 50.000 19.86 0.00 33.81 4.45
3425 10375 1.376649 AAGATCTTTGGCTCCCAGGT 58.623 50.000 0.88 0.00 33.81 4.00
3455 10405 1.429463 GAACAACGCTCCGATTCACT 58.571 50.000 0.00 0.00 0.00 3.41
3461 10411 1.021202 CGCTCCGATTCACTCTCTCT 58.979 55.000 0.00 0.00 0.00 3.10
3463 10413 2.540769 CGCTCCGATTCACTCTCTCTTC 60.541 54.545 0.00 0.00 0.00 2.87
3501 10451 6.313164 GCCTCTACCATTACTCAAACAACTAC 59.687 42.308 0.00 0.00 0.00 2.73
3521 10471 9.725019 CAACTACTATTCATGATAAATGCCCTA 57.275 33.333 0.00 0.00 0.00 3.53
3562 10512 7.924541 ACCTTACTCCTAATGGAATTTGTACA 58.075 34.615 0.00 0.00 42.66 2.90
3570 10520 9.928618 TCCTAATGGAATTTGTACATCCAAATA 57.071 29.630 18.23 13.61 45.75 1.40
3626 10576 4.581309 TCCAAGAAATGCTCCTTCTCAT 57.419 40.909 0.00 0.00 31.85 2.90
3657 10607 9.368674 CATTATTTCAATATTCACAACAAGCCA 57.631 29.630 0.00 0.00 0.00 4.75
3661 10611 6.647334 TCAATATTCACAACAAGCCAGAAA 57.353 33.333 0.00 0.00 0.00 2.52
3672 10622 9.294030 CACAACAAGCCAGAAAATAATCTATTC 57.706 33.333 0.00 0.00 0.00 1.75
3706 10656 4.574599 ATTCCAAGTTGTCTGTGAAAGC 57.425 40.909 1.45 0.00 0.00 3.51
3729 10679 2.443957 CTTGCAGTTGGTTCGTCGCC 62.444 60.000 0.00 0.00 0.00 5.54
3736 10686 0.390124 TTGGTTCGTCGCCTAACTGT 59.610 50.000 0.00 0.00 0.00 3.55
3737 10687 0.319211 TGGTTCGTCGCCTAACTGTG 60.319 55.000 0.00 0.00 0.00 3.66
3759 10709 0.323451 GTCCCTTGATGACCAACCCC 60.323 60.000 0.00 0.00 0.00 4.95
3794 10744 3.726291 ACAACCAGAAACAATTTCCCG 57.274 42.857 0.00 0.00 40.54 5.14
3806 10756 5.529581 ACAATTTCCCGTCAAATGTTTCT 57.470 34.783 0.00 0.00 0.00 2.52
3808 10758 3.889196 TTTCCCGTCAAATGTTTCTCG 57.111 42.857 0.00 0.00 0.00 4.04
3822 10772 8.926710 CAAATGTTTCTCGACTAGTTTATGTCT 58.073 33.333 0.00 0.00 0.00 3.41
3824 10774 7.869016 TGTTTCTCGACTAGTTTATGTCTTG 57.131 36.000 0.00 0.00 0.00 3.02
3829 10779 7.481642 TCTCGACTAGTTTATGTCTTGATTCC 58.518 38.462 0.00 0.00 0.00 3.01
3830 10780 7.339721 TCTCGACTAGTTTATGTCTTGATTCCT 59.660 37.037 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 2.359107 ACATGGCGTGCTCCACAG 60.359 61.111 6.62 0.00 39.25 3.66
17 18 2.358615 GACATGGCGTGCTCCACA 60.359 61.111 6.62 0.00 39.25 4.17
18 19 2.358615 TGACATGGCGTGCTCCAC 60.359 61.111 6.62 0.00 39.25 4.02
19 20 2.358615 GTGACATGGCGTGCTCCA 60.359 61.111 6.62 0.00 40.97 3.86
20 21 3.127533 GGTGACATGGCGTGCTCC 61.128 66.667 6.62 6.55 0.00 4.70
21 22 3.127533 GGGTGACATGGCGTGCTC 61.128 66.667 6.62 4.61 0.00 4.26
22 23 4.722700 GGGGTGACATGGCGTGCT 62.723 66.667 6.62 0.00 0.00 4.40
24 25 3.055719 GTGGGGTGACATGGCGTG 61.056 66.667 4.87 4.87 0.00 5.34
27 28 2.305607 TAGGGTGGGGTGACATGGC 61.306 63.158 0.00 0.00 0.00 4.40
28 29 1.607612 GTAGGGTGGGGTGACATGG 59.392 63.158 0.00 0.00 0.00 3.66
29 30 1.607612 GGTAGGGTGGGGTGACATG 59.392 63.158 0.00 0.00 0.00 3.21
30 31 1.993391 CGGTAGGGTGGGGTGACAT 60.993 63.158 0.00 0.00 0.00 3.06
31 32 2.605295 CGGTAGGGTGGGGTGACA 60.605 66.667 0.00 0.00 0.00 3.58
32 33 4.091939 GCGGTAGGGTGGGGTGAC 62.092 72.222 0.00 0.00 0.00 3.67
34 35 4.096003 CTGCGGTAGGGTGGGGTG 62.096 72.222 0.00 0.00 0.00 4.61
38 39 4.143333 CGGACTGCGGTAGGGTGG 62.143 72.222 0.00 0.00 0.00 4.61
40 41 3.379445 CACGGACTGCGGTAGGGT 61.379 66.667 0.00 0.00 0.00 4.34
41 42 3.379445 ACACGGACTGCGGTAGGG 61.379 66.667 0.00 0.00 0.00 3.53
42 43 2.126071 CACACGGACTGCGGTAGG 60.126 66.667 0.00 0.00 0.00 3.18
43 44 2.126071 CCACACGGACTGCGGTAG 60.126 66.667 0.00 0.00 0.00 3.18
48 49 2.672996 AATGGCCACACGGACTGC 60.673 61.111 8.16 0.00 43.17 4.40
49 50 0.677731 ATGAATGGCCACACGGACTG 60.678 55.000 8.16 0.00 43.17 3.51
50 51 0.392998 GATGAATGGCCACACGGACT 60.393 55.000 8.16 0.00 43.17 3.85
51 52 1.376609 GGATGAATGGCCACACGGAC 61.377 60.000 8.16 0.00 42.99 4.79
52 53 1.077787 GGATGAATGGCCACACGGA 60.078 57.895 8.16 0.00 0.00 4.69
53 54 0.680921 AAGGATGAATGGCCACACGG 60.681 55.000 8.16 0.00 0.00 4.94
55 56 1.747355 CAGAAGGATGAATGGCCACAC 59.253 52.381 8.16 5.69 0.00 3.82
57 58 0.743097 GCAGAAGGATGAATGGCCAC 59.257 55.000 8.16 0.00 0.00 5.01
58 59 0.627451 AGCAGAAGGATGAATGGCCA 59.373 50.000 8.56 8.56 0.00 5.36
59 60 1.680207 GAAGCAGAAGGATGAATGGCC 59.320 52.381 0.00 0.00 0.00 5.36
60 61 2.652590 AGAAGCAGAAGGATGAATGGC 58.347 47.619 0.00 0.00 0.00 4.40
61 62 5.033589 AGTAGAAGCAGAAGGATGAATGG 57.966 43.478 0.00 0.00 0.00 3.16
63 64 5.163322 CCAGAGTAGAAGCAGAAGGATGAAT 60.163 44.000 0.00 0.00 0.00 2.57
65 66 3.703556 CCAGAGTAGAAGCAGAAGGATGA 59.296 47.826 0.00 0.00 0.00 2.92
66 67 3.703556 TCCAGAGTAGAAGCAGAAGGATG 59.296 47.826 0.00 0.00 0.00 3.51
67 68 3.987745 TCCAGAGTAGAAGCAGAAGGAT 58.012 45.455 0.00 0.00 0.00 3.24
68 69 3.458044 TCCAGAGTAGAAGCAGAAGGA 57.542 47.619 0.00 0.00 0.00 3.36
69 70 4.543590 TTTCCAGAGTAGAAGCAGAAGG 57.456 45.455 0.00 0.00 0.00 3.46
71 72 6.207417 CCAAATTTTCCAGAGTAGAAGCAGAA 59.793 38.462 0.00 0.00 0.00 3.02
72 73 5.707298 CCAAATTTTCCAGAGTAGAAGCAGA 59.293 40.000 0.00 0.00 0.00 4.26
73 74 5.105997 CCCAAATTTTCCAGAGTAGAAGCAG 60.106 44.000 0.00 0.00 0.00 4.24
74 75 4.766891 CCCAAATTTTCCAGAGTAGAAGCA 59.233 41.667 0.00 0.00 0.00 3.91
75 76 5.010282 TCCCAAATTTTCCAGAGTAGAAGC 58.990 41.667 0.00 0.00 0.00 3.86
77 78 5.418840 GCATCCCAAATTTTCCAGAGTAGAA 59.581 40.000 0.00 0.00 0.00 2.10
78 79 4.949856 GCATCCCAAATTTTCCAGAGTAGA 59.050 41.667 0.00 0.00 0.00 2.59
81 82 3.509442 TGCATCCCAAATTTTCCAGAGT 58.491 40.909 0.00 0.00 0.00 3.24
82 83 4.501071 CTTGCATCCCAAATTTTCCAGAG 58.499 43.478 0.00 0.00 31.94 3.35
84 85 3.261390 TCCTTGCATCCCAAATTTTCCAG 59.739 43.478 0.00 0.00 31.94 3.86
86 87 3.979101 TCCTTGCATCCCAAATTTTCC 57.021 42.857 0.00 0.00 31.94 3.13
87 88 5.806366 CATTCCTTGCATCCCAAATTTTC 57.194 39.130 0.00 0.00 31.94 2.29
101 102 4.774124 TCTGAAGGTCATAGCATTCCTTG 58.226 43.478 0.00 0.00 39.91 3.61
103 104 3.390639 CCTCTGAAGGTCATAGCATTCCT 59.609 47.826 0.00 0.00 37.94 3.36
104 105 3.495806 CCCTCTGAAGGTCATAGCATTCC 60.496 52.174 0.00 0.00 41.59 3.01
105 106 3.495806 CCCCTCTGAAGGTCATAGCATTC 60.496 52.174 0.00 0.00 41.59 2.67
109 110 1.501582 ACCCCTCTGAAGGTCATAGC 58.498 55.000 0.00 0.00 41.59 2.97
110 111 4.141688 GGTTAACCCCTCTGAAGGTCATAG 60.142 50.000 14.16 0.00 41.59 2.23
111 112 3.778629 GGTTAACCCCTCTGAAGGTCATA 59.221 47.826 14.16 0.00 41.59 2.15
114 115 1.982958 TGGTTAACCCCTCTGAAGGTC 59.017 52.381 21.97 0.00 41.59 3.85
116 117 3.154710 GTTTGGTTAACCCCTCTGAAGG 58.845 50.000 21.97 0.00 42.95 3.46
127 128 3.639561 ACATCAAGTGGGGTTTGGTTAAC 59.360 43.478 0.00 0.00 35.94 2.01
128 129 3.917300 ACATCAAGTGGGGTTTGGTTAA 58.083 40.909 0.00 0.00 0.00 2.01
129 130 3.603965 ACATCAAGTGGGGTTTGGTTA 57.396 42.857 0.00 0.00 0.00 2.85
131 132 3.603965 TTACATCAAGTGGGGTTTGGT 57.396 42.857 0.00 0.00 0.00 3.67
132 133 5.127031 CCTAATTACATCAAGTGGGGTTTGG 59.873 44.000 0.00 0.00 29.84 3.28
133 134 5.127031 CCCTAATTACATCAAGTGGGGTTTG 59.873 44.000 0.00 0.00 45.33 2.93
134 135 5.269189 CCCTAATTACATCAAGTGGGGTTT 58.731 41.667 0.00 0.00 45.33 3.27
136 137 4.519906 CCCTAATTACATCAAGTGGGGT 57.480 45.455 0.00 0.00 45.33 4.95
138 139 3.885297 CTGCCCTAATTACATCAAGTGGG 59.115 47.826 0.00 0.00 33.01 4.61
139 140 4.526970 ACTGCCCTAATTACATCAAGTGG 58.473 43.478 0.00 0.00 0.00 4.00
142 143 6.294473 AGATGACTGCCCTAATTACATCAAG 58.706 40.000 0.00 0.00 36.26 3.02
143 144 6.252599 AGATGACTGCCCTAATTACATCAA 57.747 37.500 0.00 0.00 36.26 2.57
145 146 5.241662 GGAGATGACTGCCCTAATTACATC 58.758 45.833 0.00 0.00 34.73 3.06
146 147 4.262635 CGGAGATGACTGCCCTAATTACAT 60.263 45.833 0.00 0.00 0.00 2.29
148 149 3.321111 TCGGAGATGACTGCCCTAATTAC 59.679 47.826 0.00 0.00 0.00 1.89
151 152 1.689273 GTCGGAGATGACTGCCCTAAT 59.311 52.381 0.00 0.00 40.67 1.73
152 153 1.112113 GTCGGAGATGACTGCCCTAA 58.888 55.000 0.00 0.00 40.67 2.69
153 154 0.755698 GGTCGGAGATGACTGCCCTA 60.756 60.000 0.00 0.00 40.67 3.53
154 155 2.060980 GGTCGGAGATGACTGCCCT 61.061 63.158 0.00 0.00 40.67 5.19
156 157 1.439644 GAGGTCGGAGATGACTGCC 59.560 63.158 0.00 0.00 40.67 4.85
158 159 1.064946 GCGAGGTCGGAGATGACTG 59.935 63.158 0.89 0.00 40.67 3.51
160 161 1.098712 AGAGCGAGGTCGGAGATGAC 61.099 60.000 0.89 0.00 40.67 3.06
161 162 0.816018 GAGAGCGAGGTCGGAGATGA 60.816 60.000 0.89 0.00 40.67 2.92
162 163 0.817634 AGAGAGCGAGGTCGGAGATG 60.818 60.000 0.89 0.00 40.67 2.90
165 166 2.477176 CCAGAGAGCGAGGTCGGAG 61.477 68.421 0.89 0.00 40.23 4.63
166 167 2.438614 CCAGAGAGCGAGGTCGGA 60.439 66.667 0.89 0.00 40.23 4.55
167 168 2.752238 ACCAGAGAGCGAGGTCGG 60.752 66.667 0.89 0.00 40.23 4.79
168 169 2.795297 GACCAGAGAGCGAGGTCG 59.205 66.667 0.00 0.00 42.02 4.79
171 172 1.214062 GTGTGACCAGAGAGCGAGG 59.786 63.158 0.00 0.00 0.00 4.63
172 173 1.214062 GGTGTGACCAGAGAGCGAG 59.786 63.158 0.00 0.00 38.42 5.03
173 174 2.626780 CGGTGTGACCAGAGAGCGA 61.627 63.158 0.00 0.00 38.47 4.93
174 175 2.126307 CGGTGTGACCAGAGAGCG 60.126 66.667 0.00 0.00 38.47 5.03
175 176 2.433318 GCGGTGTGACCAGAGAGC 60.433 66.667 0.00 0.00 38.47 4.09
176 177 2.219325 GAGGCGGTGTGACCAGAGAG 62.219 65.000 0.00 0.00 38.47 3.20
177 178 2.203640 AGGCGGTGTGACCAGAGA 60.204 61.111 0.00 0.00 38.47 3.10
179 180 2.203640 AGAGGCGGTGTGACCAGA 60.204 61.111 0.00 0.00 38.47 3.86
180 181 2.099652 TTGAGAGGCGGTGTGACCAG 62.100 60.000 0.00 0.00 38.47 4.00
181 182 1.691195 TTTGAGAGGCGGTGTGACCA 61.691 55.000 0.00 0.00 38.47 4.02
182 183 0.951040 CTTTGAGAGGCGGTGTGACC 60.951 60.000 0.00 0.00 34.05 4.02
183 184 0.951040 CCTTTGAGAGGCGGTGTGAC 60.951 60.000 0.00 0.00 39.09 3.67
184 185 1.371183 CCTTTGAGAGGCGGTGTGA 59.629 57.895 0.00 0.00 39.09 3.58
185 186 3.972227 CCTTTGAGAGGCGGTGTG 58.028 61.111 0.00 0.00 39.09 3.82
194 195 4.398044 GGATTATTTGTTCCGCCTTTGAGA 59.602 41.667 0.00 0.00 0.00 3.27
196 197 4.082845 TGGATTATTTGTTCCGCCTTTGA 58.917 39.130 0.00 0.00 0.00 2.69
197 198 4.448537 TGGATTATTTGTTCCGCCTTTG 57.551 40.909 0.00 0.00 0.00 2.77
199 200 3.181476 GCATGGATTATTTGTTCCGCCTT 60.181 43.478 0.00 0.00 0.00 4.35
201 202 2.545742 GGCATGGATTATTTGTTCCGCC 60.546 50.000 0.00 0.00 0.00 6.13
202 203 2.742774 GGCATGGATTATTTGTTCCGC 58.257 47.619 0.00 0.00 0.00 5.54
203 204 2.287547 CCGGCATGGATTATTTGTTCCG 60.288 50.000 0.00 0.00 42.00 4.30
204 205 2.693074 ACCGGCATGGATTATTTGTTCC 59.307 45.455 0.00 0.00 42.00 3.62
205 206 3.632145 AGACCGGCATGGATTATTTGTTC 59.368 43.478 0.00 0.00 42.00 3.18
207 208 2.951642 CAGACCGGCATGGATTATTTGT 59.048 45.455 0.00 0.00 42.00 2.83
209 210 2.951642 CACAGACCGGCATGGATTATTT 59.048 45.455 0.00 0.00 42.00 1.40
210 211 2.575532 CACAGACCGGCATGGATTATT 58.424 47.619 0.00 0.00 42.00 1.40
212 213 0.180171 CCACAGACCGGCATGGATTA 59.820 55.000 0.00 0.00 42.00 1.75
214 215 2.591753 CCACAGACCGGCATGGAT 59.408 61.111 0.00 0.00 42.00 3.41
221 222 3.622060 AAATCCCGCCACAGACCGG 62.622 63.158 0.00 0.00 43.97 5.28
222 223 2.046314 AAATCCCGCCACAGACCG 60.046 61.111 0.00 0.00 0.00 4.79
223 224 0.322546 AAGAAATCCCGCCACAGACC 60.323 55.000 0.00 0.00 0.00 3.85
225 226 0.984230 AGAAGAAATCCCGCCACAGA 59.016 50.000 0.00 0.00 0.00 3.41
226 227 1.373570 GAGAAGAAATCCCGCCACAG 58.626 55.000 0.00 0.00 0.00 3.66
227 228 0.035439 GGAGAAGAAATCCCGCCACA 60.035 55.000 0.00 0.00 0.00 4.17
228 229 0.253327 AGGAGAAGAAATCCCGCCAC 59.747 55.000 0.00 0.00 37.57 5.01
229 230 0.541863 GAGGAGAAGAAATCCCGCCA 59.458 55.000 0.00 0.00 37.57 5.69
230 231 0.833949 AGAGGAGAAGAAATCCCGCC 59.166 55.000 0.00 0.00 37.57 6.13
231 232 1.537135 CGAGAGGAGAAGAAATCCCGC 60.537 57.143 0.00 0.00 37.57 6.13
232 233 1.751924 ACGAGAGGAGAAGAAATCCCG 59.248 52.381 0.00 0.00 37.57 5.14
233 234 3.028130 AGACGAGAGGAGAAGAAATCCC 58.972 50.000 0.00 0.00 37.57 3.85
236 237 5.265989 AGGTAAGACGAGAGGAGAAGAAAT 58.734 41.667 0.00 0.00 0.00 2.17
237 238 4.664392 AGGTAAGACGAGAGGAGAAGAAA 58.336 43.478 0.00 0.00 0.00 2.52
238 239 4.304048 AGGTAAGACGAGAGGAGAAGAA 57.696 45.455 0.00 0.00 0.00 2.52
239 240 5.432680 TTAGGTAAGACGAGAGGAGAAGA 57.567 43.478 0.00 0.00 0.00 2.87
240 241 6.151480 AGTTTTAGGTAAGACGAGAGGAGAAG 59.849 42.308 0.00 0.00 0.00 2.85
241 242 6.008960 AGTTTTAGGTAAGACGAGAGGAGAA 58.991 40.000 0.00 0.00 0.00 2.87
242 243 5.568392 AGTTTTAGGTAAGACGAGAGGAGA 58.432 41.667 0.00 0.00 0.00 3.71
243 244 5.900865 AGTTTTAGGTAAGACGAGAGGAG 57.099 43.478 0.00 0.00 0.00 3.69
244 245 6.041296 ACAAAGTTTTAGGTAAGACGAGAGGA 59.959 38.462 0.00 0.00 0.00 3.71
245 246 6.221659 ACAAAGTTTTAGGTAAGACGAGAGG 58.778 40.000 0.00 0.00 0.00 3.69
247 248 5.916883 CGACAAAGTTTTAGGTAAGACGAGA 59.083 40.000 0.00 0.00 0.00 4.04
248 249 5.916883 TCGACAAAGTTTTAGGTAAGACGAG 59.083 40.000 0.00 0.00 0.00 4.18
249 250 5.830912 TCGACAAAGTTTTAGGTAAGACGA 58.169 37.500 0.00 0.00 0.00 4.20
250 251 5.689068 ACTCGACAAAGTTTTAGGTAAGACG 59.311 40.000 0.00 0.00 0.00 4.18
251 252 7.649306 TGTACTCGACAAAGTTTTAGGTAAGAC 59.351 37.037 0.00 0.00 34.15 3.01
252 253 7.649306 GTGTACTCGACAAAGTTTTAGGTAAGA 59.351 37.037 0.00 0.00 40.66 2.10
255 256 7.042797 AGTGTACTCGACAAAGTTTTAGGTA 57.957 36.000 0.00 0.00 40.66 3.08
256 257 5.910614 AGTGTACTCGACAAAGTTTTAGGT 58.089 37.500 0.00 0.00 40.66 3.08
258 259 8.995906 CAAAAAGTGTACTCGACAAAGTTTTAG 58.004 33.333 0.00 0.00 40.66 1.85
260 261 7.586747 TCAAAAAGTGTACTCGACAAAGTTTT 58.413 30.769 0.00 0.00 40.66 2.43
261 262 7.136289 TCAAAAAGTGTACTCGACAAAGTTT 57.864 32.000 0.00 0.00 40.66 2.66
262 263 6.730960 TCAAAAAGTGTACTCGACAAAGTT 57.269 33.333 0.00 0.00 40.66 2.66
263 264 6.730960 TTCAAAAAGTGTACTCGACAAAGT 57.269 33.333 0.00 0.00 40.66 2.66
275 276 8.531146 CCCACCTGAATATATTTCAAAAAGTGT 58.469 33.333 0.00 0.00 0.00 3.55
276 277 8.748412 TCCCACCTGAATATATTTCAAAAAGTG 58.252 33.333 0.00 2.14 0.00 3.16
277 278 8.893563 TCCCACCTGAATATATTTCAAAAAGT 57.106 30.769 0.00 0.00 0.00 2.66
279 280 8.257306 GCTTCCCACCTGAATATATTTCAAAAA 58.743 33.333 0.00 0.00 0.00 1.94
280 281 7.147742 GGCTTCCCACCTGAATATATTTCAAAA 60.148 37.037 0.00 0.00 0.00 2.44
281 282 6.323739 GGCTTCCCACCTGAATATATTTCAAA 59.676 38.462 0.00 0.00 0.00 2.69
282 283 5.833131 GGCTTCCCACCTGAATATATTTCAA 59.167 40.000 0.00 0.00 0.00 2.69
283 284 5.134339 AGGCTTCCCACCTGAATATATTTCA 59.866 40.000 0.00 0.00 35.72 2.69
284 285 5.635120 AGGCTTCCCACCTGAATATATTTC 58.365 41.667 0.00 0.00 35.72 2.17
286 287 5.669798 AAGGCTTCCCACCTGAATATATT 57.330 39.130 0.00 0.00 37.67 1.28
288 289 4.141251 GGAAAGGCTTCCCACCTGAATATA 60.141 45.833 0.00 0.00 44.91 0.86
289 290 3.373110 GGAAAGGCTTCCCACCTGAATAT 60.373 47.826 0.00 0.00 44.91 1.28
290 291 2.025321 GGAAAGGCTTCCCACCTGAATA 60.025 50.000 0.00 0.00 44.91 1.75
294 295 4.423231 GGAAAGGCTTCCCACCTG 57.577 61.111 0.00 0.00 44.91 4.00
311 312 2.065899 TTTGAAACTGTCACTGGGGG 57.934 50.000 0.00 0.00 35.39 5.40
337 338 6.663734 AGGCAAGTATAGGCTAGATGTTTTT 58.336 36.000 0.00 0.00 40.43 1.94
338 339 6.100424 AGAGGCAAGTATAGGCTAGATGTTTT 59.900 38.462 0.00 0.00 42.47 2.43
339 340 5.604650 AGAGGCAAGTATAGGCTAGATGTTT 59.395 40.000 0.00 0.00 42.47 2.83
466 2622 7.775093 ACTCTAGATAAAATAACAATGCTGGCA 59.225 33.333 0.00 0.00 0.00 4.92
487 2646 9.986157 TGGAGGTAGACTAATTAGAAAACTCTA 57.014 33.333 19.38 14.18 0.00 2.43
539 2702 4.968719 TGAGCTGGAGGTGGAGAATTAATA 59.031 41.667 0.00 0.00 0.00 0.98
700 3120 2.739932 CGAAGAGGTAGGAGCAACATGG 60.740 54.545 0.00 0.00 0.00 3.66
711 3131 1.473278 GGAGTGGTGACGAAGAGGTAG 59.527 57.143 0.00 0.00 0.00 3.18
729 3149 4.164604 GGGTAACATGTATAACTGGGTGGA 59.835 45.833 0.00 0.00 39.74 4.02
771 3261 0.168568 GCCGGATCTAGCTAGTACGC 59.831 60.000 20.10 11.77 0.00 4.42
791 4233 6.624352 AATCAATGATTACTGGATCCAACG 57.376 37.500 17.00 7.73 29.72 4.10
829 4273 1.337821 GGTTACGCTTGTCTGACTCG 58.662 55.000 9.51 11.70 0.00 4.18
911 4770 9.981114 TCGCTTTTATAAGAACTGATCATCATA 57.019 29.630 0.00 0.00 32.92 2.15
931 4790 0.606673 GCTCCTTTGGTCCTCGCTTT 60.607 55.000 0.00 0.00 0.00 3.51
934 4793 1.743252 CTGCTCCTTTGGTCCTCGC 60.743 63.158 0.00 0.00 0.00 5.03
942 4801 1.163554 GTGCTTCTCCTGCTCCTTTG 58.836 55.000 0.00 0.00 0.00 2.77
969 4829 4.974645 TCTGCTTTCTCTCTGGGTTTAA 57.025 40.909 0.00 0.00 0.00 1.52
1013 4873 2.611224 GCAAGGGACAAGAGCATTTTGG 60.611 50.000 0.00 0.00 0.00 3.28
1029 4889 1.915614 GCACGACACAGATGGCAAGG 61.916 60.000 0.00 0.00 30.51 3.61
1108 4977 0.685097 TGGAGCGCCTTCTTGTAGTT 59.315 50.000 8.34 0.00 34.31 2.24
1131 5000 2.054232 CCTCGAAGTACAGGAGGCTA 57.946 55.000 12.20 0.00 40.76 3.93
1140 5009 2.938539 ATCGCTGCGCCTCGAAGTAC 62.939 60.000 21.60 0.00 38.28 2.73
1266 5135 1.155424 GGCCGAACTTGACGTTGTCA 61.155 55.000 0.00 0.00 41.09 3.58
1289 5158 1.666553 GTGACCGTGAACGCCATCA 60.667 57.895 0.00 0.00 38.18 3.07
1398 5267 1.275010 TGCGCCTTGATGAAGTAGTCA 59.725 47.619 4.18 0.00 41.67 3.41
1515 5679 3.353600 TCGCGGTCGACCTTGTAA 58.646 55.556 30.92 10.14 40.21 2.41
1994 6886 2.036256 ATGCTCACCTTGGTGGCC 59.964 61.111 18.45 0.00 40.22 5.36
2812 7979 0.881118 GCTTTTCTTCGTGATGGCCA 59.119 50.000 8.56 8.56 0.00 5.36
2845 8444 9.427821 ACTAATCTTAGAAGAGCCATCTTAGAA 57.572 33.333 12.02 0.00 45.98 2.10
2846 8445 8.855110 CACTAATCTTAGAAGAGCCATCTTAGA 58.145 37.037 12.02 3.24 45.98 2.10
2847 8446 8.637986 ACACTAATCTTAGAAGAGCCATCTTAG 58.362 37.037 4.03 3.17 45.98 2.18
2848 8447 8.417106 CACACTAATCTTAGAAGAGCCATCTTA 58.583 37.037 4.03 0.00 45.98 2.10
2850 8449 6.685116 GCACACTAATCTTAGAAGAGCCATCT 60.685 42.308 4.03 0.00 38.66 2.90
2851 8450 5.465056 GCACACTAATCTTAGAAGAGCCATC 59.535 44.000 4.03 0.00 38.66 3.51
2852 8451 5.104776 TGCACACTAATCTTAGAAGAGCCAT 60.105 40.000 4.03 0.00 38.66 4.40
2853 8452 4.222810 TGCACACTAATCTTAGAAGAGCCA 59.777 41.667 4.03 0.00 38.66 4.75
2854 8453 4.759782 TGCACACTAATCTTAGAAGAGCC 58.240 43.478 4.03 0.00 38.66 4.70
2855 8454 5.415221 ACTGCACACTAATCTTAGAAGAGC 58.585 41.667 4.03 6.75 38.66 4.09
2856 8455 7.897575 AAACTGCACACTAATCTTAGAAGAG 57.102 36.000 4.03 0.00 38.66 2.85
2857 8456 9.204570 GTAAAACTGCACACTAATCTTAGAAGA 57.795 33.333 4.03 0.00 39.78 2.87
2858 8457 8.988934 TGTAAAACTGCACACTAATCTTAGAAG 58.011 33.333 4.03 0.00 34.84 2.85
2905 8506 4.261280 CCAACAGTTAAACTAAACCCACGG 60.261 45.833 0.00 0.00 0.00 4.94
2906 8507 4.575645 TCCAACAGTTAAACTAAACCCACG 59.424 41.667 0.00 0.00 0.00 4.94
2907 8508 5.591472 ACTCCAACAGTTAAACTAAACCCAC 59.409 40.000 0.00 0.00 26.56 4.61
2909 8510 5.591472 ACACTCCAACAGTTAAACTAAACCC 59.409 40.000 0.00 0.00 30.26 4.11
2941 8553 6.326583 ACTCTGCACTCTCTATACTCTCTACT 59.673 42.308 0.00 0.00 0.00 2.57
2950 8562 3.722627 ACCCCTACTCTGCACTCTCTATA 59.277 47.826 0.00 0.00 0.00 1.31
2951 8563 2.516277 ACCCCTACTCTGCACTCTCTAT 59.484 50.000 0.00 0.00 0.00 1.98
3000 8612 4.281941 TGTAGCCATGCAATCTAGGAGTAG 59.718 45.833 0.00 0.00 0.00 2.57
3001 8613 4.223144 TGTAGCCATGCAATCTAGGAGTA 58.777 43.478 0.00 0.00 0.00 2.59
3002 8614 3.041211 TGTAGCCATGCAATCTAGGAGT 58.959 45.455 0.00 0.00 0.00 3.85
3003 8615 3.758755 TGTAGCCATGCAATCTAGGAG 57.241 47.619 0.00 0.00 0.00 3.69
3004 8616 4.454678 CTTTGTAGCCATGCAATCTAGGA 58.545 43.478 0.00 0.00 30.67 2.94
3005 8617 3.567164 CCTTTGTAGCCATGCAATCTAGG 59.433 47.826 0.00 0.00 30.67 3.02
3006 8618 3.004106 GCCTTTGTAGCCATGCAATCTAG 59.996 47.826 0.00 0.00 30.67 2.43
3007 8619 2.951642 GCCTTTGTAGCCATGCAATCTA 59.048 45.455 0.00 0.00 30.67 1.98
3021 8633 1.275010 CCTTAAAATGCCGGCCTTTGT 59.725 47.619 27.23 17.07 0.00 2.83
3024 8636 0.894835 CACCTTAAAATGCCGGCCTT 59.105 50.000 26.77 18.94 0.00 4.35
3061 9791 6.091577 TCGAAACAATAGCGAGCTGATAAAAA 59.908 34.615 7.99 0.00 0.00 1.94
3062 9792 5.579119 TCGAAACAATAGCGAGCTGATAAAA 59.421 36.000 7.99 0.00 0.00 1.52
3063 9793 5.106442 TCGAAACAATAGCGAGCTGATAAA 58.894 37.500 7.99 0.00 0.00 1.40
3068 9798 3.933155 ATTCGAAACAATAGCGAGCTG 57.067 42.857 0.00 0.00 35.31 4.24
3071 9801 7.509797 TGCATATAATTCGAAACAATAGCGAG 58.490 34.615 0.00 0.00 35.31 5.03
3072 9802 7.414814 TGCATATAATTCGAAACAATAGCGA 57.585 32.000 0.00 0.00 0.00 4.93
3073 9803 6.247165 GCTGCATATAATTCGAAACAATAGCG 59.753 38.462 0.00 2.02 0.00 4.26
3074 9804 7.077605 TGCTGCATATAATTCGAAACAATAGC 58.922 34.615 0.00 3.99 0.00 2.97
3075 9805 9.449550 TTTGCTGCATATAATTCGAAACAATAG 57.550 29.630 1.84 0.00 0.00 1.73
3079 9809 7.087007 TGTTTTGCTGCATATAATTCGAAACA 58.913 30.769 15.44 15.44 36.22 2.83
3084 9814 6.414694 ACGATTGTTTTGCTGCATATAATTCG 59.585 34.615 1.84 11.40 0.00 3.34
3085 9815 7.684062 ACGATTGTTTTGCTGCATATAATTC 57.316 32.000 1.84 0.00 0.00 2.17
3086 9816 9.579768 TTAACGATTGTTTTGCTGCATATAATT 57.420 25.926 1.84 0.00 39.54 1.40
3087 9817 9.579768 TTTAACGATTGTTTTGCTGCATATAAT 57.420 25.926 1.84 5.13 39.54 1.28
3088 9818 8.855279 GTTTAACGATTGTTTTGCTGCATATAA 58.145 29.630 1.84 0.00 39.54 0.98
3090 9820 6.865726 TGTTTAACGATTGTTTTGCTGCATAT 59.134 30.769 1.84 0.00 39.54 1.78
3091 9821 6.209361 TGTTTAACGATTGTTTTGCTGCATA 58.791 32.000 1.84 0.00 39.54 3.14
3093 9823 4.424626 TGTTTAACGATTGTTTTGCTGCA 58.575 34.783 3.03 0.00 39.54 4.41
3094 9824 5.382573 TTGTTTAACGATTGTTTTGCTGC 57.617 34.783 3.03 0.00 39.54 5.25
3095 9825 5.895889 GCTTTGTTTAACGATTGTTTTGCTG 59.104 36.000 3.03 0.00 39.54 4.41
3098 9828 5.522097 AGGGCTTTGTTTAACGATTGTTTTG 59.478 36.000 3.03 0.00 39.54 2.44
3099 9829 5.666462 AGGGCTTTGTTTAACGATTGTTTT 58.334 33.333 3.03 0.00 39.54 2.43
3100 9830 5.270893 AGGGCTTTGTTTAACGATTGTTT 57.729 34.783 3.03 0.00 39.54 2.83
3101 9831 4.929819 AGGGCTTTGTTTAACGATTGTT 57.070 36.364 3.29 3.29 42.19 2.83
3102 9832 5.067954 AGTAGGGCTTTGTTTAACGATTGT 58.932 37.500 0.00 0.00 0.00 2.71
3103 9833 5.622770 AGTAGGGCTTTGTTTAACGATTG 57.377 39.130 0.00 0.00 0.00 2.67
3104 9834 6.704310 TCTAGTAGGGCTTTGTTTAACGATT 58.296 36.000 0.00 0.00 0.00 3.34
3105 9835 6.290294 TCTAGTAGGGCTTTGTTTAACGAT 57.710 37.500 0.00 0.00 0.00 3.73
3108 9838 8.027189 CCATTTTCTAGTAGGGCTTTGTTTAAC 58.973 37.037 0.00 0.00 0.00 2.01
3109 9839 7.945664 TCCATTTTCTAGTAGGGCTTTGTTTAA 59.054 33.333 0.00 0.00 0.00 1.52
3110 9840 7.392393 GTCCATTTTCTAGTAGGGCTTTGTTTA 59.608 37.037 0.00 0.00 0.00 2.01
3112 9842 5.710567 GTCCATTTTCTAGTAGGGCTTTGTT 59.289 40.000 0.00 0.00 0.00 2.83
3113 9843 5.014228 AGTCCATTTTCTAGTAGGGCTTTGT 59.986 40.000 0.00 0.00 27.86 2.83
3114 9844 5.501156 AGTCCATTTTCTAGTAGGGCTTTG 58.499 41.667 0.00 0.00 27.86 2.77
3115 9845 5.339282 GGAGTCCATTTTCTAGTAGGGCTTT 60.339 44.000 3.60 0.00 33.78 3.51
3116 9846 4.164413 GGAGTCCATTTTCTAGTAGGGCTT 59.836 45.833 3.60 0.00 33.78 4.35
3117 9847 3.712218 GGAGTCCATTTTCTAGTAGGGCT 59.288 47.826 3.60 0.00 36.93 5.19
3118 9848 3.454812 TGGAGTCCATTTTCTAGTAGGGC 59.545 47.826 8.12 0.00 0.00 5.19
3119 9849 4.141688 GGTGGAGTCCATTTTCTAGTAGGG 60.142 50.000 16.67 0.00 35.28 3.53
3120 9850 4.717280 AGGTGGAGTCCATTTTCTAGTAGG 59.283 45.833 16.67 0.00 35.28 3.18
3121 9851 5.422331 TGAGGTGGAGTCCATTTTCTAGTAG 59.578 44.000 16.67 0.00 35.28 2.57
3123 9853 4.168101 TGAGGTGGAGTCCATTTTCTAGT 58.832 43.478 16.67 0.00 35.28 2.57
3126 9856 3.875369 GCATGAGGTGGAGTCCATTTTCT 60.875 47.826 16.67 10.73 35.28 2.52
3127 9857 2.424956 GCATGAGGTGGAGTCCATTTTC 59.575 50.000 16.67 13.46 35.28 2.29
3128 9858 2.450476 GCATGAGGTGGAGTCCATTTT 58.550 47.619 16.67 3.81 35.28 1.82
3130 9860 0.107508 CGCATGAGGTGGAGTCCATT 60.108 55.000 16.67 7.02 35.28 3.16
3131 9861 1.524002 CGCATGAGGTGGAGTCCAT 59.476 57.895 16.67 0.00 35.28 3.41
3132 9862 2.981302 CGCATGAGGTGGAGTCCA 59.019 61.111 8.12 8.12 0.00 4.02
3139 9869 0.246360 TAGTGTGTCCGCATGAGGTG 59.754 55.000 15.66 0.00 0.00 4.00
3140 9870 0.973632 TTAGTGTGTCCGCATGAGGT 59.026 50.000 15.66 0.00 0.00 3.85
3141 9871 2.093306 TTTAGTGTGTCCGCATGAGG 57.907 50.000 9.57 9.57 0.00 3.86
3142 9872 5.991328 AATATTTAGTGTGTCCGCATGAG 57.009 39.130 0.00 0.00 0.00 2.90
3144 9874 6.905076 GTGTTAATATTTAGTGTGTCCGCATG 59.095 38.462 0.00 0.00 0.00 4.06
3145 9875 6.237996 CGTGTTAATATTTAGTGTGTCCGCAT 60.238 38.462 0.00 0.00 0.00 4.73
3146 9876 5.062433 CGTGTTAATATTTAGTGTGTCCGCA 59.938 40.000 0.00 0.00 0.00 5.69
3147 9877 5.486706 CGTGTTAATATTTAGTGTGTCCGC 58.513 41.667 0.00 0.00 0.00 5.54
3149 9879 7.254658 CCATCCGTGTTAATATTTAGTGTGTCC 60.255 40.741 0.00 0.00 0.00 4.02
3150 9880 7.279313 ACCATCCGTGTTAATATTTAGTGTGTC 59.721 37.037 0.00 0.00 0.00 3.67
3151 9881 7.065324 CACCATCCGTGTTAATATTTAGTGTGT 59.935 37.037 0.00 0.00 37.73 3.72
3152 9882 7.406553 CACCATCCGTGTTAATATTTAGTGTG 58.593 38.462 0.00 0.00 37.73 3.82
3153 9883 6.037830 GCACCATCCGTGTTAATATTTAGTGT 59.962 38.462 0.00 0.00 44.97 3.55
3154 9884 6.427150 GCACCATCCGTGTTAATATTTAGTG 58.573 40.000 0.00 0.00 44.97 2.74
3155 9885 5.529800 GGCACCATCCGTGTTAATATTTAGT 59.470 40.000 0.00 0.00 44.97 2.24
3156 9886 5.763204 AGGCACCATCCGTGTTAATATTTAG 59.237 40.000 0.00 0.00 44.97 1.85
3157 9887 5.686753 AGGCACCATCCGTGTTAATATTTA 58.313 37.500 0.00 0.00 44.97 1.40
3158 9888 4.532834 AGGCACCATCCGTGTTAATATTT 58.467 39.130 0.00 0.00 44.97 1.40
3159 9889 4.164843 AGGCACCATCCGTGTTAATATT 57.835 40.909 0.00 0.00 44.97 1.28
3160 9890 3.857157 AGGCACCATCCGTGTTAATAT 57.143 42.857 0.00 0.00 44.97 1.28
3161 9891 3.537580 GAAGGCACCATCCGTGTTAATA 58.462 45.455 0.00 0.00 44.97 0.98
3162 9892 2.365582 GAAGGCACCATCCGTGTTAAT 58.634 47.619 0.00 0.00 44.97 1.40
3163 9893 1.612199 GGAAGGCACCATCCGTGTTAA 60.612 52.381 0.00 0.00 44.97 2.01
3164 9894 0.035820 GGAAGGCACCATCCGTGTTA 60.036 55.000 0.00 0.00 44.97 2.41
3170 9900 3.969250 TTCGCGGAAGGCACCATCC 62.969 63.158 6.13 0.64 43.84 3.51
3171 9901 2.435938 TTCGCGGAAGGCACCATC 60.436 61.111 6.13 0.00 43.84 3.51
3172 9902 2.436646 CTTCGCGGAAGGCACCAT 60.437 61.111 6.13 0.00 43.84 3.55
3173 9903 3.589654 CTCTTCGCGGAAGGCACCA 62.590 63.158 6.13 0.00 43.84 4.17
3174 9904 2.815647 CTCTTCGCGGAAGGCACC 60.816 66.667 6.13 0.00 43.84 5.01
3175 9905 2.048127 ACTCTTCGCGGAAGGCAC 60.048 61.111 6.13 0.00 43.84 5.01
3176 9906 2.214181 GAGACTCTTCGCGGAAGGCA 62.214 60.000 6.13 0.00 43.84 4.75
3177 9907 1.517475 GAGACTCTTCGCGGAAGGC 60.517 63.158 6.13 3.33 39.82 4.35
3178 9908 0.528470 AAGAGACTCTTCGCGGAAGG 59.472 55.000 12.12 5.88 39.82 3.46
3179 9909 2.255316 GAAAGAGACTCTTCGCGGAAG 58.745 52.381 17.97 9.12 35.27 3.46
3180 9910 1.067776 GGAAAGAGACTCTTCGCGGAA 60.068 52.381 17.97 0.00 35.27 4.30
3181 9911 0.526662 GGAAAGAGACTCTTCGCGGA 59.473 55.000 17.97 0.00 35.27 5.54
3183 9913 0.798771 CCGGAAAGAGACTCTTCGCG 60.799 60.000 17.97 14.54 35.27 5.87
3184 9914 0.526662 TCCGGAAAGAGACTCTTCGC 59.473 55.000 17.97 12.67 35.27 4.70
3185 9915 1.133407 CCTCCGGAAAGAGACTCTTCG 59.867 57.143 17.97 16.71 35.27 3.79
3186 9916 1.134936 GCCTCCGGAAAGAGACTCTTC 60.135 57.143 17.97 11.16 35.27 2.87
3187 9917 0.899019 GCCTCCGGAAAGAGACTCTT 59.101 55.000 12.12 12.12 38.59 2.85
3188 9918 0.040499 AGCCTCCGGAAAGAGACTCT 59.960 55.000 5.23 0.00 35.82 3.24
3189 9919 0.174617 CAGCCTCCGGAAAGAGACTC 59.825 60.000 5.23 0.00 35.82 3.36
3190 9920 1.261238 CCAGCCTCCGGAAAGAGACT 61.261 60.000 5.23 0.00 35.82 3.24
3191 9921 1.219393 CCAGCCTCCGGAAAGAGAC 59.781 63.158 5.23 0.00 35.82 3.36
3193 9923 2.586792 CCCAGCCTCCGGAAAGAG 59.413 66.667 5.23 0.00 0.00 2.85
3194 9924 3.009115 CCCCAGCCTCCGGAAAGA 61.009 66.667 5.23 0.00 0.00 2.52
3195 9925 2.426305 AAACCCCAGCCTCCGGAAAG 62.426 60.000 5.23 0.21 0.00 2.62
3197 9927 2.856988 AAACCCCAGCCTCCGGAA 60.857 61.111 5.23 0.00 0.00 4.30
3198 9928 3.327404 GAAACCCCAGCCTCCGGA 61.327 66.667 2.93 2.93 0.00 5.14
3199 9929 1.559065 TAAGAAACCCCAGCCTCCGG 61.559 60.000 0.00 0.00 0.00 5.14
3200 9930 0.326927 TTAAGAAACCCCAGCCTCCG 59.673 55.000 0.00 0.00 0.00 4.63
3202 9932 4.086457 TGATTTTAAGAAACCCCAGCCTC 58.914 43.478 0.00 0.00 0.00 4.70
3203 9933 4.126520 TGATTTTAAGAAACCCCAGCCT 57.873 40.909 0.00 0.00 0.00 4.58
3204 9934 4.141937 GGATGATTTTAAGAAACCCCAGCC 60.142 45.833 0.00 0.00 0.00 4.85
3205 9935 4.141937 GGGATGATTTTAAGAAACCCCAGC 60.142 45.833 0.00 0.00 0.00 4.85
3206 9936 5.022787 TGGGATGATTTTAAGAAACCCCAG 58.977 41.667 0.00 0.00 36.49 4.45
3207 9937 5.017093 TGGGATGATTTTAAGAAACCCCA 57.983 39.130 0.00 0.00 38.85 4.96
3209 9939 7.619965 TGATTTGGGATGATTTTAAGAAACCC 58.380 34.615 0.00 0.00 36.92 4.11
3212 9942 9.270707 AGGATGATTTGGGATGATTTTAAGAAA 57.729 29.630 0.00 0.00 0.00 2.52
3214 9944 8.843308 AAGGATGATTTGGGATGATTTTAAGA 57.157 30.769 0.00 0.00 0.00 2.10
3215 9945 9.895138 AAAAGGATGATTTGGGATGATTTTAAG 57.105 29.630 0.00 0.00 0.00 1.85
3216 9946 9.669887 CAAAAGGATGATTTGGGATGATTTTAA 57.330 29.630 0.00 0.00 34.81 1.52
3228 10175 7.995488 AGTATAGAGGACCAAAAGGATGATTTG 59.005 37.037 0.00 0.00 37.48 2.32
3235 10182 9.681062 CATTTTAAGTATAGAGGACCAAAAGGA 57.319 33.333 0.00 0.00 0.00 3.36
3251 10198 9.430623 GCTTTTAATTGGGAAGCATTTTAAGTA 57.569 29.630 13.87 0.00 43.89 2.24
3252 10199 7.390440 GGCTTTTAATTGGGAAGCATTTTAAGT 59.610 33.333 18.01 0.00 45.70 2.24
3266 10213 6.149308 GGTCAAAAGAATGGGCTTTTAATTGG 59.851 38.462 0.00 0.00 44.00 3.16
3276 10224 5.408299 GTGTAATTTGGTCAAAAGAATGGGC 59.592 40.000 0.00 0.00 33.56 5.36
3283 10231 8.661352 ATTTCCTTGTGTAATTTGGTCAAAAG 57.339 30.769 0.00 0.00 33.56 2.27
3298 10248 6.595716 ACTCCGAAGAGAAATATTTCCTTGTG 59.404 38.462 24.53 18.78 43.39 3.33
3325 10275 2.941415 GCCCATGAAGTACACCAAGGAG 60.941 54.545 9.45 0.00 0.00 3.69
3341 10291 1.377725 CGCCTGAACAGAAGCCCAT 60.378 57.895 3.19 0.00 0.00 4.00
3342 10292 2.032528 CGCCTGAACAGAAGCCCA 59.967 61.111 3.19 0.00 0.00 5.36
3354 10304 3.429085 GTTGAATAATGAGTTGCGCCTG 58.571 45.455 4.18 0.00 0.00 4.85
3359 10309 6.349300 TCTAGGAGGTTGAATAATGAGTTGC 58.651 40.000 0.00 0.00 0.00 4.17
3363 10313 9.790344 ATTGAATCTAGGAGGTTGAATAATGAG 57.210 33.333 0.00 0.00 0.00 2.90
3381 10331 4.677182 ACCAAAGCAGGGTAATTGAATCT 58.323 39.130 0.00 0.00 36.72 2.40
3402 10352 3.696548 CCTGGGAGCCAAAGATCTTTAAC 59.303 47.826 20.07 14.55 30.80 2.01
3407 10357 2.122768 CTACCTGGGAGCCAAAGATCT 58.877 52.381 0.00 0.00 30.80 2.75
3422 10372 3.314357 GCGTTGTTCCAAACTTTCTACCT 59.686 43.478 0.00 0.00 0.00 3.08
3424 10374 4.524749 GAGCGTTGTTCCAAACTTTCTAC 58.475 43.478 0.00 0.00 0.00 2.59
3425 10375 3.562557 GGAGCGTTGTTCCAAACTTTCTA 59.437 43.478 0.00 0.00 33.06 2.10
3443 10393 2.223711 GGAAGAGAGAGTGAATCGGAGC 60.224 54.545 0.00 0.00 0.00 4.70
3444 10394 3.020274 TGGAAGAGAGAGTGAATCGGAG 58.980 50.000 0.00 0.00 0.00 4.63
3447 10397 3.020274 TCCTGGAAGAGAGAGTGAATCG 58.980 50.000 0.00 0.00 34.07 3.34
3448 10398 3.181476 GCTCCTGGAAGAGAGAGTGAATC 60.181 52.174 0.00 0.00 34.45 2.52
3455 10405 0.415429 AAGGGCTCCTGGAAGAGAGA 59.585 55.000 0.00 0.00 34.45 3.10
3521 10471 5.454966 AGTAAGGTCCCAACAAAGAATGTT 58.545 37.500 0.00 0.00 45.86 2.71
3534 10484 5.648330 AATTCCATTAGGAGTAAGGTCCC 57.352 43.478 0.00 0.00 46.74 4.46
3538 10488 8.980481 ATGTACAAATTCCATTAGGAGTAAGG 57.020 34.615 0.00 0.00 46.74 2.69
3539 10489 9.057089 GGATGTACAAATTCCATTAGGAGTAAG 57.943 37.037 8.80 0.00 46.74 2.34
3577 10527 8.855110 TGTTGTGAATATCCTACAAACACAATT 58.145 29.630 0.00 0.00 44.38 2.32
3589 10539 8.472413 CATTTCTTGGATTGTTGTGAATATCCT 58.528 33.333 0.00 0.00 37.90 3.24
3590 10540 7.223387 GCATTTCTTGGATTGTTGTGAATATCC 59.777 37.037 0.00 0.00 37.62 2.59
3596 10546 4.022068 GGAGCATTTCTTGGATTGTTGTGA 60.022 41.667 0.00 0.00 0.00 3.58
3597 10547 4.021719 AGGAGCATTTCTTGGATTGTTGTG 60.022 41.667 0.00 0.00 0.00 3.33
3688 10638 3.209410 AGAGCTTTCACAGACAACTTGG 58.791 45.455 0.00 0.00 0.00 3.61
3694 10644 2.158914 TGCAAGAGAGCTTTCACAGACA 60.159 45.455 7.06 0.00 34.99 3.41
3695 10645 2.479656 CTGCAAGAGAGCTTTCACAGAC 59.520 50.000 13.45 0.00 34.07 3.51
3696 10646 2.103771 ACTGCAAGAGAGCTTTCACAGA 59.896 45.455 21.17 0.00 37.43 3.41
3706 10656 1.795286 GACGAACCAACTGCAAGAGAG 59.205 52.381 0.00 0.00 37.43 3.20
3729 10679 3.515502 TCATCAAGGGACCTCACAGTTAG 59.484 47.826 0.00 0.00 0.00 2.34
3759 10709 4.022589 TCTGGTTGTTCCGTCTAAGTAGTG 60.023 45.833 0.00 0.00 39.52 2.74
3794 10744 8.709646 ACATAAACTAGTCGAGAAACATTTGAC 58.290 33.333 0.00 0.00 0.00 3.18
3806 10756 7.258441 CAGGAATCAAGACATAAACTAGTCGA 58.742 38.462 0.00 0.00 39.67 4.20
3808 10758 7.331791 ACCAGGAATCAAGACATAAACTAGTC 58.668 38.462 0.00 0.00 35.02 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.