Multiple sequence alignment - TraesCS7B01G044600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G044600 chr7B 100.000 3492 0 0 1 3492 44254869 44258360 0.000000e+00 6449
1 TraesCS7B01G044600 chr7B 88.036 443 40 10 3055 3492 44271238 44271672 2.400000e-141 512
2 TraesCS7B01G044600 chr7B 82.456 513 75 7 862 1370 44268861 44269362 5.350000e-118 435
3 TraesCS7B01G044600 chr7B 76.471 816 152 26 1584 2379 43268842 43269637 1.170000e-109 407
4 TraesCS7B01G044600 chr7B 83.090 479 46 25 3020 3492 44292810 44293259 1.510000e-108 403
5 TraesCS7B01G044600 chr7B 84.112 214 28 3 1758 1971 43544774 43544981 5.910000e-48 202
6 TraesCS7B01G044600 chr7B 79.032 248 34 10 1581 1816 44270041 44270282 1.680000e-33 154
7 TraesCS7B01G044600 chr7B 82.065 184 27 2 1384 1561 43268604 43268787 6.040000e-33 152
8 TraesCS7B01G044600 chr7D 93.217 1150 61 8 1815 2964 92227957 92229089 0.000000e+00 1676
9 TraesCS7B01G044600 chr7D 90.193 1142 62 16 680 1810 92226669 92227771 0.000000e+00 1443
10 TraesCS7B01G044600 chr7D 91.892 481 33 6 3016 3492 92229367 92229845 0.000000e+00 667
11 TraesCS7B01G044600 chr7D 84.855 482 49 19 3016 3492 92237207 92237669 6.830000e-127 464
12 TraesCS7B01G044600 chr7D 75.874 572 98 26 1758 2315 92236090 92236635 4.470000e-64 255
13 TraesCS7B01G044600 chr7D 79.181 293 49 6 1045 1325 92170700 92170992 3.560000e-45 193
14 TraesCS7B01G044600 chr7A 92.857 1022 41 3 1035 2052 94376328 94377321 0.000000e+00 1454
15 TraesCS7B01G044600 chr7A 86.542 966 80 18 2048 2974 94382588 94383542 0.000000e+00 1018
16 TraesCS7B01G044600 chr7A 90.021 481 36 10 3016 3492 94383634 94384106 2.300000e-171 612
17 TraesCS7B01G044600 chr7A 78.595 897 140 30 1348 2199 94395936 94396825 2.370000e-151 545
18 TraesCS7B01G044600 chr7A 87.955 440 30 9 3055 3490 94399563 94399983 6.730000e-137 497
19 TraesCS7B01G044600 chr7A 80.330 666 76 24 671 1327 94395200 94395819 1.480000e-123 453
20 TraesCS7B01G044600 chr7A 81.305 567 81 15 1014 1557 93142159 93141595 1.490000e-118 436
21 TraesCS7B01G044600 chr7A 77.086 803 138 27 1595 2379 93141527 93140753 4.170000e-114 422
22 TraesCS7B01G044600 chr7A 80.380 316 22 19 725 1039 94373904 94374180 1.640000e-48 204
23 TraesCS7B01G044600 chr5D 76.849 1447 228 61 1014 2371 388337876 388336448 0.000000e+00 717
24 TraesCS7B01G044600 chr5D 86.310 168 22 1 1 168 236945431 236945597 7.700000e-42 182
25 TraesCS7B01G044600 chr5A 78.457 687 109 24 1014 1681 491375655 491374989 2.510000e-111 412
26 TraesCS7B01G044600 chrUn 80.443 542 93 9 1582 2118 342457809 342457276 5.430000e-108 401
27 TraesCS7B01G044600 chr4B 90.184 163 13 3 1 161 252980403 252980564 3.530000e-50 209
28 TraesCS7B01G044600 chr4B 85.093 161 23 1 1 161 11724672 11724513 2.790000e-36 163
29 TraesCS7B01G044600 chr2B 87.647 170 15 3 1 164 197510349 197510518 3.560000e-45 193
30 TraesCS7B01G044600 chr2B 88.199 161 17 1 1 161 400811446 400811604 1.280000e-44 191
31 TraesCS7B01G044600 chr1D 87.879 165 18 2 1 164 460919265 460919102 3.560000e-45 193
32 TraesCS7B01G044600 chr3D 88.199 161 17 2 1 161 573616442 573616600 1.280000e-44 191
33 TraesCS7B01G044600 chr1B 85.965 171 20 3 1 170 555623702 555623869 2.770000e-41 180
34 TraesCS7B01G044600 chr6A 84.242 165 23 3 1 164 600965021 600964859 1.300000e-34 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G044600 chr7B 44254869 44258360 3491 False 6449.000000 6449 100.000000 1 3492 1 chr7B.!!$F2 3491
1 TraesCS7B01G044600 chr7B 44268861 44271672 2811 False 367.000000 512 83.174667 862 3492 3 chr7B.!!$F5 2630
2 TraesCS7B01G044600 chr7B 43268604 43269637 1033 False 279.500000 407 79.268000 1384 2379 2 chr7B.!!$F4 995
3 TraesCS7B01G044600 chr7D 92226669 92229845 3176 False 1262.000000 1676 91.767333 680 3492 3 chr7D.!!$F2 2812
4 TraesCS7B01G044600 chr7D 92236090 92237669 1579 False 359.500000 464 80.364500 1758 3492 2 chr7D.!!$F3 1734
5 TraesCS7B01G044600 chr7A 94373904 94377321 3417 False 829.000000 1454 86.618500 725 2052 2 chr7A.!!$F1 1327
6 TraesCS7B01G044600 chr7A 94382588 94384106 1518 False 815.000000 1018 88.281500 2048 3492 2 chr7A.!!$F2 1444
7 TraesCS7B01G044600 chr7A 94395200 94399983 4783 False 498.333333 545 82.293333 671 3490 3 chr7A.!!$F3 2819
8 TraesCS7B01G044600 chr7A 93140753 93142159 1406 True 429.000000 436 79.195500 1014 2379 2 chr7A.!!$R1 1365
9 TraesCS7B01G044600 chr5D 388336448 388337876 1428 True 717.000000 717 76.849000 1014 2371 1 chr5D.!!$R1 1357
10 TraesCS7B01G044600 chr5A 491374989 491375655 666 True 412.000000 412 78.457000 1014 1681 1 chr5A.!!$R1 667
11 TraesCS7B01G044600 chrUn 342457276 342457809 533 True 401.000000 401 80.443000 1582 2118 1 chrUn.!!$R1 536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
328 329 0.035176 GGAGCCAGAGATCTCCATGC 59.965 60.0 19.3 17.83 46.24 4.06 F
740 741 0.039764 TCTCAGTCTCACCCACCGAT 59.960 55.0 0.0 0.00 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1818 4697 0.613777 GGAGAGGGTTCCACGTCAAT 59.386 55.0 0.00 0.0 37.2 2.57 R
2575 5501 0.527565 GGCTGGCACGTGATTCAAAT 59.472 50.0 22.23 0.0 0.0 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.538189 CAACGTATTTTGCCCTGAAAATTT 57.462 33.333 0.00 0.00 36.94 1.82
24 25 7.644986 CAACGTATTTTGCCCTGAAAATTTA 57.355 32.000 0.00 0.00 36.94 1.40
25 26 7.506474 CAACGTATTTTGCCCTGAAAATTTAC 58.494 34.615 0.00 0.00 36.94 2.01
26 27 6.750148 ACGTATTTTGCCCTGAAAATTTACA 58.250 32.000 0.00 0.00 36.94 2.41
27 28 6.643360 ACGTATTTTGCCCTGAAAATTTACAC 59.357 34.615 0.00 0.00 36.94 2.90
28 29 6.183359 CGTATTTTGCCCTGAAAATTTACACG 60.183 38.462 0.00 0.00 36.94 4.49
29 30 2.715737 TGCCCTGAAAATTTACACGC 57.284 45.000 0.00 0.00 0.00 5.34
30 31 2.235016 TGCCCTGAAAATTTACACGCT 58.765 42.857 0.00 0.00 0.00 5.07
31 32 2.625790 TGCCCTGAAAATTTACACGCTT 59.374 40.909 0.00 0.00 0.00 4.68
32 33 2.986479 GCCCTGAAAATTTACACGCTTG 59.014 45.455 0.00 0.00 0.00 4.01
33 34 3.552068 GCCCTGAAAATTTACACGCTTGT 60.552 43.478 0.05 0.05 40.02 3.16
45 46 3.592381 CACGCTTGTGTATTATGCCTC 57.408 47.619 0.00 0.00 38.84 4.70
46 47 2.287915 CACGCTTGTGTATTATGCCTCC 59.712 50.000 0.00 0.00 38.84 4.30
47 48 2.093181 ACGCTTGTGTATTATGCCTCCA 60.093 45.455 0.00 0.00 0.00 3.86
48 49 3.141398 CGCTTGTGTATTATGCCTCCAT 58.859 45.455 0.00 0.00 35.44 3.41
49 50 3.058708 CGCTTGTGTATTATGCCTCCATG 60.059 47.826 0.00 0.00 32.85 3.66
50 51 3.885297 GCTTGTGTATTATGCCTCCATGT 59.115 43.478 0.00 0.00 32.85 3.21
51 52 5.063204 GCTTGTGTATTATGCCTCCATGTA 58.937 41.667 0.00 0.00 32.85 2.29
52 53 5.707298 GCTTGTGTATTATGCCTCCATGTAT 59.293 40.000 0.00 0.00 32.85 2.29
53 54 6.878923 GCTTGTGTATTATGCCTCCATGTATA 59.121 38.462 0.00 0.00 32.85 1.47
54 55 7.554118 GCTTGTGTATTATGCCTCCATGTATAT 59.446 37.037 0.00 0.00 32.85 0.86
55 56 9.102757 CTTGTGTATTATGCCTCCATGTATATC 57.897 37.037 0.00 0.00 32.85 1.63
56 57 8.379428 TGTGTATTATGCCTCCATGTATATCT 57.621 34.615 0.00 0.00 32.85 1.98
57 58 8.260114 TGTGTATTATGCCTCCATGTATATCTG 58.740 37.037 0.00 0.00 32.85 2.90
58 59 8.260818 GTGTATTATGCCTCCATGTATATCTGT 58.739 37.037 0.00 0.00 32.85 3.41
59 60 9.487442 TGTATTATGCCTCCATGTATATCTGTA 57.513 33.333 0.00 0.00 32.85 2.74
64 65 8.798859 ATGCCTCCATGTATATCTGTATTTTC 57.201 34.615 0.00 0.00 0.00 2.29
65 66 7.977818 TGCCTCCATGTATATCTGTATTTTCT 58.022 34.615 0.00 0.00 0.00 2.52
66 67 8.439971 TGCCTCCATGTATATCTGTATTTTCTT 58.560 33.333 0.00 0.00 0.00 2.52
67 68 9.289782 GCCTCCATGTATATCTGTATTTTCTTT 57.710 33.333 0.00 0.00 0.00 2.52
126 127 9.840427 TCGATGAATTTTGAATTTTTCTAGACC 57.160 29.630 0.00 0.00 0.00 3.85
127 128 8.788813 CGATGAATTTTGAATTTTTCTAGACCG 58.211 33.333 0.00 0.00 0.00 4.79
128 129 9.840427 GATGAATTTTGAATTTTTCTAGACCGA 57.160 29.630 0.00 0.00 0.00 4.69
129 130 9.846248 ATGAATTTTGAATTTTTCTAGACCGAG 57.154 29.630 0.00 0.00 0.00 4.63
130 131 9.062524 TGAATTTTGAATTTTTCTAGACCGAGA 57.937 29.630 0.00 0.00 0.00 4.04
133 134 7.611213 TTTGAATTTTTCTAGACCGAGATCC 57.389 36.000 0.00 0.00 0.00 3.36
134 135 5.671493 TGAATTTTTCTAGACCGAGATCCC 58.329 41.667 0.00 0.00 0.00 3.85
135 136 5.425539 TGAATTTTTCTAGACCGAGATCCCT 59.574 40.000 0.00 0.00 0.00 4.20
136 137 4.737855 TTTTTCTAGACCGAGATCCCTG 57.262 45.455 0.00 0.00 0.00 4.45
137 138 2.366640 TTCTAGACCGAGATCCCTGG 57.633 55.000 0.00 0.00 0.00 4.45
138 139 1.519498 TCTAGACCGAGATCCCTGGA 58.481 55.000 0.00 0.00 0.00 3.86
139 140 1.422024 TCTAGACCGAGATCCCTGGAG 59.578 57.143 0.00 0.00 0.00 3.86
140 141 0.178987 TAGACCGAGATCCCTGGAGC 60.179 60.000 0.00 0.00 0.00 4.70
141 142 1.456705 GACCGAGATCCCTGGAGCT 60.457 63.158 3.09 3.09 44.17 4.09
144 145 3.453988 GAGATCCCTGGAGCTCGG 58.546 66.667 15.06 3.98 45.66 4.63
145 146 2.841988 AGATCCCTGGAGCTCGGC 60.842 66.667 7.83 0.00 35.87 5.54
146 147 3.934962 GATCCCTGGAGCTCGGCC 61.935 72.222 7.83 0.00 0.00 6.13
147 148 4.488911 ATCCCTGGAGCTCGGCCT 62.489 66.667 7.83 0.00 0.00 5.19
154 155 2.124942 GAGCTCGGCCTCCAAAGG 60.125 66.667 0.00 0.00 46.44 3.11
165 166 3.485463 CCTCCAAAGGCAATATACGGA 57.515 47.619 0.00 0.00 35.37 4.69
166 167 3.139077 CCTCCAAAGGCAATATACGGAC 58.861 50.000 0.00 0.00 35.37 4.79
167 168 3.433031 CCTCCAAAGGCAATATACGGACA 60.433 47.826 0.00 0.00 35.37 4.02
168 169 4.196193 CTCCAAAGGCAATATACGGACAA 58.804 43.478 0.00 0.00 0.00 3.18
169 170 4.590918 TCCAAAGGCAATATACGGACAAA 58.409 39.130 0.00 0.00 0.00 2.83
170 171 5.197451 TCCAAAGGCAATATACGGACAAAT 58.803 37.500 0.00 0.00 0.00 2.32
171 172 5.654650 TCCAAAGGCAATATACGGACAAATT 59.345 36.000 0.00 0.00 0.00 1.82
172 173 5.977129 CCAAAGGCAATATACGGACAAATTC 59.023 40.000 0.00 0.00 0.00 2.17
173 174 6.405286 CCAAAGGCAATATACGGACAAATTCA 60.405 38.462 0.00 0.00 0.00 2.57
174 175 6.959639 AAGGCAATATACGGACAAATTCAT 57.040 33.333 0.00 0.00 0.00 2.57
175 176 6.560253 AGGCAATATACGGACAAATTCATC 57.440 37.500 0.00 0.00 0.00 2.92
176 177 6.061441 AGGCAATATACGGACAAATTCATCA 58.939 36.000 0.00 0.00 0.00 3.07
177 178 6.716628 AGGCAATATACGGACAAATTCATCAT 59.283 34.615 0.00 0.00 0.00 2.45
178 179 7.882791 AGGCAATATACGGACAAATTCATCATA 59.117 33.333 0.00 0.00 0.00 2.15
179 180 8.511321 GGCAATATACGGACAAATTCATCATAA 58.489 33.333 0.00 0.00 0.00 1.90
183 184 5.095691 ACGGACAAATTCATCATAATCGC 57.904 39.130 0.00 0.00 0.00 4.58
184 185 4.816385 ACGGACAAATTCATCATAATCGCT 59.184 37.500 0.00 0.00 0.00 4.93
185 186 5.296780 ACGGACAAATTCATCATAATCGCTT 59.703 36.000 0.00 0.00 0.00 4.68
186 187 5.848036 CGGACAAATTCATCATAATCGCTTC 59.152 40.000 0.00 0.00 0.00 3.86
187 188 5.848036 GGACAAATTCATCATAATCGCTTCG 59.152 40.000 0.00 0.00 0.00 3.79
188 189 5.751680 ACAAATTCATCATAATCGCTTCGG 58.248 37.500 0.00 0.00 0.00 4.30
189 190 5.296780 ACAAATTCATCATAATCGCTTCGGT 59.703 36.000 0.00 0.00 0.00 4.69
190 191 5.597813 AATTCATCATAATCGCTTCGGTC 57.402 39.130 0.00 0.00 0.00 4.79
191 192 4.322080 TTCATCATAATCGCTTCGGTCT 57.678 40.909 0.00 0.00 0.00 3.85
192 193 3.642705 TCATCATAATCGCTTCGGTCTG 58.357 45.455 0.00 0.00 0.00 3.51
193 194 1.852942 TCATAATCGCTTCGGTCTGC 58.147 50.000 0.00 0.00 0.00 4.26
194 195 1.136110 TCATAATCGCTTCGGTCTGCA 59.864 47.619 0.00 0.00 0.00 4.41
195 196 2.138320 CATAATCGCTTCGGTCTGCAT 58.862 47.619 0.00 0.00 0.00 3.96
196 197 1.570813 TAATCGCTTCGGTCTGCATG 58.429 50.000 0.00 0.00 0.00 4.06
197 198 1.091771 AATCGCTTCGGTCTGCATGG 61.092 55.000 0.00 0.00 0.00 3.66
198 199 3.869272 CGCTTCGGTCTGCATGGC 61.869 66.667 0.00 0.00 0.00 4.40
199 200 2.437359 GCTTCGGTCTGCATGGCT 60.437 61.111 0.00 0.00 0.00 4.75
200 201 2.758089 GCTTCGGTCTGCATGGCTG 61.758 63.158 0.00 0.00 0.00 4.85
201 202 2.046023 TTCGGTCTGCATGGCTGG 60.046 61.111 0.00 0.00 0.00 4.85
202 203 2.526450 CTTCGGTCTGCATGGCTGGA 62.526 60.000 0.00 0.00 0.00 3.86
203 204 1.913951 TTCGGTCTGCATGGCTGGAT 61.914 55.000 0.00 0.00 0.00 3.41
204 205 1.048160 TCGGTCTGCATGGCTGGATA 61.048 55.000 0.00 0.00 0.00 2.59
205 206 0.602106 CGGTCTGCATGGCTGGATAG 60.602 60.000 0.00 0.00 0.00 2.08
206 207 0.471617 GGTCTGCATGGCTGGATAGT 59.528 55.000 0.00 0.00 0.00 2.12
207 208 1.694150 GGTCTGCATGGCTGGATAGTA 59.306 52.381 0.00 0.00 0.00 1.82
208 209 2.304180 GGTCTGCATGGCTGGATAGTAT 59.696 50.000 0.00 0.00 0.00 2.12
209 210 3.515502 GGTCTGCATGGCTGGATAGTATA 59.484 47.826 0.00 0.00 0.00 1.47
210 211 4.163078 GGTCTGCATGGCTGGATAGTATAT 59.837 45.833 0.00 0.00 0.00 0.86
211 212 5.363868 GGTCTGCATGGCTGGATAGTATATA 59.636 44.000 0.00 0.00 0.00 0.86
212 213 6.127054 GGTCTGCATGGCTGGATAGTATATAA 60.127 42.308 0.00 0.00 0.00 0.98
213 214 7.419518 GGTCTGCATGGCTGGATAGTATATAAT 60.420 40.741 0.00 0.00 0.00 1.28
214 215 7.989741 GTCTGCATGGCTGGATAGTATATAATT 59.010 37.037 0.00 0.00 0.00 1.40
215 216 8.551440 TCTGCATGGCTGGATAGTATATAATTT 58.449 33.333 0.00 0.00 0.00 1.82
216 217 9.182214 CTGCATGGCTGGATAGTATATAATTTT 57.818 33.333 0.00 0.00 0.00 1.82
217 218 8.959548 TGCATGGCTGGATAGTATATAATTTTG 58.040 33.333 0.00 0.00 0.00 2.44
218 219 8.960591 GCATGGCTGGATAGTATATAATTTTGT 58.039 33.333 0.00 0.00 0.00 2.83
275 276 3.120041 GTTGGAAACCGAACAATTGTGG 58.880 45.455 12.82 12.50 42.21 4.17
276 277 2.656002 TGGAAACCGAACAATTGTGGA 58.344 42.857 19.06 0.00 0.00 4.02
277 278 2.359531 TGGAAACCGAACAATTGTGGAC 59.640 45.455 19.06 10.28 0.00 4.02
278 279 2.359531 GGAAACCGAACAATTGTGGACA 59.640 45.455 19.06 0.00 0.00 4.02
279 280 3.181485 GGAAACCGAACAATTGTGGACAA 60.181 43.478 19.06 0.00 40.51 3.18
280 281 4.425520 GAAACCGAACAATTGTGGACAAA 58.574 39.130 19.06 0.00 39.55 2.83
281 282 3.430333 ACCGAACAATTGTGGACAAAC 57.570 42.857 19.06 3.17 39.55 2.93
282 283 3.020984 ACCGAACAATTGTGGACAAACT 58.979 40.909 19.06 0.00 39.55 2.66
283 284 3.066203 ACCGAACAATTGTGGACAAACTC 59.934 43.478 19.06 7.16 39.55 3.01
284 285 3.066064 CCGAACAATTGTGGACAAACTCA 59.934 43.478 12.82 0.00 39.55 3.41
285 286 4.439426 CCGAACAATTGTGGACAAACTCAA 60.439 41.667 12.82 0.00 39.55 3.02
286 287 5.098893 CGAACAATTGTGGACAAACTCAAA 58.901 37.500 12.82 0.00 39.55 2.69
287 288 5.748152 CGAACAATTGTGGACAAACTCAAAT 59.252 36.000 12.82 0.00 39.55 2.32
288 289 6.291743 CGAACAATTGTGGACAAACTCAAATG 60.292 38.462 12.82 0.00 39.55 2.32
289 290 6.219417 ACAATTGTGGACAAACTCAAATGA 57.781 33.333 11.07 0.00 39.55 2.57
290 291 6.042143 ACAATTGTGGACAAACTCAAATGAC 58.958 36.000 11.07 0.00 39.55 3.06
291 292 5.850557 ATTGTGGACAAACTCAAATGACA 57.149 34.783 0.00 0.00 39.55 3.58
292 293 5.850557 TTGTGGACAAACTCAAATGACAT 57.149 34.783 0.00 0.00 32.11 3.06
293 294 5.850557 TGTGGACAAACTCAAATGACATT 57.149 34.783 0.00 0.00 0.00 2.71
294 295 6.219417 TGTGGACAAACTCAAATGACATTT 57.781 33.333 7.62 7.62 0.00 2.32
295 296 7.340122 TGTGGACAAACTCAAATGACATTTA 57.660 32.000 12.98 2.34 0.00 1.40
296 297 7.776107 TGTGGACAAACTCAAATGACATTTAA 58.224 30.769 12.98 0.00 0.00 1.52
297 298 8.420222 TGTGGACAAACTCAAATGACATTTAAT 58.580 29.630 12.98 0.00 0.00 1.40
298 299 8.702438 GTGGACAAACTCAAATGACATTTAATG 58.298 33.333 12.98 3.07 0.00 1.90
300 301 9.260002 GGACAAACTCAAATGACATTTAATGTT 57.740 29.630 12.13 13.82 45.03 2.71
302 303 9.260002 ACAAACTCAAATGACATTTAATGTTCC 57.740 29.630 12.13 1.16 45.03 3.62
303 304 8.711457 CAAACTCAAATGACATTTAATGTTCCC 58.289 33.333 12.13 0.45 45.03 3.97
304 305 7.537596 ACTCAAATGACATTTAATGTTCCCA 57.462 32.000 12.13 6.26 45.03 4.37
305 306 7.961351 ACTCAAATGACATTTAATGTTCCCAA 58.039 30.769 12.13 0.00 45.03 4.12
306 307 8.428063 ACTCAAATGACATTTAATGTTCCCAAA 58.572 29.630 12.13 0.00 45.03 3.28
307 308 9.270640 CTCAAATGACATTTAATGTTCCCAAAA 57.729 29.630 12.13 0.00 45.03 2.44
308 309 9.618890 TCAAATGACATTTAATGTTCCCAAAAA 57.381 25.926 12.13 0.00 45.03 1.94
309 310 9.881529 CAAATGACATTTAATGTTCCCAAAAAG 57.118 29.630 12.13 0.00 45.03 2.27
310 311 8.620116 AATGACATTTAATGTTCCCAAAAAGG 57.380 30.769 12.13 0.00 45.03 3.11
311 312 7.366847 TGACATTTAATGTTCCCAAAAAGGA 57.633 32.000 12.13 0.00 45.03 3.36
312 313 7.441017 TGACATTTAATGTTCCCAAAAAGGAG 58.559 34.615 12.13 0.00 45.03 3.69
313 314 6.230472 ACATTTAATGTTCCCAAAAAGGAGC 58.770 36.000 4.56 0.00 41.63 4.70
314 315 4.882842 TTAATGTTCCCAAAAAGGAGCC 57.117 40.909 0.00 0.00 41.22 4.70
315 316 2.397044 ATGTTCCCAAAAAGGAGCCA 57.603 45.000 0.00 0.00 41.22 4.75
316 317 1.703411 TGTTCCCAAAAAGGAGCCAG 58.297 50.000 0.00 0.00 41.22 4.85
317 318 1.216678 TGTTCCCAAAAAGGAGCCAGA 59.783 47.619 0.00 0.00 41.22 3.86
318 319 1.889170 GTTCCCAAAAAGGAGCCAGAG 59.111 52.381 0.00 0.00 41.22 3.35
319 320 1.444933 TCCCAAAAAGGAGCCAGAGA 58.555 50.000 0.00 0.00 41.22 3.10
320 321 1.995542 TCCCAAAAAGGAGCCAGAGAT 59.004 47.619 0.00 0.00 41.22 2.75
321 322 2.025887 TCCCAAAAAGGAGCCAGAGATC 60.026 50.000 0.00 0.00 41.22 2.75
322 323 2.025510 CCCAAAAAGGAGCCAGAGATCT 60.026 50.000 0.00 0.00 41.22 2.75
323 324 3.277715 CCAAAAAGGAGCCAGAGATCTC 58.722 50.000 15.29 15.29 41.22 2.75
328 329 0.035176 GGAGCCAGAGATCTCCATGC 59.965 60.000 19.30 17.83 46.24 4.06
329 330 0.757512 GAGCCAGAGATCTCCATGCA 59.242 55.000 19.30 0.00 0.00 3.96
330 331 1.140452 GAGCCAGAGATCTCCATGCAA 59.860 52.381 19.30 0.00 0.00 4.08
331 332 1.141254 AGCCAGAGATCTCCATGCAAG 59.859 52.381 19.30 1.39 0.00 4.01
332 333 1.595466 CCAGAGATCTCCATGCAAGC 58.405 55.000 19.30 0.00 0.00 4.01
333 334 1.134189 CCAGAGATCTCCATGCAAGCA 60.134 52.381 19.30 0.00 0.00 3.91
334 335 2.640184 CAGAGATCTCCATGCAAGCAA 58.360 47.619 19.30 0.00 0.00 3.91
335 336 2.355132 CAGAGATCTCCATGCAAGCAAC 59.645 50.000 19.30 0.00 0.00 4.17
336 337 1.674962 GAGATCTCCATGCAAGCAACC 59.325 52.381 12.00 0.00 0.00 3.77
337 338 1.005097 AGATCTCCATGCAAGCAACCA 59.995 47.619 0.00 0.00 0.00 3.67
338 339 1.820519 GATCTCCATGCAAGCAACCAA 59.179 47.619 0.00 0.00 0.00 3.67
339 340 1.250328 TCTCCATGCAAGCAACCAAG 58.750 50.000 0.00 0.00 0.00 3.61
340 341 0.245539 CTCCATGCAAGCAACCAAGG 59.754 55.000 0.00 0.00 0.00 3.61
341 342 0.178967 TCCATGCAAGCAACCAAGGA 60.179 50.000 0.00 0.00 0.00 3.36
342 343 0.245539 CCATGCAAGCAACCAAGGAG 59.754 55.000 0.00 0.00 0.00 3.69
343 344 1.250328 CATGCAAGCAACCAAGGAGA 58.750 50.000 0.00 0.00 0.00 3.71
344 345 1.822990 CATGCAAGCAACCAAGGAGAT 59.177 47.619 0.00 0.00 0.00 2.75
345 346 1.250328 TGCAAGCAACCAAGGAGATG 58.750 50.000 0.00 0.00 0.00 2.90
346 347 1.251251 GCAAGCAACCAAGGAGATGT 58.749 50.000 0.00 0.00 0.00 3.06
347 348 2.224744 TGCAAGCAACCAAGGAGATGTA 60.225 45.455 0.00 0.00 0.00 2.29
348 349 3.019564 GCAAGCAACCAAGGAGATGTAT 58.980 45.455 0.00 0.00 0.00 2.29
349 350 3.445096 GCAAGCAACCAAGGAGATGTATT 59.555 43.478 0.00 0.00 0.00 1.89
350 351 4.640201 GCAAGCAACCAAGGAGATGTATTA 59.360 41.667 0.00 0.00 0.00 0.98
351 352 5.125417 GCAAGCAACCAAGGAGATGTATTAA 59.875 40.000 0.00 0.00 0.00 1.40
352 353 6.678900 GCAAGCAACCAAGGAGATGTATTAAG 60.679 42.308 0.00 0.00 0.00 1.85
353 354 6.313519 AGCAACCAAGGAGATGTATTAAGA 57.686 37.500 0.00 0.00 0.00 2.10
354 355 6.904626 AGCAACCAAGGAGATGTATTAAGAT 58.095 36.000 0.00 0.00 0.00 2.40
355 356 6.995091 AGCAACCAAGGAGATGTATTAAGATC 59.005 38.462 0.00 0.00 0.00 2.75
356 357 6.073548 GCAACCAAGGAGATGTATTAAGATCG 60.074 42.308 0.00 0.00 30.76 3.69
357 358 6.978674 ACCAAGGAGATGTATTAAGATCGA 57.021 37.500 0.00 0.00 30.76 3.59
358 359 7.361457 ACCAAGGAGATGTATTAAGATCGAA 57.639 36.000 0.00 0.00 30.76 3.71
359 360 7.792032 ACCAAGGAGATGTATTAAGATCGAAA 58.208 34.615 0.00 0.00 30.76 3.46
360 361 8.265055 ACCAAGGAGATGTATTAAGATCGAAAA 58.735 33.333 0.00 0.00 30.76 2.29
361 362 9.109393 CCAAGGAGATGTATTAAGATCGAAAAA 57.891 33.333 0.00 0.00 30.76 1.94
394 395 7.569639 GTGATACCACTCTCTAGACAATACA 57.430 40.000 0.00 0.00 40.10 2.29
395 396 7.997482 GTGATACCACTCTCTAGACAATACAA 58.003 38.462 0.00 0.00 40.10 2.41
396 397 8.467598 GTGATACCACTCTCTAGACAATACAAA 58.532 37.037 0.00 0.00 40.10 2.83
397 398 9.201989 TGATACCACTCTCTAGACAATACAAAT 57.798 33.333 0.00 0.00 0.00 2.32
398 399 9.469807 GATACCACTCTCTAGACAATACAAATG 57.530 37.037 0.00 0.00 0.00 2.32
399 400 7.246171 ACCACTCTCTAGACAATACAAATGT 57.754 36.000 0.00 0.00 0.00 2.71
400 401 7.324178 ACCACTCTCTAGACAATACAAATGTC 58.676 38.462 0.00 0.00 45.94 3.06
409 410 6.853279 GACAATACAAATGTCGAAATGTGG 57.147 37.500 10.59 0.00 37.98 4.17
410 411 6.325919 ACAATACAAATGTCGAAATGTGGT 57.674 33.333 10.59 2.00 0.00 4.16
411 412 6.148948 ACAATACAAATGTCGAAATGTGGTG 58.851 36.000 10.59 7.56 0.00 4.17
412 413 3.011949 ACAAATGTCGAAATGTGGTGC 57.988 42.857 10.59 0.00 0.00 5.01
413 414 2.360483 ACAAATGTCGAAATGTGGTGCA 59.640 40.909 10.59 0.00 0.00 4.57
414 415 3.181482 ACAAATGTCGAAATGTGGTGCAA 60.181 39.130 10.59 0.00 0.00 4.08
415 416 3.724508 AATGTCGAAATGTGGTGCAAA 57.275 38.095 0.00 0.00 0.00 3.68
416 417 3.940209 ATGTCGAAATGTGGTGCAAAT 57.060 38.095 0.00 0.00 0.00 2.32
417 418 5.384063 AATGTCGAAATGTGGTGCAAATA 57.616 34.783 0.00 0.00 0.00 1.40
418 419 4.418013 TGTCGAAATGTGGTGCAAATAG 57.582 40.909 0.00 0.00 0.00 1.73
419 420 3.818210 TGTCGAAATGTGGTGCAAATAGT 59.182 39.130 0.00 0.00 0.00 2.12
420 421 4.083537 TGTCGAAATGTGGTGCAAATAGTC 60.084 41.667 0.00 0.00 0.00 2.59
421 422 4.068599 TCGAAATGTGGTGCAAATAGTCA 58.931 39.130 0.00 0.00 0.00 3.41
422 423 4.699735 TCGAAATGTGGTGCAAATAGTCAT 59.300 37.500 0.00 0.00 0.00 3.06
423 424 4.794762 CGAAATGTGGTGCAAATAGTCATG 59.205 41.667 0.00 0.00 0.00 3.07
424 425 5.391843 CGAAATGTGGTGCAAATAGTCATGA 60.392 40.000 0.00 0.00 0.00 3.07
425 426 5.981088 AATGTGGTGCAAATAGTCATGAA 57.019 34.783 0.00 0.00 0.00 2.57
426 427 4.764679 TGTGGTGCAAATAGTCATGAAC 57.235 40.909 0.00 0.00 0.00 3.18
427 428 3.505680 TGTGGTGCAAATAGTCATGAACC 59.494 43.478 0.00 0.00 44.37 3.62
429 430 4.989279 GGTGCAAATAGTCATGAACCAT 57.011 40.909 0.00 0.00 43.68 3.55
430 431 5.329035 GGTGCAAATAGTCATGAACCATT 57.671 39.130 0.00 0.00 43.68 3.16
431 432 5.723295 GGTGCAAATAGTCATGAACCATTT 58.277 37.500 0.00 0.83 43.68 2.32
432 433 5.807011 GGTGCAAATAGTCATGAACCATTTC 59.193 40.000 0.00 0.26 43.68 2.17
433 434 6.389091 GTGCAAATAGTCATGAACCATTTCA 58.611 36.000 0.00 2.52 45.93 2.69
434 435 6.529125 GTGCAAATAGTCATGAACCATTTCAG 59.471 38.462 0.00 0.00 45.07 3.02
435 436 6.433716 TGCAAATAGTCATGAACCATTTCAGA 59.566 34.615 0.00 0.00 45.07 3.27
436 437 7.039853 TGCAAATAGTCATGAACCATTTCAGAA 60.040 33.333 0.00 0.00 45.07 3.02
437 438 7.487189 GCAAATAGTCATGAACCATTTCAGAAG 59.513 37.037 0.00 0.00 45.07 2.85
438 439 8.733458 CAAATAGTCATGAACCATTTCAGAAGA 58.267 33.333 0.00 0.00 45.07 2.87
439 440 8.868522 AATAGTCATGAACCATTTCAGAAGAA 57.131 30.769 0.00 0.00 45.07 2.52
440 441 8.868522 ATAGTCATGAACCATTTCAGAAGAAA 57.131 30.769 0.00 0.00 45.07 2.52
486 487 9.672086 TTCGAATCAAAATTTACTTTACACCTG 57.328 29.630 0.00 0.00 0.00 4.00
487 488 9.058174 TCGAATCAAAATTTACTTTACACCTGA 57.942 29.630 0.00 0.00 0.00 3.86
488 489 9.329913 CGAATCAAAATTTACTTTACACCTGAG 57.670 33.333 0.00 0.00 0.00 3.35
493 494 9.796120 CAAAATTTACTTTACACCTGAGAAACA 57.204 29.630 0.00 0.00 0.00 2.83
495 496 9.965824 AAATTTACTTTACACCTGAGAAACATG 57.034 29.630 0.00 0.00 0.00 3.21
496 497 7.504924 TTTACTTTACACCTGAGAAACATGG 57.495 36.000 0.00 0.00 0.00 3.66
497 498 5.304686 ACTTTACACCTGAGAAACATGGA 57.695 39.130 0.00 0.00 0.00 3.41
498 499 5.690865 ACTTTACACCTGAGAAACATGGAA 58.309 37.500 0.00 0.00 0.00 3.53
499 500 5.765182 ACTTTACACCTGAGAAACATGGAAG 59.235 40.000 0.00 0.00 0.00 3.46
500 501 5.560722 TTACACCTGAGAAACATGGAAGA 57.439 39.130 0.00 0.00 0.00 2.87
501 502 3.744660 ACACCTGAGAAACATGGAAGAC 58.255 45.455 0.00 0.00 0.00 3.01
502 503 3.136443 ACACCTGAGAAACATGGAAGACA 59.864 43.478 0.00 0.00 0.00 3.41
503 504 4.136796 CACCTGAGAAACATGGAAGACAA 58.863 43.478 0.00 0.00 0.00 3.18
504 505 4.580167 CACCTGAGAAACATGGAAGACAAA 59.420 41.667 0.00 0.00 0.00 2.83
505 506 5.067674 CACCTGAGAAACATGGAAGACAAAA 59.932 40.000 0.00 0.00 0.00 2.44
506 507 5.835280 ACCTGAGAAACATGGAAGACAAAAT 59.165 36.000 0.00 0.00 0.00 1.82
507 508 6.015940 ACCTGAGAAACATGGAAGACAAAATC 60.016 38.462 0.00 0.00 0.00 2.17
508 509 6.331369 TGAGAAACATGGAAGACAAAATCC 57.669 37.500 0.00 0.00 36.21 3.01
509 510 6.070656 TGAGAAACATGGAAGACAAAATCCT 58.929 36.000 0.00 0.00 36.64 3.24
510 511 6.207417 TGAGAAACATGGAAGACAAAATCCTC 59.793 38.462 0.00 0.00 36.64 3.71
511 512 6.310149 AGAAACATGGAAGACAAAATCCTCT 58.690 36.000 0.00 0.00 36.64 3.69
512 513 5.972107 AACATGGAAGACAAAATCCTCTG 57.028 39.130 0.00 0.00 36.64 3.35
513 514 5.246981 ACATGGAAGACAAAATCCTCTGA 57.753 39.130 0.00 0.00 36.64 3.27
514 515 5.634118 ACATGGAAGACAAAATCCTCTGAA 58.366 37.500 0.00 0.00 36.64 3.02
515 516 6.070656 ACATGGAAGACAAAATCCTCTGAAA 58.929 36.000 0.00 0.00 36.64 2.69
516 517 6.550854 ACATGGAAGACAAAATCCTCTGAAAA 59.449 34.615 0.00 0.00 36.64 2.29
517 518 7.069826 ACATGGAAGACAAAATCCTCTGAAAAA 59.930 33.333 0.00 0.00 36.64 1.94
518 519 6.805713 TGGAAGACAAAATCCTCTGAAAAAC 58.194 36.000 0.00 0.00 36.64 2.43
519 520 6.379703 TGGAAGACAAAATCCTCTGAAAAACA 59.620 34.615 0.00 0.00 36.64 2.83
520 521 7.069826 TGGAAGACAAAATCCTCTGAAAAACAT 59.930 33.333 0.00 0.00 36.64 2.71
521 522 7.596621 GGAAGACAAAATCCTCTGAAAAACATC 59.403 37.037 0.00 0.00 32.75 3.06
522 523 7.830099 AGACAAAATCCTCTGAAAAACATCT 57.170 32.000 0.00 0.00 0.00 2.90
523 524 7.655490 AGACAAAATCCTCTGAAAAACATCTG 58.345 34.615 0.00 0.00 0.00 2.90
524 525 7.503566 AGACAAAATCCTCTGAAAAACATCTGA 59.496 33.333 0.00 0.00 0.00 3.27
525 526 8.010733 ACAAAATCCTCTGAAAAACATCTGAA 57.989 30.769 0.00 0.00 0.00 3.02
526 527 8.477256 ACAAAATCCTCTGAAAAACATCTGAAA 58.523 29.630 0.00 0.00 0.00 2.69
527 528 9.485206 CAAAATCCTCTGAAAAACATCTGAAAT 57.515 29.630 0.00 0.00 0.00 2.17
532 533 8.299570 TCCTCTGAAAAACATCTGAAATAAAGC 58.700 33.333 0.00 0.00 0.00 3.51
533 534 7.272084 CCTCTGAAAAACATCTGAAATAAAGCG 59.728 37.037 0.00 0.00 0.00 4.68
534 535 7.083858 TCTGAAAAACATCTGAAATAAAGCGG 58.916 34.615 0.00 0.00 0.00 5.52
535 536 6.976088 TGAAAAACATCTGAAATAAAGCGGA 58.024 32.000 0.00 0.00 0.00 5.54
536 537 7.429633 TGAAAAACATCTGAAATAAAGCGGAA 58.570 30.769 0.00 0.00 0.00 4.30
537 538 7.923344 TGAAAAACATCTGAAATAAAGCGGAAA 59.077 29.630 0.00 0.00 0.00 3.13
538 539 7.873739 AAAACATCTGAAATAAAGCGGAAAG 57.126 32.000 0.00 0.00 0.00 2.62
539 540 5.567138 ACATCTGAAATAAAGCGGAAAGG 57.433 39.130 0.00 0.00 0.00 3.11
540 541 5.253330 ACATCTGAAATAAAGCGGAAAGGA 58.747 37.500 0.00 0.00 0.00 3.36
541 542 5.355350 ACATCTGAAATAAAGCGGAAAGGAG 59.645 40.000 0.00 0.00 0.00 3.69
542 543 5.160607 TCTGAAATAAAGCGGAAAGGAGA 57.839 39.130 0.00 0.00 0.00 3.71
543 544 5.178797 TCTGAAATAAAGCGGAAAGGAGAG 58.821 41.667 0.00 0.00 0.00 3.20
544 545 4.261801 TGAAATAAAGCGGAAAGGAGAGG 58.738 43.478 0.00 0.00 0.00 3.69
545 546 4.019681 TGAAATAAAGCGGAAAGGAGAGGA 60.020 41.667 0.00 0.00 0.00 3.71
546 547 3.545366 ATAAAGCGGAAAGGAGAGGAC 57.455 47.619 0.00 0.00 0.00 3.85
547 548 1.056660 AAAGCGGAAAGGAGAGGACA 58.943 50.000 0.00 0.00 0.00 4.02
548 549 1.280457 AAGCGGAAAGGAGAGGACAT 58.720 50.000 0.00 0.00 0.00 3.06
549 550 1.280457 AGCGGAAAGGAGAGGACATT 58.720 50.000 0.00 0.00 0.00 2.71
550 551 1.630878 AGCGGAAAGGAGAGGACATTT 59.369 47.619 0.00 0.00 0.00 2.32
551 552 2.040412 AGCGGAAAGGAGAGGACATTTT 59.960 45.455 0.00 0.00 0.00 1.82
552 553 2.820197 GCGGAAAGGAGAGGACATTTTT 59.180 45.455 0.00 0.00 0.00 1.94
577 578 8.786826 TTTTTCATGTAGTCACTAACCTATGG 57.213 34.615 0.00 0.00 0.00 2.74
578 579 5.531122 TCATGTAGTCACTAACCTATGGC 57.469 43.478 0.00 0.00 0.00 4.40
579 580 4.344102 TCATGTAGTCACTAACCTATGGCC 59.656 45.833 0.00 0.00 0.00 5.36
580 581 3.990369 TGTAGTCACTAACCTATGGCCT 58.010 45.455 3.32 0.00 0.00 5.19
581 582 5.133383 TGTAGTCACTAACCTATGGCCTA 57.867 43.478 3.32 0.00 0.00 3.93
582 583 5.712752 TGTAGTCACTAACCTATGGCCTAT 58.287 41.667 3.32 0.00 0.00 2.57
583 584 5.538813 TGTAGTCACTAACCTATGGCCTATG 59.461 44.000 3.32 0.00 0.00 2.23
584 585 3.904339 AGTCACTAACCTATGGCCTATGG 59.096 47.826 3.32 5.56 0.00 2.74
585 586 3.646637 GTCACTAACCTATGGCCTATGGT 59.353 47.826 3.32 6.28 0.00 3.55
586 587 4.102681 GTCACTAACCTATGGCCTATGGTT 59.897 45.833 23.11 23.11 44.03 3.67
587 588 4.347000 TCACTAACCTATGGCCTATGGTTC 59.653 45.833 23.20 0.00 42.14 3.62
588 589 3.651423 ACTAACCTATGGCCTATGGTTCC 59.349 47.826 23.20 0.00 42.14 3.62
589 590 1.446016 ACCTATGGCCTATGGTTCCC 58.554 55.000 3.32 0.00 0.00 3.97
590 591 0.324943 CCTATGGCCTATGGTTCCCG 59.675 60.000 3.32 0.00 0.00 5.14
591 592 0.321653 CTATGGCCTATGGTTCCCGC 60.322 60.000 3.32 0.00 0.00 6.13
592 593 1.057275 TATGGCCTATGGTTCCCGCA 61.057 55.000 3.32 0.00 0.00 5.69
593 594 1.932156 ATGGCCTATGGTTCCCGCAA 61.932 55.000 3.32 0.00 0.00 4.85
594 595 1.379309 GGCCTATGGTTCCCGCAAA 60.379 57.895 0.00 0.00 0.00 3.68
595 596 0.968393 GGCCTATGGTTCCCGCAAAA 60.968 55.000 0.00 0.00 0.00 2.44
596 597 0.892063 GCCTATGGTTCCCGCAAAAA 59.108 50.000 0.00 0.00 0.00 1.94
635 636 5.857268 CCTATGGGCCTTAAAAATTGATGG 58.143 41.667 4.53 0.00 0.00 3.51
636 637 5.366477 CCTATGGGCCTTAAAAATTGATGGT 59.634 40.000 4.53 0.00 0.00 3.55
637 638 4.817318 TGGGCCTTAAAAATTGATGGTC 57.183 40.909 4.53 0.00 0.00 4.02
638 639 3.517500 TGGGCCTTAAAAATTGATGGTCC 59.482 43.478 4.53 0.00 39.59 4.46
639 640 3.517500 GGGCCTTAAAAATTGATGGTCCA 59.482 43.478 0.84 0.00 39.02 4.02
640 641 4.503910 GGCCTTAAAAATTGATGGTCCAC 58.496 43.478 0.00 0.00 0.00 4.02
641 642 4.222810 GGCCTTAAAAATTGATGGTCCACT 59.777 41.667 0.00 0.00 0.00 4.00
642 643 5.420739 GGCCTTAAAAATTGATGGTCCACTA 59.579 40.000 0.00 0.00 0.00 2.74
643 644 6.071051 GGCCTTAAAAATTGATGGTCCACTAA 60.071 38.462 0.00 0.00 0.00 2.24
644 645 6.811665 GCCTTAAAAATTGATGGTCCACTAAC 59.188 38.462 0.00 0.00 0.00 2.34
645 646 7.524698 GCCTTAAAAATTGATGGTCCACTAACA 60.525 37.037 0.00 0.00 0.00 2.41
646 647 7.812669 CCTTAAAAATTGATGGTCCACTAACAC 59.187 37.037 0.00 0.00 0.00 3.32
647 648 5.722021 AAAATTGATGGTCCACTAACACC 57.278 39.130 0.00 0.00 0.00 4.16
648 649 4.380843 AATTGATGGTCCACTAACACCA 57.619 40.909 0.00 0.00 46.84 4.17
649 650 3.417069 TTGATGGTCCACTAACACCAG 57.583 47.619 0.00 0.00 45.98 4.00
650 651 2.615391 TGATGGTCCACTAACACCAGA 58.385 47.619 0.00 0.00 45.98 3.86
651 652 3.181329 TGATGGTCCACTAACACCAGAT 58.819 45.455 0.00 0.00 45.98 2.90
652 653 3.587061 TGATGGTCCACTAACACCAGATT 59.413 43.478 0.00 0.00 45.98 2.40
653 654 3.417069 TGGTCCACTAACACCAGATTG 57.583 47.619 0.00 0.00 37.78 2.67
654 655 2.084546 GGTCCACTAACACCAGATTGC 58.915 52.381 0.00 0.00 32.33 3.56
655 656 2.290323 GGTCCACTAACACCAGATTGCT 60.290 50.000 0.00 0.00 32.33 3.91
656 657 3.412386 GTCCACTAACACCAGATTGCTT 58.588 45.455 0.00 0.00 0.00 3.91
657 658 3.821033 GTCCACTAACACCAGATTGCTTT 59.179 43.478 0.00 0.00 0.00 3.51
658 659 3.820467 TCCACTAACACCAGATTGCTTTG 59.180 43.478 0.00 0.00 0.00 2.77
659 660 3.820467 CCACTAACACCAGATTGCTTTGA 59.180 43.478 0.00 0.00 0.00 2.69
660 661 4.460382 CCACTAACACCAGATTGCTTTGAT 59.540 41.667 0.00 0.00 0.00 2.57
661 662 5.392380 CCACTAACACCAGATTGCTTTGATC 60.392 44.000 0.00 0.00 0.00 2.92
662 663 3.837213 AACACCAGATTGCTTTGATCG 57.163 42.857 0.00 0.00 0.00 3.69
663 664 2.086869 ACACCAGATTGCTTTGATCGG 58.913 47.619 0.00 0.00 0.00 4.18
664 665 1.402968 CACCAGATTGCTTTGATCGGG 59.597 52.381 2.42 2.42 42.37 5.14
665 666 1.004745 ACCAGATTGCTTTGATCGGGT 59.995 47.619 3.58 3.58 44.00 5.28
666 667 1.402968 CCAGATTGCTTTGATCGGGTG 59.597 52.381 0.00 0.00 35.13 4.61
667 668 1.098050 AGATTGCTTTGATCGGGTGC 58.902 50.000 0.00 0.00 0.00 5.01
668 669 0.248215 GATTGCTTTGATCGGGTGCG 60.248 55.000 0.00 0.00 0.00 5.34
669 670 0.960364 ATTGCTTTGATCGGGTGCGT 60.960 50.000 0.00 0.00 0.00 5.24
670 671 1.573829 TTGCTTTGATCGGGTGCGTC 61.574 55.000 0.00 0.00 0.00 5.19
671 672 1.741770 GCTTTGATCGGGTGCGTCT 60.742 57.895 0.00 0.00 0.00 4.18
672 673 1.298859 GCTTTGATCGGGTGCGTCTT 61.299 55.000 0.00 0.00 0.00 3.01
673 674 0.721718 CTTTGATCGGGTGCGTCTTC 59.278 55.000 0.00 0.00 0.00 2.87
674 675 0.672401 TTTGATCGGGTGCGTCTTCC 60.672 55.000 0.00 0.00 0.00 3.46
675 676 2.202892 GATCGGGTGCGTCTTCCC 60.203 66.667 0.00 0.00 40.26 3.97
676 677 3.735037 GATCGGGTGCGTCTTCCCC 62.735 68.421 0.00 0.00 40.54 4.81
678 679 4.452733 CGGGTGCGTCTTCCCCTC 62.453 72.222 0.00 0.00 40.54 4.30
679 680 4.097361 GGGTGCGTCTTCCCCTCC 62.097 72.222 0.00 0.00 37.89 4.30
680 681 3.003763 GGTGCGTCTTCCCCTCCT 61.004 66.667 0.00 0.00 0.00 3.69
681 682 2.579738 GTGCGTCTTCCCCTCCTC 59.420 66.667 0.00 0.00 0.00 3.71
682 683 3.068691 TGCGTCTTCCCCTCCTCG 61.069 66.667 0.00 0.00 0.00 4.63
683 684 4.516195 GCGTCTTCCCCTCCTCGC 62.516 72.222 0.00 0.00 37.17 5.03
684 685 3.839432 CGTCTTCCCCTCCTCGCC 61.839 72.222 0.00 0.00 0.00 5.54
701 702 2.919856 CCTCGGCCCCTCATCGAT 60.920 66.667 0.00 0.00 32.32 3.59
733 734 3.520569 GCAAGAATCTCTCAGTCTCACC 58.479 50.000 0.00 0.00 0.00 4.02
738 739 0.609406 TCTCTCAGTCTCACCCACCG 60.609 60.000 0.00 0.00 0.00 4.94
740 741 0.039764 TCTCAGTCTCACCCACCGAT 59.960 55.000 0.00 0.00 0.00 4.18
856 858 3.532155 CGGGGAGAGGAGGCGAAG 61.532 72.222 0.00 0.00 0.00 3.79
857 859 3.157949 GGGGAGAGGAGGCGAAGG 61.158 72.222 0.00 0.00 0.00 3.46
890 892 1.669115 GCTGTTCTTGCTCCAGCGA 60.669 57.895 0.00 0.00 45.83 4.93
1218 3375 2.426842 GCTTCCTACAAAGCTGGGAT 57.573 50.000 1.51 0.00 46.51 3.85
1265 3426 3.068064 AAAATTCCGCCCCCGCAG 61.068 61.111 0.00 0.00 34.03 5.18
1348 3584 0.543749 GTGGGACAGGGAAGATGAGG 59.456 60.000 0.00 0.00 41.80 3.86
1349 3585 0.417437 TGGGACAGGGAAGATGAGGA 59.583 55.000 0.00 0.00 0.00 3.71
1350 3586 1.203428 TGGGACAGGGAAGATGAGGAA 60.203 52.381 0.00 0.00 0.00 3.36
1351 3587 1.488393 GGGACAGGGAAGATGAGGAAG 59.512 57.143 0.00 0.00 0.00 3.46
1352 3588 2.472029 GGACAGGGAAGATGAGGAAGA 58.528 52.381 0.00 0.00 0.00 2.87
1353 3589 2.433970 GGACAGGGAAGATGAGGAAGAG 59.566 54.545 0.00 0.00 0.00 2.85
1354 3590 2.433970 GACAGGGAAGATGAGGAAGAGG 59.566 54.545 0.00 0.00 0.00 3.69
1355 3591 2.045047 ACAGGGAAGATGAGGAAGAGGA 59.955 50.000 0.00 0.00 0.00 3.71
1356 3592 2.699846 CAGGGAAGATGAGGAAGAGGAG 59.300 54.545 0.00 0.00 0.00 3.69
1357 3593 2.046292 GGGAAGATGAGGAAGAGGAGG 58.954 57.143 0.00 0.00 0.00 4.30
1358 3594 2.359781 GGGAAGATGAGGAAGAGGAGGA 60.360 54.545 0.00 0.00 0.00 3.71
1359 3595 3.379452 GGAAGATGAGGAAGAGGAGGAA 58.621 50.000 0.00 0.00 0.00 3.36
1360 3596 3.387699 GGAAGATGAGGAAGAGGAGGAAG 59.612 52.174 0.00 0.00 0.00 3.46
1361 3597 4.285863 GAAGATGAGGAAGAGGAGGAAGA 58.714 47.826 0.00 0.00 0.00 2.87
1362 3598 3.914771 AGATGAGGAAGAGGAGGAAGAG 58.085 50.000 0.00 0.00 0.00 2.85
1363 3599 2.541233 TGAGGAAGAGGAGGAAGAGG 57.459 55.000 0.00 0.00 0.00 3.69
1368 3604 2.292587 GGAAGAGGAGGAAGAGGAGGAA 60.293 54.545 0.00 0.00 0.00 3.36
1372 3608 2.243736 GAGGAGGAAGAGGAGGAAGAGA 59.756 54.545 0.00 0.00 0.00 3.10
1818 4697 4.015406 CCACCAGGGCTGCGTACA 62.015 66.667 0.00 0.00 0.00 2.90
1931 4816 1.464734 GAGGTGAGTCGTGATGGAGA 58.535 55.000 0.00 0.00 0.00 3.71
1950 4835 4.566488 GGAGAAGTGTCATGGATTCAGGTT 60.566 45.833 0.00 0.00 0.00 3.50
1982 4867 1.271054 CCTCAAGACACTTGTCCCCAG 60.271 57.143 5.73 0.00 45.85 4.45
2239 5150 6.758593 TTATATTATGGTTTCGCTGACGTC 57.241 37.500 9.11 9.11 41.18 4.34
2262 5176 9.261180 CGTCTTCTATTCACCAACATATGTTAT 57.739 33.333 20.39 12.44 36.32 1.89
2426 5346 2.617274 GGGGCGACACAGCTGTTTC 61.617 63.158 18.94 20.01 37.29 2.78
2464 5384 8.471457 CGTCATTCAATGAAGTGTTTTTGTTAG 58.529 33.333 0.29 0.00 41.69 2.34
2551 5471 9.959721 TTCTCCTAGCATTATGAGTTTAGTTTT 57.040 29.630 0.00 0.00 0.00 2.43
2575 5501 0.405198 ATCACTGGTGGATGTGGCAA 59.595 50.000 0.00 0.00 35.15 4.52
2663 5599 9.793259 TTCAGTTTGAGTCTTATCCTATGTTTT 57.207 29.630 0.00 0.00 0.00 2.43
2671 5607 9.384764 GAGTCTTATCCTATGTTTTATATGGGC 57.615 37.037 0.00 0.00 0.00 5.36
2672 5608 8.890472 AGTCTTATCCTATGTTTTATATGGGCA 58.110 33.333 0.00 0.00 0.00 5.36
2712 5648 8.831000 TCTTTTTAAGCGTCAGTTTTAAGTTC 57.169 30.769 0.00 0.00 0.00 3.01
2716 5652 4.191662 AGCGTCAGTTTTAAGTTCGTTG 57.808 40.909 0.00 0.00 0.00 4.10
2717 5653 2.712466 GCGTCAGTTTTAAGTTCGTTGC 59.288 45.455 0.00 0.00 0.00 4.17
2760 5697 4.244425 TGCTCTTCTCTGTGTGACTTAC 57.756 45.455 0.00 0.00 0.00 2.34
2777 5717 4.884247 ACTTACCAGACTGTACTTTCAGC 58.116 43.478 0.93 0.00 38.84 4.26
2846 5807 0.398318 ACTGGTCTCTGCAACTTCCC 59.602 55.000 0.00 0.00 0.00 3.97
2869 5983 1.134995 GCCAGGCAAAATGCTTCCTAC 60.135 52.381 6.55 0.00 44.28 3.18
2870 5984 2.170166 CCAGGCAAAATGCTTCCTACA 58.830 47.619 2.00 0.00 44.28 2.74
2908 6307 1.687612 CTGGATCCAGCAGGGTGTT 59.312 57.895 28.45 0.00 37.24 3.32
2910 6309 1.133181 TGGATCCAGCAGGGTGTTCA 61.133 55.000 11.44 0.00 38.11 3.18
2932 7873 3.062639 ACTGATGCTAGTTCGATTTTGCG 59.937 43.478 0.00 0.00 0.00 4.85
2949 7890 4.364415 TTGCGGGAAACATAAACTATGC 57.636 40.909 0.00 0.00 39.79 3.14
3076 8353 7.352739 GTGTCATTTTGGTGTAGTAGTTTCAG 58.647 38.462 0.00 0.00 0.00 3.02
3117 8394 3.060615 GCAGAGTGCTTGGCCAGG 61.061 66.667 11.24 11.24 40.96 4.45
3148 8426 0.179020 CATTTCCGGCCATGCTCCTA 60.179 55.000 2.24 0.00 0.00 2.94
3164 8443 3.306641 GCTCCTATCCATACAAGAGCCTG 60.307 52.174 0.00 0.00 40.62 4.85
3213 8500 4.862574 TCTTTTATCGGAGTGTCGTCAATG 59.137 41.667 0.00 0.00 0.00 2.82
3257 8546 1.140652 CTCTTCCCCTCTTCATCAGGC 59.859 57.143 0.00 0.00 0.00 4.85
3272 8562 5.726397 TCATCAGGCCAAAAATGAGAAATG 58.274 37.500 5.01 0.00 0.00 2.32
3277 8567 6.482973 TCAGGCCAAAAATGAGAAATGAAAAC 59.517 34.615 5.01 0.00 0.00 2.43
3351 8641 4.391216 CCGCCTCATCATGATCATCTAAAC 59.609 45.833 4.86 0.00 0.00 2.01
3358 8648 9.327628 CTCATCATGATCATCTAAACAAGAAGT 57.672 33.333 4.86 0.00 37.89 3.01
3363 8653 7.912056 TGATCATCTAAACAAGAAGTGGAAG 57.088 36.000 0.00 0.00 37.89 3.46
3391 8683 2.004408 ATGGAGAATGCAGGGGGAGC 62.004 60.000 0.00 0.00 42.42 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.170151 GTGTAAATTTTCAGGGCAAAATACGTT 59.830 33.333 0.00 0.00 35.35 3.99
2 3 6.643360 GTGTAAATTTTCAGGGCAAAATACGT 59.357 34.615 0.00 0.00 35.35 3.57
5 6 5.635700 GCGTGTAAATTTTCAGGGCAAAATA 59.364 36.000 16.11 0.00 35.35 1.40
6 7 4.450757 GCGTGTAAATTTTCAGGGCAAAAT 59.549 37.500 16.11 0.00 37.53 1.82
7 8 3.804873 GCGTGTAAATTTTCAGGGCAAAA 59.195 39.130 16.11 0.00 0.00 2.44
9 10 2.625790 AGCGTGTAAATTTTCAGGGCAA 59.374 40.909 16.11 0.00 0.00 4.52
11 12 2.986479 CAAGCGTGTAAATTTTCAGGGC 59.014 45.455 16.11 13.40 0.00 5.19
12 13 3.980775 CACAAGCGTGTAAATTTTCAGGG 59.019 43.478 16.11 5.79 38.41 4.45
26 27 2.093181 TGGAGGCATAATACACAAGCGT 60.093 45.455 0.00 0.00 0.00 5.07
27 28 2.560504 TGGAGGCATAATACACAAGCG 58.439 47.619 0.00 0.00 0.00 4.68
28 29 3.885297 ACATGGAGGCATAATACACAAGC 59.115 43.478 0.00 0.00 0.00 4.01
29 30 9.102757 GATATACATGGAGGCATAATACACAAG 57.897 37.037 0.00 0.00 0.00 3.16
30 31 8.825774 AGATATACATGGAGGCATAATACACAA 58.174 33.333 0.00 0.00 0.00 3.33
31 32 8.260114 CAGATATACATGGAGGCATAATACACA 58.740 37.037 0.00 0.00 0.00 3.72
32 33 8.260818 ACAGATATACATGGAGGCATAATACAC 58.739 37.037 0.00 0.00 0.00 2.90
33 34 8.379428 ACAGATATACATGGAGGCATAATACA 57.621 34.615 0.00 0.00 0.00 2.29
38 39 9.890629 GAAAATACAGATATACATGGAGGCATA 57.109 33.333 0.00 0.00 0.00 3.14
39 40 8.609483 AGAAAATACAGATATACATGGAGGCAT 58.391 33.333 0.00 0.00 0.00 4.40
40 41 7.977818 AGAAAATACAGATATACATGGAGGCA 58.022 34.615 0.00 0.00 0.00 4.75
41 42 8.854614 AAGAAAATACAGATATACATGGAGGC 57.145 34.615 0.00 0.00 0.00 4.70
100 101 9.840427 GGTCTAGAAAAATTCAAAATTCATCGA 57.160 29.630 0.00 0.00 0.00 3.59
101 102 8.788813 CGGTCTAGAAAAATTCAAAATTCATCG 58.211 33.333 0.00 0.00 0.00 3.84
102 103 9.840427 TCGGTCTAGAAAAATTCAAAATTCATC 57.160 29.630 0.00 0.00 0.00 2.92
103 104 9.846248 CTCGGTCTAGAAAAATTCAAAATTCAT 57.154 29.630 0.00 0.00 0.00 2.57
104 105 9.062524 TCTCGGTCTAGAAAAATTCAAAATTCA 57.937 29.630 0.00 0.00 0.00 2.57
107 108 8.678199 GGATCTCGGTCTAGAAAAATTCAAAAT 58.322 33.333 0.00 0.00 0.00 1.82
108 109 7.120726 GGGATCTCGGTCTAGAAAAATTCAAAA 59.879 37.037 0.00 0.00 0.00 2.44
109 110 6.598064 GGGATCTCGGTCTAGAAAAATTCAAA 59.402 38.462 0.00 0.00 0.00 2.69
110 111 6.070194 AGGGATCTCGGTCTAGAAAAATTCAA 60.070 38.462 0.00 0.00 0.00 2.69
111 112 5.425539 AGGGATCTCGGTCTAGAAAAATTCA 59.574 40.000 0.00 0.00 0.00 2.57
112 113 5.755861 CAGGGATCTCGGTCTAGAAAAATTC 59.244 44.000 0.00 0.00 0.00 2.17
113 114 5.396884 CCAGGGATCTCGGTCTAGAAAAATT 60.397 44.000 0.00 0.00 0.00 1.82
114 115 4.101741 CCAGGGATCTCGGTCTAGAAAAAT 59.898 45.833 0.00 0.00 0.00 1.82
115 116 3.451178 CCAGGGATCTCGGTCTAGAAAAA 59.549 47.826 0.00 0.00 0.00 1.94
116 117 3.031736 CCAGGGATCTCGGTCTAGAAAA 58.968 50.000 0.00 0.00 0.00 2.29
117 118 2.243994 TCCAGGGATCTCGGTCTAGAAA 59.756 50.000 0.00 0.00 0.00 2.52
118 119 1.850998 TCCAGGGATCTCGGTCTAGAA 59.149 52.381 0.00 0.00 0.00 2.10
119 120 1.422024 CTCCAGGGATCTCGGTCTAGA 59.578 57.143 3.83 0.00 0.00 2.43
120 121 1.904287 CTCCAGGGATCTCGGTCTAG 58.096 60.000 3.83 0.00 0.00 2.43
121 122 0.178987 GCTCCAGGGATCTCGGTCTA 60.179 60.000 3.83 0.00 0.00 2.59
122 123 1.456705 GCTCCAGGGATCTCGGTCT 60.457 63.158 3.83 0.00 0.00 3.85
123 124 1.456705 AGCTCCAGGGATCTCGGTC 60.457 63.158 3.83 0.00 0.00 4.79
124 125 1.456705 GAGCTCCAGGGATCTCGGT 60.457 63.158 0.87 0.00 29.54 4.69
125 126 3.453988 GAGCTCCAGGGATCTCGG 58.546 66.667 0.87 0.00 29.54 4.63
127 128 2.866726 GCCGAGCTCCAGGGATCTC 61.867 68.421 8.47 8.75 34.95 2.75
128 129 2.841988 GCCGAGCTCCAGGGATCT 60.842 66.667 8.47 0.00 0.00 2.75
129 130 3.934962 GGCCGAGCTCCAGGGATC 61.935 72.222 8.47 0.00 0.00 3.36
130 131 4.488911 AGGCCGAGCTCCAGGGAT 62.489 66.667 8.47 0.00 0.00 3.85
135 136 2.927856 TTTGGAGGCCGAGCTCCA 60.928 61.111 8.47 7.35 46.84 3.86
136 137 2.124942 CTTTGGAGGCCGAGCTCC 60.125 66.667 8.47 0.00 40.05 4.70
137 138 2.124942 CCTTTGGAGGCCGAGCTC 60.125 66.667 2.73 2.73 35.94 4.09
145 146 3.139077 GTCCGTATATTGCCTTTGGAGG 58.861 50.000 0.00 0.00 46.50 4.30
146 147 3.804036 TGTCCGTATATTGCCTTTGGAG 58.196 45.455 0.00 0.00 0.00 3.86
147 148 3.916359 TGTCCGTATATTGCCTTTGGA 57.084 42.857 0.00 0.00 0.00 3.53
148 149 4.974368 TTTGTCCGTATATTGCCTTTGG 57.026 40.909 0.00 0.00 0.00 3.28
149 150 6.559810 TGAATTTGTCCGTATATTGCCTTTG 58.440 36.000 0.00 0.00 0.00 2.77
150 151 6.767524 TGAATTTGTCCGTATATTGCCTTT 57.232 33.333 0.00 0.00 0.00 3.11
151 152 6.545666 TGATGAATTTGTCCGTATATTGCCTT 59.454 34.615 0.00 0.00 0.00 4.35
152 153 6.061441 TGATGAATTTGTCCGTATATTGCCT 58.939 36.000 0.00 0.00 0.00 4.75
153 154 6.312399 TGATGAATTTGTCCGTATATTGCC 57.688 37.500 0.00 0.00 0.00 4.52
157 158 8.604035 GCGATTATGATGAATTTGTCCGTATAT 58.396 33.333 0.00 0.00 0.00 0.86
158 159 7.817478 AGCGATTATGATGAATTTGTCCGTATA 59.183 33.333 0.00 0.00 0.00 1.47
159 160 6.650807 AGCGATTATGATGAATTTGTCCGTAT 59.349 34.615 0.00 0.00 0.00 3.06
160 161 5.989168 AGCGATTATGATGAATTTGTCCGTA 59.011 36.000 0.00 0.00 0.00 4.02
161 162 4.816385 AGCGATTATGATGAATTTGTCCGT 59.184 37.500 0.00 0.00 0.00 4.69
162 163 5.348418 AGCGATTATGATGAATTTGTCCG 57.652 39.130 0.00 0.00 0.00 4.79
163 164 5.848036 CGAAGCGATTATGATGAATTTGTCC 59.152 40.000 0.00 0.00 0.00 4.02
164 165 5.848036 CCGAAGCGATTATGATGAATTTGTC 59.152 40.000 0.00 0.00 0.00 3.18
165 166 5.296780 ACCGAAGCGATTATGATGAATTTGT 59.703 36.000 0.00 0.00 0.00 2.83
166 167 5.751680 ACCGAAGCGATTATGATGAATTTG 58.248 37.500 0.00 0.00 0.00 2.32
167 168 5.760253 AGACCGAAGCGATTATGATGAATTT 59.240 36.000 0.00 0.00 0.00 1.82
168 169 5.178252 CAGACCGAAGCGATTATGATGAATT 59.822 40.000 0.00 0.00 0.00 2.17
169 170 4.687948 CAGACCGAAGCGATTATGATGAAT 59.312 41.667 0.00 0.00 0.00 2.57
170 171 4.051237 CAGACCGAAGCGATTATGATGAA 58.949 43.478 0.00 0.00 0.00 2.57
171 172 3.642705 CAGACCGAAGCGATTATGATGA 58.357 45.455 0.00 0.00 0.00 2.92
172 173 2.156504 GCAGACCGAAGCGATTATGATG 59.843 50.000 0.00 0.00 0.00 3.07
173 174 2.224042 TGCAGACCGAAGCGATTATGAT 60.224 45.455 0.00 0.00 0.00 2.45
174 175 1.136110 TGCAGACCGAAGCGATTATGA 59.864 47.619 0.00 0.00 0.00 2.15
175 176 1.570813 TGCAGACCGAAGCGATTATG 58.429 50.000 0.00 0.00 0.00 1.90
176 177 2.138320 CATGCAGACCGAAGCGATTAT 58.862 47.619 0.00 0.00 0.00 1.28
177 178 1.570813 CATGCAGACCGAAGCGATTA 58.429 50.000 0.00 0.00 0.00 1.75
178 179 1.091771 CCATGCAGACCGAAGCGATT 61.092 55.000 0.00 0.00 0.00 3.34
179 180 1.522355 CCATGCAGACCGAAGCGAT 60.522 57.895 0.00 0.00 0.00 4.58
180 181 2.125552 CCATGCAGACCGAAGCGA 60.126 61.111 0.00 0.00 0.00 4.93
181 182 3.869272 GCCATGCAGACCGAAGCG 61.869 66.667 0.00 0.00 0.00 4.68
182 183 2.437359 AGCCATGCAGACCGAAGC 60.437 61.111 0.00 0.00 0.00 3.86
183 184 2.110967 CCAGCCATGCAGACCGAAG 61.111 63.158 0.00 0.00 0.00 3.79
184 185 1.913951 ATCCAGCCATGCAGACCGAA 61.914 55.000 0.00 0.00 0.00 4.30
185 186 1.048160 TATCCAGCCATGCAGACCGA 61.048 55.000 0.00 0.00 0.00 4.69
186 187 0.602106 CTATCCAGCCATGCAGACCG 60.602 60.000 0.00 0.00 0.00 4.79
187 188 0.471617 ACTATCCAGCCATGCAGACC 59.528 55.000 0.00 0.00 0.00 3.85
188 189 3.692257 ATACTATCCAGCCATGCAGAC 57.308 47.619 0.00 0.00 0.00 3.51
189 190 7.681259 ATTATATACTATCCAGCCATGCAGA 57.319 36.000 0.00 0.00 0.00 4.26
190 191 8.743085 AAATTATATACTATCCAGCCATGCAG 57.257 34.615 0.00 0.00 0.00 4.41
191 192 8.959548 CAAAATTATATACTATCCAGCCATGCA 58.040 33.333 0.00 0.00 0.00 3.96
192 193 8.960591 ACAAAATTATATACTATCCAGCCATGC 58.039 33.333 0.00 0.00 0.00 4.06
241 242 5.644636 TCGGTTTCCAACTCGCTATATTTTT 59.355 36.000 0.00 0.00 0.00 1.94
242 243 5.180271 TCGGTTTCCAACTCGCTATATTTT 58.820 37.500 0.00 0.00 0.00 1.82
243 244 4.761975 TCGGTTTCCAACTCGCTATATTT 58.238 39.130 0.00 0.00 0.00 1.40
244 245 4.395959 TCGGTTTCCAACTCGCTATATT 57.604 40.909 0.00 0.00 0.00 1.28
245 246 4.117685 GTTCGGTTTCCAACTCGCTATAT 58.882 43.478 0.00 0.00 0.00 0.86
246 247 3.056678 TGTTCGGTTTCCAACTCGCTATA 60.057 43.478 0.00 0.00 0.00 1.31
247 248 2.289195 TGTTCGGTTTCCAACTCGCTAT 60.289 45.455 0.00 0.00 0.00 2.97
248 249 1.068895 TGTTCGGTTTCCAACTCGCTA 59.931 47.619 0.00 0.00 0.00 4.26
249 250 0.179067 TGTTCGGTTTCCAACTCGCT 60.179 50.000 0.00 0.00 0.00 4.93
250 251 0.658897 TTGTTCGGTTTCCAACTCGC 59.341 50.000 0.00 0.00 0.00 5.03
251 252 3.242936 ACAATTGTTCGGTTTCCAACTCG 60.243 43.478 4.92 0.00 0.00 4.18
252 253 4.041723 CACAATTGTTCGGTTTCCAACTC 58.958 43.478 8.77 0.00 0.00 3.01
253 254 3.181480 CCACAATTGTTCGGTTTCCAACT 60.181 43.478 8.77 0.00 0.00 3.16
254 255 3.120041 CCACAATTGTTCGGTTTCCAAC 58.880 45.455 8.77 0.00 0.00 3.77
255 256 3.024547 TCCACAATTGTTCGGTTTCCAA 58.975 40.909 8.77 0.00 0.00 3.53
256 257 2.359531 GTCCACAATTGTTCGGTTTCCA 59.640 45.455 8.77 0.00 0.00 3.53
257 258 2.359531 TGTCCACAATTGTTCGGTTTCC 59.640 45.455 8.77 0.20 0.00 3.13
258 259 3.701532 TGTCCACAATTGTTCGGTTTC 57.298 42.857 8.77 4.87 0.00 2.78
259 260 4.081917 AGTTTGTCCACAATTGTTCGGTTT 60.082 37.500 8.77 0.00 35.55 3.27
260 261 3.445805 AGTTTGTCCACAATTGTTCGGTT 59.554 39.130 8.77 0.00 35.55 4.44
261 262 3.020984 AGTTTGTCCACAATTGTTCGGT 58.979 40.909 8.77 0.00 35.55 4.69
262 263 3.066064 TGAGTTTGTCCACAATTGTTCGG 59.934 43.478 8.77 8.53 35.55 4.30
263 264 4.285807 TGAGTTTGTCCACAATTGTTCG 57.714 40.909 8.77 2.00 35.55 3.95
264 265 6.756074 TCATTTGAGTTTGTCCACAATTGTTC 59.244 34.615 8.77 1.94 35.55 3.18
265 266 6.534793 GTCATTTGAGTTTGTCCACAATTGTT 59.465 34.615 8.77 0.00 35.55 2.83
266 267 6.042143 GTCATTTGAGTTTGTCCACAATTGT 58.958 36.000 4.92 4.92 35.55 2.71
267 268 6.041511 TGTCATTTGAGTTTGTCCACAATTG 58.958 36.000 3.24 3.24 35.55 2.32
268 269 6.219417 TGTCATTTGAGTTTGTCCACAATT 57.781 33.333 0.00 0.00 35.55 2.32
269 270 5.850557 TGTCATTTGAGTTTGTCCACAAT 57.149 34.783 0.00 0.00 35.55 2.71
270 271 5.850557 ATGTCATTTGAGTTTGTCCACAA 57.149 34.783 0.00 0.00 0.00 3.33
271 272 5.850557 AATGTCATTTGAGTTTGTCCACA 57.149 34.783 0.00 0.00 0.00 4.17
272 273 8.702438 CATTAAATGTCATTTGAGTTTGTCCAC 58.298 33.333 19.10 0.00 33.82 4.02
273 274 8.420222 ACATTAAATGTCATTTGAGTTTGTCCA 58.580 29.630 19.10 0.00 39.92 4.02
274 275 8.816640 ACATTAAATGTCATTTGAGTTTGTCC 57.183 30.769 19.10 0.00 39.92 4.02
276 277 9.260002 GGAACATTAAATGTCATTTGAGTTTGT 57.740 29.630 19.10 10.47 44.07 2.83
277 278 8.711457 GGGAACATTAAATGTCATTTGAGTTTG 58.289 33.333 19.10 9.92 44.07 2.93
278 279 8.428063 TGGGAACATTAAATGTCATTTGAGTTT 58.572 29.630 19.10 9.15 44.07 2.66
279 280 7.961351 TGGGAACATTAAATGTCATTTGAGTT 58.039 30.769 19.10 18.10 44.07 3.01
280 281 7.537596 TGGGAACATTAAATGTCATTTGAGT 57.462 32.000 19.10 12.02 44.07 3.41
281 282 8.830201 TTTGGGAACATTAAATGTCATTTGAG 57.170 30.769 19.10 11.48 44.07 3.02
282 283 9.618890 TTTTTGGGAACATTAAATGTCATTTGA 57.381 25.926 19.10 12.44 44.07 2.69
283 284 9.881529 CTTTTTGGGAACATTAAATGTCATTTG 57.118 29.630 19.10 7.49 44.07 2.32
284 285 9.065798 CCTTTTTGGGAACATTAAATGTCATTT 57.934 29.630 14.98 14.98 44.07 2.32
285 286 8.435982 TCCTTTTTGGGAACATTAAATGTCATT 58.564 29.630 0.00 0.00 42.32 2.57
286 287 7.972301 TCCTTTTTGGGAACATTAAATGTCAT 58.028 30.769 0.00 0.00 42.32 3.06
287 288 7.366847 TCCTTTTTGGGAACATTAAATGTCA 57.633 32.000 0.00 0.00 42.32 3.58
288 289 6.368791 GCTCCTTTTTGGGAACATTAAATGTC 59.631 38.462 0.00 0.00 42.32 3.06
289 290 6.230472 GCTCCTTTTTGGGAACATTAAATGT 58.770 36.000 0.00 0.00 42.32 2.71
290 291 5.643348 GGCTCCTTTTTGGGAACATTAAATG 59.357 40.000 0.00 0.00 42.32 2.32
291 292 5.309282 TGGCTCCTTTTTGGGAACATTAAAT 59.691 36.000 0.00 0.00 42.32 1.40
292 293 4.656112 TGGCTCCTTTTTGGGAACATTAAA 59.344 37.500 0.00 0.00 42.32 1.52
293 294 4.227197 TGGCTCCTTTTTGGGAACATTAA 58.773 39.130 0.00 0.00 42.32 1.40
294 295 3.831911 CTGGCTCCTTTTTGGGAACATTA 59.168 43.478 0.00 0.00 42.32 1.90
295 296 2.634453 CTGGCTCCTTTTTGGGAACATT 59.366 45.455 0.00 0.00 42.32 2.71
296 297 2.158325 TCTGGCTCCTTTTTGGGAACAT 60.158 45.455 0.00 0.00 42.32 2.71
297 298 1.216678 TCTGGCTCCTTTTTGGGAACA 59.783 47.619 0.00 0.00 34.66 3.18
298 299 1.889170 CTCTGGCTCCTTTTTGGGAAC 59.111 52.381 0.00 0.00 34.66 3.62
299 300 1.780309 TCTCTGGCTCCTTTTTGGGAA 59.220 47.619 0.00 0.00 34.66 3.97
300 301 1.444933 TCTCTGGCTCCTTTTTGGGA 58.555 50.000 0.00 0.00 36.20 4.37
301 302 2.025510 AGATCTCTGGCTCCTTTTTGGG 60.026 50.000 0.00 0.00 36.20 4.12
302 303 3.277715 GAGATCTCTGGCTCCTTTTTGG 58.722 50.000 15.80 0.00 37.10 3.28
303 304 3.277715 GGAGATCTCTGGCTCCTTTTTG 58.722 50.000 21.81 0.00 45.72 2.44
304 305 3.643199 GGAGATCTCTGGCTCCTTTTT 57.357 47.619 21.81 0.00 45.72 1.94
310 311 0.757512 TGCATGGAGATCTCTGGCTC 59.242 55.000 21.81 5.87 0.00 4.70
311 312 1.141254 CTTGCATGGAGATCTCTGGCT 59.859 52.381 21.81 2.28 0.00 4.75
312 313 1.595466 CTTGCATGGAGATCTCTGGC 58.405 55.000 21.81 20.65 0.00 4.85
313 314 1.134189 TGCTTGCATGGAGATCTCTGG 60.134 52.381 21.81 12.47 0.00 3.86
314 315 2.327200 TGCTTGCATGGAGATCTCTG 57.673 50.000 21.81 14.24 0.00 3.35
315 316 2.641305 GTTGCTTGCATGGAGATCTCT 58.359 47.619 21.81 0.23 0.00 3.10
316 317 1.674962 GGTTGCTTGCATGGAGATCTC 59.325 52.381 14.75 14.75 0.00 2.75
317 318 1.005097 TGGTTGCTTGCATGGAGATCT 59.995 47.619 0.00 0.00 0.00 2.75
318 319 1.466856 TGGTTGCTTGCATGGAGATC 58.533 50.000 1.34 0.00 0.00 2.75
319 320 1.822990 CTTGGTTGCTTGCATGGAGAT 59.177 47.619 1.34 0.00 0.00 2.75
320 321 1.250328 CTTGGTTGCTTGCATGGAGA 58.750 50.000 1.34 0.00 0.00 3.71
321 322 0.245539 CCTTGGTTGCTTGCATGGAG 59.754 55.000 1.34 0.00 0.00 3.86
322 323 0.178967 TCCTTGGTTGCTTGCATGGA 60.179 50.000 1.34 0.00 0.00 3.41
323 324 0.245539 CTCCTTGGTTGCTTGCATGG 59.754 55.000 1.34 0.00 0.00 3.66
324 325 1.250328 TCTCCTTGGTTGCTTGCATG 58.750 50.000 0.00 0.00 0.00 4.06
325 326 1.822990 CATCTCCTTGGTTGCTTGCAT 59.177 47.619 0.00 0.00 0.00 3.96
326 327 1.250328 CATCTCCTTGGTTGCTTGCA 58.750 50.000 0.00 0.00 0.00 4.08
327 328 1.251251 ACATCTCCTTGGTTGCTTGC 58.749 50.000 0.00 0.00 0.00 4.01
328 329 6.599244 TCTTAATACATCTCCTTGGTTGCTTG 59.401 38.462 0.00 0.00 0.00 4.01
329 330 6.721318 TCTTAATACATCTCCTTGGTTGCTT 58.279 36.000 0.00 0.00 0.00 3.91
330 331 6.313519 TCTTAATACATCTCCTTGGTTGCT 57.686 37.500 0.00 0.00 0.00 3.91
331 332 6.073548 CGATCTTAATACATCTCCTTGGTTGC 60.074 42.308 0.00 0.00 0.00 4.17
332 333 7.210174 TCGATCTTAATACATCTCCTTGGTTG 58.790 38.462 0.00 0.00 0.00 3.77
333 334 7.361457 TCGATCTTAATACATCTCCTTGGTT 57.639 36.000 0.00 0.00 0.00 3.67
334 335 6.978674 TCGATCTTAATACATCTCCTTGGT 57.021 37.500 0.00 0.00 0.00 3.67
335 336 8.662781 TTTTCGATCTTAATACATCTCCTTGG 57.337 34.615 0.00 0.00 0.00 3.61
370 371 7.569639 TGTATTGTCTAGAGAGTGGTATCAC 57.430 40.000 0.00 0.00 43.93 3.06
371 372 8.589701 TTTGTATTGTCTAGAGAGTGGTATCA 57.410 34.615 0.00 0.00 0.00 2.15
372 373 9.469807 CATTTGTATTGTCTAGAGAGTGGTATC 57.530 37.037 0.00 0.00 0.00 2.24
373 374 8.982723 ACATTTGTATTGTCTAGAGAGTGGTAT 58.017 33.333 0.00 0.00 0.00 2.73
374 375 8.362464 ACATTTGTATTGTCTAGAGAGTGGTA 57.638 34.615 0.00 0.00 0.00 3.25
375 376 7.246171 ACATTTGTATTGTCTAGAGAGTGGT 57.754 36.000 0.00 0.00 0.00 4.16
376 377 6.473778 CGACATTTGTATTGTCTAGAGAGTGG 59.526 42.308 0.00 0.00 41.05 4.00
377 378 7.251281 TCGACATTTGTATTGTCTAGAGAGTG 58.749 38.462 0.00 0.00 41.05 3.51
378 379 7.392494 TCGACATTTGTATTGTCTAGAGAGT 57.608 36.000 0.00 0.00 41.05 3.24
379 380 8.689251 TTTCGACATTTGTATTGTCTAGAGAG 57.311 34.615 0.00 0.00 41.05 3.20
380 381 9.087424 CATTTCGACATTTGTATTGTCTAGAGA 57.913 33.333 0.00 0.00 41.05 3.10
381 382 8.873830 ACATTTCGACATTTGTATTGTCTAGAG 58.126 33.333 0.00 0.00 41.05 2.43
382 383 8.655970 CACATTTCGACATTTGTATTGTCTAGA 58.344 33.333 0.00 0.00 41.05 2.43
383 384 7.904977 CCACATTTCGACATTTGTATTGTCTAG 59.095 37.037 2.73 0.00 41.05 2.43
384 385 7.389330 ACCACATTTCGACATTTGTATTGTCTA 59.611 33.333 2.73 0.00 41.05 2.59
385 386 6.206634 ACCACATTTCGACATTTGTATTGTCT 59.793 34.615 2.73 0.00 41.05 3.41
386 387 6.305399 CACCACATTTCGACATTTGTATTGTC 59.695 38.462 0.00 0.00 40.06 3.18
387 388 6.148948 CACCACATTTCGACATTTGTATTGT 58.851 36.000 0.00 0.00 0.00 2.71
388 389 5.060816 GCACCACATTTCGACATTTGTATTG 59.939 40.000 0.00 0.00 0.00 1.90
389 390 5.160641 GCACCACATTTCGACATTTGTATT 58.839 37.500 0.00 0.00 0.00 1.89
390 391 4.217334 TGCACCACATTTCGACATTTGTAT 59.783 37.500 0.00 0.00 0.00 2.29
391 392 3.565902 TGCACCACATTTCGACATTTGTA 59.434 39.130 0.00 0.00 0.00 2.41
392 393 2.360483 TGCACCACATTTCGACATTTGT 59.640 40.909 0.00 0.00 0.00 2.83
393 394 3.010624 TGCACCACATTTCGACATTTG 57.989 42.857 0.00 0.00 0.00 2.32
394 395 3.724508 TTGCACCACATTTCGACATTT 57.275 38.095 0.00 0.00 0.00 2.32
395 396 3.724508 TTTGCACCACATTTCGACATT 57.275 38.095 0.00 0.00 0.00 2.71
396 397 3.940209 ATTTGCACCACATTTCGACAT 57.060 38.095 0.00 0.00 0.00 3.06
397 398 3.818210 ACTATTTGCACCACATTTCGACA 59.182 39.130 0.00 0.00 0.00 4.35
398 399 4.083537 TGACTATTTGCACCACATTTCGAC 60.084 41.667 0.00 0.00 0.00 4.20
399 400 4.068599 TGACTATTTGCACCACATTTCGA 58.931 39.130 0.00 0.00 0.00 3.71
400 401 4.418013 TGACTATTTGCACCACATTTCG 57.582 40.909 0.00 0.00 0.00 3.46
401 402 5.953183 TCATGACTATTTGCACCACATTTC 58.047 37.500 0.00 0.00 0.00 2.17
402 403 5.981088 TCATGACTATTTGCACCACATTT 57.019 34.783 0.00 0.00 0.00 2.32
403 404 5.336690 GGTTCATGACTATTTGCACCACATT 60.337 40.000 0.00 0.00 0.00 2.71
404 405 4.158394 GGTTCATGACTATTTGCACCACAT 59.842 41.667 0.00 0.00 0.00 3.21
405 406 3.505680 GGTTCATGACTATTTGCACCACA 59.494 43.478 0.00 0.00 0.00 4.17
406 407 3.505680 TGGTTCATGACTATTTGCACCAC 59.494 43.478 7.41 0.00 0.00 4.16
407 408 3.760738 TGGTTCATGACTATTTGCACCA 58.239 40.909 7.41 7.41 0.00 4.17
408 409 4.989279 ATGGTTCATGACTATTTGCACC 57.011 40.909 0.00 0.00 0.00 5.01
409 410 6.389091 TGAAATGGTTCATGACTATTTGCAC 58.611 36.000 17.68 3.66 45.83 4.57
410 411 6.433716 TCTGAAATGGTTCATGACTATTTGCA 59.566 34.615 17.68 14.62 45.83 4.08
411 412 6.855836 TCTGAAATGGTTCATGACTATTTGC 58.144 36.000 17.68 12.31 45.83 3.68
412 413 8.733458 TCTTCTGAAATGGTTCATGACTATTTG 58.267 33.333 17.68 9.38 45.83 2.32
414 415 8.868522 TTCTTCTGAAATGGTTCATGACTATT 57.131 30.769 0.00 0.00 42.85 1.73
415 416 8.868522 TTTCTTCTGAAATGGTTCATGACTAT 57.131 30.769 0.00 0.00 42.85 2.12
460 461 9.672086 CAGGTGTAAAGTAAATTTTGATTCGAA 57.328 29.630 0.00 0.00 32.01 3.71
461 462 9.058174 TCAGGTGTAAAGTAAATTTTGATTCGA 57.942 29.630 0.00 0.00 32.01 3.71
462 463 9.329913 CTCAGGTGTAAAGTAAATTTTGATTCG 57.670 33.333 0.00 0.00 32.01 3.34
467 468 9.796120 TGTTTCTCAGGTGTAAAGTAAATTTTG 57.204 29.630 0.00 0.00 32.01 2.44
469 470 9.965824 CATGTTTCTCAGGTGTAAAGTAAATTT 57.034 29.630 0.00 0.00 34.72 1.82
470 471 8.576442 CCATGTTTCTCAGGTGTAAAGTAAATT 58.424 33.333 0.00 0.00 0.00 1.82
471 472 7.942341 TCCATGTTTCTCAGGTGTAAAGTAAAT 59.058 33.333 0.00 0.00 0.00 1.40
472 473 7.284074 TCCATGTTTCTCAGGTGTAAAGTAAA 58.716 34.615 0.00 0.00 0.00 2.01
473 474 6.833041 TCCATGTTTCTCAGGTGTAAAGTAA 58.167 36.000 0.00 0.00 0.00 2.24
474 475 6.428083 TCCATGTTTCTCAGGTGTAAAGTA 57.572 37.500 0.00 0.00 0.00 2.24
475 476 5.304686 TCCATGTTTCTCAGGTGTAAAGT 57.695 39.130 0.00 0.00 0.00 2.66
476 477 5.997746 TCTTCCATGTTTCTCAGGTGTAAAG 59.002 40.000 0.00 0.00 0.00 1.85
477 478 5.763204 GTCTTCCATGTTTCTCAGGTGTAAA 59.237 40.000 0.00 0.00 0.00 2.01
478 479 5.163248 TGTCTTCCATGTTTCTCAGGTGTAA 60.163 40.000 0.00 0.00 0.00 2.41
479 480 4.346709 TGTCTTCCATGTTTCTCAGGTGTA 59.653 41.667 0.00 0.00 0.00 2.90
480 481 3.136443 TGTCTTCCATGTTTCTCAGGTGT 59.864 43.478 0.00 0.00 0.00 4.16
481 482 3.743521 TGTCTTCCATGTTTCTCAGGTG 58.256 45.455 0.00 0.00 0.00 4.00
482 483 4.437682 TTGTCTTCCATGTTTCTCAGGT 57.562 40.909 0.00 0.00 0.00 4.00
483 484 5.772825 TTTTGTCTTCCATGTTTCTCAGG 57.227 39.130 0.00 0.00 0.00 3.86
484 485 6.208204 AGGATTTTGTCTTCCATGTTTCTCAG 59.792 38.462 0.00 0.00 34.27 3.35
485 486 6.070656 AGGATTTTGTCTTCCATGTTTCTCA 58.929 36.000 0.00 0.00 34.27 3.27
486 487 6.432472 AGAGGATTTTGTCTTCCATGTTTCTC 59.568 38.462 0.00 0.00 33.63 2.87
487 488 6.208204 CAGAGGATTTTGTCTTCCATGTTTCT 59.792 38.462 0.00 0.00 33.63 2.52
488 489 6.207417 TCAGAGGATTTTGTCTTCCATGTTTC 59.793 38.462 0.00 0.00 33.63 2.78
489 490 6.070656 TCAGAGGATTTTGTCTTCCATGTTT 58.929 36.000 0.00 0.00 33.63 2.83
490 491 5.634118 TCAGAGGATTTTGTCTTCCATGTT 58.366 37.500 0.00 0.00 33.63 2.71
491 492 5.246981 TCAGAGGATTTTGTCTTCCATGT 57.753 39.130 0.00 0.00 33.63 3.21
492 493 6.579666 TTTCAGAGGATTTTGTCTTCCATG 57.420 37.500 0.00 0.00 33.63 3.66
493 494 7.069826 TGTTTTTCAGAGGATTTTGTCTTCCAT 59.930 33.333 0.00 0.00 33.63 3.41
494 495 6.379703 TGTTTTTCAGAGGATTTTGTCTTCCA 59.620 34.615 0.00 0.00 33.63 3.53
495 496 6.805713 TGTTTTTCAGAGGATTTTGTCTTCC 58.194 36.000 0.00 0.00 33.63 3.46
496 497 8.355913 AGATGTTTTTCAGAGGATTTTGTCTTC 58.644 33.333 0.00 0.00 33.35 2.87
497 498 8.139989 CAGATGTTTTTCAGAGGATTTTGTCTT 58.860 33.333 0.00 0.00 0.00 3.01
498 499 7.503566 TCAGATGTTTTTCAGAGGATTTTGTCT 59.496 33.333 0.00 0.00 0.00 3.41
499 500 7.651808 TCAGATGTTTTTCAGAGGATTTTGTC 58.348 34.615 0.00 0.00 0.00 3.18
500 501 7.587037 TCAGATGTTTTTCAGAGGATTTTGT 57.413 32.000 0.00 0.00 0.00 2.83
501 502 8.876275 TTTCAGATGTTTTTCAGAGGATTTTG 57.124 30.769 0.00 0.00 0.00 2.44
506 507 8.299570 GCTTTATTTCAGATGTTTTTCAGAGGA 58.700 33.333 0.00 0.00 0.00 3.71
507 508 7.272084 CGCTTTATTTCAGATGTTTTTCAGAGG 59.728 37.037 0.00 0.00 0.00 3.69
508 509 7.272084 CCGCTTTATTTCAGATGTTTTTCAGAG 59.728 37.037 0.00 0.00 0.00 3.35
509 510 7.040755 TCCGCTTTATTTCAGATGTTTTTCAGA 60.041 33.333 0.00 0.00 0.00 3.27
510 511 7.083858 TCCGCTTTATTTCAGATGTTTTTCAG 58.916 34.615 0.00 0.00 0.00 3.02
511 512 6.976088 TCCGCTTTATTTCAGATGTTTTTCA 58.024 32.000 0.00 0.00 0.00 2.69
512 513 7.867445 TTCCGCTTTATTTCAGATGTTTTTC 57.133 32.000 0.00 0.00 0.00 2.29
513 514 7.384932 CCTTTCCGCTTTATTTCAGATGTTTTT 59.615 33.333 0.00 0.00 0.00 1.94
514 515 6.868339 CCTTTCCGCTTTATTTCAGATGTTTT 59.132 34.615 0.00 0.00 0.00 2.43
515 516 6.208599 TCCTTTCCGCTTTATTTCAGATGTTT 59.791 34.615 0.00 0.00 0.00 2.83
516 517 5.710099 TCCTTTCCGCTTTATTTCAGATGTT 59.290 36.000 0.00 0.00 0.00 2.71
517 518 5.253330 TCCTTTCCGCTTTATTTCAGATGT 58.747 37.500 0.00 0.00 0.00 3.06
518 519 5.586243 TCTCCTTTCCGCTTTATTTCAGATG 59.414 40.000 0.00 0.00 0.00 2.90
519 520 5.745227 TCTCCTTTCCGCTTTATTTCAGAT 58.255 37.500 0.00 0.00 0.00 2.90
520 521 5.160607 TCTCCTTTCCGCTTTATTTCAGA 57.839 39.130 0.00 0.00 0.00 3.27
521 522 4.333926 CCTCTCCTTTCCGCTTTATTTCAG 59.666 45.833 0.00 0.00 0.00 3.02
522 523 4.019681 TCCTCTCCTTTCCGCTTTATTTCA 60.020 41.667 0.00 0.00 0.00 2.69
523 524 4.333095 GTCCTCTCCTTTCCGCTTTATTTC 59.667 45.833 0.00 0.00 0.00 2.17
524 525 4.262617 GTCCTCTCCTTTCCGCTTTATTT 58.737 43.478 0.00 0.00 0.00 1.40
525 526 3.263425 TGTCCTCTCCTTTCCGCTTTATT 59.737 43.478 0.00 0.00 0.00 1.40
526 527 2.838202 TGTCCTCTCCTTTCCGCTTTAT 59.162 45.455 0.00 0.00 0.00 1.40
527 528 2.253610 TGTCCTCTCCTTTCCGCTTTA 58.746 47.619 0.00 0.00 0.00 1.85
528 529 1.056660 TGTCCTCTCCTTTCCGCTTT 58.943 50.000 0.00 0.00 0.00 3.51
529 530 1.280457 ATGTCCTCTCCTTTCCGCTT 58.720 50.000 0.00 0.00 0.00 4.68
530 531 1.280457 AATGTCCTCTCCTTTCCGCT 58.720 50.000 0.00 0.00 0.00 5.52
531 532 2.115343 AAATGTCCTCTCCTTTCCGC 57.885 50.000 0.00 0.00 0.00 5.54
552 553 7.335924 GCCATAGGTTAGTGACTACATGAAAAA 59.664 37.037 0.00 0.00 0.00 1.94
553 554 6.821665 GCCATAGGTTAGTGACTACATGAAAA 59.178 38.462 0.00 0.00 0.00 2.29
554 555 6.346096 GCCATAGGTTAGTGACTACATGAAA 58.654 40.000 0.00 0.00 0.00 2.69
555 556 5.163343 GGCCATAGGTTAGTGACTACATGAA 60.163 44.000 0.00 0.00 0.00 2.57
556 557 4.344102 GGCCATAGGTTAGTGACTACATGA 59.656 45.833 0.00 0.00 0.00 3.07
557 558 4.345257 AGGCCATAGGTTAGTGACTACATG 59.655 45.833 5.01 0.00 0.00 3.21
558 559 4.557705 AGGCCATAGGTTAGTGACTACAT 58.442 43.478 5.01 0.00 0.00 2.29
559 560 3.990369 AGGCCATAGGTTAGTGACTACA 58.010 45.455 5.01 0.00 0.00 2.74
560 561 5.047235 CCATAGGCCATAGGTTAGTGACTAC 60.047 48.000 5.01 0.00 0.00 2.73
561 562 5.084519 CCATAGGCCATAGGTTAGTGACTA 58.915 45.833 5.01 0.00 0.00 2.59
562 563 3.904339 CCATAGGCCATAGGTTAGTGACT 59.096 47.826 5.01 0.00 0.00 3.41
563 564 3.646637 ACCATAGGCCATAGGTTAGTGAC 59.353 47.826 5.01 0.00 0.00 3.67
564 565 3.936461 ACCATAGGCCATAGGTTAGTGA 58.064 45.455 5.01 0.00 0.00 3.41
565 566 4.505039 GGAACCATAGGCCATAGGTTAGTG 60.505 50.000 21.21 0.81 43.94 2.74
566 567 3.651423 GGAACCATAGGCCATAGGTTAGT 59.349 47.826 21.21 4.67 43.94 2.24
567 568 4.287766 GGAACCATAGGCCATAGGTTAG 57.712 50.000 21.21 0.00 43.94 2.34
612 613 5.366477 ACCATCAATTTTTAAGGCCCATAGG 59.634 40.000 0.00 0.00 0.00 2.57
613 614 6.462909 GGACCATCAATTTTTAAGGCCCATAG 60.463 42.308 0.00 0.00 0.00 2.23
614 615 5.365314 GGACCATCAATTTTTAAGGCCCATA 59.635 40.000 0.00 0.00 0.00 2.74
615 616 4.164030 GGACCATCAATTTTTAAGGCCCAT 59.836 41.667 0.00 0.00 0.00 4.00
616 617 3.517500 GGACCATCAATTTTTAAGGCCCA 59.482 43.478 0.00 0.00 0.00 5.36
617 618 3.517500 TGGACCATCAATTTTTAAGGCCC 59.482 43.478 0.00 0.00 0.00 5.80
618 619 4.222810 AGTGGACCATCAATTTTTAAGGCC 59.777 41.667 0.00 0.00 0.00 5.19
619 620 5.405935 AGTGGACCATCAATTTTTAAGGC 57.594 39.130 0.00 0.00 0.00 4.35
620 621 7.812669 GTGTTAGTGGACCATCAATTTTTAAGG 59.187 37.037 0.00 0.00 0.00 2.69
621 622 7.812669 GGTGTTAGTGGACCATCAATTTTTAAG 59.187 37.037 0.00 0.00 31.97 1.85
622 623 7.287927 TGGTGTTAGTGGACCATCAATTTTTAA 59.712 33.333 0.00 0.00 37.32 1.52
623 624 6.778069 TGGTGTTAGTGGACCATCAATTTTTA 59.222 34.615 0.00 0.00 37.32 1.52
624 625 5.600484 TGGTGTTAGTGGACCATCAATTTTT 59.400 36.000 0.00 0.00 37.32 1.94
625 626 5.144100 TGGTGTTAGTGGACCATCAATTTT 58.856 37.500 0.00 0.00 37.32 1.82
626 627 4.735369 TGGTGTTAGTGGACCATCAATTT 58.265 39.130 0.00 0.00 37.32 1.82
627 628 4.042809 TCTGGTGTTAGTGGACCATCAATT 59.957 41.667 0.00 0.00 41.47 2.32
628 629 3.587061 TCTGGTGTTAGTGGACCATCAAT 59.413 43.478 0.00 0.00 41.47 2.57
629 630 2.976185 TCTGGTGTTAGTGGACCATCAA 59.024 45.455 0.00 0.00 41.47 2.57
630 631 2.615391 TCTGGTGTTAGTGGACCATCA 58.385 47.619 0.00 0.00 41.47 3.07
631 632 3.914426 ATCTGGTGTTAGTGGACCATC 57.086 47.619 0.00 0.00 41.47 3.51
632 633 3.873801 GCAATCTGGTGTTAGTGGACCAT 60.874 47.826 0.00 0.00 41.47 3.55
633 634 2.552155 GCAATCTGGTGTTAGTGGACCA 60.552 50.000 0.00 0.00 40.04 4.02
634 635 2.084546 GCAATCTGGTGTTAGTGGACC 58.915 52.381 0.00 0.00 0.00 4.46
635 636 3.059352 AGCAATCTGGTGTTAGTGGAC 57.941 47.619 0.00 0.00 0.00 4.02
636 637 3.788227 AAGCAATCTGGTGTTAGTGGA 57.212 42.857 0.00 0.00 0.00 4.02
637 638 3.820467 TCAAAGCAATCTGGTGTTAGTGG 59.180 43.478 0.00 0.00 0.00 4.00
638 639 5.633830 ATCAAAGCAATCTGGTGTTAGTG 57.366 39.130 0.00 0.00 0.00 2.74
639 640 4.393062 CGATCAAAGCAATCTGGTGTTAGT 59.607 41.667 0.00 0.00 0.00 2.24
640 641 4.201851 CCGATCAAAGCAATCTGGTGTTAG 60.202 45.833 0.00 0.00 0.00 2.34
641 642 3.689161 CCGATCAAAGCAATCTGGTGTTA 59.311 43.478 0.00 0.00 0.00 2.41
642 643 2.489329 CCGATCAAAGCAATCTGGTGTT 59.511 45.455 0.00 0.00 0.00 3.32
643 644 2.086869 CCGATCAAAGCAATCTGGTGT 58.913 47.619 0.00 0.00 0.00 4.16
644 645 1.402968 CCCGATCAAAGCAATCTGGTG 59.597 52.381 0.00 0.00 0.00 4.17
645 646 1.004745 ACCCGATCAAAGCAATCTGGT 59.995 47.619 0.00 0.00 36.32 4.00
646 647 1.402968 CACCCGATCAAAGCAATCTGG 59.597 52.381 0.00 0.00 34.65 3.86
647 648 1.202222 GCACCCGATCAAAGCAATCTG 60.202 52.381 0.00 0.00 0.00 2.90
648 649 1.098050 GCACCCGATCAAAGCAATCT 58.902 50.000 0.00 0.00 0.00 2.40
649 650 0.248215 CGCACCCGATCAAAGCAATC 60.248 55.000 0.00 0.00 36.29 2.67
650 651 0.960364 ACGCACCCGATCAAAGCAAT 60.960 50.000 0.00 0.00 38.29 3.56
651 652 1.573829 GACGCACCCGATCAAAGCAA 61.574 55.000 0.00 0.00 38.29 3.91
652 653 2.031919 ACGCACCCGATCAAAGCA 59.968 55.556 0.00 0.00 38.29 3.91
653 654 1.298859 AAGACGCACCCGATCAAAGC 61.299 55.000 0.00 0.00 38.29 3.51
654 655 0.721718 GAAGACGCACCCGATCAAAG 59.278 55.000 0.00 0.00 38.29 2.77
655 656 0.672401 GGAAGACGCACCCGATCAAA 60.672 55.000 0.00 0.00 38.29 2.69
656 657 1.079405 GGAAGACGCACCCGATCAA 60.079 57.895 0.00 0.00 38.29 2.57
657 658 2.577059 GGAAGACGCACCCGATCA 59.423 61.111 0.00 0.00 38.29 2.92
658 659 2.202892 GGGAAGACGCACCCGATC 60.203 66.667 0.00 0.00 36.56 3.69
659 660 3.782443 GGGGAAGACGCACCCGAT 61.782 66.667 0.00 0.00 46.42 4.18
662 663 4.097361 GGAGGGGAAGACGCACCC 62.097 72.222 0.00 0.00 45.06 4.61
663 664 3.003763 AGGAGGGGAAGACGCACC 61.004 66.667 0.00 0.00 41.98 5.01
664 665 2.579738 GAGGAGGGGAAGACGCAC 59.420 66.667 0.00 0.00 33.80 5.34
665 666 3.068691 CGAGGAGGGGAAGACGCA 61.069 66.667 0.00 0.00 33.80 5.24
666 667 4.516195 GCGAGGAGGGGAAGACGC 62.516 72.222 0.00 0.00 39.33 5.19
667 668 3.839432 GGCGAGGAGGGGAAGACG 61.839 72.222 0.00 0.00 0.00 4.18
668 669 3.471806 GGGCGAGGAGGGGAAGAC 61.472 72.222 0.00 0.00 0.00 3.01
669 670 3.680920 GAGGGCGAGGAGGGGAAGA 62.681 68.421 0.00 0.00 0.00 2.87
670 671 3.157949 GAGGGCGAGGAGGGGAAG 61.158 72.222 0.00 0.00 0.00 3.46
684 685 2.441822 GAATCGATGAGGGGCCGAGG 62.442 65.000 0.00 0.00 35.70 4.63
689 690 2.432123 GGGGAATCGATGAGGGGC 59.568 66.667 0.00 0.00 0.00 5.80
697 698 2.238847 CTTGCGGAGTGGGGAATCGA 62.239 60.000 0.00 0.00 0.00 3.59
701 702 0.035439 GATTCTTGCGGAGTGGGGAA 60.035 55.000 0.00 0.00 0.00 3.97
738 739 7.362662 ACCAATATGCATTGTCGATTTGTATC 58.637 34.615 3.54 0.00 40.04 2.24
740 741 6.691754 ACCAATATGCATTGTCGATTTGTA 57.308 33.333 3.54 0.00 40.04 2.41
867 869 2.738521 GAGCAAGAACAGCCGCGA 60.739 61.111 8.23 0.00 0.00 5.87
868 870 3.793144 GGAGCAAGAACAGCCGCG 61.793 66.667 0.00 0.00 0.00 6.46
874 876 4.681421 CTCGCTGGAGCAAGAACA 57.319 55.556 0.00 0.00 42.21 3.18
940 942 1.416401 ACCGCGTGGGAATCAGATAAT 59.584 47.619 21.14 0.00 40.75 1.28
941 943 0.828022 ACCGCGTGGGAATCAGATAA 59.172 50.000 21.14 0.00 40.75 1.75
943 945 1.153369 CACCGCGTGGGAATCAGAT 60.153 57.895 21.14 0.00 40.75 2.90
1218 3375 2.014554 GAAGCGCTCGACGTTGTCA 61.015 57.895 12.06 0.00 46.11 3.58
1348 3584 2.838637 TCCTCCTCTTCCTCCTCTTC 57.161 55.000 0.00 0.00 0.00 2.87
1349 3585 2.657459 TCTTCCTCCTCTTCCTCCTCTT 59.343 50.000 0.00 0.00 0.00 2.85
1350 3586 2.244769 CTCTTCCTCCTCTTCCTCCTCT 59.755 54.545 0.00 0.00 0.00 3.69
1351 3587 2.243736 TCTCTTCCTCCTCTTCCTCCTC 59.756 54.545 0.00 0.00 0.00 3.71
1352 3588 2.293246 TCTCTTCCTCCTCTTCCTCCT 58.707 52.381 0.00 0.00 0.00 3.69
1353 3589 2.838637 TCTCTTCCTCCTCTTCCTCC 57.161 55.000 0.00 0.00 0.00 4.30
1354 3590 3.031013 CCTTCTCTTCCTCCTCTTCCTC 58.969 54.545 0.00 0.00 0.00 3.71
1355 3591 2.657459 TCCTTCTCTTCCTCCTCTTCCT 59.343 50.000 0.00 0.00 0.00 3.36
1356 3592 3.108847 TCCTTCTCTTCCTCCTCTTCC 57.891 52.381 0.00 0.00 0.00 3.46
1357 3593 4.349365 TCTTCCTTCTCTTCCTCCTCTTC 58.651 47.826 0.00 0.00 0.00 2.87
1358 3594 4.045334 TCTCTTCCTTCTCTTCCTCCTCTT 59.955 45.833 0.00 0.00 0.00 2.85
1359 3595 3.596046 TCTCTTCCTTCTCTTCCTCCTCT 59.404 47.826 0.00 0.00 0.00 3.69
1360 3596 3.976015 TCTCTTCCTTCTCTTCCTCCTC 58.024 50.000 0.00 0.00 0.00 3.71
1361 3597 4.352893 CTTCTCTTCCTTCTCTTCCTCCT 58.647 47.826 0.00 0.00 0.00 3.69
1362 3598 3.450817 CCTTCTCTTCCTTCTCTTCCTCC 59.549 52.174 0.00 0.00 0.00 4.30
1363 3599 4.349365 TCCTTCTCTTCCTTCTCTTCCTC 58.651 47.826 0.00 0.00 0.00 3.71
1368 3604 3.440127 CACCTCCTTCTCTTCCTTCTCT 58.560 50.000 0.00 0.00 0.00 3.10
1372 3608 2.545810 CTCCACCTCCTTCTCTTCCTT 58.454 52.381 0.00 0.00 0.00 3.36
1425 3724 2.997897 GTCCGGCTCCCAGACACT 60.998 66.667 0.00 0.00 0.00 3.55
1510 3822 2.672996 GTGGTTGCAGCCATCCGT 60.673 61.111 26.00 0.00 41.08 4.69
1818 4697 0.613777 GGAGAGGGTTCCACGTCAAT 59.386 55.000 0.00 0.00 37.20 2.57
1931 4816 5.485353 TCTCTAACCTGAATCCATGACACTT 59.515 40.000 0.00 0.00 0.00 3.16
1950 4835 5.087323 AGTGTCTTGAGGTCCATTTCTCTA 58.913 41.667 0.00 0.00 0.00 2.43
1982 4867 1.077429 GAGGTCCTGGGATTGCCAC 60.077 63.158 0.00 0.00 35.15 5.01
2232 5143 4.556233 TGTTGGTGAATAGAAGACGTCAG 58.444 43.478 19.50 0.00 0.00 3.51
2236 5147 7.539712 AACATATGTTGGTGAATAGAAGACG 57.460 36.000 20.19 0.00 36.80 4.18
2262 5176 7.066781 ACTTCAGGATTTTCTTAAGGGAAACA 58.933 34.615 1.85 0.00 35.31 2.83
2416 5336 3.488553 GCGTTGTTAAAGGAAACAGCTGT 60.489 43.478 15.25 15.25 40.29 4.40
2426 5346 3.529634 TGAATGACGCGTTGTTAAAGG 57.470 42.857 15.53 0.00 0.00 3.11
2551 5471 3.622206 GCCACATCCACCAGTGATCTTTA 60.622 47.826 0.00 0.00 37.97 1.85
2552 5472 2.881403 GCCACATCCACCAGTGATCTTT 60.881 50.000 0.00 0.00 37.97 2.52
2553 5473 1.340405 GCCACATCCACCAGTGATCTT 60.340 52.381 0.00 0.00 37.97 2.40
2575 5501 0.527565 GGCTGGCACGTGATTCAAAT 59.472 50.000 22.23 0.00 0.00 2.32
2663 5599 2.233676 CCACAGCTACGATGCCCATATA 59.766 50.000 0.00 0.00 0.00 0.86
2671 5607 7.534085 TTAAAAAGATACCACAGCTACGATG 57.466 36.000 0.00 0.00 0.00 3.84
2672 5608 6.258068 GCTTAAAAAGATACCACAGCTACGAT 59.742 38.462 0.00 0.00 0.00 3.73
2716 5652 3.766691 CCATGCTGGTTGCTGGGC 61.767 66.667 0.00 0.00 43.37 5.36
2717 5653 1.380785 ATCCATGCTGGTTGCTGGG 60.381 57.895 2.68 0.00 43.37 4.45
2748 5685 3.735237 ACAGTCTGGTAAGTCACACAG 57.265 47.619 4.53 0.00 0.00 3.66
2760 5697 2.808543 GGTTGCTGAAAGTACAGTCTGG 59.191 50.000 4.53 0.00 39.73 3.86
2908 6307 4.093408 GCAAAATCGAACTAGCATCAGTGA 59.907 41.667 0.00 0.00 0.00 3.41
2910 6309 3.062639 CGCAAAATCGAACTAGCATCAGT 59.937 43.478 0.00 0.00 0.00 3.41
2932 7873 7.625828 AACTGTAGCATAGTTTATGTTTCCC 57.374 36.000 0.00 0.00 34.91 3.97
3008 8045 8.682710 GCAGGGACATCAAAATAGTAATGTAAA 58.317 33.333 0.00 0.00 32.70 2.01
3012 8049 6.698008 TGCAGGGACATCAAAATAGTAATG 57.302 37.500 0.00 0.00 0.00 1.90
3076 8353 3.592059 TGTGTCTGGGCTACGAAATTAC 58.408 45.455 0.00 0.00 0.00 1.89
3117 8394 2.061028 CCGGAAATGCTGCAGTTTTTC 58.939 47.619 23.96 23.96 0.00 2.29
3148 8426 3.134804 GGTGTACAGGCTCTTGTATGGAT 59.865 47.826 0.00 0.00 36.08 3.41
3195 8475 2.490509 ACACATTGACGACACTCCGATA 59.509 45.455 0.00 0.00 0.00 2.92
3272 8562 6.868339 CCCAGGATGTGATTTGTTTAGTTTTC 59.132 38.462 0.00 0.00 0.00 2.29
3277 8567 5.256474 AGACCCAGGATGTGATTTGTTTAG 58.744 41.667 0.00 0.00 0.00 1.85
3329 8619 4.992951 TGTTTAGATGATCATGATGAGGCG 59.007 41.667 14.30 0.00 0.00 5.52
3391 8683 1.375652 CAGGCACCACTGAGCAGAG 60.376 63.158 4.21 0.00 40.97 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.