Multiple sequence alignment - TraesCS7B01G044900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G044900 chr7B 100.000 2384 0 0 1 2384 44272964 44270581 0.000000e+00 4403.0
1 TraesCS7B01G044900 chr7B 86.013 1337 112 45 414 1722 44294142 44292853 0.000000e+00 1363.0
2 TraesCS7B01G044900 chr7B 86.360 1195 114 25 543 1727 44259078 44257923 0.000000e+00 1258.0
3 TraesCS7B01G044900 chr7B 90.476 42 4 0 2041 2082 43548454 43548413 3.310000e-04 56.5
4 TraesCS7B01G044900 chr7A 88.276 1160 76 27 819 1942 94400483 94399348 0.000000e+00 1334.0
5 TraesCS7B01G044900 chr7A 86.448 1188 112 21 543 1722 94384824 94383678 0.000000e+00 1256.0
6 TraesCS7B01G044900 chr7A 94.915 354 17 1 2031 2384 94397281 94396929 9.630000e-154 553.0
7 TraesCS7B01G044900 chr7A 78.824 255 49 5 160 412 376661857 376661606 1.470000e-37 167.0
8 TraesCS7B01G044900 chr7D 88.692 734 63 9 82 801 92235966 92235239 0.000000e+00 878.0
9 TraesCS7B01G044900 chr7D 89.482 656 51 7 634 1278 92230562 92229914 0.000000e+00 813.0
10 TraesCS7B01G044900 chr7D 89.941 507 42 6 1226 1726 92229912 92229409 0.000000e+00 645.0
11 TraesCS7B01G044900 chr7D 80.926 886 96 40 414 1263 92238583 92237735 1.200000e-177 632.0
12 TraesCS7B01G044900 chr7D 87.302 504 36 14 1228 1724 92237734 92237252 3.460000e-153 551.0
13 TraesCS7B01G044900 chr7D 93.007 143 9 1 1221 1362 92234694 92234552 8.640000e-50 207.0
14 TraesCS7B01G044900 chr1A 78.235 170 29 7 245 412 239108297 239108460 4.190000e-18 102.0
15 TraesCS7B01G044900 chr2D 91.837 49 4 0 366 414 547572327 547572279 4.250000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G044900 chr7B 44270581 44272964 2383 True 4403.0 4403 100.0000 1 2384 1 chr7B.!!$R3 2383
1 TraesCS7B01G044900 chr7B 44292853 44294142 1289 True 1363.0 1363 86.0130 414 1722 1 chr7B.!!$R4 1308
2 TraesCS7B01G044900 chr7B 44257923 44259078 1155 True 1258.0 1258 86.3600 543 1727 1 chr7B.!!$R2 1184
3 TraesCS7B01G044900 chr7A 94383678 94384824 1146 True 1256.0 1256 86.4480 543 1722 1 chr7A.!!$R1 1179
4 TraesCS7B01G044900 chr7A 94396929 94400483 3554 True 943.5 1334 91.5955 819 2384 2 chr7A.!!$R3 1565
5 TraesCS7B01G044900 chr7D 92229409 92238583 9174 True 621.0 878 88.2250 82 1726 6 chr7D.!!$R1 1644

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
278 279 0.033228 CTCTGACCGGGATGAGCATC 59.967 60.0 6.32 1.86 37.11 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2009 11755 0.112412 TTCAACTCCCTTTCCCAGGC 59.888 55.0 0.0 0.0 42.29 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.565764 CTGATAGACAATGCCTTCCCA 57.434 47.619 0.00 0.00 0.00 4.37
21 22 3.209410 CTGATAGACAATGCCTTCCCAC 58.791 50.000 0.00 0.00 0.00 4.61
22 23 2.213499 GATAGACAATGCCTTCCCACG 58.787 52.381 0.00 0.00 0.00 4.94
23 24 1.271856 TAGACAATGCCTTCCCACGA 58.728 50.000 0.00 0.00 0.00 4.35
24 25 0.620556 AGACAATGCCTTCCCACGAT 59.379 50.000 0.00 0.00 0.00 3.73
25 26 0.734889 GACAATGCCTTCCCACGATG 59.265 55.000 0.00 0.00 0.00 3.84
26 27 1.315257 ACAATGCCTTCCCACGATGC 61.315 55.000 0.00 0.00 0.00 3.91
27 28 2.114670 AATGCCTTCCCACGATGCG 61.115 57.895 0.00 0.00 0.00 4.73
28 29 4.776322 TGCCTTCCCACGATGCGG 62.776 66.667 0.00 0.00 0.00 5.69
30 31 4.096003 CCTTCCCACGATGCGGGT 62.096 66.667 0.00 0.00 44.81 5.28
31 32 2.046314 CTTCCCACGATGCGGGTT 60.046 61.111 0.00 0.00 44.81 4.11
32 33 2.046700 TTCCCACGATGCGGGTTC 60.047 61.111 0.00 0.00 44.81 3.62
33 34 3.615509 TTCCCACGATGCGGGTTCC 62.616 63.158 0.00 0.00 44.81 3.62
34 35 4.402528 CCCACGATGCGGGTTCCA 62.403 66.667 0.00 0.00 39.05 3.53
35 36 2.359354 CCACGATGCGGGTTCCAA 60.359 61.111 0.00 0.00 0.00 3.53
36 37 1.969064 CCACGATGCGGGTTCCAAA 60.969 57.895 0.00 0.00 0.00 3.28
37 38 1.312371 CCACGATGCGGGTTCCAAAT 61.312 55.000 0.00 0.00 0.00 2.32
38 39 1.374560 CACGATGCGGGTTCCAAATA 58.625 50.000 0.00 0.00 0.00 1.40
39 40 1.946768 CACGATGCGGGTTCCAAATAT 59.053 47.619 0.00 0.00 0.00 1.28
40 41 2.357637 CACGATGCGGGTTCCAAATATT 59.642 45.455 0.00 0.00 0.00 1.28
41 42 2.616842 ACGATGCGGGTTCCAAATATTC 59.383 45.455 0.00 0.00 0.00 1.75
42 43 2.031157 CGATGCGGGTTCCAAATATTCC 60.031 50.000 0.00 0.00 0.00 3.01
43 44 2.516227 TGCGGGTTCCAAATATTCCA 57.484 45.000 0.00 0.00 0.00 3.53
44 45 2.808919 TGCGGGTTCCAAATATTCCAA 58.191 42.857 0.00 0.00 0.00 3.53
45 46 2.494073 TGCGGGTTCCAAATATTCCAAC 59.506 45.455 0.00 0.00 0.00 3.77
46 47 2.159156 GCGGGTTCCAAATATTCCAACC 60.159 50.000 11.97 11.97 36.53 3.77
47 48 3.361786 CGGGTTCCAAATATTCCAACCT 58.638 45.455 16.80 0.00 37.30 3.50
48 49 3.130340 CGGGTTCCAAATATTCCAACCTG 59.870 47.826 16.80 15.22 37.30 4.00
49 50 3.450817 GGGTTCCAAATATTCCAACCTGG 59.549 47.826 16.80 8.51 37.30 4.45
50 51 4.349365 GGTTCCAAATATTCCAACCTGGA 58.651 43.478 0.00 7.69 46.61 3.86
59 60 0.036164 TCCAACCTGGATGTGAACCG 59.964 55.000 0.00 0.00 42.67 4.44
60 61 0.960364 CCAACCTGGATGTGAACCGG 60.960 60.000 0.00 0.00 40.96 5.28
61 62 1.303317 AACCTGGATGTGAACCGGC 60.303 57.895 0.00 0.00 32.89 6.13
62 63 2.819595 CCTGGATGTGAACCGGCG 60.820 66.667 0.00 0.00 32.89 6.46
63 64 2.264480 CTGGATGTGAACCGGCGA 59.736 61.111 9.30 0.00 0.00 5.54
64 65 1.811266 CTGGATGTGAACCGGCGAG 60.811 63.158 9.30 0.06 0.00 5.03
65 66 3.195698 GGATGTGAACCGGCGAGC 61.196 66.667 9.30 0.00 0.00 5.03
66 67 2.125512 GATGTGAACCGGCGAGCT 60.126 61.111 9.30 0.00 0.00 4.09
67 68 2.125512 ATGTGAACCGGCGAGCTC 60.126 61.111 9.30 2.73 0.00 4.09
68 69 3.665675 ATGTGAACCGGCGAGCTCC 62.666 63.158 9.30 0.47 0.00 4.70
69 70 4.373116 GTGAACCGGCGAGCTCCA 62.373 66.667 9.30 0.00 0.00 3.86
70 71 4.373116 TGAACCGGCGAGCTCCAC 62.373 66.667 9.30 0.00 0.00 4.02
71 72 4.070552 GAACCGGCGAGCTCCACT 62.071 66.667 9.30 0.00 0.00 4.00
72 73 3.991536 GAACCGGCGAGCTCCACTC 62.992 68.421 9.30 0.00 42.47 3.51
79 80 2.183046 GAGCTCCACTCGCAGGTC 59.817 66.667 0.87 0.00 35.18 3.85
80 81 2.283532 AGCTCCACTCGCAGGTCT 60.284 61.111 0.00 0.00 0.00 3.85
81 82 2.183046 GCTCCACTCGCAGGTCTC 59.817 66.667 0.00 0.00 0.00 3.36
82 83 2.888863 CTCCACTCGCAGGTCTCC 59.111 66.667 0.00 0.00 0.00 3.71
83 84 3.057547 CTCCACTCGCAGGTCTCCG 62.058 68.421 0.00 0.00 0.00 4.63
84 85 3.062466 CCACTCGCAGGTCTCCGA 61.062 66.667 0.00 0.00 0.00 4.55
85 86 2.179517 CACTCGCAGGTCTCCGAC 59.820 66.667 0.00 0.00 0.00 4.79
86 87 3.432588 ACTCGCAGGTCTCCGACG 61.433 66.667 0.00 0.00 32.65 5.12
87 88 3.125573 CTCGCAGGTCTCCGACGA 61.126 66.667 0.00 6.18 35.29 4.20
88 89 3.102107 CTCGCAGGTCTCCGACGAG 62.102 68.421 14.93 14.93 43.23 4.18
89 90 3.432588 CGCAGGTCTCCGACGAGT 61.433 66.667 0.00 0.00 37.40 4.18
90 91 2.104859 CGCAGGTCTCCGACGAGTA 61.105 63.158 0.00 0.00 37.40 2.59
91 92 1.437772 CGCAGGTCTCCGACGAGTAT 61.438 60.000 0.00 0.00 37.40 2.12
92 93 1.590932 GCAGGTCTCCGACGAGTATA 58.409 55.000 0.00 0.00 37.40 1.47
93 94 1.263752 GCAGGTCTCCGACGAGTATAC 59.736 57.143 0.00 0.00 37.40 1.47
94 95 1.526041 CAGGTCTCCGACGAGTATACG 59.474 57.143 0.00 0.00 37.40 3.06
95 96 0.864455 GGTCTCCGACGAGTATACGG 59.136 60.000 0.00 0.00 46.71 4.02
99 100 4.486090 CGACGAGTATACGGACGC 57.514 61.111 15.75 10.14 37.61 5.19
100 101 1.083144 CGACGAGTATACGGACGCC 60.083 63.158 15.75 7.76 37.61 5.68
101 102 1.281049 GACGAGTATACGGACGCCC 59.719 63.158 15.75 7.99 37.61 6.13
102 103 1.439353 GACGAGTATACGGACGCCCA 61.439 60.000 15.75 0.00 37.61 5.36
103 104 1.009222 CGAGTATACGGACGCCCAC 60.009 63.158 0.00 0.00 0.00 4.61
104 105 1.717791 CGAGTATACGGACGCCCACA 61.718 60.000 0.00 0.00 0.00 4.17
105 106 0.248784 GAGTATACGGACGCCCACAC 60.249 60.000 0.00 0.00 0.00 3.82
106 107 0.966875 AGTATACGGACGCCCACACA 60.967 55.000 0.00 0.00 0.00 3.72
107 108 0.103572 GTATACGGACGCCCACACAT 59.896 55.000 0.00 0.00 0.00 3.21
108 109 1.337703 GTATACGGACGCCCACACATA 59.662 52.381 0.00 0.00 0.00 2.29
109 110 0.103572 ATACGGACGCCCACACATAC 59.896 55.000 0.00 0.00 0.00 2.39
110 111 1.947597 TACGGACGCCCACACATACC 61.948 60.000 0.00 0.00 0.00 2.73
111 112 2.987125 GGACGCCCACACATACCT 59.013 61.111 0.00 0.00 0.00 3.08
112 113 1.298667 GGACGCCCACACATACCTT 59.701 57.895 0.00 0.00 0.00 3.50
113 114 0.322187 GGACGCCCACACATACCTTT 60.322 55.000 0.00 0.00 0.00 3.11
114 115 1.084289 GACGCCCACACATACCTTTC 58.916 55.000 0.00 0.00 0.00 2.62
115 116 0.398696 ACGCCCACACATACCTTTCA 59.601 50.000 0.00 0.00 0.00 2.69
116 117 1.004277 ACGCCCACACATACCTTTCAT 59.996 47.619 0.00 0.00 0.00 2.57
117 118 1.670811 CGCCCACACATACCTTTCATC 59.329 52.381 0.00 0.00 0.00 2.92
118 119 2.680805 CGCCCACACATACCTTTCATCT 60.681 50.000 0.00 0.00 0.00 2.90
119 120 3.356290 GCCCACACATACCTTTCATCTT 58.644 45.455 0.00 0.00 0.00 2.40
120 121 3.378427 GCCCACACATACCTTTCATCTTC 59.622 47.826 0.00 0.00 0.00 2.87
121 122 4.588899 CCCACACATACCTTTCATCTTCA 58.411 43.478 0.00 0.00 0.00 3.02
122 123 5.195940 CCCACACATACCTTTCATCTTCAT 58.804 41.667 0.00 0.00 0.00 2.57
123 124 5.066893 CCCACACATACCTTTCATCTTCATG 59.933 44.000 0.00 0.00 0.00 3.07
124 125 5.449588 CCACACATACCTTTCATCTTCATGC 60.450 44.000 0.00 0.00 0.00 4.06
125 126 5.356190 CACACATACCTTTCATCTTCATGCT 59.644 40.000 0.00 0.00 0.00 3.79
126 127 5.587844 ACACATACCTTTCATCTTCATGCTC 59.412 40.000 0.00 0.00 0.00 4.26
127 128 5.587443 CACATACCTTTCATCTTCATGCTCA 59.413 40.000 0.00 0.00 0.00 4.26
128 129 6.262496 CACATACCTTTCATCTTCATGCTCAT 59.738 38.462 0.00 0.00 0.00 2.90
129 130 7.443272 CACATACCTTTCATCTTCATGCTCATA 59.557 37.037 0.00 0.00 0.00 2.15
130 131 7.443575 ACATACCTTTCATCTTCATGCTCATAC 59.556 37.037 0.00 0.00 0.00 2.39
131 132 5.999044 ACCTTTCATCTTCATGCTCATACT 58.001 37.500 0.00 0.00 0.00 2.12
132 133 6.421485 ACCTTTCATCTTCATGCTCATACTT 58.579 36.000 0.00 0.00 0.00 2.24
133 134 6.318144 ACCTTTCATCTTCATGCTCATACTTG 59.682 38.462 0.00 0.00 0.00 3.16
134 135 6.318144 CCTTTCATCTTCATGCTCATACTTGT 59.682 38.462 0.00 0.00 0.00 3.16
135 136 6.915544 TTCATCTTCATGCTCATACTTGTC 57.084 37.500 0.00 0.00 0.00 3.18
136 137 6.231258 TCATCTTCATGCTCATACTTGTCT 57.769 37.500 0.00 0.00 0.00 3.41
137 138 6.647229 TCATCTTCATGCTCATACTTGTCTT 58.353 36.000 0.00 0.00 0.00 3.01
138 139 6.760298 TCATCTTCATGCTCATACTTGTCTTC 59.240 38.462 0.00 0.00 0.00 2.87
139 140 6.041423 TCTTCATGCTCATACTTGTCTTCA 57.959 37.500 0.00 0.00 0.00 3.02
140 141 6.647229 TCTTCATGCTCATACTTGTCTTCAT 58.353 36.000 0.00 0.00 0.00 2.57
141 142 6.760298 TCTTCATGCTCATACTTGTCTTCATC 59.240 38.462 0.00 0.00 0.00 2.92
142 143 6.231258 TCATGCTCATACTTGTCTTCATCT 57.769 37.500 0.00 0.00 0.00 2.90
143 144 6.647229 TCATGCTCATACTTGTCTTCATCTT 58.353 36.000 0.00 0.00 0.00 2.40
144 145 6.760298 TCATGCTCATACTTGTCTTCATCTTC 59.240 38.462 0.00 0.00 0.00 2.87
145 146 6.041423 TGCTCATACTTGTCTTCATCTTCA 57.959 37.500 0.00 0.00 0.00 3.02
146 147 6.466812 TGCTCATACTTGTCTTCATCTTCAA 58.533 36.000 0.00 0.00 0.00 2.69
147 148 6.936335 TGCTCATACTTGTCTTCATCTTCAAA 59.064 34.615 0.00 0.00 0.00 2.69
148 149 7.118825 TGCTCATACTTGTCTTCATCTTCAAAG 59.881 37.037 0.00 0.00 0.00 2.77
149 150 7.369803 TCATACTTGTCTTCATCTTCAAAGC 57.630 36.000 0.00 0.00 0.00 3.51
150 151 6.936335 TCATACTTGTCTTCATCTTCAAAGCA 59.064 34.615 0.00 0.00 0.00 3.91
151 152 5.686159 ACTTGTCTTCATCTTCAAAGCAG 57.314 39.130 0.00 0.00 0.00 4.24
152 153 5.371526 ACTTGTCTTCATCTTCAAAGCAGA 58.628 37.500 0.00 0.00 0.00 4.26
153 154 6.002704 ACTTGTCTTCATCTTCAAAGCAGAT 58.997 36.000 0.00 0.00 0.00 2.90
154 155 7.164122 ACTTGTCTTCATCTTCAAAGCAGATA 58.836 34.615 0.00 0.00 29.36 1.98
155 156 7.663081 ACTTGTCTTCATCTTCAAAGCAGATAA 59.337 33.333 0.00 0.00 29.36 1.75
156 157 7.984422 TGTCTTCATCTTCAAAGCAGATAAA 57.016 32.000 0.00 0.00 29.36 1.40
157 158 8.394971 TGTCTTCATCTTCAAAGCAGATAAAA 57.605 30.769 0.00 0.00 29.36 1.52
158 159 8.849168 TGTCTTCATCTTCAAAGCAGATAAAAA 58.151 29.630 0.00 0.00 29.36 1.94
159 160 9.122613 GTCTTCATCTTCAAAGCAGATAAAAAC 57.877 33.333 0.00 0.00 29.36 2.43
160 161 9.071276 TCTTCATCTTCAAAGCAGATAAAAACT 57.929 29.630 0.00 0.00 29.36 2.66
161 162 9.339492 CTTCATCTTCAAAGCAGATAAAAACTC 57.661 33.333 0.00 0.00 29.36 3.01
162 163 7.521529 TCATCTTCAAAGCAGATAAAAACTCG 58.478 34.615 0.00 0.00 29.36 4.18
163 164 5.689819 TCTTCAAAGCAGATAAAAACTCGC 58.310 37.500 0.00 0.00 0.00 5.03
164 165 4.065423 TCAAAGCAGATAAAAACTCGCG 57.935 40.909 0.00 0.00 0.00 5.87
165 166 3.120338 TCAAAGCAGATAAAAACTCGCGG 60.120 43.478 6.13 0.00 0.00 6.46
166 167 2.094762 AGCAGATAAAAACTCGCGGT 57.905 45.000 6.13 0.00 0.00 5.68
167 168 1.732259 AGCAGATAAAAACTCGCGGTG 59.268 47.619 6.13 1.77 0.00 4.94
168 169 1.463444 GCAGATAAAAACTCGCGGTGT 59.537 47.619 6.13 2.54 0.00 4.16
169 170 2.474032 GCAGATAAAAACTCGCGGTGTC 60.474 50.000 6.13 0.00 0.00 3.67
170 171 2.093783 CAGATAAAAACTCGCGGTGTCC 59.906 50.000 6.13 0.00 0.00 4.02
171 172 1.395954 GATAAAAACTCGCGGTGTCCC 59.604 52.381 6.13 0.00 0.00 4.46
172 173 0.603439 TAAAAACTCGCGGTGTCCCC 60.603 55.000 6.13 0.00 0.00 4.81
181 182 3.932483 GGTGTCCCCGGTGTTCGT 61.932 66.667 0.00 0.00 37.11 3.85
182 183 2.109593 GTGTCCCCGGTGTTCGTT 59.890 61.111 0.00 0.00 37.11 3.85
183 184 1.524393 GTGTCCCCGGTGTTCGTTT 60.524 57.895 0.00 0.00 37.11 3.60
184 185 1.096967 GTGTCCCCGGTGTTCGTTTT 61.097 55.000 0.00 0.00 37.11 2.43
185 186 1.096386 TGTCCCCGGTGTTCGTTTTG 61.096 55.000 0.00 0.00 37.11 2.44
186 187 0.814812 GTCCCCGGTGTTCGTTTTGA 60.815 55.000 0.00 0.00 37.11 2.69
187 188 0.814812 TCCCCGGTGTTCGTTTTGAC 60.815 55.000 0.00 0.00 37.11 3.18
188 189 1.277440 CCCGGTGTTCGTTTTGACG 59.723 57.895 0.00 0.00 37.11 4.35
189 190 1.152989 CCCGGTGTTCGTTTTGACGA 61.153 55.000 0.00 0.00 40.66 4.20
190 191 0.863144 CCGGTGTTCGTTTTGACGAT 59.137 50.000 2.26 0.00 42.02 3.73
191 192 1.397945 CCGGTGTTCGTTTTGACGATG 60.398 52.381 2.26 0.00 42.02 3.84
192 193 1.259507 CGGTGTTCGTTTTGACGATGT 59.740 47.619 2.26 0.00 42.02 3.06
193 194 2.285950 CGGTGTTCGTTTTGACGATGTT 60.286 45.455 2.26 0.00 42.02 2.71
194 195 3.060406 CGGTGTTCGTTTTGACGATGTTA 60.060 43.478 2.26 0.00 42.02 2.41
195 196 4.451557 GGTGTTCGTTTTGACGATGTTAG 58.548 43.478 2.26 0.00 42.02 2.34
196 197 4.209703 GGTGTTCGTTTTGACGATGTTAGA 59.790 41.667 2.26 0.00 42.02 2.10
197 198 5.128468 GTGTTCGTTTTGACGATGTTAGAC 58.872 41.667 2.26 0.00 42.02 2.59
198 199 4.085466 TGTTCGTTTTGACGATGTTAGACG 60.085 41.667 2.26 0.00 42.02 4.18
199 200 3.631144 TCGTTTTGACGATGTTAGACGT 58.369 40.909 0.00 0.00 45.32 4.34
208 209 5.368256 ACGATGTTAGACGTCTTACTTGT 57.632 39.130 28.76 21.81 38.34 3.16
209 210 5.766222 ACGATGTTAGACGTCTTACTTGTT 58.234 37.500 28.76 14.97 38.34 2.83
210 211 5.855395 ACGATGTTAGACGTCTTACTTGTTC 59.145 40.000 28.76 19.82 38.34 3.18
211 212 5.002282 CGATGTTAGACGTCTTACTTGTTCG 59.998 44.000 28.76 24.91 32.08 3.95
212 213 4.539870 TGTTAGACGTCTTACTTGTTCGG 58.460 43.478 28.76 0.00 0.00 4.30
213 214 4.036734 TGTTAGACGTCTTACTTGTTCGGT 59.963 41.667 28.76 3.61 0.00 4.69
214 215 3.279853 AGACGTCTTACTTGTTCGGTC 57.720 47.619 13.58 0.00 0.00 4.79
215 216 2.030451 AGACGTCTTACTTGTTCGGTCC 60.030 50.000 13.58 0.00 0.00 4.46
216 217 1.334054 CGTCTTACTTGTTCGGTCCG 58.666 55.000 4.39 4.39 0.00 4.79
217 218 1.066136 GTCTTACTTGTTCGGTCCGC 58.934 55.000 6.34 0.00 0.00 5.54
218 219 0.037975 TCTTACTTGTTCGGTCCGCC 60.038 55.000 6.34 0.00 0.00 6.13
219 220 0.037605 CTTACTTGTTCGGTCCGCCT 60.038 55.000 6.34 0.00 0.00 5.52
220 221 0.037975 TTACTTGTTCGGTCCGCCTC 60.038 55.000 6.34 0.00 0.00 4.70
221 222 0.896940 TACTTGTTCGGTCCGCCTCT 60.897 55.000 6.34 0.00 0.00 3.69
222 223 1.446272 CTTGTTCGGTCCGCCTCTC 60.446 63.158 6.34 0.00 0.00 3.20
223 224 2.837371 CTTGTTCGGTCCGCCTCTCC 62.837 65.000 6.34 0.00 0.00 3.71
224 225 3.069318 GTTCGGTCCGCCTCTCCT 61.069 66.667 6.34 0.00 0.00 3.69
225 226 3.068691 TTCGGTCCGCCTCTCCTG 61.069 66.667 6.34 0.00 0.00 3.86
226 227 3.881019 TTCGGTCCGCCTCTCCTGT 62.881 63.158 6.34 0.00 0.00 4.00
227 228 3.382832 CGGTCCGCCTCTCCTGTT 61.383 66.667 0.00 0.00 0.00 3.16
228 229 2.579738 GGTCCGCCTCTCCTGTTC 59.420 66.667 0.00 0.00 0.00 3.18
229 230 2.182030 GTCCGCCTCTCCTGTTCG 59.818 66.667 0.00 0.00 0.00 3.95
230 231 3.068691 TCCGCCTCTCCTGTTCGG 61.069 66.667 0.00 0.00 41.30 4.30
231 232 4.148825 CCGCCTCTCCTGTTCGGG 62.149 72.222 0.00 0.00 36.73 5.14
232 233 4.148825 CGCCTCTCCTGTTCGGGG 62.149 72.222 0.00 0.00 32.98 5.73
233 234 4.475135 GCCTCTCCTGTTCGGGGC 62.475 72.222 0.00 0.00 31.12 5.80
234 235 2.685380 CCTCTCCTGTTCGGGGCT 60.685 66.667 0.00 0.00 31.12 5.19
235 236 2.294078 CCTCTCCTGTTCGGGGCTT 61.294 63.158 0.00 0.00 31.12 4.35
236 237 1.679898 CTCTCCTGTTCGGGGCTTT 59.320 57.895 0.00 0.00 31.12 3.51
237 238 0.674895 CTCTCCTGTTCGGGGCTTTG 60.675 60.000 0.00 0.00 31.12 2.77
238 239 1.073199 CTCCTGTTCGGGGCTTTGT 59.927 57.895 0.00 0.00 0.00 2.83
239 240 1.228124 TCCTGTTCGGGGCTTTGTG 60.228 57.895 0.00 0.00 0.00 3.33
240 241 1.228124 CCTGTTCGGGGCTTTGTGA 60.228 57.895 0.00 0.00 0.00 3.58
241 242 1.237285 CCTGTTCGGGGCTTTGTGAG 61.237 60.000 0.00 0.00 0.00 3.51
242 243 0.535102 CTGTTCGGGGCTTTGTGAGT 60.535 55.000 0.00 0.00 0.00 3.41
243 244 0.534203 TGTTCGGGGCTTTGTGAGTC 60.534 55.000 0.00 0.00 0.00 3.36
244 245 0.250338 GTTCGGGGCTTTGTGAGTCT 60.250 55.000 0.00 0.00 0.00 3.24
245 246 1.001633 GTTCGGGGCTTTGTGAGTCTA 59.998 52.381 0.00 0.00 0.00 2.59
246 247 0.895530 TCGGGGCTTTGTGAGTCTAG 59.104 55.000 0.00 0.00 0.00 2.43
247 248 0.741221 CGGGGCTTTGTGAGTCTAGC 60.741 60.000 0.00 0.00 0.00 3.42
248 249 0.615850 GGGGCTTTGTGAGTCTAGCT 59.384 55.000 0.00 0.00 34.16 3.32
249 250 1.677217 GGGGCTTTGTGAGTCTAGCTG 60.677 57.143 0.00 0.00 34.16 4.24
250 251 1.002544 GGGCTTTGTGAGTCTAGCTGT 59.997 52.381 0.00 0.00 34.16 4.40
251 252 2.072298 GGCTTTGTGAGTCTAGCTGTG 58.928 52.381 0.00 0.00 34.16 3.66
252 253 2.548920 GGCTTTGTGAGTCTAGCTGTGT 60.549 50.000 0.00 0.00 34.16 3.72
253 254 2.478134 GCTTTGTGAGTCTAGCTGTGTG 59.522 50.000 0.00 0.00 0.00 3.82
254 255 2.820059 TTGTGAGTCTAGCTGTGTGG 57.180 50.000 0.00 0.00 0.00 4.17
255 256 1.704641 TGTGAGTCTAGCTGTGTGGT 58.295 50.000 0.00 0.00 0.00 4.16
256 257 2.039418 TGTGAGTCTAGCTGTGTGGTT 58.961 47.619 0.00 0.00 0.00 3.67
257 258 2.434336 TGTGAGTCTAGCTGTGTGGTTT 59.566 45.455 0.00 0.00 0.00 3.27
258 259 3.060602 GTGAGTCTAGCTGTGTGGTTTC 58.939 50.000 0.00 0.00 0.00 2.78
259 260 2.037251 TGAGTCTAGCTGTGTGGTTTCC 59.963 50.000 0.00 0.00 0.00 3.13
260 261 2.300437 GAGTCTAGCTGTGTGGTTTCCT 59.700 50.000 0.00 0.00 0.00 3.36
261 262 2.300437 AGTCTAGCTGTGTGGTTTCCTC 59.700 50.000 0.00 0.00 0.00 3.71
262 263 2.300437 GTCTAGCTGTGTGGTTTCCTCT 59.700 50.000 0.00 0.00 0.00 3.69
263 264 2.300152 TCTAGCTGTGTGGTTTCCTCTG 59.700 50.000 0.00 0.00 0.00 3.35
264 265 1.131638 AGCTGTGTGGTTTCCTCTGA 58.868 50.000 0.00 0.00 0.00 3.27
265 266 1.202698 AGCTGTGTGGTTTCCTCTGAC 60.203 52.381 0.00 0.00 0.00 3.51
266 267 1.884235 CTGTGTGGTTTCCTCTGACC 58.116 55.000 0.00 0.00 36.45 4.02
267 268 0.105964 TGTGTGGTTTCCTCTGACCG 59.894 55.000 0.00 0.00 38.81 4.79
268 269 0.602905 GTGTGGTTTCCTCTGACCGG 60.603 60.000 0.00 0.00 38.81 5.28
269 270 1.003718 GTGGTTTCCTCTGACCGGG 60.004 63.158 6.32 0.00 38.81 5.73
270 271 1.152204 TGGTTTCCTCTGACCGGGA 60.152 57.895 6.32 0.00 38.81 5.14
271 272 0.546747 TGGTTTCCTCTGACCGGGAT 60.547 55.000 6.32 0.00 38.81 3.85
272 273 0.107654 GGTTTCCTCTGACCGGGATG 60.108 60.000 6.32 0.00 0.00 3.51
273 274 0.902531 GTTTCCTCTGACCGGGATGA 59.097 55.000 6.32 0.00 0.00 2.92
274 275 1.134670 GTTTCCTCTGACCGGGATGAG 60.135 57.143 6.32 9.60 0.00 2.90
275 276 1.330655 TTCCTCTGACCGGGATGAGC 61.331 60.000 6.32 0.00 0.00 4.26
276 277 2.060383 CCTCTGACCGGGATGAGCA 61.060 63.158 6.32 0.00 0.00 4.26
277 278 1.406065 CCTCTGACCGGGATGAGCAT 61.406 60.000 6.32 0.00 0.00 3.79
278 279 0.033228 CTCTGACCGGGATGAGCATC 59.967 60.000 6.32 1.86 37.11 3.91
279 280 0.397675 TCTGACCGGGATGAGCATCT 60.398 55.000 6.32 0.00 37.92 2.90
280 281 0.033228 CTGACCGGGATGAGCATCTC 59.967 60.000 6.32 5.41 37.92 2.75
281 282 0.397675 TGACCGGGATGAGCATCTCT 60.398 55.000 6.32 0.00 36.17 3.10
282 283 0.755686 GACCGGGATGAGCATCTCTT 59.244 55.000 6.32 0.00 36.17 2.85
283 284 0.467384 ACCGGGATGAGCATCTCTTG 59.533 55.000 6.32 2.74 36.17 3.02
284 285 0.467384 CCGGGATGAGCATCTCTTGT 59.533 55.000 8.57 0.00 36.17 3.16
285 286 1.539929 CCGGGATGAGCATCTCTTGTC 60.540 57.143 8.57 0.00 36.17 3.18
286 287 1.539929 CGGGATGAGCATCTCTTGTCC 60.540 57.143 8.57 1.00 36.17 4.02
287 288 1.202746 GGGATGAGCATCTCTTGTCCC 60.203 57.143 10.04 12.89 38.80 4.46
288 289 1.767681 GGATGAGCATCTCTTGTCCCT 59.232 52.381 10.04 0.00 37.92 4.20
289 290 2.224257 GGATGAGCATCTCTTGTCCCTC 60.224 54.545 10.04 0.00 37.92 4.30
290 291 1.198713 TGAGCATCTCTTGTCCCTCC 58.801 55.000 0.00 0.00 34.92 4.30
291 292 0.103937 GAGCATCTCTTGTCCCTCCG 59.896 60.000 0.00 0.00 0.00 4.63
292 293 1.522580 GCATCTCTTGTCCCTCCGC 60.523 63.158 0.00 0.00 0.00 5.54
293 294 1.965754 GCATCTCTTGTCCCTCCGCT 61.966 60.000 0.00 0.00 0.00 5.52
294 295 0.103937 CATCTCTTGTCCCTCCGCTC 59.896 60.000 0.00 0.00 0.00 5.03
295 296 1.045911 ATCTCTTGTCCCTCCGCTCC 61.046 60.000 0.00 0.00 0.00 4.70
296 297 3.068691 TCTTGTCCCTCCGCTCCG 61.069 66.667 0.00 0.00 0.00 4.63
306 307 2.111043 CCGCTCCGGGCATTATGT 59.889 61.111 14.17 0.00 44.15 2.29
307 308 1.525995 CCGCTCCGGGCATTATGTT 60.526 57.895 14.17 0.00 44.15 2.71
308 309 1.507141 CCGCTCCGGGCATTATGTTC 61.507 60.000 14.17 0.00 44.15 3.18
309 310 0.813610 CGCTCCGGGCATTATGTTCA 60.814 55.000 14.17 0.00 41.91 3.18
310 311 0.663153 GCTCCGGGCATTATGTTCAC 59.337 55.000 0.00 0.00 41.35 3.18
311 312 0.937304 CTCCGGGCATTATGTTCACG 59.063 55.000 0.00 0.00 0.00 4.35
312 313 0.250793 TCCGGGCATTATGTTCACGT 59.749 50.000 0.00 0.00 0.00 4.49
313 314 0.655733 CCGGGCATTATGTTCACGTC 59.344 55.000 0.00 0.00 0.00 4.34
314 315 1.651987 CGGGCATTATGTTCACGTCT 58.348 50.000 0.00 0.00 0.00 4.18
315 316 1.593006 CGGGCATTATGTTCACGTCTC 59.407 52.381 0.00 0.00 0.00 3.36
316 317 1.940613 GGGCATTATGTTCACGTCTCC 59.059 52.381 0.00 0.00 0.00 3.71
317 318 2.420129 GGGCATTATGTTCACGTCTCCT 60.420 50.000 0.00 0.00 0.00 3.69
318 319 3.270877 GGCATTATGTTCACGTCTCCTT 58.729 45.455 0.00 0.00 0.00 3.36
319 320 3.063997 GGCATTATGTTCACGTCTCCTTG 59.936 47.826 0.00 0.00 0.00 3.61
320 321 3.485877 GCATTATGTTCACGTCTCCTTGC 60.486 47.826 0.00 0.00 0.00 4.01
321 322 3.394674 TTATGTTCACGTCTCCTTGCA 57.605 42.857 0.00 0.00 0.00 4.08
322 323 2.479566 ATGTTCACGTCTCCTTGCAT 57.520 45.000 0.00 0.00 0.00 3.96
323 324 2.254546 TGTTCACGTCTCCTTGCATT 57.745 45.000 0.00 0.00 0.00 3.56
324 325 2.143122 TGTTCACGTCTCCTTGCATTC 58.857 47.619 0.00 0.00 0.00 2.67
325 326 1.126846 GTTCACGTCTCCTTGCATTCG 59.873 52.381 0.00 0.00 0.00 3.34
326 327 0.317160 TCACGTCTCCTTGCATTCGT 59.683 50.000 0.00 0.00 0.00 3.85
327 328 0.439985 CACGTCTCCTTGCATTCGTG 59.560 55.000 0.00 0.00 41.40 4.35
328 329 0.033504 ACGTCTCCTTGCATTCGTGT 59.966 50.000 0.00 0.00 0.00 4.49
329 330 0.716108 CGTCTCCTTGCATTCGTGTC 59.284 55.000 0.00 0.00 0.00 3.67
330 331 1.795768 GTCTCCTTGCATTCGTGTCA 58.204 50.000 0.00 0.00 0.00 3.58
331 332 2.350522 GTCTCCTTGCATTCGTGTCAT 58.649 47.619 0.00 0.00 0.00 3.06
332 333 2.094894 GTCTCCTTGCATTCGTGTCATG 59.905 50.000 0.00 0.00 0.00 3.07
333 334 2.079158 CTCCTTGCATTCGTGTCATGT 58.921 47.619 0.00 0.00 0.00 3.21
334 335 1.805943 TCCTTGCATTCGTGTCATGTG 59.194 47.619 0.00 0.00 0.00 3.21
335 336 1.536766 CCTTGCATTCGTGTCATGTGT 59.463 47.619 0.00 0.00 0.00 3.72
336 337 2.030893 CCTTGCATTCGTGTCATGTGTT 60.031 45.455 0.00 0.00 0.00 3.32
337 338 2.684754 TGCATTCGTGTCATGTGTTG 57.315 45.000 0.00 0.00 0.00 3.33
338 339 1.946081 TGCATTCGTGTCATGTGTTGT 59.054 42.857 0.00 0.00 0.00 3.32
339 340 3.134458 TGCATTCGTGTCATGTGTTGTA 58.866 40.909 0.00 0.00 0.00 2.41
340 341 3.750652 TGCATTCGTGTCATGTGTTGTAT 59.249 39.130 0.00 0.00 0.00 2.29
341 342 4.142924 TGCATTCGTGTCATGTGTTGTATC 60.143 41.667 0.00 0.00 0.00 2.24
342 343 4.727734 GCATTCGTGTCATGTGTTGTATCC 60.728 45.833 0.00 0.00 0.00 2.59
343 344 3.953712 TCGTGTCATGTGTTGTATCCT 57.046 42.857 0.00 0.00 0.00 3.24
344 345 4.265904 TCGTGTCATGTGTTGTATCCTT 57.734 40.909 0.00 0.00 0.00 3.36
345 346 3.993736 TCGTGTCATGTGTTGTATCCTTG 59.006 43.478 0.00 0.00 0.00 3.61
346 347 3.745975 CGTGTCATGTGTTGTATCCTTGT 59.254 43.478 0.00 0.00 0.00 3.16
347 348 4.213270 CGTGTCATGTGTTGTATCCTTGTT 59.787 41.667 0.00 0.00 0.00 2.83
348 349 5.277779 CGTGTCATGTGTTGTATCCTTGTTT 60.278 40.000 0.00 0.00 0.00 2.83
349 350 6.073494 CGTGTCATGTGTTGTATCCTTGTTTA 60.073 38.462 0.00 0.00 0.00 2.01
350 351 7.360861 CGTGTCATGTGTTGTATCCTTGTTTAT 60.361 37.037 0.00 0.00 0.00 1.40
351 352 8.941977 GTGTCATGTGTTGTATCCTTGTTTATA 58.058 33.333 0.00 0.00 0.00 0.98
352 353 8.941977 TGTCATGTGTTGTATCCTTGTTTATAC 58.058 33.333 0.00 0.00 0.00 1.47
353 354 9.162764 GTCATGTGTTGTATCCTTGTTTATACT 57.837 33.333 0.00 0.00 31.24 2.12
354 355 9.378551 TCATGTGTTGTATCCTTGTTTATACTC 57.621 33.333 0.00 0.00 31.24 2.59
355 356 9.161629 CATGTGTTGTATCCTTGTTTATACTCA 57.838 33.333 0.00 0.00 31.24 3.41
356 357 9.905713 ATGTGTTGTATCCTTGTTTATACTCAT 57.094 29.630 0.00 0.00 31.24 2.90
357 358 9.733556 TGTGTTGTATCCTTGTTTATACTCATT 57.266 29.630 0.00 0.00 31.24 2.57
366 367 9.753674 TCCTTGTTTATACTCATTTTGATTCCT 57.246 29.630 0.00 0.00 0.00 3.36
403 404 6.274001 AGATACACAATCTTTGCGTATTCG 57.726 37.500 3.29 0.00 42.62 3.34
419 420 5.601582 CGTATTCGCGAAGAAAGTTAAACA 58.398 37.500 27.20 0.00 42.91 2.83
420 421 5.722141 CGTATTCGCGAAGAAAGTTAAACAG 59.278 40.000 27.20 2.88 42.91 3.16
424 425 2.292292 GCGAAGAAAGTTAAACAGCCCA 59.708 45.455 0.00 0.00 0.00 5.36
440 441 4.102996 ACAGCCCAAATTCAAATGGTTTCT 59.897 37.500 0.00 0.00 34.79 2.52
441 442 4.692155 CAGCCCAAATTCAAATGGTTTCTC 59.308 41.667 0.00 0.00 34.79 2.87
442 443 4.002982 GCCCAAATTCAAATGGTTTCTCC 58.997 43.478 0.00 0.00 34.79 3.71
443 444 4.578871 CCCAAATTCAAATGGTTTCTCCC 58.421 43.478 0.00 0.00 34.79 4.30
447 448 5.473066 AATTCAAATGGTTTCTCCCACAG 57.527 39.130 0.00 0.00 37.31 3.66
454 455 4.781775 TGGTTTCTCCCACAGTTTTCTA 57.218 40.909 0.00 0.00 34.77 2.10
455 456 5.118729 TGGTTTCTCCCACAGTTTTCTAA 57.881 39.130 0.00 0.00 34.77 2.10
481 486 3.328939 CGCGAGCAAATATACACGC 57.671 52.632 0.00 0.00 42.07 5.34
483 488 0.234884 GCGAGCAAATATACACGCCC 59.765 55.000 0.00 0.00 40.14 6.13
484 489 0.865769 CGAGCAAATATACACGCCCC 59.134 55.000 0.00 0.00 0.00 5.80
485 490 0.865769 GAGCAAATATACACGCCCCG 59.134 55.000 0.00 0.00 0.00 5.73
486 491 0.534203 AGCAAATATACACGCCCCGG 60.534 55.000 0.00 0.00 0.00 5.73
487 492 0.816421 GCAAATATACACGCCCCGGT 60.816 55.000 0.00 0.00 0.00 5.28
488 493 0.941542 CAAATATACACGCCCCGGTG 59.058 55.000 0.00 0.00 43.54 4.94
489 494 0.816421 AAATATACACGCCCCGGTGC 60.816 55.000 0.00 0.00 41.65 5.01
490 495 1.973816 AATATACACGCCCCGGTGCA 61.974 55.000 10.26 0.00 41.65 4.57
491 496 1.764571 ATATACACGCCCCGGTGCAT 61.765 55.000 10.26 0.00 41.65 3.96
492 497 2.372040 TATACACGCCCCGGTGCATC 62.372 60.000 10.26 0.00 41.65 3.91
497 502 4.864334 GCCCCGGTGCATCTCCAG 62.864 72.222 3.18 0.00 0.00 3.86
524 529 3.329300 GGCAACTTTGAGGAGCAGA 57.671 52.632 0.00 0.00 0.00 4.26
525 530 1.831580 GGCAACTTTGAGGAGCAGAT 58.168 50.000 0.00 0.00 0.00 2.90
526 531 1.471684 GGCAACTTTGAGGAGCAGATG 59.528 52.381 0.00 0.00 0.00 2.90
538 543 5.366477 TGAGGAGCAGATGTGTCCATTATTA 59.634 40.000 12.00 0.00 32.23 0.98
539 544 5.615289 AGGAGCAGATGTGTCCATTATTAC 58.385 41.667 12.00 0.00 32.23 1.89
540 545 4.449068 GGAGCAGATGTGTCCATTATTACG 59.551 45.833 6.60 0.00 0.00 3.18
541 546 5.023533 AGCAGATGTGTCCATTATTACGT 57.976 39.130 0.00 0.00 0.00 3.57
576 581 6.491403 AGGTGCACTTGACAGAATTCTTAATT 59.509 34.615 17.98 0.00 0.00 1.40
582 587 7.907045 CACTTGACAGAATTCTTAATTCCATCG 59.093 37.037 4.86 0.00 46.65 3.84
598 603 0.250793 ATCGTTCCCATGGCGTTACA 59.749 50.000 6.09 0.00 0.00 2.41
657 662 0.679002 CCATGGTTGAGGGCAGACAG 60.679 60.000 2.57 0.00 0.00 3.51
661 666 0.036858 GGTTGAGGGCAGACAGACTC 60.037 60.000 0.00 0.00 0.00 3.36
662 667 0.972883 GTTGAGGGCAGACAGACTCT 59.027 55.000 0.00 0.00 0.00 3.24
867 8695 3.394719 GTTCTTCAGACAACAGAGTCCC 58.605 50.000 0.00 0.00 39.34 4.46
868 8696 1.971357 TCTTCAGACAACAGAGTCCCC 59.029 52.381 0.00 0.00 39.34 4.81
869 8697 1.694150 CTTCAGACAACAGAGTCCCCA 59.306 52.381 0.00 0.00 39.34 4.96
870 8698 1.342074 TCAGACAACAGAGTCCCCAG 58.658 55.000 0.00 0.00 39.34 4.45
871 8699 0.321122 CAGACAACAGAGTCCCCAGC 60.321 60.000 0.00 0.00 39.34 4.85
872 8700 0.472734 AGACAACAGAGTCCCCAGCT 60.473 55.000 0.00 0.00 39.34 4.24
873 8701 0.036858 GACAACAGAGTCCCCAGCTC 60.037 60.000 0.00 0.00 32.36 4.09
1107 8935 3.890936 GAGCAAGGCGGCACTCAGT 62.891 63.158 13.08 0.00 35.83 3.41
1204 9061 0.307760 AACCTTGCGTGCTTTCTTCG 59.692 50.000 0.00 0.00 0.00 3.79
1211 9068 0.640768 CGTGCTTTCTTCGATCGGTC 59.359 55.000 16.41 0.00 0.00 4.79
1222 9079 1.822371 TCGATCGGTCACAGAAATCCA 59.178 47.619 16.41 0.00 0.00 3.41
1238 9095 1.380380 CCATGGAGAAAGGGGTGGC 60.380 63.158 5.56 0.00 0.00 5.01
1291 9202 2.685380 AAGAGGTGGAGGAGGCCG 60.685 66.667 0.00 0.00 0.00 6.13
1317 9228 1.905894 GAAGAGAAAGAGAGGGCAGGT 59.094 52.381 0.00 0.00 0.00 4.00
1320 9234 1.836802 GAGAAAGAGAGGGCAGGTCAT 59.163 52.381 0.00 0.00 0.00 3.06
1430 9346 6.450545 CATTCTTTTTCTTCCACCTTCTTCC 58.549 40.000 0.00 0.00 0.00 3.46
1457 9373 2.039879 TGATCATGATGAGGCAGGATGG 59.960 50.000 14.30 0.00 39.17 3.51
1662 9580 1.748879 GGCCGGAAATGCTGCAGTA 60.749 57.895 16.64 12.13 0.00 2.74
1690 9609 3.077359 GCCAGATACTCTGCTTTGTGTT 58.923 45.455 0.00 0.00 42.98 3.32
1693 9612 4.470462 CAGATACTCTGCTTTGTGTTTGC 58.530 43.478 0.00 0.00 37.72 3.68
1699 9620 0.660488 TGCTTTGTGTTTGCGACGAT 59.340 45.000 0.00 0.00 0.00 3.73
1762 9683 1.134220 ACAGTTTTGCTCAGGACGGAA 60.134 47.619 0.00 0.00 0.00 4.30
1810 9731 1.739466 CAGGGACATCGAAATGGTGTG 59.261 52.381 0.00 0.00 37.19 3.82
1890 9811 3.503748 AGGCGCTCCTGCATATTTATTTC 59.496 43.478 7.64 0.00 42.34 2.17
1927 9848 8.146053 ACCAGGCACATATAATAGCTTATGTA 57.854 34.615 8.16 0.00 37.02 2.29
1956 11418 6.452872 GCAAAATTGAACTTAGCATAAGCACG 60.453 38.462 0.00 0.00 45.49 5.34
2010 11756 4.813027 TCAAGAATCAGGAAGCATTTTGC 58.187 39.130 0.00 0.00 45.46 3.68
2011 11757 3.881937 AGAATCAGGAAGCATTTTGCC 57.118 42.857 0.00 0.00 46.52 4.52
2013 11759 3.194968 AGAATCAGGAAGCATTTTGCCTG 59.805 43.478 0.00 0.00 46.52 4.85
2014 11760 1.259609 TCAGGAAGCATTTTGCCTGG 58.740 50.000 0.00 0.00 46.52 4.45
2015 11761 0.248289 CAGGAAGCATTTTGCCTGGG 59.752 55.000 0.00 0.00 46.52 4.45
2016 11762 0.114954 AGGAAGCATTTTGCCTGGGA 59.885 50.000 0.00 0.00 46.52 4.37
2018 11764 1.347378 GGAAGCATTTTGCCTGGGAAA 59.653 47.619 9.49 9.49 46.52 3.13
2019 11765 2.613725 GGAAGCATTTTGCCTGGGAAAG 60.614 50.000 13.20 4.68 46.52 2.62
2021 11767 2.449920 AGCATTTTGCCTGGGAAAGGG 61.450 52.381 13.20 10.58 46.52 3.95
2029 11775 2.206576 CCTGGGAAAGGGAGTTGAAG 57.793 55.000 0.00 0.00 43.15 3.02
2034 11933 2.043115 GGGAAAGGGAGTTGAAGGGAAT 59.957 50.000 0.00 0.00 0.00 3.01
2039 11938 5.860648 AAGGGAGTTGAAGGGAATAGAAA 57.139 39.130 0.00 0.00 0.00 2.52
2044 11943 5.877564 GGAGTTGAAGGGAATAGAAAGACAG 59.122 44.000 0.00 0.00 0.00 3.51
2046 11945 4.222124 TGAAGGGAATAGAAAGACAGGC 57.778 45.455 0.00 0.00 0.00 4.85
2060 11959 2.624838 AGACAGGCCAACAAAATGACTG 59.375 45.455 5.01 0.00 33.86 3.51
2085 11984 6.225981 AGGAACAAGAGCTTGACAATTTTT 57.774 33.333 16.47 0.00 42.93 1.94
2201 12100 3.008049 ACTGACCCTTGACAAGATACCAC 59.992 47.826 16.99 3.02 0.00 4.16
2227 12126 8.099537 CAGCTAAGACTCCCATATCAAACATAT 58.900 37.037 0.00 0.00 0.00 1.78
2267 12166 5.420421 TGAGAACCACCACAAAAAGATCAAA 59.580 36.000 0.00 0.00 0.00 2.69
2280 12179 8.260114 ACAAAAAGATCAAACTCAACTTCCATT 58.740 29.630 0.00 0.00 0.00 3.16
2290 12189 2.552315 TCAACTTCCATTCTTCAACGGC 59.448 45.455 0.00 0.00 0.00 5.68
2340 12239 1.202651 ACGTCCTGCTTAACTTGCTGT 60.203 47.619 0.00 0.00 0.00 4.40
2356 12255 0.595095 CTGTTCTTGCTTCAGCCACC 59.405 55.000 0.00 0.00 41.18 4.61
2357 12256 0.106769 TGTTCTTGCTTCAGCCACCA 60.107 50.000 0.00 0.00 41.18 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.209410 GTGGGAAGGCATTGTCTATCAG 58.791 50.000 0.00 0.00 0.00 2.90
2 3 2.158957 TCGTGGGAAGGCATTGTCTATC 60.159 50.000 0.00 0.00 0.00 2.08
4 5 1.271856 TCGTGGGAAGGCATTGTCTA 58.728 50.000 0.00 0.00 0.00 2.59
5 6 0.620556 ATCGTGGGAAGGCATTGTCT 59.379 50.000 0.00 0.00 0.00 3.41
6 7 0.734889 CATCGTGGGAAGGCATTGTC 59.265 55.000 0.00 0.00 0.00 3.18
7 8 1.315257 GCATCGTGGGAAGGCATTGT 61.315 55.000 0.00 0.00 0.00 2.71
8 9 1.434696 GCATCGTGGGAAGGCATTG 59.565 57.895 0.00 0.00 0.00 2.82
9 10 2.114670 CGCATCGTGGGAAGGCATT 61.115 57.895 0.00 0.00 31.21 3.56
10 11 2.514592 CGCATCGTGGGAAGGCAT 60.515 61.111 0.00 0.00 31.21 4.40
11 12 4.776322 CCGCATCGTGGGAAGGCA 62.776 66.667 4.14 0.00 31.21 4.75
18 19 1.312371 ATTTGGAACCCGCATCGTGG 61.312 55.000 0.00 0.00 0.00 4.94
19 20 1.374560 TATTTGGAACCCGCATCGTG 58.625 50.000 0.00 0.00 0.00 4.35
20 21 2.341846 ATATTTGGAACCCGCATCGT 57.658 45.000 0.00 0.00 0.00 3.73
21 22 2.031157 GGAATATTTGGAACCCGCATCG 60.031 50.000 0.00 0.00 0.00 3.84
22 23 2.955660 TGGAATATTTGGAACCCGCATC 59.044 45.455 0.00 0.00 0.00 3.91
23 24 3.025322 TGGAATATTTGGAACCCGCAT 57.975 42.857 0.00 0.00 0.00 4.73
24 25 2.494073 GTTGGAATATTTGGAACCCGCA 59.506 45.455 0.00 0.00 0.00 5.69
25 26 2.159156 GGTTGGAATATTTGGAACCCGC 60.159 50.000 10.84 0.00 31.57 6.13
26 27 3.130340 CAGGTTGGAATATTTGGAACCCG 59.870 47.826 15.45 6.75 37.39 5.28
27 28 3.450817 CCAGGTTGGAATATTTGGAACCC 59.549 47.826 15.45 2.33 40.96 4.11
28 29 4.349365 TCCAGGTTGGAATATTTGGAACC 58.651 43.478 12.86 12.86 45.00 3.62
41 42 0.960364 CCGGTTCACATCCAGGTTGG 60.960 60.000 2.45 0.00 39.43 3.77
42 43 1.586154 GCCGGTTCACATCCAGGTTG 61.586 60.000 1.90 0.00 0.00 3.77
43 44 1.303317 GCCGGTTCACATCCAGGTT 60.303 57.895 1.90 0.00 0.00 3.50
44 45 2.351276 GCCGGTTCACATCCAGGT 59.649 61.111 1.90 0.00 0.00 4.00
45 46 2.819595 CGCCGGTTCACATCCAGG 60.820 66.667 1.90 0.00 0.00 4.45
46 47 1.811266 CTCGCCGGTTCACATCCAG 60.811 63.158 1.90 0.00 0.00 3.86
47 48 2.264480 CTCGCCGGTTCACATCCA 59.736 61.111 1.90 0.00 0.00 3.41
48 49 3.195698 GCTCGCCGGTTCACATCC 61.196 66.667 1.90 0.00 0.00 3.51
49 50 2.125512 AGCTCGCCGGTTCACATC 60.126 61.111 1.90 0.00 0.00 3.06
50 51 2.125512 GAGCTCGCCGGTTCACAT 60.126 61.111 1.90 0.00 0.00 3.21
51 52 4.373116 GGAGCTCGCCGGTTCACA 62.373 66.667 7.83 0.00 0.00 3.58
52 53 4.373116 TGGAGCTCGCCGGTTCAC 62.373 66.667 7.83 0.00 0.00 3.18
53 54 4.373116 GTGGAGCTCGCCGGTTCA 62.373 66.667 7.83 0.00 0.00 3.18
54 55 3.991536 GAGTGGAGCTCGCCGGTTC 62.992 68.421 7.83 0.00 34.13 3.62
55 56 4.070552 GAGTGGAGCTCGCCGGTT 62.071 66.667 7.83 0.00 34.13 4.44
62 63 2.183046 GACCTGCGAGTGGAGCTC 59.817 66.667 4.71 4.71 40.77 4.09
63 64 2.283532 AGACCTGCGAGTGGAGCT 60.284 61.111 0.00 0.00 35.28 4.09
64 65 2.183046 GAGACCTGCGAGTGGAGC 59.817 66.667 0.00 0.00 31.08 4.70
65 66 2.888863 GGAGACCTGCGAGTGGAG 59.111 66.667 0.00 0.00 0.00 3.86
81 82 1.083144 GCGTCCGTATACTCGTCGG 60.083 63.158 0.56 0.00 44.76 4.79
82 83 1.083144 GGCGTCCGTATACTCGTCG 60.083 63.158 0.56 2.27 0.00 5.12
83 84 1.281049 GGGCGTCCGTATACTCGTC 59.719 63.158 0.00 4.90 0.00 4.20
84 85 1.451927 TGGGCGTCCGTATACTCGT 60.452 57.895 0.00 0.00 35.24 4.18
85 86 1.009222 GTGGGCGTCCGTATACTCG 60.009 63.158 0.00 4.71 35.24 4.18
86 87 0.248784 GTGTGGGCGTCCGTATACTC 60.249 60.000 0.00 0.00 35.24 2.59
87 88 0.966875 TGTGTGGGCGTCCGTATACT 60.967 55.000 0.00 0.00 35.24 2.12
88 89 0.103572 ATGTGTGGGCGTCCGTATAC 59.896 55.000 0.00 0.00 35.24 1.47
89 90 1.337703 GTATGTGTGGGCGTCCGTATA 59.662 52.381 0.00 0.00 35.24 1.47
90 91 0.103572 GTATGTGTGGGCGTCCGTAT 59.896 55.000 0.00 0.00 35.24 3.06
91 92 1.512230 GTATGTGTGGGCGTCCGTA 59.488 57.895 0.00 0.00 35.24 4.02
92 93 2.263540 GTATGTGTGGGCGTCCGT 59.736 61.111 0.00 0.00 35.24 4.69
93 94 2.510691 GGTATGTGTGGGCGTCCG 60.511 66.667 0.00 0.00 35.24 4.79
94 95 0.322187 AAAGGTATGTGTGGGCGTCC 60.322 55.000 0.00 0.00 0.00 4.79
95 96 1.084289 GAAAGGTATGTGTGGGCGTC 58.916 55.000 0.00 0.00 0.00 5.19
96 97 0.398696 TGAAAGGTATGTGTGGGCGT 59.601 50.000 0.00 0.00 0.00 5.68
97 98 1.670811 GATGAAAGGTATGTGTGGGCG 59.329 52.381 0.00 0.00 0.00 6.13
98 99 3.004752 AGATGAAAGGTATGTGTGGGC 57.995 47.619 0.00 0.00 0.00 5.36
99 100 4.588899 TGAAGATGAAAGGTATGTGTGGG 58.411 43.478 0.00 0.00 0.00 4.61
100 101 5.449588 GCATGAAGATGAAAGGTATGTGTGG 60.450 44.000 0.00 0.00 0.00 4.17
101 102 5.356190 AGCATGAAGATGAAAGGTATGTGTG 59.644 40.000 0.00 0.00 0.00 3.82
102 103 5.503927 AGCATGAAGATGAAAGGTATGTGT 58.496 37.500 0.00 0.00 0.00 3.72
103 104 5.587443 TGAGCATGAAGATGAAAGGTATGTG 59.413 40.000 0.00 0.00 0.00 3.21
104 105 5.748402 TGAGCATGAAGATGAAAGGTATGT 58.252 37.500 0.00 0.00 0.00 2.29
105 106 6.879276 ATGAGCATGAAGATGAAAGGTATG 57.121 37.500 0.00 0.00 0.00 2.39
106 107 7.743749 AGTATGAGCATGAAGATGAAAGGTAT 58.256 34.615 0.00 0.00 0.00 2.73
107 108 7.129457 AGTATGAGCATGAAGATGAAAGGTA 57.871 36.000 0.00 0.00 0.00 3.08
108 109 5.999044 AGTATGAGCATGAAGATGAAAGGT 58.001 37.500 0.00 0.00 0.00 3.50
109 110 6.318144 ACAAGTATGAGCATGAAGATGAAAGG 59.682 38.462 0.00 0.00 0.00 3.11
110 111 7.280428 AGACAAGTATGAGCATGAAGATGAAAG 59.720 37.037 0.00 0.00 0.00 2.62
111 112 7.108194 AGACAAGTATGAGCATGAAGATGAAA 58.892 34.615 0.00 0.00 0.00 2.69
112 113 6.647229 AGACAAGTATGAGCATGAAGATGAA 58.353 36.000 0.00 0.00 0.00 2.57
113 114 6.231258 AGACAAGTATGAGCATGAAGATGA 57.769 37.500 0.00 0.00 0.00 2.92
114 115 6.537660 TGAAGACAAGTATGAGCATGAAGATG 59.462 38.462 0.00 0.00 0.00 2.90
115 116 6.647229 TGAAGACAAGTATGAGCATGAAGAT 58.353 36.000 0.00 0.00 0.00 2.40
116 117 6.041423 TGAAGACAAGTATGAGCATGAAGA 57.959 37.500 0.00 0.00 0.00 2.87
117 118 6.762187 AGATGAAGACAAGTATGAGCATGAAG 59.238 38.462 0.00 0.00 0.00 3.02
118 119 6.647229 AGATGAAGACAAGTATGAGCATGAA 58.353 36.000 0.00 0.00 0.00 2.57
119 120 6.231258 AGATGAAGACAAGTATGAGCATGA 57.769 37.500 0.00 0.00 0.00 3.07
120 121 6.537660 TGAAGATGAAGACAAGTATGAGCATG 59.462 38.462 0.00 0.00 0.00 4.06
121 122 6.647229 TGAAGATGAAGACAAGTATGAGCAT 58.353 36.000 0.00 0.00 0.00 3.79
122 123 6.041423 TGAAGATGAAGACAAGTATGAGCA 57.959 37.500 0.00 0.00 0.00 4.26
123 124 6.974932 TTGAAGATGAAGACAAGTATGAGC 57.025 37.500 0.00 0.00 0.00 4.26
124 125 7.118825 TGCTTTGAAGATGAAGACAAGTATGAG 59.881 37.037 0.00 0.00 0.00 2.90
125 126 6.936335 TGCTTTGAAGATGAAGACAAGTATGA 59.064 34.615 0.00 0.00 0.00 2.15
126 127 7.118825 TCTGCTTTGAAGATGAAGACAAGTATG 59.881 37.037 0.00 0.00 0.00 2.39
127 128 7.164122 TCTGCTTTGAAGATGAAGACAAGTAT 58.836 34.615 0.00 0.00 0.00 2.12
128 129 6.524734 TCTGCTTTGAAGATGAAGACAAGTA 58.475 36.000 0.00 0.00 0.00 2.24
129 130 5.371526 TCTGCTTTGAAGATGAAGACAAGT 58.628 37.500 0.00 0.00 0.00 3.16
130 131 5.936686 TCTGCTTTGAAGATGAAGACAAG 57.063 39.130 0.00 0.00 0.00 3.16
131 132 7.984422 TTATCTGCTTTGAAGATGAAGACAA 57.016 32.000 0.00 0.00 35.92 3.18
132 133 7.984422 TTTATCTGCTTTGAAGATGAAGACA 57.016 32.000 0.00 0.00 35.92 3.41
133 134 9.122613 GTTTTTATCTGCTTTGAAGATGAAGAC 57.877 33.333 0.00 0.00 35.92 3.01
134 135 9.071276 AGTTTTTATCTGCTTTGAAGATGAAGA 57.929 29.630 0.00 0.00 35.92 2.87
135 136 9.339492 GAGTTTTTATCTGCTTTGAAGATGAAG 57.661 33.333 0.00 0.00 35.92 3.02
136 137 8.017373 CGAGTTTTTATCTGCTTTGAAGATGAA 58.983 33.333 0.00 0.00 35.92 2.57
137 138 7.521529 CGAGTTTTTATCTGCTTTGAAGATGA 58.478 34.615 0.00 0.00 35.92 2.92
138 139 6.250104 GCGAGTTTTTATCTGCTTTGAAGATG 59.750 38.462 0.00 0.00 35.92 2.90
139 140 6.317857 GCGAGTTTTTATCTGCTTTGAAGAT 58.682 36.000 0.00 0.00 38.03 2.40
140 141 5.614668 CGCGAGTTTTTATCTGCTTTGAAGA 60.615 40.000 0.00 0.00 0.00 2.87
141 142 4.551126 CGCGAGTTTTTATCTGCTTTGAAG 59.449 41.667 0.00 0.00 0.00 3.02
142 143 4.463209 CGCGAGTTTTTATCTGCTTTGAA 58.537 39.130 0.00 0.00 0.00 2.69
143 144 3.120338 CCGCGAGTTTTTATCTGCTTTGA 60.120 43.478 8.23 0.00 0.00 2.69
144 145 3.163594 CCGCGAGTTTTTATCTGCTTTG 58.836 45.455 8.23 0.00 0.00 2.77
145 146 2.812011 ACCGCGAGTTTTTATCTGCTTT 59.188 40.909 8.23 0.00 0.00 3.51
146 147 2.159627 CACCGCGAGTTTTTATCTGCTT 59.840 45.455 8.23 0.00 0.00 3.91
147 148 1.732259 CACCGCGAGTTTTTATCTGCT 59.268 47.619 8.23 0.00 0.00 4.24
148 149 1.463444 ACACCGCGAGTTTTTATCTGC 59.537 47.619 8.23 0.00 0.00 4.26
149 150 2.093783 GGACACCGCGAGTTTTTATCTG 59.906 50.000 8.23 0.00 0.00 2.90
150 151 2.344025 GGACACCGCGAGTTTTTATCT 58.656 47.619 8.23 0.00 0.00 1.98
151 152 1.395954 GGGACACCGCGAGTTTTTATC 59.604 52.381 8.23 0.00 0.00 1.75
152 153 1.445871 GGGACACCGCGAGTTTTTAT 58.554 50.000 8.23 0.00 0.00 1.40
153 154 0.603439 GGGGACACCGCGAGTTTTTA 60.603 55.000 8.23 0.00 37.78 1.52
154 155 1.895231 GGGGACACCGCGAGTTTTT 60.895 57.895 8.23 0.00 37.78 1.94
155 156 2.281276 GGGGACACCGCGAGTTTT 60.281 61.111 8.23 0.00 37.78 2.43
164 165 2.946172 AAACGAACACCGGGGACACC 62.946 60.000 12.96 0.00 43.93 4.16
165 166 1.096967 AAAACGAACACCGGGGACAC 61.097 55.000 12.96 0.00 43.93 3.67
166 167 1.096386 CAAAACGAACACCGGGGACA 61.096 55.000 12.96 0.00 43.93 4.02
167 168 0.814812 TCAAAACGAACACCGGGGAC 60.815 55.000 12.96 2.53 43.93 4.46
168 169 0.814812 GTCAAAACGAACACCGGGGA 60.815 55.000 12.96 0.00 43.93 4.81
169 170 1.650363 GTCAAAACGAACACCGGGG 59.350 57.895 0.00 0.00 43.93 5.73
186 187 5.368256 ACAAGTAAGACGTCTAACATCGT 57.632 39.130 20.39 9.39 43.00 3.73
187 188 5.002282 CGAACAAGTAAGACGTCTAACATCG 59.998 44.000 20.39 17.18 0.00 3.84
188 189 5.285607 CCGAACAAGTAAGACGTCTAACATC 59.714 44.000 20.39 9.98 0.00 3.06
189 190 5.159209 CCGAACAAGTAAGACGTCTAACAT 58.841 41.667 20.39 5.51 0.00 2.71
190 191 4.036734 ACCGAACAAGTAAGACGTCTAACA 59.963 41.667 20.39 4.30 0.00 2.41
191 192 4.540824 ACCGAACAAGTAAGACGTCTAAC 58.459 43.478 20.39 3.71 0.00 2.34
192 193 4.320494 GGACCGAACAAGTAAGACGTCTAA 60.320 45.833 20.39 0.00 0.00 2.10
193 194 3.189287 GGACCGAACAAGTAAGACGTCTA 59.811 47.826 20.39 4.54 0.00 2.59
194 195 2.030451 GGACCGAACAAGTAAGACGTCT 60.030 50.000 13.58 13.58 0.00 4.18
195 196 2.323059 GGACCGAACAAGTAAGACGTC 58.677 52.381 7.70 7.70 0.00 4.34
196 197 1.335324 CGGACCGAACAAGTAAGACGT 60.335 52.381 8.64 0.00 0.00 4.34
197 198 1.334054 CGGACCGAACAAGTAAGACG 58.666 55.000 8.64 0.00 0.00 4.18
198 199 1.066136 GCGGACCGAACAAGTAAGAC 58.934 55.000 20.50 0.00 0.00 3.01
199 200 0.037975 GGCGGACCGAACAAGTAAGA 60.038 55.000 20.50 0.00 0.00 2.10
200 201 0.037605 AGGCGGACCGAACAAGTAAG 60.038 55.000 20.50 0.00 42.76 2.34
201 202 0.037975 GAGGCGGACCGAACAAGTAA 60.038 55.000 20.50 0.00 42.76 2.24
202 203 0.896940 AGAGGCGGACCGAACAAGTA 60.897 55.000 20.50 0.00 42.76 2.24
203 204 2.156051 GAGAGGCGGACCGAACAAGT 62.156 60.000 20.50 0.00 42.76 3.16
204 205 1.446272 GAGAGGCGGACCGAACAAG 60.446 63.158 20.50 0.00 42.76 3.16
205 206 2.654877 GAGAGGCGGACCGAACAA 59.345 61.111 20.50 0.00 42.76 2.83
206 207 3.379445 GGAGAGGCGGACCGAACA 61.379 66.667 20.50 0.00 42.76 3.18
207 208 3.069318 AGGAGAGGCGGACCGAAC 61.069 66.667 20.50 9.68 42.76 3.95
208 209 3.068691 CAGGAGAGGCGGACCGAA 61.069 66.667 20.50 0.00 42.76 4.30
209 210 3.881019 AACAGGAGAGGCGGACCGA 62.881 63.158 20.50 0.00 42.76 4.69
210 211 3.358076 GAACAGGAGAGGCGGACCG 62.358 68.421 10.29 10.29 42.76 4.79
211 212 2.579738 GAACAGGAGAGGCGGACC 59.420 66.667 0.00 0.00 0.00 4.46
212 213 2.182030 CGAACAGGAGAGGCGGAC 59.818 66.667 0.00 0.00 0.00 4.79
213 214 3.068691 CCGAACAGGAGAGGCGGA 61.069 66.667 0.00 0.00 44.43 5.54
214 215 4.148825 CCCGAACAGGAGAGGCGG 62.149 72.222 0.00 0.00 45.00 6.13
215 216 4.148825 CCCCGAACAGGAGAGGCG 62.149 72.222 0.00 0.00 45.00 5.52
216 217 4.475135 GCCCCGAACAGGAGAGGC 62.475 72.222 0.00 0.00 45.00 4.70
217 218 1.842381 AAAGCCCCGAACAGGAGAGG 61.842 60.000 0.00 0.00 45.00 3.69
218 219 0.674895 CAAAGCCCCGAACAGGAGAG 60.675 60.000 0.00 0.00 45.00 3.20
219 220 1.374947 CAAAGCCCCGAACAGGAGA 59.625 57.895 0.00 0.00 45.00 3.71
220 221 1.073199 ACAAAGCCCCGAACAGGAG 59.927 57.895 0.00 0.00 45.00 3.69
221 222 1.228124 CACAAAGCCCCGAACAGGA 60.228 57.895 0.00 0.00 45.00 3.86
222 223 1.228124 TCACAAAGCCCCGAACAGG 60.228 57.895 0.00 0.00 40.63 4.00
223 224 0.535102 ACTCACAAAGCCCCGAACAG 60.535 55.000 0.00 0.00 0.00 3.16
224 225 0.534203 GACTCACAAAGCCCCGAACA 60.534 55.000 0.00 0.00 0.00 3.18
225 226 0.250338 AGACTCACAAAGCCCCGAAC 60.250 55.000 0.00 0.00 0.00 3.95
226 227 1.275291 CTAGACTCACAAAGCCCCGAA 59.725 52.381 0.00 0.00 0.00 4.30
227 228 0.895530 CTAGACTCACAAAGCCCCGA 59.104 55.000 0.00 0.00 0.00 5.14
228 229 0.741221 GCTAGACTCACAAAGCCCCG 60.741 60.000 0.00 0.00 0.00 5.73
229 230 0.615850 AGCTAGACTCACAAAGCCCC 59.384 55.000 0.00 0.00 35.54 5.80
230 231 1.002544 ACAGCTAGACTCACAAAGCCC 59.997 52.381 0.00 0.00 35.54 5.19
231 232 2.072298 CACAGCTAGACTCACAAAGCC 58.928 52.381 0.00 0.00 35.54 4.35
232 233 2.478134 CACACAGCTAGACTCACAAAGC 59.522 50.000 0.00 0.00 35.16 3.51
233 234 3.062763 CCACACAGCTAGACTCACAAAG 58.937 50.000 0.00 0.00 0.00 2.77
234 235 2.434336 ACCACACAGCTAGACTCACAAA 59.566 45.455 0.00 0.00 0.00 2.83
235 236 2.039418 ACCACACAGCTAGACTCACAA 58.961 47.619 0.00 0.00 0.00 3.33
236 237 1.704641 ACCACACAGCTAGACTCACA 58.295 50.000 0.00 0.00 0.00 3.58
237 238 2.821991 AACCACACAGCTAGACTCAC 57.178 50.000 0.00 0.00 0.00 3.51
238 239 2.037251 GGAAACCACACAGCTAGACTCA 59.963 50.000 0.00 0.00 0.00 3.41
239 240 2.300437 AGGAAACCACACAGCTAGACTC 59.700 50.000 0.00 0.00 0.00 3.36
240 241 2.300437 GAGGAAACCACACAGCTAGACT 59.700 50.000 0.00 0.00 0.00 3.24
241 242 2.300437 AGAGGAAACCACACAGCTAGAC 59.700 50.000 0.00 0.00 0.00 2.59
242 243 2.300152 CAGAGGAAACCACACAGCTAGA 59.700 50.000 0.00 0.00 0.00 2.43
243 244 2.300152 TCAGAGGAAACCACACAGCTAG 59.700 50.000 0.00 0.00 0.00 3.42
244 245 2.037251 GTCAGAGGAAACCACACAGCTA 59.963 50.000 0.00 0.00 0.00 3.32
245 246 1.131638 TCAGAGGAAACCACACAGCT 58.868 50.000 0.00 0.00 0.00 4.24
246 247 1.230324 GTCAGAGGAAACCACACAGC 58.770 55.000 0.00 0.00 0.00 4.40
247 248 1.873903 CGGTCAGAGGAAACCACACAG 60.874 57.143 0.00 0.00 35.13 3.66
248 249 0.105964 CGGTCAGAGGAAACCACACA 59.894 55.000 0.00 0.00 35.13 3.72
249 250 0.602905 CCGGTCAGAGGAAACCACAC 60.603 60.000 0.00 0.00 35.13 3.82
250 251 1.752198 CCGGTCAGAGGAAACCACA 59.248 57.895 0.00 0.00 35.13 4.17
251 252 1.003718 CCCGGTCAGAGGAAACCAC 60.004 63.158 0.00 0.00 35.13 4.16
252 253 0.546747 ATCCCGGTCAGAGGAAACCA 60.547 55.000 0.00 0.00 35.30 3.67
253 254 0.107654 CATCCCGGTCAGAGGAAACC 60.108 60.000 0.00 0.00 35.30 3.27
254 255 0.902531 TCATCCCGGTCAGAGGAAAC 59.097 55.000 0.00 0.00 35.30 2.78
255 256 1.195115 CTCATCCCGGTCAGAGGAAA 58.805 55.000 0.00 0.00 35.30 3.13
256 257 1.330655 GCTCATCCCGGTCAGAGGAA 61.331 60.000 13.90 0.00 35.30 3.36
257 258 1.758514 GCTCATCCCGGTCAGAGGA 60.759 63.158 13.90 5.17 36.36 3.71
258 259 1.406065 ATGCTCATCCCGGTCAGAGG 61.406 60.000 13.90 1.11 0.00 3.69
259 260 0.033228 GATGCTCATCCCGGTCAGAG 59.967 60.000 0.00 5.26 31.76 3.35
260 261 0.397675 AGATGCTCATCCCGGTCAGA 60.398 55.000 0.00 0.00 38.58 3.27
261 262 0.033228 GAGATGCTCATCCCGGTCAG 59.967 60.000 0.00 0.00 38.58 3.51
262 263 0.397675 AGAGATGCTCATCCCGGTCA 60.398 55.000 0.00 0.00 38.58 4.02
263 264 0.755686 AAGAGATGCTCATCCCGGTC 59.244 55.000 0.00 0.00 38.58 4.79
264 265 0.467384 CAAGAGATGCTCATCCCGGT 59.533 55.000 0.00 0.00 38.58 5.28
265 266 0.467384 ACAAGAGATGCTCATCCCGG 59.533 55.000 6.27 0.00 38.58 5.73
266 267 1.539929 GGACAAGAGATGCTCATCCCG 60.540 57.143 6.27 0.00 38.58 5.14
267 268 1.202746 GGGACAAGAGATGCTCATCCC 60.203 57.143 12.67 12.67 40.02 3.85
268 269 1.767681 AGGGACAAGAGATGCTCATCC 59.232 52.381 6.27 0.00 38.58 3.51
269 270 2.224257 GGAGGGACAAGAGATGCTCATC 60.224 54.545 1.75 1.75 38.09 2.92
270 271 1.767681 GGAGGGACAAGAGATGCTCAT 59.232 52.381 0.00 0.00 32.06 2.90
271 272 1.198713 GGAGGGACAAGAGATGCTCA 58.801 55.000 0.00 0.00 32.06 4.26
272 273 0.103937 CGGAGGGACAAGAGATGCTC 59.896 60.000 0.00 0.00 0.00 4.26
273 274 1.965754 GCGGAGGGACAAGAGATGCT 61.966 60.000 0.00 0.00 0.00 3.79
274 275 1.522580 GCGGAGGGACAAGAGATGC 60.523 63.158 0.00 0.00 0.00 3.91
275 276 0.103937 GAGCGGAGGGACAAGAGATG 59.896 60.000 0.00 0.00 0.00 2.90
276 277 1.045911 GGAGCGGAGGGACAAGAGAT 61.046 60.000 0.00 0.00 0.00 2.75
277 278 1.682684 GGAGCGGAGGGACAAGAGA 60.683 63.158 0.00 0.00 0.00 3.10
278 279 2.896443 GGAGCGGAGGGACAAGAG 59.104 66.667 0.00 0.00 0.00 2.85
279 280 3.068691 CGGAGCGGAGGGACAAGA 61.069 66.667 0.00 0.00 0.00 3.02
291 292 0.663153 GTGAACATAATGCCCGGAGC 59.337 55.000 0.73 5.29 44.14 4.70
292 293 0.937304 CGTGAACATAATGCCCGGAG 59.063 55.000 0.73 0.00 0.00 4.63
293 294 0.250793 ACGTGAACATAATGCCCGGA 59.749 50.000 0.73 0.00 0.00 5.14
294 295 0.655733 GACGTGAACATAATGCCCGG 59.344 55.000 0.00 0.00 0.00 5.73
295 296 1.593006 GAGACGTGAACATAATGCCCG 59.407 52.381 0.00 0.00 0.00 6.13
296 297 1.940613 GGAGACGTGAACATAATGCCC 59.059 52.381 0.00 0.00 0.00 5.36
297 298 2.906354 AGGAGACGTGAACATAATGCC 58.094 47.619 0.00 0.00 0.00 4.40
298 299 3.485877 GCAAGGAGACGTGAACATAATGC 60.486 47.826 0.00 0.00 42.98 3.56
299 300 3.684305 TGCAAGGAGACGTGAACATAATG 59.316 43.478 0.00 0.00 42.98 1.90
300 301 3.937814 TGCAAGGAGACGTGAACATAAT 58.062 40.909 0.00 0.00 42.98 1.28
301 302 3.394674 TGCAAGGAGACGTGAACATAA 57.605 42.857 0.00 0.00 42.98 1.90
302 303 3.610040 ATGCAAGGAGACGTGAACATA 57.390 42.857 0.00 0.00 42.98 2.29
303 304 2.479566 ATGCAAGGAGACGTGAACAT 57.520 45.000 0.00 0.00 42.98 2.71
304 305 2.143122 GAATGCAAGGAGACGTGAACA 58.857 47.619 0.00 0.00 42.98 3.18
305 306 1.126846 CGAATGCAAGGAGACGTGAAC 59.873 52.381 0.00 0.00 42.98 3.18
306 307 1.270094 ACGAATGCAAGGAGACGTGAA 60.270 47.619 0.00 0.00 42.98 3.18
307 308 0.317160 ACGAATGCAAGGAGACGTGA 59.683 50.000 0.00 0.00 42.98 4.35
308 309 0.439985 CACGAATGCAAGGAGACGTG 59.560 55.000 0.00 0.00 43.10 4.49
309 310 0.033504 ACACGAATGCAAGGAGACGT 59.966 50.000 0.00 0.00 34.40 4.34
310 311 0.716108 GACACGAATGCAAGGAGACG 59.284 55.000 0.00 0.00 0.00 4.18
311 312 1.795768 TGACACGAATGCAAGGAGAC 58.204 50.000 0.00 0.00 0.00 3.36
312 313 2.289631 ACATGACACGAATGCAAGGAGA 60.290 45.455 0.00 0.00 0.00 3.71
313 314 2.079158 ACATGACACGAATGCAAGGAG 58.921 47.619 0.00 0.00 0.00 3.69
314 315 1.805943 CACATGACACGAATGCAAGGA 59.194 47.619 0.00 0.00 0.00 3.36
315 316 1.536766 ACACATGACACGAATGCAAGG 59.463 47.619 0.00 0.00 0.00 3.61
316 317 2.975193 CAACACATGACACGAATGCAAG 59.025 45.455 0.00 0.00 0.00 4.01
317 318 2.357323 ACAACACATGACACGAATGCAA 59.643 40.909 0.00 0.00 0.00 4.08
318 319 1.946081 ACAACACATGACACGAATGCA 59.054 42.857 0.00 0.00 0.00 3.96
319 320 2.686558 ACAACACATGACACGAATGC 57.313 45.000 0.00 0.00 0.00 3.56
320 321 4.631377 AGGATACAACACATGACACGAATG 59.369 41.667 0.00 0.00 41.41 2.67
321 322 4.832248 AGGATACAACACATGACACGAAT 58.168 39.130 0.00 0.00 41.41 3.34
322 323 4.265904 AGGATACAACACATGACACGAA 57.734 40.909 0.00 0.00 41.41 3.85
323 324 3.953712 AGGATACAACACATGACACGA 57.046 42.857 0.00 0.00 41.41 4.35
324 325 3.745975 ACAAGGATACAACACATGACACG 59.254 43.478 0.00 0.00 41.41 4.49
325 326 5.689383 AACAAGGATACAACACATGACAC 57.311 39.130 0.00 0.00 41.41 3.67
326 327 7.994425 ATAAACAAGGATACAACACATGACA 57.006 32.000 0.00 0.00 41.41 3.58
327 328 9.162764 AGTATAAACAAGGATACAACACATGAC 57.837 33.333 0.00 0.00 41.41 3.06
328 329 9.378551 GAGTATAAACAAGGATACAACACATGA 57.621 33.333 0.00 0.00 41.41 3.07
329 330 9.161629 TGAGTATAAACAAGGATACAACACATG 57.838 33.333 0.00 0.00 41.41 3.21
330 331 9.905713 ATGAGTATAAACAAGGATACAACACAT 57.094 29.630 0.00 0.00 41.41 3.21
331 332 9.733556 AATGAGTATAAACAAGGATACAACACA 57.266 29.630 0.00 0.00 41.41 3.72
340 341 9.753674 AGGAATCAAAATGAGTATAAACAAGGA 57.246 29.630 0.00 0.00 0.00 3.36
396 397 5.601582 TGTTTAACTTTCTTCGCGAATACG 58.398 37.500 23.67 11.28 42.93 3.06
397 398 5.503720 GCTGTTTAACTTTCTTCGCGAATAC 59.496 40.000 23.67 4.44 0.00 1.89
398 399 5.390145 GGCTGTTTAACTTTCTTCGCGAATA 60.390 40.000 23.67 13.05 0.00 1.75
399 400 4.464112 GCTGTTTAACTTTCTTCGCGAAT 58.536 39.130 23.67 8.92 0.00 3.34
400 401 3.303526 GGCTGTTTAACTTTCTTCGCGAA 60.304 43.478 22.01 22.01 0.00 4.70
401 402 2.222445 GGCTGTTTAACTTTCTTCGCGA 59.778 45.455 3.71 3.71 0.00 5.87
402 403 2.571206 GGCTGTTTAACTTTCTTCGCG 58.429 47.619 0.00 0.00 0.00 5.87
403 404 2.292292 TGGGCTGTTTAACTTTCTTCGC 59.708 45.455 0.00 0.00 0.00 4.70
404 405 4.561735 TTGGGCTGTTTAACTTTCTTCG 57.438 40.909 0.00 0.00 0.00 3.79
405 406 6.983890 TGAATTTGGGCTGTTTAACTTTCTTC 59.016 34.615 0.00 0.00 0.00 2.87
406 407 6.883744 TGAATTTGGGCTGTTTAACTTTCTT 58.116 32.000 0.00 0.00 0.00 2.52
407 408 6.478512 TGAATTTGGGCTGTTTAACTTTCT 57.521 33.333 0.00 0.00 0.00 2.52
408 409 7.546778 TTTGAATTTGGGCTGTTTAACTTTC 57.453 32.000 0.00 0.00 0.00 2.62
409 410 7.013178 CCATTTGAATTTGGGCTGTTTAACTTT 59.987 33.333 0.00 0.00 0.00 2.66
410 411 6.486320 CCATTTGAATTTGGGCTGTTTAACTT 59.514 34.615 0.00 0.00 0.00 2.66
411 412 5.997129 CCATTTGAATTTGGGCTGTTTAACT 59.003 36.000 0.00 0.00 0.00 2.24
412 413 5.762711 ACCATTTGAATTTGGGCTGTTTAAC 59.237 36.000 0.00 0.00 37.32 2.01
419 420 4.263025 GGAGAAACCATTTGAATTTGGGCT 60.263 41.667 0.00 0.00 37.32 5.19
420 421 4.002982 GGAGAAACCATTTGAATTTGGGC 58.997 43.478 0.00 0.00 37.32 5.36
424 425 5.366477 ACTGTGGGAGAAACCATTTGAATTT 59.634 36.000 0.00 0.00 43.59 1.82
440 441 3.495453 CGTCCCTTTAGAAAACTGTGGGA 60.495 47.826 0.00 0.00 39.66 4.37
441 442 2.812011 CGTCCCTTTAGAAAACTGTGGG 59.188 50.000 0.00 0.00 34.76 4.61
442 443 2.225727 GCGTCCCTTTAGAAAACTGTGG 59.774 50.000 0.00 0.00 0.00 4.17
443 444 2.096417 CGCGTCCCTTTAGAAAACTGTG 60.096 50.000 0.00 0.00 0.00 3.66
447 448 0.179233 CGCGCGTCCCTTTAGAAAAC 60.179 55.000 24.19 0.00 0.00 2.43
454 455 4.980805 TTGCTCGCGCGTCCCTTT 62.981 61.111 30.98 0.00 39.65 3.11
455 456 2.845752 TATTTGCTCGCGCGTCCCTT 62.846 55.000 30.98 13.74 39.65 3.95
480 485 4.864334 CTGGAGATGCACCGGGGC 62.864 72.222 25.59 25.59 0.00 5.80
481 486 4.181010 CCTGGAGATGCACCGGGG 62.181 72.222 6.32 0.84 46.89 5.73
483 488 1.976132 ATGTCCTGGAGATGCACCGG 61.976 60.000 5.41 0.00 0.00 5.28
484 489 0.812811 CATGTCCTGGAGATGCACCG 60.813 60.000 19.42 0.00 0.00 4.94
485 490 3.091318 CATGTCCTGGAGATGCACC 57.909 57.895 19.42 0.00 0.00 5.01
489 494 0.818445 GCCTGCATGTCCTGGAGATG 60.818 60.000 25.15 25.15 45.63 2.90
490 495 1.276859 TGCCTGCATGTCCTGGAGAT 61.277 55.000 0.00 0.00 45.63 2.75
491 496 1.491274 TTGCCTGCATGTCCTGGAGA 61.491 55.000 0.00 0.00 45.63 3.71
492 497 1.001764 TTGCCTGCATGTCCTGGAG 60.002 57.895 0.00 0.00 42.62 3.86
493 498 1.303561 GTTGCCTGCATGTCCTGGA 60.304 57.895 0.00 0.00 0.00 3.86
494 499 0.896940 AAGTTGCCTGCATGTCCTGG 60.897 55.000 0.00 0.00 0.00 4.45
495 500 0.963962 AAAGTTGCCTGCATGTCCTG 59.036 50.000 0.00 0.00 0.00 3.86
496 501 0.963962 CAAAGTTGCCTGCATGTCCT 59.036 50.000 0.00 0.00 0.00 3.85
497 502 0.961019 TCAAAGTTGCCTGCATGTCC 59.039 50.000 0.00 0.00 0.00 4.02
515 520 2.706339 AATGGACACATCTGCTCCTC 57.294 50.000 0.00 0.00 35.94 3.71
516 521 4.785346 AATAATGGACACATCTGCTCCT 57.215 40.909 0.00 0.00 35.94 3.69
517 522 4.449068 CGTAATAATGGACACATCTGCTCC 59.551 45.833 0.00 0.00 35.94 4.70
519 524 5.023533 ACGTAATAATGGACACATCTGCT 57.976 39.130 0.00 0.00 35.94 4.24
521 526 7.516785 GCAAGTACGTAATAATGGACACATCTG 60.517 40.741 0.00 0.00 35.94 2.90
522 527 6.479001 GCAAGTACGTAATAATGGACACATCT 59.521 38.462 0.00 0.00 35.94 2.90
523 528 6.479001 AGCAAGTACGTAATAATGGACACATC 59.521 38.462 0.00 0.00 35.94 3.06
524 529 6.346096 AGCAAGTACGTAATAATGGACACAT 58.654 36.000 0.00 0.00 39.54 3.21
525 530 5.726397 AGCAAGTACGTAATAATGGACACA 58.274 37.500 0.00 0.00 0.00 3.72
526 531 6.311935 TCAAGCAAGTACGTAATAATGGACAC 59.688 38.462 0.00 0.00 0.00 3.67
538 543 0.105964 TGCACCTCAAGCAAGTACGT 59.894 50.000 0.00 0.00 39.39 3.57
539 544 0.512952 GTGCACCTCAAGCAAGTACG 59.487 55.000 5.22 0.00 44.64 3.67
540 545 1.884235 AGTGCACCTCAAGCAAGTAC 58.116 50.000 14.63 0.00 44.64 2.73
541 546 2.158827 TCAAGTGCACCTCAAGCAAGTA 60.159 45.455 14.63 0.00 44.64 2.24
576 581 2.189257 CGCCATGGGAACGATGGA 59.811 61.111 15.13 0.00 39.76 3.41
598 603 2.070650 GGACCCCTGGATTAGGCGT 61.071 63.158 0.00 0.00 45.89 5.68
647 652 2.677508 GGAAGAGTCTGTCTGCCCT 58.322 57.895 0.00 0.00 45.08 5.19
870 8698 0.969917 TCTCAGTGAGGAGCTGGAGC 60.970 60.000 19.99 0.00 42.49 4.70
871 8699 0.817013 GTCTCAGTGAGGAGCTGGAG 59.183 60.000 19.99 0.00 34.84 3.86
872 8700 0.407528 AGTCTCAGTGAGGAGCTGGA 59.592 55.000 19.99 0.00 34.84 3.86
873 8701 0.531657 CAGTCTCAGTGAGGAGCTGG 59.468 60.000 19.99 7.49 36.39 4.85
993 8821 2.079158 CATGTCTTCGCCATCTTGTGT 58.921 47.619 0.00 0.00 0.00 3.72
1107 8935 4.041075 TCACTTACATTGAGCACAGGGTTA 59.959 41.667 0.00 0.00 0.00 2.85
1204 9061 2.874701 CCATGGATTTCTGTGACCGATC 59.125 50.000 5.56 0.00 0.00 3.69
1211 9068 3.698040 CCCTTTCTCCATGGATTTCTGTG 59.302 47.826 16.63 1.19 0.00 3.66
1222 9079 1.281925 ATCGCCACCCCTTTCTCCAT 61.282 55.000 0.00 0.00 0.00 3.41
1238 9095 0.463295 AGCACCATCAGCCTTGATCG 60.463 55.000 0.00 0.00 42.12 3.69
1317 9228 3.264922 TGGATCTCAGGCATCCTATGA 57.735 47.619 3.56 0.00 40.66 2.15
1320 9234 2.636403 CACATGGATCTCAGGCATCCTA 59.364 50.000 0.00 0.00 40.66 2.94
1430 9346 5.046520 TCCTGCCTCATCATGATCATCTAAG 60.047 44.000 4.86 1.41 0.00 2.18
1480 9396 2.698855 AGGAATCACATCTTGGGTCG 57.301 50.000 0.00 0.00 0.00 4.79
1690 9609 7.997107 AGTAGTTTCAATAATATCGTCGCAA 57.003 32.000 0.00 0.00 0.00 4.85
1693 9612 8.899776 GGTGTAGTAGTTTCAATAATATCGTCG 58.100 37.037 0.00 0.00 0.00 5.12
1741 9662 0.868406 CCGTCCTGAGCAAAACTGTC 59.132 55.000 0.00 0.00 0.00 3.51
1787 9708 1.271871 ACCATTTCGATGTCCCTGCAA 60.272 47.619 0.00 0.00 0.00 4.08
1890 9811 2.426738 TGTGCCTGGTTTTCAACTCTTG 59.573 45.455 0.00 0.00 0.00 3.02
1905 9826 9.658799 CTGTTACATAAGCTATTATATGTGCCT 57.341 33.333 15.87 0.00 41.52 4.75
1927 9848 7.116805 GCTTATGCTAAGTTCAATTTTGCTGTT 59.883 33.333 1.20 0.00 36.03 3.16
1984 11446 8.355169 GCAAAATGCTTCCTGATTCTTGATATA 58.645 33.333 0.00 0.00 40.96 0.86
1997 11743 0.114954 TCCCAGGCAAAATGCTTCCT 59.885 50.000 2.00 0.00 44.28 3.36
1999 11745 2.613725 CCTTTCCCAGGCAAAATGCTTC 60.614 50.000 2.00 0.00 44.28 3.86
2003 11749 1.551883 CTCCCTTTCCCAGGCAAAATG 59.448 52.381 0.00 0.00 42.29 2.32
2004 11750 1.149923 ACTCCCTTTCCCAGGCAAAAT 59.850 47.619 0.00 0.00 42.29 1.82
2009 11755 0.112412 TTCAACTCCCTTTCCCAGGC 59.888 55.000 0.00 0.00 42.29 4.85
2010 11756 1.272147 CCTTCAACTCCCTTTCCCAGG 60.272 57.143 0.00 0.00 43.49 4.45
2011 11757 1.272147 CCCTTCAACTCCCTTTCCCAG 60.272 57.143 0.00 0.00 0.00 4.45
2013 11759 1.073098 TCCCTTCAACTCCCTTTCCC 58.927 55.000 0.00 0.00 0.00 3.97
2014 11760 2.971901 TTCCCTTCAACTCCCTTTCC 57.028 50.000 0.00 0.00 0.00 3.13
2015 11761 5.437191 TCTATTCCCTTCAACTCCCTTTC 57.563 43.478 0.00 0.00 0.00 2.62
2016 11762 5.860648 TTCTATTCCCTTCAACTCCCTTT 57.139 39.130 0.00 0.00 0.00 3.11
2018 11764 5.045505 GTCTTTCTATTCCCTTCAACTCCCT 60.046 44.000 0.00 0.00 0.00 4.20
2019 11765 5.186942 GTCTTTCTATTCCCTTCAACTCCC 58.813 45.833 0.00 0.00 0.00 4.30
2021 11767 5.877564 CCTGTCTTTCTATTCCCTTCAACTC 59.122 44.000 0.00 0.00 0.00 3.01
2026 11772 3.054361 TGGCCTGTCTTTCTATTCCCTTC 60.054 47.826 3.32 0.00 0.00 3.46
2027 11773 2.919602 TGGCCTGTCTTTCTATTCCCTT 59.080 45.455 3.32 0.00 0.00 3.95
2029 11775 3.017442 GTTGGCCTGTCTTTCTATTCCC 58.983 50.000 3.32 0.00 0.00 3.97
2034 11933 5.009610 GTCATTTTGTTGGCCTGTCTTTCTA 59.990 40.000 3.32 0.00 0.00 2.10
2039 11938 2.624838 CAGTCATTTTGTTGGCCTGTCT 59.375 45.455 3.32 0.00 0.00 3.41
2044 11943 2.627699 TCCTTCAGTCATTTTGTTGGCC 59.372 45.455 0.00 0.00 0.00 5.36
2046 11945 5.261209 TGTTCCTTCAGTCATTTTGTTGG 57.739 39.130 0.00 0.00 0.00 3.77
2060 11959 5.444663 AATTGTCAAGCTCTTGTTCCTTC 57.555 39.130 9.20 0.00 41.16 3.46
2085 11984 3.181329 ACTGGTGGAAGATATGGTCACA 58.819 45.455 0.00 0.00 0.00 3.58
2201 12100 5.674525 TGTTTGATATGGGAGTCTTAGCTG 58.325 41.667 0.00 0.00 0.00 4.24
2227 12126 5.721480 TGGTTCTCATTCTGAGTCTTATCCA 59.279 40.000 4.21 0.00 44.58 3.41
2233 12132 3.007398 GTGGTGGTTCTCATTCTGAGTCT 59.993 47.826 4.21 0.00 44.58 3.24
2267 12166 3.815401 CCGTTGAAGAATGGAAGTTGAGT 59.185 43.478 0.00 0.00 40.35 3.41
2280 12179 2.668212 CGGGCAAGCCGTTGAAGA 60.668 61.111 4.80 0.00 35.46 2.87
2290 12189 1.135575 GCAGTTTGAATCTCGGGCAAG 60.136 52.381 0.00 0.00 0.00 4.01
2340 12239 0.823356 GGTGGTGGCTGAAGCAAGAA 60.823 55.000 4.43 0.00 44.36 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.