Multiple sequence alignment - TraesCS7B01G043400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G043400 | chr7B | 100.000 | 6199 | 0 | 0 | 1 | 6199 | 43243954 | 43250152 | 0.000000e+00 | 11448.0 |
1 | TraesCS7B01G043400 | chr7B | 100.000 | 581 | 0 | 0 | 6512 | 7092 | 43250465 | 43251045 | 0.000000e+00 | 1074.0 |
2 | TraesCS7B01G043400 | chr7B | 91.289 | 574 | 49 | 1 | 6519 | 7092 | 678292486 | 678293058 | 0.000000e+00 | 782.0 |
3 | TraesCS7B01G043400 | chr7B | 90.206 | 582 | 55 | 2 | 6512 | 7092 | 670238783 | 670239363 | 0.000000e+00 | 758.0 |
4 | TraesCS7B01G043400 | chr7B | 88.462 | 234 | 24 | 2 | 2479 | 2711 | 134555717 | 134555486 | 5.420000e-71 | 279.0 |
5 | TraesCS7B01G043400 | chr7B | 85.882 | 85 | 12 | 0 | 511 | 595 | 702229462 | 702229378 | 2.720000e-14 | 91.6 |
6 | TraesCS7B01G043400 | chr7D | 94.876 | 1093 | 56 | 0 | 5107 | 6199 | 91679600 | 91678508 | 0.000000e+00 | 1709.0 |
7 | TraesCS7B01G043400 | chr7D | 88.285 | 939 | 76 | 11 | 2036 | 2949 | 91689348 | 91688419 | 0.000000e+00 | 1094.0 |
8 | TraesCS7B01G043400 | chr7D | 89.431 | 738 | 60 | 10 | 1325 | 2044 | 91690050 | 91689313 | 0.000000e+00 | 915.0 |
9 | TraesCS7B01G043400 | chr7D | 91.082 | 684 | 35 | 5 | 594 | 1273 | 91690712 | 91690051 | 0.000000e+00 | 902.0 |
10 | TraesCS7B01G043400 | chr7D | 87.644 | 696 | 63 | 12 | 1370 | 2044 | 98997895 | 98997202 | 0.000000e+00 | 787.0 |
11 | TraesCS7B01G043400 | chr7D | 87.834 | 674 | 47 | 16 | 4340 | 4979 | 91681111 | 91680439 | 0.000000e+00 | 758.0 |
12 | TraesCS7B01G043400 | chr7D | 93.569 | 311 | 18 | 1 | 3485 | 3795 | 91687822 | 91687514 | 5.010000e-126 | 462.0 |
13 | TraesCS7B01G043400 | chr7D | 95.769 | 260 | 11 | 0 | 3789 | 4048 | 91681365 | 91681106 | 3.060000e-113 | 420.0 |
14 | TraesCS7B01G043400 | chr7D | 90.455 | 220 | 14 | 5 | 2949 | 3165 | 91688381 | 91688166 | 4.190000e-72 | 283.0 |
15 | TraesCS7B01G043400 | chr7D | 87.705 | 244 | 24 | 5 | 2479 | 2718 | 169383755 | 169383514 | 5.420000e-71 | 279.0 |
16 | TraesCS7B01G043400 | chr7D | 88.626 | 211 | 21 | 3 | 4048 | 4257 | 113371291 | 113371083 | 3.280000e-63 | 254.0 |
17 | TraesCS7B01G043400 | chr7D | 88.263 | 213 | 21 | 4 | 4049 | 4257 | 237412849 | 237412637 | 1.180000e-62 | 252.0 |
18 | TraesCS7B01G043400 | chr7D | 82.645 | 242 | 29 | 8 | 2486 | 2718 | 638149629 | 638149392 | 1.210000e-47 | 202.0 |
19 | TraesCS7B01G043400 | chr7A | 93.824 | 1101 | 62 | 3 | 5099 | 6196 | 93252382 | 93251285 | 0.000000e+00 | 1652.0 |
20 | TraesCS7B01G043400 | chr7A | 89.328 | 937 | 77 | 5 | 2036 | 2949 | 93256063 | 93255127 | 0.000000e+00 | 1155.0 |
21 | TraesCS7B01G043400 | chr7A | 92.581 | 647 | 40 | 3 | 2949 | 3595 | 93255089 | 93254451 | 0.000000e+00 | 922.0 |
22 | TraesCS7B01G043400 | chr7A | 87.805 | 738 | 63 | 9 | 1331 | 2044 | 93256762 | 93256028 | 0.000000e+00 | 839.0 |
23 | TraesCS7B01G043400 | chr7A | 94.769 | 325 | 14 | 2 | 3584 | 3906 | 93253163 | 93252840 | 2.950000e-138 | 503.0 |
24 | TraesCS7B01G043400 | chr7A | 80.914 | 613 | 84 | 24 | 1 | 592 | 625523192 | 625523792 | 3.020000e-123 | 453.0 |
25 | TraesCS7B01G043400 | chr7A | 89.892 | 277 | 24 | 4 | 4773 | 5047 | 93252666 | 93252392 | 3.150000e-93 | 353.0 |
26 | TraesCS7B01G043400 | chr7A | 89.003 | 291 | 17 | 6 | 922 | 1212 | 93257141 | 93256866 | 5.270000e-91 | 346.0 |
27 | TraesCS7B01G043400 | chr7A | 88.000 | 275 | 22 | 5 | 595 | 867 | 93257547 | 93257282 | 1.490000e-81 | 315.0 |
28 | TraesCS7B01G043400 | chr7A | 87.850 | 214 | 24 | 1 | 4045 | 4256 | 691632759 | 691632546 | 4.250000e-62 | 250.0 |
29 | TraesCS7B01G043400 | chr7A | 86.099 | 223 | 25 | 4 | 2488 | 2706 | 171382161 | 171381941 | 1.190000e-57 | 235.0 |
30 | TraesCS7B01G043400 | chr7A | 93.396 | 106 | 7 | 0 | 4670 | 4775 | 93252825 | 93252720 | 2.650000e-34 | 158.0 |
31 | TraesCS7B01G043400 | chr7A | 93.443 | 61 | 2 | 2 | 1370 | 1428 | 144608517 | 144608457 | 9.800000e-14 | 89.8 |
32 | TraesCS7B01G043400 | chr7A | 93.023 | 43 | 3 | 0 | 1275 | 1317 | 540900343 | 540900385 | 5.940000e-06 | 63.9 |
33 | TraesCS7B01G043400 | chr7A | 97.059 | 34 | 1 | 0 | 839 | 872 | 93257249 | 93257282 | 2.760000e-04 | 58.4 |
34 | TraesCS7B01G043400 | chr2D | 86.223 | 1263 | 138 | 19 | 4962 | 6193 | 346576115 | 346577372 | 0.000000e+00 | 1336.0 |
35 | TraesCS7B01G043400 | chr2D | 85.764 | 857 | 88 | 9 | 1451 | 2304 | 119841175 | 119842000 | 0.000000e+00 | 876.0 |
36 | TraesCS7B01G043400 | chr2D | 87.216 | 485 | 52 | 3 | 3572 | 4048 | 346575570 | 346576052 | 1.740000e-150 | 544.0 |
37 | TraesCS7B01G043400 | chr2D | 86.316 | 380 | 38 | 8 | 1 | 380 | 482410416 | 482410781 | 1.110000e-107 | 401.0 |
38 | TraesCS7B01G043400 | chr2D | 91.045 | 67 | 6 | 0 | 1378 | 1444 | 119841077 | 119841143 | 2.720000e-14 | 91.6 |
39 | TraesCS7B01G043400 | chr2D | 91.935 | 62 | 5 | 0 | 1369 | 1430 | 118029465 | 118029526 | 3.520000e-13 | 87.9 |
40 | TraesCS7B01G043400 | chr2A | 88.493 | 1095 | 112 | 9 | 5107 | 6193 | 460901098 | 460902186 | 0.000000e+00 | 1312.0 |
41 | TraesCS7B01G043400 | chr2A | 85.625 | 480 | 57 | 8 | 3575 | 4045 | 460900440 | 460900916 | 1.780000e-135 | 494.0 |
42 | TraesCS7B01G043400 | chr2A | 80.131 | 609 | 94 | 23 | 1 | 592 | 722211658 | 722211060 | 5.080000e-116 | 429.0 |
43 | TraesCS7B01G043400 | chr2A | 88.626 | 211 | 20 | 3 | 4049 | 4256 | 716504304 | 716504095 | 3.280000e-63 | 254.0 |
44 | TraesCS7B01G043400 | chr2B | 88.305 | 1103 | 108 | 11 | 5107 | 6193 | 412401072 | 412402169 | 0.000000e+00 | 1303.0 |
45 | TraesCS7B01G043400 | chr2B | 93.264 | 579 | 38 | 1 | 6515 | 7092 | 9036564 | 9037142 | 0.000000e+00 | 852.0 |
46 | TraesCS7B01G043400 | chr2B | 90.969 | 609 | 40 | 10 | 1 | 596 | 669434913 | 669435519 | 0.000000e+00 | 806.0 |
47 | TraesCS7B01G043400 | chr2B | 91.638 | 574 | 48 | 0 | 6518 | 7091 | 26723140 | 26722567 | 0.000000e+00 | 795.0 |
48 | TraesCS7B01G043400 | chr2B | 84.679 | 483 | 55 | 3 | 3571 | 4045 | 412400415 | 412400886 | 1.390000e-126 | 464.0 |
49 | TraesCS7B01G043400 | chr2B | 79.520 | 625 | 80 | 35 | 1 | 601 | 81537654 | 81538254 | 1.110000e-107 | 401.0 |
50 | TraesCS7B01G043400 | chr2B | 89.573 | 211 | 20 | 1 | 4049 | 4257 | 221723769 | 221723559 | 4.220000e-67 | 267.0 |
51 | TraesCS7B01G043400 | chr2B | 87.671 | 73 | 3 | 3 | 4344 | 4410 | 412400895 | 412400967 | 5.900000e-11 | 80.5 |
52 | TraesCS7B01G043400 | chr2B | 89.091 | 55 | 4 | 2 | 3140 | 3192 | 647894655 | 647894601 | 4.590000e-07 | 67.6 |
53 | TraesCS7B01G043400 | chr6A | 98.495 | 598 | 9 | 0 | 1 | 598 | 483565913 | 483566510 | 0.000000e+00 | 1055.0 |
54 | TraesCS7B01G043400 | chr6A | 83.482 | 1120 | 142 | 19 | 1377 | 2484 | 394638254 | 394639342 | 0.000000e+00 | 1003.0 |
55 | TraesCS7B01G043400 | chr6A | 87.395 | 357 | 36 | 5 | 1 | 357 | 558579901 | 558579554 | 1.110000e-107 | 401.0 |
56 | TraesCS7B01G043400 | chr6A | 91.613 | 155 | 11 | 2 | 3334 | 3488 | 610234150 | 610234302 | 5.570000e-51 | 213.0 |
57 | TraesCS7B01G043400 | chr6A | 91.613 | 155 | 11 | 2 | 3334 | 3488 | 613273264 | 613273416 | 5.570000e-51 | 213.0 |
58 | TraesCS7B01G043400 | chr6A | 85.882 | 85 | 12 | 0 | 510 | 594 | 115789704 | 115789620 | 2.720000e-14 | 91.6 |
59 | TraesCS7B01G043400 | chr6A | 97.500 | 40 | 1 | 0 | 1278 | 1317 | 547593822 | 547593861 | 1.280000e-07 | 69.4 |
60 | TraesCS7B01G043400 | chr6A | 93.182 | 44 | 2 | 1 | 1284 | 1326 | 141847384 | 141847427 | 5.940000e-06 | 63.9 |
61 | TraesCS7B01G043400 | chr6A | 95.000 | 40 | 2 | 0 | 1278 | 1317 | 441300579 | 441300540 | 5.940000e-06 | 63.9 |
62 | TraesCS7B01G043400 | chr6B | 97.347 | 603 | 16 | 0 | 1 | 603 | 72343277 | 72342675 | 0.000000e+00 | 1026.0 |
63 | TraesCS7B01G043400 | chr3A | 83.126 | 1126 | 146 | 20 | 1370 | 2483 | 224963146 | 224964239 | 0.000000e+00 | 987.0 |
64 | TraesCS7B01G043400 | chr3A | 89.983 | 579 | 57 | 1 | 6515 | 7092 | 743124555 | 743123977 | 0.000000e+00 | 747.0 |
65 | TraesCS7B01G043400 | chr3A | 89.151 | 212 | 20 | 2 | 4049 | 4257 | 117484209 | 117483998 | 1.960000e-65 | 261.0 |
66 | TraesCS7B01G043400 | chr3A | 91.139 | 158 | 12 | 2 | 3331 | 3488 | 10990191 | 10990346 | 5.570000e-51 | 213.0 |
67 | TraesCS7B01G043400 | chr3A | 91.026 | 156 | 12 | 2 | 3333 | 3488 | 113357800 | 113357953 | 7.210000e-50 | 209.0 |
68 | TraesCS7B01G043400 | chr3A | 95.000 | 40 | 2 | 0 | 1278 | 1317 | 666224519 | 666224480 | 5.940000e-06 | 63.9 |
69 | TraesCS7B01G043400 | chr4A | 83.560 | 1028 | 126 | 21 | 1370 | 2385 | 574771659 | 574770663 | 0.000000e+00 | 922.0 |
70 | TraesCS7B01G043400 | chr4A | 87.081 | 627 | 62 | 9 | 1370 | 1977 | 620474641 | 620475267 | 0.000000e+00 | 691.0 |
71 | TraesCS7B01G043400 | chr4A | 87.783 | 442 | 52 | 2 | 2036 | 2477 | 620475281 | 620475720 | 3.790000e-142 | 516.0 |
72 | TraesCS7B01G043400 | chr4A | 89.100 | 211 | 21 | 1 | 4049 | 4257 | 649016679 | 649016469 | 1.960000e-65 | 261.0 |
73 | TraesCS7B01G043400 | chr4A | 90.506 | 158 | 13 | 2 | 3331 | 3488 | 540055086 | 540055241 | 2.590000e-49 | 207.0 |
74 | TraesCS7B01G043400 | chr4A | 97.500 | 40 | 1 | 0 | 1278 | 1317 | 584810911 | 584810872 | 1.280000e-07 | 69.4 |
75 | TraesCS7B01G043400 | chr1B | 93.253 | 578 | 39 | 0 | 6515 | 7092 | 41365508 | 41364931 | 0.000000e+00 | 852.0 |
76 | TraesCS7B01G043400 | chr1B | 85.882 | 85 | 12 | 0 | 511 | 595 | 632945006 | 632944922 | 2.720000e-14 | 91.6 |
77 | TraesCS7B01G043400 | chr3B | 92.388 | 578 | 44 | 0 | 6515 | 7092 | 753181250 | 753180673 | 0.000000e+00 | 824.0 |
78 | TraesCS7B01G043400 | chr3B | 90.435 | 575 | 53 | 2 | 6518 | 7092 | 173364455 | 173363883 | 0.000000e+00 | 756.0 |
79 | TraesCS7B01G043400 | chr3B | 88.263 | 213 | 22 | 2 | 4047 | 4257 | 817426071 | 817426282 | 1.180000e-62 | 252.0 |
80 | TraesCS7B01G043400 | chr5A | 85.473 | 771 | 66 | 20 | 4340 | 5065 | 9595210 | 9594441 | 0.000000e+00 | 761.0 |
81 | TraesCS7B01G043400 | chr5A | 90.909 | 506 | 43 | 1 | 5308 | 5813 | 9593706 | 9593204 | 0.000000e+00 | 676.0 |
82 | TraesCS7B01G043400 | chr5A | 91.837 | 392 | 25 | 2 | 5815 | 6199 | 9590241 | 9589850 | 2.250000e-149 | 540.0 |
83 | TraesCS7B01G043400 | chr5A | 91.077 | 325 | 26 | 1 | 3727 | 4048 | 9595529 | 9595205 | 3.040000e-118 | 436.0 |
84 | TraesCS7B01G043400 | chr5A | 83.063 | 431 | 31 | 15 | 822 | 1225 | 9596773 | 9596358 | 3.150000e-93 | 353.0 |
85 | TraesCS7B01G043400 | chr5A | 91.150 | 226 | 17 | 2 | 5099 | 5321 | 9594441 | 9594216 | 3.210000e-78 | 303.0 |
86 | TraesCS7B01G043400 | chr5A | 90.968 | 155 | 12 | 2 | 3334 | 3488 | 488019101 | 488019253 | 2.590000e-49 | 207.0 |
87 | TraesCS7B01G043400 | chr5A | 90.968 | 155 | 12 | 2 | 3334 | 3488 | 566033422 | 566033574 | 2.590000e-49 | 207.0 |
88 | TraesCS7B01G043400 | chr5A | 85.882 | 85 | 12 | 0 | 511 | 595 | 683345327 | 683345243 | 2.720000e-14 | 91.6 |
89 | TraesCS7B01G043400 | chr5D | 85.541 | 740 | 88 | 8 | 5377 | 6100 | 543586797 | 543586061 | 0.000000e+00 | 756.0 |
90 | TraesCS7B01G043400 | chr5D | 92.308 | 156 | 12 | 0 | 3822 | 3977 | 543587234 | 543587079 | 9.260000e-54 | 222.0 |
91 | TraesCS7B01G043400 | chr5D | 75.262 | 477 | 104 | 12 | 1370 | 1834 | 51229491 | 51229965 | 1.550000e-51 | 215.0 |
92 | TraesCS7B01G043400 | chr5D | 75.105 | 478 | 103 | 13 | 1370 | 1834 | 51305878 | 51306352 | 7.210000e-50 | 209.0 |
93 | TraesCS7B01G043400 | chr5D | 75.500 | 400 | 62 | 25 | 224 | 595 | 330403918 | 330403527 | 5.690000e-36 | 163.0 |
94 | TraesCS7B01G043400 | chrUn | 89.157 | 581 | 62 | 1 | 6512 | 7092 | 42167756 | 42168335 | 0.000000e+00 | 723.0 |
95 | TraesCS7B01G043400 | chrUn | 79.661 | 177 | 26 | 8 | 423 | 593 | 388296687 | 388296859 | 1.250000e-22 | 119.0 |
96 | TraesCS7B01G043400 | chrUn | 97.500 | 40 | 1 | 0 | 1278 | 1317 | 22143205 | 22143166 | 1.280000e-07 | 69.4 |
97 | TraesCS7B01G043400 | chr4B | 85.204 | 588 | 81 | 6 | 1461 | 2044 | 377950854 | 377950269 | 3.660000e-167 | 599.0 |
98 | TraesCS7B01G043400 | chr4B | 77.407 | 540 | 109 | 9 | 1371 | 1897 | 6640689 | 6640150 | 6.910000e-80 | 309.0 |
99 | TraesCS7B01G043400 | chr4B | 89.302 | 215 | 21 | 2 | 4045 | 4257 | 66802665 | 66802879 | 1.170000e-67 | 268.0 |
100 | TraesCS7B01G043400 | chr4B | 92.958 | 71 | 4 | 1 | 1370 | 1440 | 377950975 | 377950906 | 1.260000e-17 | 102.0 |
101 | TraesCS7B01G043400 | chr4B | 95.349 | 43 | 2 | 0 | 1275 | 1317 | 26357694 | 26357736 | 1.280000e-07 | 69.4 |
102 | TraesCS7B01G043400 | chr6D | 80.195 | 616 | 81 | 28 | 1 | 594 | 54849445 | 54850041 | 2.360000e-114 | 424.0 |
103 | TraesCS7B01G043400 | chr4D | 74.746 | 689 | 156 | 15 | 1370 | 2044 | 314659608 | 314658924 | 6.960000e-75 | 292.0 |
104 | TraesCS7B01G043400 | chr1D | 90.968 | 155 | 12 | 2 | 3334 | 3488 | 408459843 | 408459691 | 2.590000e-49 | 207.0 |
105 | TraesCS7B01G043400 | chr1D | 97.500 | 40 | 1 | 0 | 1278 | 1317 | 216264 | 216225 | 1.280000e-07 | 69.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G043400 | chr7B | 43243954 | 43251045 | 7091 | False | 6261.000000 | 11448 | 100.000000 | 1 | 7092 | 2 | chr7B.!!$F3 | 7091 |
1 | TraesCS7B01G043400 | chr7B | 678292486 | 678293058 | 572 | False | 782.000000 | 782 | 91.289000 | 6519 | 7092 | 1 | chr7B.!!$F2 | 573 |
2 | TraesCS7B01G043400 | chr7B | 670238783 | 670239363 | 580 | False | 758.000000 | 758 | 90.206000 | 6512 | 7092 | 1 | chr7B.!!$F1 | 580 |
3 | TraesCS7B01G043400 | chr7D | 91678508 | 91681365 | 2857 | True | 962.333333 | 1709 | 92.826333 | 3789 | 6199 | 3 | chr7D.!!$R6 | 2410 |
4 | TraesCS7B01G043400 | chr7D | 98997202 | 98997895 | 693 | True | 787.000000 | 787 | 87.644000 | 1370 | 2044 | 1 | chr7D.!!$R1 | 674 |
5 | TraesCS7B01G043400 | chr7D | 91687514 | 91690712 | 3198 | True | 731.200000 | 1094 | 90.564400 | 594 | 3795 | 5 | chr7D.!!$R7 | 3201 |
6 | TraesCS7B01G043400 | chr7A | 93251285 | 93257547 | 6262 | True | 693.666667 | 1652 | 90.955333 | 595 | 6196 | 9 | chr7A.!!$R4 | 5601 |
7 | TraesCS7B01G043400 | chr7A | 625523192 | 625523792 | 600 | False | 453.000000 | 453 | 80.914000 | 1 | 592 | 1 | chr7A.!!$F3 | 591 |
8 | TraesCS7B01G043400 | chr2D | 346575570 | 346577372 | 1802 | False | 940.000000 | 1336 | 86.719500 | 3572 | 6193 | 2 | chr2D.!!$F4 | 2621 |
9 | TraesCS7B01G043400 | chr2D | 119841077 | 119842000 | 923 | False | 483.800000 | 876 | 88.404500 | 1378 | 2304 | 2 | chr2D.!!$F3 | 926 |
10 | TraesCS7B01G043400 | chr2A | 460900440 | 460902186 | 1746 | False | 903.000000 | 1312 | 87.059000 | 3575 | 6193 | 2 | chr2A.!!$F1 | 2618 |
11 | TraesCS7B01G043400 | chr2A | 722211060 | 722211658 | 598 | True | 429.000000 | 429 | 80.131000 | 1 | 592 | 1 | chr2A.!!$R2 | 591 |
12 | TraesCS7B01G043400 | chr2B | 9036564 | 9037142 | 578 | False | 852.000000 | 852 | 93.264000 | 6515 | 7092 | 1 | chr2B.!!$F1 | 577 |
13 | TraesCS7B01G043400 | chr2B | 669434913 | 669435519 | 606 | False | 806.000000 | 806 | 90.969000 | 1 | 596 | 1 | chr2B.!!$F3 | 595 |
14 | TraesCS7B01G043400 | chr2B | 26722567 | 26723140 | 573 | True | 795.000000 | 795 | 91.638000 | 6518 | 7091 | 1 | chr2B.!!$R1 | 573 |
15 | TraesCS7B01G043400 | chr2B | 412400415 | 412402169 | 1754 | False | 615.833333 | 1303 | 86.885000 | 3571 | 6193 | 3 | chr2B.!!$F4 | 2622 |
16 | TraesCS7B01G043400 | chr2B | 81537654 | 81538254 | 600 | False | 401.000000 | 401 | 79.520000 | 1 | 601 | 1 | chr2B.!!$F2 | 600 |
17 | TraesCS7B01G043400 | chr6A | 483565913 | 483566510 | 597 | False | 1055.000000 | 1055 | 98.495000 | 1 | 598 | 1 | chr6A.!!$F3 | 597 |
18 | TraesCS7B01G043400 | chr6A | 394638254 | 394639342 | 1088 | False | 1003.000000 | 1003 | 83.482000 | 1377 | 2484 | 1 | chr6A.!!$F2 | 1107 |
19 | TraesCS7B01G043400 | chr6B | 72342675 | 72343277 | 602 | True | 1026.000000 | 1026 | 97.347000 | 1 | 603 | 1 | chr6B.!!$R1 | 602 |
20 | TraesCS7B01G043400 | chr3A | 224963146 | 224964239 | 1093 | False | 987.000000 | 987 | 83.126000 | 1370 | 2483 | 1 | chr3A.!!$F3 | 1113 |
21 | TraesCS7B01G043400 | chr3A | 743123977 | 743124555 | 578 | True | 747.000000 | 747 | 89.983000 | 6515 | 7092 | 1 | chr3A.!!$R3 | 577 |
22 | TraesCS7B01G043400 | chr4A | 574770663 | 574771659 | 996 | True | 922.000000 | 922 | 83.560000 | 1370 | 2385 | 1 | chr4A.!!$R1 | 1015 |
23 | TraesCS7B01G043400 | chr4A | 620474641 | 620475720 | 1079 | False | 603.500000 | 691 | 87.432000 | 1370 | 2477 | 2 | chr4A.!!$F2 | 1107 |
24 | TraesCS7B01G043400 | chr1B | 41364931 | 41365508 | 577 | True | 852.000000 | 852 | 93.253000 | 6515 | 7092 | 1 | chr1B.!!$R1 | 577 |
25 | TraesCS7B01G043400 | chr3B | 753180673 | 753181250 | 577 | True | 824.000000 | 824 | 92.388000 | 6515 | 7092 | 1 | chr3B.!!$R2 | 577 |
26 | TraesCS7B01G043400 | chr3B | 173363883 | 173364455 | 572 | True | 756.000000 | 756 | 90.435000 | 6518 | 7092 | 1 | chr3B.!!$R1 | 574 |
27 | TraesCS7B01G043400 | chr5A | 9589850 | 9596773 | 6923 | True | 511.500000 | 761 | 88.918167 | 822 | 6199 | 6 | chr5A.!!$R2 | 5377 |
28 | TraesCS7B01G043400 | chr5D | 543586061 | 543587234 | 1173 | True | 489.000000 | 756 | 88.924500 | 3822 | 6100 | 2 | chr5D.!!$R2 | 2278 |
29 | TraesCS7B01G043400 | chrUn | 42167756 | 42168335 | 579 | False | 723.000000 | 723 | 89.157000 | 6512 | 7092 | 1 | chrUn.!!$F1 | 580 |
30 | TraesCS7B01G043400 | chr4B | 377950269 | 377950975 | 706 | True | 350.500000 | 599 | 89.081000 | 1370 | 2044 | 2 | chr4B.!!$R2 | 674 |
31 | TraesCS7B01G043400 | chr4B | 6640150 | 6640689 | 539 | True | 309.000000 | 309 | 77.407000 | 1371 | 1897 | 1 | chr4B.!!$R1 | 526 |
32 | TraesCS7B01G043400 | chr6D | 54849445 | 54850041 | 596 | False | 424.000000 | 424 | 80.195000 | 1 | 594 | 1 | chr6D.!!$F1 | 593 |
33 | TraesCS7B01G043400 | chr4D | 314658924 | 314659608 | 684 | True | 292.000000 | 292 | 74.746000 | 1370 | 2044 | 1 | chr4D.!!$R1 | 674 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
997 | 1170 | 1.073125 | TCCGTTGGCCATCTTCTTTCA | 59.927 | 47.619 | 6.09 | 0.00 | 0.00 | 2.69 | F |
1751 | 2031 | 0.668535 | GACCAAATTCCATAGGCGCC | 59.331 | 55.000 | 21.89 | 21.89 | 0.00 | 6.53 | F |
2050 | 2352 | 0.109272 | CTCTGCGTGCTCCGAAGTAA | 60.109 | 55.000 | 4.58 | 0.00 | 43.26 | 2.24 | F |
2189 | 2491 | 0.174617 | CCTTCCTTGAGAGCGTCTCC | 59.825 | 60.000 | 11.01 | 2.14 | 42.73 | 3.71 | F |
4106 | 6352 | 0.324738 | AACTGATGGAGAGAGGCGGA | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 | F |
4716 | 6981 | 0.107508 | ACCGTGCATGGAGAAGATGG | 60.108 | 55.000 | 31.74 | 1.37 | 0.00 | 3.51 | F |
4717 | 6982 | 0.178767 | CCGTGCATGGAGAAGATGGA | 59.821 | 55.000 | 21.08 | 0.00 | 0.00 | 3.41 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2023 | 2325 | 0.248990 | GAGCACGCAGAGGATGAGAG | 60.249 | 60.0 | 0.0 | 0.0 | 32.27 | 3.20 | R |
3105 | 3858 | 0.696501 | GGACCCAACACCAGGTATGT | 59.303 | 55.0 | 0.0 | 0.0 | 36.17 | 2.29 | R |
3658 | 5882 | 1.576356 | CAGGCAAATCTCTCTACGCC | 58.424 | 55.0 | 0.0 | 0.0 | 39.90 | 5.68 | R |
4118 | 6364 | 0.113776 | TCTAGACGTCAGGGGGTGTT | 59.886 | 55.0 | 19.5 | 0.0 | 0.00 | 3.32 | R |
5136 | 8212 | 0.248289 | CGGGAAAAGGAGCGGTAGAA | 59.752 | 55.0 | 0.0 | 0.0 | 0.00 | 2.10 | R |
5938 | 12523 | 0.689623 | CCAAGAACTCCAGGTCTGCT | 59.310 | 55.0 | 0.0 | 0.0 | 0.00 | 4.24 | R |
6615 | 13217 | 0.966920 | CAACTGTGTAGGGAGGACGT | 59.033 | 55.0 | 0.0 | 0.0 | 0.00 | 4.34 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
373 | 422 | 1.077068 | CGGGGAGACAGAGAGAGCT | 60.077 | 63.158 | 0.00 | 0.00 | 0.00 | 4.09 |
644 | 694 | 6.703319 | TCAGACTTTTTAACCATATCCGTGA | 58.297 | 36.000 | 0.00 | 0.00 | 0.00 | 4.35 |
694 | 744 | 1.446099 | GAGCGGTCAACAGCGATGA | 60.446 | 57.895 | 8.12 | 0.00 | 43.40 | 2.92 |
776 | 826 | 4.492160 | GATCGAGCGGTGCGACCA | 62.492 | 66.667 | 10.45 | 0.00 | 40.94 | 4.02 |
777 | 827 | 4.498520 | ATCGAGCGGTGCGACCAG | 62.499 | 66.667 | 10.45 | 1.17 | 40.94 | 4.00 |
867 | 918 | 2.718663 | CGTCCGCGTGTGTGTATATAA | 58.281 | 47.619 | 4.92 | 0.00 | 0.00 | 0.98 |
997 | 1170 | 1.073125 | TCCGTTGGCCATCTTCTTTCA | 59.927 | 47.619 | 6.09 | 0.00 | 0.00 | 2.69 |
998 | 1171 | 1.885887 | CCGTTGGCCATCTTCTTTCAA | 59.114 | 47.619 | 6.09 | 0.00 | 0.00 | 2.69 |
1142 | 1321 | 1.719529 | TTTATTCGGGATAGCGGGGA | 58.280 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
1152 | 1331 | 3.935456 | TAGCGGGGAAAGAGGGCCA | 62.935 | 63.158 | 6.18 | 0.00 | 0.00 | 5.36 |
1184 | 1411 | 8.097038 | TGTGAGTTTGCTCTGTATTCTATTCTT | 58.903 | 33.333 | 0.00 | 0.00 | 42.13 | 2.52 |
1233 | 1461 | 4.776435 | TGATATGGCTGATTCACTGGAA | 57.224 | 40.909 | 0.00 | 0.00 | 37.45 | 3.53 |
1270 | 1498 | 7.065803 | TCACTGCCTATTTGATTAGTTAGCAAC | 59.934 | 37.037 | 0.00 | 0.00 | 0.00 | 4.17 |
1273 | 1501 | 8.433421 | TGCCTATTTGATTAGTTAGCAACTAC | 57.567 | 34.615 | 7.87 | 1.16 | 43.30 | 2.73 |
1274 | 1502 | 8.265055 | TGCCTATTTGATTAGTTAGCAACTACT | 58.735 | 33.333 | 7.87 | 4.23 | 43.30 | 2.57 |
1275 | 1503 | 8.766151 | GCCTATTTGATTAGTTAGCAACTACTC | 58.234 | 37.037 | 14.10 | 14.10 | 43.30 | 2.59 |
1276 | 1504 | 9.262358 | CCTATTTGATTAGTTAGCAACTACTCC | 57.738 | 37.037 | 16.36 | 8.13 | 43.30 | 3.85 |
1277 | 1505 | 9.262358 | CTATTTGATTAGTTAGCAACTACTCCC | 57.738 | 37.037 | 16.36 | 6.60 | 43.30 | 4.30 |
1278 | 1506 | 6.869206 | TTGATTAGTTAGCAACTACTCCCT | 57.131 | 37.500 | 16.36 | 0.00 | 43.30 | 4.20 |
1280 | 1508 | 7.344095 | TGATTAGTTAGCAACTACTCCCTAC | 57.656 | 40.000 | 16.36 | 0.00 | 43.30 | 3.18 |
1281 | 1509 | 6.323225 | TGATTAGTTAGCAACTACTCCCTACC | 59.677 | 42.308 | 16.36 | 1.92 | 43.30 | 3.18 |
1282 | 1510 | 4.334208 | AGTTAGCAACTACTCCCTACCT | 57.666 | 45.455 | 0.44 | 0.00 | 40.69 | 3.08 |
1283 | 1511 | 4.685807 | AGTTAGCAACTACTCCCTACCTT | 58.314 | 43.478 | 0.44 | 0.00 | 40.69 | 3.50 |
1284 | 1512 | 5.835582 | AGTTAGCAACTACTCCCTACCTTA | 58.164 | 41.667 | 0.44 | 0.00 | 40.69 | 2.69 |
1285 | 1513 | 5.892686 | AGTTAGCAACTACTCCCTACCTTAG | 59.107 | 44.000 | 0.44 | 0.00 | 40.69 | 2.18 |
1286 | 1514 | 4.334208 | AGCAACTACTCCCTACCTTAGT | 57.666 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
1287 | 1515 | 4.024670 | AGCAACTACTCCCTACCTTAGTG | 58.975 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
1288 | 1516 | 4.021916 | GCAACTACTCCCTACCTTAGTGA | 58.978 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
1289 | 1517 | 4.650131 | GCAACTACTCCCTACCTTAGTGAT | 59.350 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
1290 | 1518 | 5.221283 | GCAACTACTCCCTACCTTAGTGATC | 60.221 | 48.000 | 0.00 | 0.00 | 0.00 | 2.92 |
1291 | 1519 | 5.998128 | ACTACTCCCTACCTTAGTGATCT | 57.002 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
1292 | 1520 | 7.288560 | CAACTACTCCCTACCTTAGTGATCTA | 58.711 | 42.308 | 0.00 | 0.00 | 0.00 | 1.98 |
1293 | 1521 | 7.463054 | ACTACTCCCTACCTTAGTGATCTAA | 57.537 | 40.000 | 0.00 | 0.00 | 35.25 | 2.10 |
1294 | 1522 | 7.880623 | ACTACTCCCTACCTTAGTGATCTAAA | 58.119 | 38.462 | 0.00 | 0.00 | 35.98 | 1.85 |
1295 | 1523 | 7.779326 | ACTACTCCCTACCTTAGTGATCTAAAC | 59.221 | 40.741 | 0.00 | 0.00 | 35.98 | 2.01 |
1296 | 1524 | 5.593502 | ACTCCCTACCTTAGTGATCTAAACG | 59.406 | 44.000 | 0.00 | 0.00 | 35.98 | 3.60 |
1297 | 1525 | 5.513233 | TCCCTACCTTAGTGATCTAAACGT | 58.487 | 41.667 | 0.00 | 0.00 | 35.98 | 3.99 |
1298 | 1526 | 5.954150 | TCCCTACCTTAGTGATCTAAACGTT | 59.046 | 40.000 | 0.00 | 0.00 | 35.98 | 3.99 |
1299 | 1527 | 6.096001 | TCCCTACCTTAGTGATCTAAACGTTC | 59.904 | 42.308 | 0.00 | 0.00 | 35.98 | 3.95 |
1300 | 1528 | 6.096564 | CCCTACCTTAGTGATCTAAACGTTCT | 59.903 | 42.308 | 0.00 | 0.00 | 35.98 | 3.01 |
1301 | 1529 | 7.363617 | CCCTACCTTAGTGATCTAAACGTTCTT | 60.364 | 40.741 | 0.00 | 0.00 | 35.98 | 2.52 |
1302 | 1530 | 8.680903 | CCTACCTTAGTGATCTAAACGTTCTTA | 58.319 | 37.037 | 0.00 | 0.00 | 35.98 | 2.10 |
1357 | 1585 | 0.853530 | AGTTGTTTCCTGGGCCTCTT | 59.146 | 50.000 | 4.53 | 0.00 | 0.00 | 2.85 |
1358 | 1586 | 1.217942 | AGTTGTTTCCTGGGCCTCTTT | 59.782 | 47.619 | 4.53 | 0.00 | 0.00 | 2.52 |
1444 | 1679 | 5.003804 | AGAGTTTGAATTGCACCTCGTAAT | 58.996 | 37.500 | 0.00 | 0.00 | 32.59 | 1.89 |
1445 | 1680 | 5.046910 | AGTTTGAATTGCACCTCGTAATG | 57.953 | 39.130 | 0.00 | 0.00 | 29.40 | 1.90 |
1453 | 1730 | 2.811431 | TGCACCTCGTAATGGAAAACTG | 59.189 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
1455 | 1732 | 3.252458 | GCACCTCGTAATGGAAAACTGTT | 59.748 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
1578 | 1857 | 2.281276 | GACCCAGGCGTTCCGTTT | 60.281 | 61.111 | 0.00 | 0.00 | 37.47 | 3.60 |
1592 | 1871 | 4.678622 | GTTCCGTTTGTTTCAAATGGTCT | 58.321 | 39.130 | 23.78 | 0.00 | 37.52 | 3.85 |
1670 | 1949 | 5.985175 | TGATCTATTTACCCACCATTCCA | 57.015 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
1751 | 2031 | 0.668535 | GACCAAATTCCATAGGCGCC | 59.331 | 55.000 | 21.89 | 21.89 | 0.00 | 6.53 |
1752 | 2032 | 0.755327 | ACCAAATTCCATAGGCGCCC | 60.755 | 55.000 | 26.15 | 5.07 | 0.00 | 6.13 |
1756 | 2036 | 2.676163 | AATTCCATAGGCGCCCGGTC | 62.676 | 60.000 | 26.15 | 0.00 | 0.00 | 4.79 |
2017 | 2319 | 2.743752 | CCATCTGTGGCGTGCTTCG | 61.744 | 63.158 | 0.00 | 0.00 | 39.01 | 3.79 |
2023 | 2325 | 0.942410 | TGTGGCGTGCTTCGAAGTAC | 60.942 | 55.000 | 29.70 | 29.70 | 42.86 | 2.73 |
2038 | 2340 | 2.428544 | AGTACTCTCATCCTCTGCGT | 57.571 | 50.000 | 0.00 | 0.00 | 0.00 | 5.24 |
2039 | 2341 | 2.020720 | AGTACTCTCATCCTCTGCGTG | 58.979 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
2040 | 2342 | 0.741326 | TACTCTCATCCTCTGCGTGC | 59.259 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2041 | 2343 | 0.969917 | ACTCTCATCCTCTGCGTGCT | 60.970 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2042 | 2344 | 0.248990 | CTCTCATCCTCTGCGTGCTC | 60.249 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2043 | 2345 | 1.227205 | CTCATCCTCTGCGTGCTCC | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
2044 | 2346 | 2.584418 | CATCCTCTGCGTGCTCCG | 60.584 | 66.667 | 0.00 | 0.00 | 40.40 | 4.63 |
2045 | 2347 | 2.755876 | ATCCTCTGCGTGCTCCGA | 60.756 | 61.111 | 0.43 | 0.00 | 39.56 | 4.55 |
2046 | 2348 | 2.351244 | ATCCTCTGCGTGCTCCGAA | 61.351 | 57.895 | 0.43 | 0.00 | 39.56 | 4.30 |
2047 | 2349 | 2.290122 | ATCCTCTGCGTGCTCCGAAG | 62.290 | 60.000 | 0.43 | 0.00 | 44.22 | 3.79 |
2048 | 2350 | 2.259818 | CTCTGCGTGCTCCGAAGT | 59.740 | 61.111 | 4.58 | 0.00 | 43.26 | 3.01 |
2049 | 2351 | 1.506718 | CTCTGCGTGCTCCGAAGTA | 59.493 | 57.895 | 4.58 | 0.00 | 43.26 | 2.24 |
2050 | 2352 | 0.109272 | CTCTGCGTGCTCCGAAGTAA | 60.109 | 55.000 | 4.58 | 0.00 | 43.26 | 2.24 |
2051 | 2353 | 0.530744 | TCTGCGTGCTCCGAAGTAAT | 59.469 | 50.000 | 4.58 | 0.00 | 43.26 | 1.89 |
2052 | 2354 | 0.924090 | CTGCGTGCTCCGAAGTAATC | 59.076 | 55.000 | 0.43 | 0.00 | 37.45 | 1.75 |
2053 | 2355 | 0.530744 | TGCGTGCTCCGAAGTAATCT | 59.469 | 50.000 | 0.43 | 0.00 | 39.56 | 2.40 |
2054 | 2356 | 1.201343 | GCGTGCTCCGAAGTAATCTC | 58.799 | 55.000 | 0.43 | 0.00 | 39.56 | 2.75 |
2055 | 2357 | 1.469251 | GCGTGCTCCGAAGTAATCTCA | 60.469 | 52.381 | 0.43 | 0.00 | 39.56 | 3.27 |
2056 | 2358 | 2.799917 | GCGTGCTCCGAAGTAATCTCAT | 60.800 | 50.000 | 0.43 | 0.00 | 39.56 | 2.90 |
2057 | 2359 | 3.046390 | CGTGCTCCGAAGTAATCTCATC | 58.954 | 50.000 | 0.00 | 0.00 | 39.56 | 2.92 |
2058 | 2360 | 3.385577 | GTGCTCCGAAGTAATCTCATCC | 58.614 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2059 | 2361 | 3.068873 | GTGCTCCGAAGTAATCTCATCCT | 59.931 | 47.826 | 0.00 | 0.00 | 0.00 | 3.24 |
2060 | 2362 | 3.319405 | TGCTCCGAAGTAATCTCATCCTC | 59.681 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
2061 | 2363 | 3.572255 | GCTCCGAAGTAATCTCATCCTCT | 59.428 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
2062 | 2364 | 4.558496 | GCTCCGAAGTAATCTCATCCTCTG | 60.558 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
2063 | 2365 | 3.319405 | TCCGAAGTAATCTCATCCTCTGC | 59.681 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
2064 | 2366 | 3.304257 | CGAAGTAATCTCATCCTCTGCG | 58.696 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
2145 | 2447 | 4.202357 | TGTGTCATAGAGAAGTTGGCAGTT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2189 | 2491 | 0.174617 | CCTTCCTTGAGAGCGTCTCC | 59.825 | 60.000 | 11.01 | 2.14 | 42.73 | 3.71 |
2199 | 2501 | 0.683504 | GAGCGTCTCCCACCTTCCTA | 60.684 | 60.000 | 0.00 | 0.00 | 0.00 | 2.94 |
2260 | 2564 | 1.600957 | CAATAGACTTCCTGCCATGCG | 59.399 | 52.381 | 0.00 | 0.00 | 0.00 | 4.73 |
2315 | 2620 | 4.576463 | CCCATTTCCAACAGTGATAGTAGC | 59.424 | 45.833 | 0.00 | 0.00 | 0.00 | 3.58 |
2349 | 2654 | 6.633500 | AAGAAATCACGGTTCTTTTCATCA | 57.367 | 33.333 | 8.85 | 0.00 | 41.47 | 3.07 |
2350 | 2655 | 6.824305 | AGAAATCACGGTTCTTTTCATCAT | 57.176 | 33.333 | 8.85 | 0.00 | 31.10 | 2.45 |
2426 | 2737 | 2.355986 | AACGTAGATGGAGGGCGCA | 61.356 | 57.895 | 10.83 | 0.00 | 0.00 | 6.09 |
2477 | 2788 | 1.046472 | CCTCCACGGTAGTATGGGCA | 61.046 | 60.000 | 0.00 | 0.00 | 36.56 | 5.36 |
2577 | 2888 | 1.155042 | GGAGAGCAGCACTTTGTCAG | 58.845 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2619 | 2930 | 7.232127 | ACAGAAAGATTGATCTGAACACCAAAT | 59.768 | 33.333 | 9.56 | 0.00 | 44.64 | 2.32 |
2620 | 2931 | 7.754027 | CAGAAAGATTGATCTGAACACCAAATC | 59.246 | 37.037 | 0.00 | 0.00 | 44.64 | 2.17 |
2768 | 3090 | 3.064931 | GTTGGCTTACTTGTTAGCTCGT | 58.935 | 45.455 | 10.82 | 0.00 | 37.54 | 4.18 |
2810 | 3132 | 2.745884 | TTCGAATGCTGGCACGGG | 60.746 | 61.111 | 0.00 | 0.00 | 33.56 | 5.28 |
2890 | 3222 | 1.067915 | CCCACAAAATAACCTGCCACG | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
2929 | 3266 | 2.317609 | CGGCCAGTTTCACCGTCAG | 61.318 | 63.158 | 2.24 | 0.00 | 42.01 | 3.51 |
2932 | 3269 | 1.145803 | GCCAGTTTCACCGTCAGTAC | 58.854 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2966 | 3342 | 4.737765 | GCAGTTGACTTGCAAAAATTACGA | 59.262 | 37.500 | 0.00 | 0.00 | 38.44 | 3.43 |
2994 | 3370 | 4.079615 | TGGTACCACTCCACTAGCACTATA | 60.080 | 45.833 | 11.60 | 0.00 | 0.00 | 1.31 |
3078 | 3831 | 5.978322 | CGGCTTTAGGACTAGTTAAGATGTC | 59.022 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3105 | 3858 | 9.073475 | ACAGTGAAATTAGTTAAATAGGTTGCA | 57.927 | 29.630 | 0.00 | 0.00 | 0.00 | 4.08 |
3123 | 3876 | 1.821216 | CACATACCTGGTGTTGGGTC | 58.179 | 55.000 | 10.23 | 0.00 | 37.07 | 4.46 |
3137 | 3890 | 0.404040 | TGGGTCCTCGGAAAAAGCAT | 59.596 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
3150 | 3977 | 5.983118 | CGGAAAAAGCATTGAATAATACCCC | 59.017 | 40.000 | 0.00 | 0.00 | 0.00 | 4.95 |
3261 | 4177 | 7.984422 | TTTTGTATTGTGATCATGACTCAGT | 57.016 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3310 | 4235 | 1.610522 | GTGCTGATTTGTGAGCCAGTT | 59.389 | 47.619 | 0.00 | 0.00 | 34.04 | 3.16 |
3360 | 4285 | 7.320399 | CAAATTTTAACATGGTCCCTCTTACC | 58.680 | 38.462 | 0.00 | 0.00 | 37.53 | 2.85 |
3362 | 4287 | 5.853572 | TTTAACATGGTCCCTCTTACCTT | 57.146 | 39.130 | 0.00 | 0.00 | 37.91 | 3.50 |
3363 | 4288 | 5.431179 | TTAACATGGTCCCTCTTACCTTC | 57.569 | 43.478 | 0.00 | 0.00 | 37.91 | 3.46 |
3405 | 4330 | 9.589111 | GAGGTAAGAAGGTAAGAGTTAATCAAG | 57.411 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
3428 | 4353 | 8.344831 | CAAGCCATTAATTAATGAGATCAACGA | 58.655 | 33.333 | 31.05 | 0.00 | 44.40 | 3.85 |
3554 | 4479 | 2.229062 | CTCAACTTCTGACGCCTGAGTA | 59.771 | 50.000 | 5.97 | 0.00 | 0.00 | 2.59 |
3582 | 4507 | 9.507329 | GCACCTCTAAATCCAAATATTGAGATA | 57.493 | 33.333 | 0.00 | 0.00 | 28.00 | 1.98 |
3658 | 5882 | 9.196552 | GATTCTTTTCACAAGAACCCTATTTTG | 57.803 | 33.333 | 0.00 | 0.00 | 38.88 | 2.44 |
3689 | 5913 | 3.772853 | TTGCCTGGCAGCTTGACGT | 62.773 | 57.895 | 22.17 | 0.00 | 40.61 | 4.34 |
3785 | 6018 | 9.846248 | ATTTCTTTCTTTCATGAAGATAAACCG | 57.154 | 29.630 | 8.41 | 1.51 | 43.65 | 4.44 |
3871 | 6109 | 4.630644 | TCAGCAAAGAAGAATGAGGTCT | 57.369 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
3978 | 6224 | 7.556635 | AGACTGCCTTTTATTCCAGGTAATTAC | 59.443 | 37.037 | 7.09 | 7.09 | 32.06 | 1.89 |
4053 | 6299 | 9.757227 | ATGAATTTTGTTTCGAGGTTTTATTGA | 57.243 | 25.926 | 0.00 | 0.00 | 0.00 | 2.57 |
4054 | 6300 | 9.587772 | TGAATTTTGTTTCGAGGTTTTATTGAA | 57.412 | 25.926 | 0.00 | 0.00 | 0.00 | 2.69 |
4058 | 6304 | 9.587772 | TTTTGTTTCGAGGTTTTATTGAATTCA | 57.412 | 25.926 | 3.38 | 3.38 | 0.00 | 2.57 |
4059 | 6305 | 9.757227 | TTTGTTTCGAGGTTTTATTGAATTCAT | 57.243 | 25.926 | 9.40 | 2.50 | 0.00 | 2.57 |
4060 | 6306 | 8.741101 | TGTTTCGAGGTTTTATTGAATTCATG | 57.259 | 30.769 | 9.40 | 0.00 | 0.00 | 3.07 |
4061 | 6307 | 7.328249 | TGTTTCGAGGTTTTATTGAATTCATGC | 59.672 | 33.333 | 9.40 | 0.00 | 0.00 | 4.06 |
4062 | 6308 | 6.757897 | TCGAGGTTTTATTGAATTCATGCT | 57.242 | 33.333 | 9.40 | 0.08 | 0.00 | 3.79 |
4063 | 6309 | 7.156876 | TCGAGGTTTTATTGAATTCATGCTT | 57.843 | 32.000 | 9.40 | 0.00 | 0.00 | 3.91 |
4064 | 6310 | 7.250569 | TCGAGGTTTTATTGAATTCATGCTTC | 58.749 | 34.615 | 9.40 | 2.16 | 0.00 | 3.86 |
4065 | 6311 | 7.028962 | CGAGGTTTTATTGAATTCATGCTTCA | 58.971 | 34.615 | 9.40 | 6.48 | 0.00 | 3.02 |
4066 | 6312 | 7.219535 | CGAGGTTTTATTGAATTCATGCTTCAG | 59.780 | 37.037 | 9.40 | 0.00 | 34.33 | 3.02 |
4067 | 6313 | 6.815142 | AGGTTTTATTGAATTCATGCTTCAGC | 59.185 | 34.615 | 9.40 | 2.51 | 42.50 | 4.26 |
4068 | 6314 | 6.036408 | GGTTTTATTGAATTCATGCTTCAGCC | 59.964 | 38.462 | 9.40 | 2.34 | 41.18 | 4.85 |
4069 | 6315 | 5.918426 | TTATTGAATTCATGCTTCAGCCA | 57.082 | 34.783 | 9.40 | 0.00 | 41.18 | 4.75 |
4070 | 6316 | 4.811969 | ATTGAATTCATGCTTCAGCCAA | 57.188 | 36.364 | 9.40 | 0.00 | 41.18 | 4.52 |
4071 | 6317 | 3.581024 | TGAATTCATGCTTCAGCCAAC | 57.419 | 42.857 | 3.38 | 0.00 | 41.18 | 3.77 |
4072 | 6318 | 3.159472 | TGAATTCATGCTTCAGCCAACT | 58.841 | 40.909 | 3.38 | 0.00 | 41.18 | 3.16 |
4073 | 6319 | 3.192001 | TGAATTCATGCTTCAGCCAACTC | 59.808 | 43.478 | 3.38 | 0.00 | 41.18 | 3.01 |
4074 | 6320 | 2.275134 | TTCATGCTTCAGCCAACTCA | 57.725 | 45.000 | 0.00 | 0.00 | 41.18 | 3.41 |
4075 | 6321 | 2.502142 | TCATGCTTCAGCCAACTCAT | 57.498 | 45.000 | 0.00 | 0.00 | 41.18 | 2.90 |
4076 | 6322 | 2.799017 | TCATGCTTCAGCCAACTCATT | 58.201 | 42.857 | 0.00 | 0.00 | 41.18 | 2.57 |
4077 | 6323 | 2.751259 | TCATGCTTCAGCCAACTCATTC | 59.249 | 45.455 | 0.00 | 0.00 | 41.18 | 2.67 |
4078 | 6324 | 2.275134 | TGCTTCAGCCAACTCATTCA | 57.725 | 45.000 | 0.00 | 0.00 | 41.18 | 2.57 |
4079 | 6325 | 2.585330 | TGCTTCAGCCAACTCATTCAA | 58.415 | 42.857 | 0.00 | 0.00 | 41.18 | 2.69 |
4080 | 6326 | 2.957680 | TGCTTCAGCCAACTCATTCAAA | 59.042 | 40.909 | 0.00 | 0.00 | 41.18 | 2.69 |
4081 | 6327 | 3.384146 | TGCTTCAGCCAACTCATTCAAAA | 59.616 | 39.130 | 0.00 | 0.00 | 41.18 | 2.44 |
4082 | 6328 | 3.985925 | GCTTCAGCCAACTCATTCAAAAG | 59.014 | 43.478 | 0.00 | 0.00 | 34.31 | 2.27 |
4083 | 6329 | 4.500375 | GCTTCAGCCAACTCATTCAAAAGT | 60.500 | 41.667 | 0.00 | 0.00 | 34.31 | 2.66 |
4084 | 6330 | 4.836125 | TCAGCCAACTCATTCAAAAGTC | 57.164 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
4085 | 6331 | 3.569701 | TCAGCCAACTCATTCAAAAGTCC | 59.430 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
4086 | 6332 | 3.318839 | CAGCCAACTCATTCAAAAGTCCA | 59.681 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
4087 | 6333 | 3.960102 | AGCCAACTCATTCAAAAGTCCAA | 59.040 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
4088 | 6334 | 4.405358 | AGCCAACTCATTCAAAAGTCCAAA | 59.595 | 37.500 | 0.00 | 0.00 | 0.00 | 3.28 |
4089 | 6335 | 4.507756 | GCCAACTCATTCAAAAGTCCAAAC | 59.492 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
4090 | 6336 | 5.682212 | GCCAACTCATTCAAAAGTCCAAACT | 60.682 | 40.000 | 0.00 | 0.00 | 37.32 | 2.66 |
4091 | 6337 | 5.750067 | CCAACTCATTCAAAAGTCCAAACTG | 59.250 | 40.000 | 0.00 | 0.00 | 35.36 | 3.16 |
4092 | 6338 | 6.405731 | CCAACTCATTCAAAAGTCCAAACTGA | 60.406 | 38.462 | 0.00 | 0.00 | 35.36 | 3.41 |
4093 | 6339 | 6.966534 | ACTCATTCAAAAGTCCAAACTGAT | 57.033 | 33.333 | 0.00 | 0.00 | 35.36 | 2.90 |
4094 | 6340 | 6.742109 | ACTCATTCAAAAGTCCAAACTGATG | 58.258 | 36.000 | 0.00 | 0.00 | 35.36 | 3.07 |
4095 | 6341 | 6.088016 | TCATTCAAAAGTCCAAACTGATGG | 57.912 | 37.500 | 0.00 | 0.00 | 42.12 | 3.51 |
4103 | 6349 | 1.556911 | TCCAAACTGATGGAGAGAGGC | 59.443 | 52.381 | 3.42 | 0.00 | 44.52 | 4.70 |
4104 | 6350 | 1.649664 | CAAACTGATGGAGAGAGGCG | 58.350 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
4105 | 6351 | 0.539051 | AAACTGATGGAGAGAGGCGG | 59.461 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
4106 | 6352 | 0.324738 | AACTGATGGAGAGAGGCGGA | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
4107 | 6353 | 1.040339 | ACTGATGGAGAGAGGCGGAC | 61.040 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4108 | 6354 | 1.000359 | TGATGGAGAGAGGCGGACA | 60.000 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
4109 | 6355 | 0.614697 | TGATGGAGAGAGGCGGACAA | 60.615 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4110 | 6356 | 0.755686 | GATGGAGAGAGGCGGACAAT | 59.244 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
4111 | 6357 | 1.964223 | GATGGAGAGAGGCGGACAATA | 59.036 | 52.381 | 0.00 | 0.00 | 0.00 | 1.90 |
4112 | 6358 | 2.088104 | TGGAGAGAGGCGGACAATAT | 57.912 | 50.000 | 0.00 | 0.00 | 0.00 | 1.28 |
4113 | 6359 | 3.238788 | TGGAGAGAGGCGGACAATATA | 57.761 | 47.619 | 0.00 | 0.00 | 0.00 | 0.86 |
4114 | 6360 | 2.891580 | TGGAGAGAGGCGGACAATATAC | 59.108 | 50.000 | 0.00 | 0.00 | 0.00 | 1.47 |
4115 | 6361 | 3.158676 | GGAGAGAGGCGGACAATATACT | 58.841 | 50.000 | 0.00 | 0.00 | 0.00 | 2.12 |
4116 | 6362 | 3.574826 | GGAGAGAGGCGGACAATATACTT | 59.425 | 47.826 | 0.00 | 0.00 | 0.00 | 2.24 |
4117 | 6363 | 4.321378 | GGAGAGAGGCGGACAATATACTTC | 60.321 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4118 | 6364 | 4.215908 | AGAGAGGCGGACAATATACTTCA | 58.784 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
4119 | 6365 | 4.649674 | AGAGAGGCGGACAATATACTTCAA | 59.350 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
4120 | 6366 | 4.694339 | AGAGGCGGACAATATACTTCAAC | 58.306 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
4121 | 6367 | 4.161565 | AGAGGCGGACAATATACTTCAACA | 59.838 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
4122 | 6368 | 4.189231 | AGGCGGACAATATACTTCAACAC | 58.811 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
4123 | 6369 | 3.311596 | GGCGGACAATATACTTCAACACC | 59.688 | 47.826 | 0.00 | 0.00 | 0.00 | 4.16 |
4124 | 6370 | 3.311596 | GCGGACAATATACTTCAACACCC | 59.688 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
4125 | 6371 | 3.875134 | CGGACAATATACTTCAACACCCC | 59.125 | 47.826 | 0.00 | 0.00 | 0.00 | 4.95 |
4126 | 6372 | 4.204799 | GGACAATATACTTCAACACCCCC | 58.795 | 47.826 | 0.00 | 0.00 | 0.00 | 5.40 |
4127 | 6373 | 4.079958 | GGACAATATACTTCAACACCCCCT | 60.080 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
4128 | 6374 | 4.855340 | ACAATATACTTCAACACCCCCTG | 58.145 | 43.478 | 0.00 | 0.00 | 0.00 | 4.45 |
4129 | 6375 | 4.538490 | ACAATATACTTCAACACCCCCTGA | 59.462 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
4130 | 6376 | 4.772886 | ATATACTTCAACACCCCCTGAC | 57.227 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
4131 | 6377 | 0.682852 | TACTTCAACACCCCCTGACG | 59.317 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
4132 | 6378 | 1.342672 | ACTTCAACACCCCCTGACGT | 61.343 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
4133 | 6379 | 0.602905 | CTTCAACACCCCCTGACGTC | 60.603 | 60.000 | 9.11 | 9.11 | 0.00 | 4.34 |
4134 | 6380 | 1.052124 | TTCAACACCCCCTGACGTCT | 61.052 | 55.000 | 17.92 | 0.00 | 0.00 | 4.18 |
4135 | 6381 | 0.178955 | TCAACACCCCCTGACGTCTA | 60.179 | 55.000 | 17.92 | 2.26 | 0.00 | 2.59 |
4136 | 6382 | 0.246635 | CAACACCCCCTGACGTCTAG | 59.753 | 60.000 | 17.92 | 12.00 | 0.00 | 2.43 |
4137 | 6383 | 0.113776 | AACACCCCCTGACGTCTAGA | 59.886 | 55.000 | 17.92 | 0.00 | 0.00 | 2.43 |
4138 | 6384 | 0.611340 | ACACCCCCTGACGTCTAGAC | 60.611 | 60.000 | 17.92 | 13.18 | 0.00 | 2.59 |
4139 | 6385 | 0.323542 | CACCCCCTGACGTCTAGACT | 60.324 | 60.000 | 20.34 | 7.83 | 0.00 | 3.24 |
4140 | 6386 | 0.408700 | ACCCCCTGACGTCTAGACTT | 59.591 | 55.000 | 20.34 | 11.64 | 0.00 | 3.01 |
4141 | 6387 | 1.637553 | ACCCCCTGACGTCTAGACTTA | 59.362 | 52.381 | 20.34 | 5.95 | 0.00 | 2.24 |
4142 | 6388 | 2.042162 | ACCCCCTGACGTCTAGACTTAA | 59.958 | 50.000 | 20.34 | 3.72 | 0.00 | 1.85 |
4143 | 6389 | 3.297736 | CCCCCTGACGTCTAGACTTAAT | 58.702 | 50.000 | 20.34 | 3.61 | 0.00 | 1.40 |
4144 | 6390 | 3.705072 | CCCCCTGACGTCTAGACTTAATT | 59.295 | 47.826 | 20.34 | 0.00 | 0.00 | 1.40 |
4145 | 6391 | 4.891756 | CCCCCTGACGTCTAGACTTAATTA | 59.108 | 45.833 | 20.34 | 0.37 | 0.00 | 1.40 |
4146 | 6392 | 5.009811 | CCCCCTGACGTCTAGACTTAATTAG | 59.990 | 48.000 | 20.34 | 9.06 | 0.00 | 1.73 |
4147 | 6393 | 5.593502 | CCCCTGACGTCTAGACTTAATTAGT | 59.406 | 44.000 | 20.34 | 8.97 | 40.71 | 2.24 |
4171 | 6417 | 8.608844 | GTCCTTAGACTTGGGATTTATGTATG | 57.391 | 38.462 | 0.44 | 0.00 | 40.10 | 2.39 |
4172 | 6418 | 8.211629 | GTCCTTAGACTTGGGATTTATGTATGT | 58.788 | 37.037 | 0.44 | 0.00 | 40.10 | 2.29 |
4173 | 6419 | 8.429641 | TCCTTAGACTTGGGATTTATGTATGTC | 58.570 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
4174 | 6420 | 7.385205 | CCTTAGACTTGGGATTTATGTATGTCG | 59.615 | 40.741 | 0.00 | 0.00 | 0.00 | 4.35 |
4175 | 6421 | 5.057149 | AGACTTGGGATTTATGTATGTCGC | 58.943 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
4176 | 6422 | 4.776349 | ACTTGGGATTTATGTATGTCGCA | 58.224 | 39.130 | 0.00 | 0.00 | 0.00 | 5.10 |
4177 | 6423 | 4.816385 | ACTTGGGATTTATGTATGTCGCAG | 59.184 | 41.667 | 0.00 | 0.00 | 35.42 | 5.18 |
4178 | 6424 | 4.681074 | TGGGATTTATGTATGTCGCAGA | 57.319 | 40.909 | 0.00 | 0.00 | 0.00 | 4.26 |
4179 | 6425 | 5.029807 | TGGGATTTATGTATGTCGCAGAA | 57.970 | 39.130 | 0.00 | 0.00 | 39.69 | 3.02 |
4180 | 6426 | 5.620206 | TGGGATTTATGTATGTCGCAGAAT | 58.380 | 37.500 | 0.00 | 0.00 | 39.69 | 2.40 |
4181 | 6427 | 5.700832 | TGGGATTTATGTATGTCGCAGAATC | 59.299 | 40.000 | 0.00 | 0.00 | 39.69 | 2.52 |
4182 | 6428 | 5.700832 | GGGATTTATGTATGTCGCAGAATCA | 59.299 | 40.000 | 0.00 | 0.00 | 39.69 | 2.57 |
4183 | 6429 | 6.372659 | GGGATTTATGTATGTCGCAGAATCAT | 59.627 | 38.462 | 0.00 | 0.00 | 39.69 | 2.45 |
4184 | 6430 | 7.094634 | GGGATTTATGTATGTCGCAGAATCATT | 60.095 | 37.037 | 0.00 | 0.00 | 39.69 | 2.57 |
4185 | 6431 | 8.292448 | GGATTTATGTATGTCGCAGAATCATTT | 58.708 | 33.333 | 0.00 | 0.00 | 39.69 | 2.32 |
4186 | 6432 | 9.669353 | GATTTATGTATGTCGCAGAATCATTTT | 57.331 | 29.630 | 0.00 | 0.00 | 39.69 | 1.82 |
4198 | 6444 | 9.663904 | TCGCAGAATCATTTTTATTAATACTGC | 57.336 | 29.630 | 14.35 | 14.35 | 41.18 | 4.40 |
4200 | 6446 | 9.450807 | GCAGAATCATTTTTATTAATACTGCGT | 57.549 | 29.630 | 11.04 | 0.00 | 36.91 | 5.24 |
4204 | 6450 | 7.979115 | TCATTTTTATTAATACTGCGTTGGC | 57.021 | 32.000 | 0.00 | 0.00 | 40.52 | 4.52 |
4216 | 6462 | 2.046283 | GCGTTGGCAAGGTCTTAAAC | 57.954 | 50.000 | 19.80 | 0.00 | 39.62 | 2.01 |
4217 | 6463 | 1.607148 | GCGTTGGCAAGGTCTTAAACT | 59.393 | 47.619 | 19.80 | 0.00 | 39.62 | 2.66 |
4218 | 6464 | 2.350484 | GCGTTGGCAAGGTCTTAAACTC | 60.350 | 50.000 | 19.80 | 0.00 | 39.62 | 3.01 |
4219 | 6465 | 2.875933 | CGTTGGCAAGGTCTTAAACTCA | 59.124 | 45.455 | 11.60 | 0.00 | 0.00 | 3.41 |
4220 | 6466 | 3.314080 | CGTTGGCAAGGTCTTAAACTCAA | 59.686 | 43.478 | 11.60 | 0.00 | 0.00 | 3.02 |
4221 | 6467 | 4.554723 | CGTTGGCAAGGTCTTAAACTCAAG | 60.555 | 45.833 | 11.60 | 0.00 | 0.00 | 3.02 |
4222 | 6468 | 4.431416 | TGGCAAGGTCTTAAACTCAAGA | 57.569 | 40.909 | 0.00 | 0.00 | 32.11 | 3.02 |
4240 | 6486 | 2.393646 | AGACCTCTTGGCTCTGATACC | 58.606 | 52.381 | 0.00 | 0.00 | 36.63 | 2.73 |
4241 | 6487 | 2.111384 | GACCTCTTGGCTCTGATACCA | 58.889 | 52.381 | 0.00 | 0.00 | 36.63 | 3.25 |
4242 | 6488 | 2.703007 | GACCTCTTGGCTCTGATACCAT | 59.297 | 50.000 | 0.91 | 0.00 | 35.42 | 3.55 |
4243 | 6489 | 3.898123 | GACCTCTTGGCTCTGATACCATA | 59.102 | 47.826 | 0.91 | 0.00 | 35.42 | 2.74 |
4244 | 6490 | 4.497516 | ACCTCTTGGCTCTGATACCATAT | 58.502 | 43.478 | 0.91 | 0.00 | 35.42 | 1.78 |
4245 | 6491 | 4.910304 | ACCTCTTGGCTCTGATACCATATT | 59.090 | 41.667 | 0.91 | 0.00 | 35.42 | 1.28 |
4246 | 6492 | 5.221803 | ACCTCTTGGCTCTGATACCATATTG | 60.222 | 44.000 | 0.91 | 0.00 | 35.42 | 1.90 |
4247 | 6493 | 5.012458 | CCTCTTGGCTCTGATACCATATTGA | 59.988 | 44.000 | 0.91 | 0.00 | 35.42 | 2.57 |
4248 | 6494 | 6.464892 | CCTCTTGGCTCTGATACCATATTGAA | 60.465 | 42.308 | 0.91 | 0.00 | 35.42 | 2.69 |
4249 | 6495 | 7.083062 | TCTTGGCTCTGATACCATATTGAAT | 57.917 | 36.000 | 0.91 | 0.00 | 35.42 | 2.57 |
4250 | 6496 | 7.520798 | TCTTGGCTCTGATACCATATTGAATT | 58.479 | 34.615 | 0.91 | 0.00 | 35.42 | 2.17 |
4251 | 6497 | 7.663081 | TCTTGGCTCTGATACCATATTGAATTC | 59.337 | 37.037 | 0.00 | 0.00 | 35.42 | 2.17 |
4252 | 6498 | 6.840527 | TGGCTCTGATACCATATTGAATTCA | 58.159 | 36.000 | 3.38 | 3.38 | 0.00 | 2.57 |
4253 | 6499 | 7.464273 | TGGCTCTGATACCATATTGAATTCAT | 58.536 | 34.615 | 9.40 | 2.50 | 0.00 | 2.57 |
4254 | 6500 | 7.392393 | TGGCTCTGATACCATATTGAATTCATG | 59.608 | 37.037 | 9.40 | 4.74 | 0.00 | 3.07 |
4255 | 6501 | 7.249147 | GCTCTGATACCATATTGAATTCATGC | 58.751 | 38.462 | 9.40 | 0.00 | 0.00 | 4.06 |
4256 | 6502 | 7.120873 | GCTCTGATACCATATTGAATTCATGCT | 59.879 | 37.037 | 9.40 | 0.08 | 0.00 | 3.79 |
4257 | 6503 | 8.929260 | TCTGATACCATATTGAATTCATGCTT | 57.071 | 30.769 | 9.40 | 0.00 | 0.00 | 3.91 |
4258 | 6504 | 9.358406 | TCTGATACCATATTGAATTCATGCTTT | 57.642 | 29.630 | 9.40 | 0.00 | 0.00 | 3.51 |
4259 | 6505 | 9.976511 | CTGATACCATATTGAATTCATGCTTTT | 57.023 | 29.630 | 9.40 | 0.00 | 0.00 | 2.27 |
4260 | 6506 | 9.970395 | TGATACCATATTGAATTCATGCTTTTC | 57.030 | 29.630 | 9.40 | 1.63 | 0.00 | 2.29 |
4261 | 6507 | 9.415544 | GATACCATATTGAATTCATGCTTTTCC | 57.584 | 33.333 | 9.40 | 0.00 | 0.00 | 3.13 |
4262 | 6508 | 6.275335 | ACCATATTGAATTCATGCTTTTCCG | 58.725 | 36.000 | 9.40 | 0.00 | 0.00 | 4.30 |
4263 | 6509 | 5.176223 | CCATATTGAATTCATGCTTTTCCGC | 59.824 | 40.000 | 9.40 | 0.00 | 0.00 | 5.54 |
4264 | 6510 | 3.657015 | TTGAATTCATGCTTTTCCGCA | 57.343 | 38.095 | 9.40 | 0.00 | 45.10 | 5.69 |
4265 | 6511 | 3.657015 | TGAATTCATGCTTTTCCGCAA | 57.343 | 38.095 | 3.38 | 0.00 | 44.06 | 4.85 |
4266 | 6512 | 3.987547 | TGAATTCATGCTTTTCCGCAAA | 58.012 | 36.364 | 3.38 | 0.00 | 44.06 | 3.68 |
4267 | 6513 | 4.375272 | TGAATTCATGCTTTTCCGCAAAA | 58.625 | 34.783 | 3.38 | 0.00 | 44.06 | 2.44 |
4268 | 6514 | 4.813161 | TGAATTCATGCTTTTCCGCAAAAA | 59.187 | 33.333 | 3.38 | 0.00 | 44.06 | 1.94 |
4269 | 6515 | 4.730600 | ATTCATGCTTTTCCGCAAAAAC | 57.269 | 36.364 | 0.00 | 0.00 | 44.06 | 2.43 |
4270 | 6516 | 3.170791 | TCATGCTTTTCCGCAAAAACA | 57.829 | 38.095 | 0.00 | 0.00 | 44.06 | 2.83 |
4271 | 6517 | 3.525537 | TCATGCTTTTCCGCAAAAACAA | 58.474 | 36.364 | 0.00 | 0.00 | 44.06 | 2.83 |
4272 | 6518 | 3.935203 | TCATGCTTTTCCGCAAAAACAAA | 59.065 | 34.783 | 0.00 | 0.00 | 44.06 | 2.83 |
4273 | 6519 | 3.731274 | TGCTTTTCCGCAAAAACAAAC | 57.269 | 38.095 | 0.00 | 0.00 | 36.89 | 2.93 |
4274 | 6520 | 2.092838 | TGCTTTTCCGCAAAAACAAACG | 59.907 | 40.909 | 0.00 | 0.00 | 36.89 | 3.60 |
4275 | 6521 | 2.345942 | GCTTTTCCGCAAAAACAAACGA | 59.654 | 40.909 | 0.00 | 0.00 | 33.34 | 3.85 |
4276 | 6522 | 3.181529 | GCTTTTCCGCAAAAACAAACGAA | 60.182 | 39.130 | 0.00 | 0.00 | 33.34 | 3.85 |
4277 | 6523 | 4.493382 | GCTTTTCCGCAAAAACAAACGAAT | 60.493 | 37.500 | 0.00 | 0.00 | 33.34 | 3.34 |
4278 | 6524 | 5.532025 | TTTTCCGCAAAAACAAACGAATT | 57.468 | 30.435 | 0.00 | 0.00 | 31.88 | 2.17 |
4279 | 6525 | 4.763594 | TTCCGCAAAAACAAACGAATTC | 57.236 | 36.364 | 0.00 | 0.00 | 0.00 | 2.17 |
4280 | 6526 | 3.770666 | TCCGCAAAAACAAACGAATTCA | 58.229 | 36.364 | 6.22 | 0.00 | 0.00 | 2.57 |
4281 | 6527 | 4.363999 | TCCGCAAAAACAAACGAATTCAT | 58.636 | 34.783 | 6.22 | 0.00 | 0.00 | 2.57 |
4282 | 6528 | 4.208047 | TCCGCAAAAACAAACGAATTCATG | 59.792 | 37.500 | 6.22 | 3.97 | 0.00 | 3.07 |
4283 | 6529 | 3.893709 | CGCAAAAACAAACGAATTCATGC | 59.106 | 39.130 | 6.22 | 1.21 | 0.00 | 4.06 |
4284 | 6530 | 4.317980 | CGCAAAAACAAACGAATTCATGCT | 60.318 | 37.500 | 6.22 | 0.00 | 0.00 | 3.79 |
4285 | 6531 | 5.132576 | GCAAAAACAAACGAATTCATGCTC | 58.867 | 37.500 | 6.22 | 0.00 | 0.00 | 4.26 |
4286 | 6532 | 5.669122 | CAAAAACAAACGAATTCATGCTCC | 58.331 | 37.500 | 6.22 | 0.00 | 0.00 | 4.70 |
4287 | 6533 | 4.582701 | AAACAAACGAATTCATGCTCCA | 57.417 | 36.364 | 6.22 | 0.00 | 0.00 | 3.86 |
4288 | 6534 | 4.582701 | AACAAACGAATTCATGCTCCAA | 57.417 | 36.364 | 6.22 | 0.00 | 0.00 | 3.53 |
4289 | 6535 | 3.900941 | ACAAACGAATTCATGCTCCAAC | 58.099 | 40.909 | 6.22 | 0.00 | 0.00 | 3.77 |
4290 | 6536 | 3.317711 | ACAAACGAATTCATGCTCCAACA | 59.682 | 39.130 | 6.22 | 0.00 | 0.00 | 3.33 |
4291 | 6537 | 4.202101 | ACAAACGAATTCATGCTCCAACAA | 60.202 | 37.500 | 6.22 | 0.00 | 0.00 | 2.83 |
4292 | 6538 | 4.582701 | AACGAATTCATGCTCCAACAAA | 57.417 | 36.364 | 6.22 | 0.00 | 0.00 | 2.83 |
4293 | 6539 | 3.900941 | ACGAATTCATGCTCCAACAAAC | 58.099 | 40.909 | 6.22 | 0.00 | 0.00 | 2.93 |
4294 | 6540 | 3.569701 | ACGAATTCATGCTCCAACAAACT | 59.430 | 39.130 | 6.22 | 0.00 | 0.00 | 2.66 |
4295 | 6541 | 4.161333 | CGAATTCATGCTCCAACAAACTC | 58.839 | 43.478 | 6.22 | 0.00 | 0.00 | 3.01 |
4296 | 6542 | 4.320421 | CGAATTCATGCTCCAACAAACTCA | 60.320 | 41.667 | 6.22 | 0.00 | 0.00 | 3.41 |
4297 | 6543 | 5.620654 | CGAATTCATGCTCCAACAAACTCAT | 60.621 | 40.000 | 6.22 | 0.00 | 0.00 | 2.90 |
4298 | 6544 | 5.733620 | ATTCATGCTCCAACAAACTCATT | 57.266 | 34.783 | 0.00 | 0.00 | 0.00 | 2.57 |
4299 | 6545 | 4.771590 | TCATGCTCCAACAAACTCATTC | 57.228 | 40.909 | 0.00 | 0.00 | 0.00 | 2.67 |
4300 | 6546 | 4.143543 | TCATGCTCCAACAAACTCATTCA | 58.856 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
4301 | 6547 | 4.583907 | TCATGCTCCAACAAACTCATTCAA | 59.416 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
4302 | 6548 | 4.998671 | TGCTCCAACAAACTCATTCAAA | 57.001 | 36.364 | 0.00 | 0.00 | 0.00 | 2.69 |
4303 | 6549 | 5.336150 | TGCTCCAACAAACTCATTCAAAA | 57.664 | 34.783 | 0.00 | 0.00 | 0.00 | 2.44 |
4304 | 6550 | 5.350633 | TGCTCCAACAAACTCATTCAAAAG | 58.649 | 37.500 | 0.00 | 0.00 | 0.00 | 2.27 |
4305 | 6551 | 5.105392 | TGCTCCAACAAACTCATTCAAAAGT | 60.105 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
4306 | 6552 | 5.460091 | GCTCCAACAAACTCATTCAAAAGTC | 59.540 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4307 | 6553 | 5.901552 | TCCAACAAACTCATTCAAAAGTCC | 58.098 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
4308 | 6554 | 4.739716 | CCAACAAACTCATTCAAAAGTCCG | 59.260 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
4309 | 6555 | 4.568152 | ACAAACTCATTCAAAAGTCCGG | 57.432 | 40.909 | 0.00 | 0.00 | 0.00 | 5.14 |
4310 | 6556 | 4.204012 | ACAAACTCATTCAAAAGTCCGGA | 58.796 | 39.130 | 0.00 | 0.00 | 0.00 | 5.14 |
4311 | 6557 | 4.827284 | ACAAACTCATTCAAAAGTCCGGAT | 59.173 | 37.500 | 7.81 | 0.00 | 0.00 | 4.18 |
4312 | 6558 | 5.156355 | CAAACTCATTCAAAAGTCCGGATG | 58.844 | 41.667 | 7.81 | 0.82 | 0.00 | 3.51 |
4313 | 6559 | 4.286297 | ACTCATTCAAAAGTCCGGATGA | 57.714 | 40.909 | 7.81 | 3.95 | 0.00 | 2.92 |
4314 | 6560 | 4.651778 | ACTCATTCAAAAGTCCGGATGAA | 58.348 | 39.130 | 18.04 | 18.04 | 36.35 | 2.57 |
4315 | 6561 | 4.697352 | ACTCATTCAAAAGTCCGGATGAAG | 59.303 | 41.667 | 19.84 | 11.31 | 35.47 | 3.02 |
4316 | 6562 | 4.905429 | TCATTCAAAAGTCCGGATGAAGA | 58.095 | 39.130 | 19.84 | 14.86 | 35.47 | 2.87 |
4317 | 6563 | 4.937620 | TCATTCAAAAGTCCGGATGAAGAG | 59.062 | 41.667 | 19.84 | 15.42 | 35.47 | 2.85 |
4318 | 6564 | 4.617253 | TTCAAAAGTCCGGATGAAGAGA | 57.383 | 40.909 | 7.81 | 0.00 | 0.00 | 3.10 |
4319 | 6565 | 4.193826 | TCAAAAGTCCGGATGAAGAGAG | 57.806 | 45.455 | 7.81 | 0.00 | 0.00 | 3.20 |
4320 | 6566 | 3.055819 | TCAAAAGTCCGGATGAAGAGAGG | 60.056 | 47.826 | 7.81 | 0.00 | 0.00 | 3.69 |
4321 | 6567 | 0.827368 | AAGTCCGGATGAAGAGAGGC | 59.173 | 55.000 | 7.81 | 0.00 | 0.00 | 4.70 |
4322 | 6568 | 1.066587 | GTCCGGATGAAGAGAGGCG | 59.933 | 63.158 | 7.81 | 0.00 | 0.00 | 5.52 |
4323 | 6569 | 2.127869 | TCCGGATGAAGAGAGGCGG | 61.128 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
4324 | 6570 | 2.419198 | CGGATGAAGAGAGGCGGG | 59.581 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
4325 | 6571 | 2.427245 | CGGATGAAGAGAGGCGGGT | 61.427 | 63.158 | 0.00 | 0.00 | 0.00 | 5.28 |
4326 | 6572 | 1.107538 | CGGATGAAGAGAGGCGGGTA | 61.108 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
4327 | 6573 | 1.120530 | GGATGAAGAGAGGCGGGTAA | 58.879 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4328 | 6574 | 1.694696 | GGATGAAGAGAGGCGGGTAAT | 59.305 | 52.381 | 0.00 | 0.00 | 0.00 | 1.89 |
4329 | 6575 | 2.897969 | GGATGAAGAGAGGCGGGTAATA | 59.102 | 50.000 | 0.00 | 0.00 | 0.00 | 0.98 |
4330 | 6576 | 3.515901 | GGATGAAGAGAGGCGGGTAATAT | 59.484 | 47.826 | 0.00 | 0.00 | 0.00 | 1.28 |
4331 | 6577 | 4.710375 | GGATGAAGAGAGGCGGGTAATATA | 59.290 | 45.833 | 0.00 | 0.00 | 0.00 | 0.86 |
4332 | 6578 | 5.394333 | GGATGAAGAGAGGCGGGTAATATAC | 60.394 | 48.000 | 0.00 | 0.00 | 0.00 | 1.47 |
4333 | 6579 | 4.737578 | TGAAGAGAGGCGGGTAATATACT | 58.262 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
4334 | 6580 | 5.145564 | TGAAGAGAGGCGGGTAATATACTT | 58.854 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
4335 | 6581 | 5.243283 | TGAAGAGAGGCGGGTAATATACTTC | 59.757 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4336 | 6582 | 4.737578 | AGAGAGGCGGGTAATATACTTCA | 58.262 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
4337 | 6583 | 5.145564 | AGAGAGGCGGGTAATATACTTCAA | 58.854 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
4338 | 6584 | 5.010820 | AGAGAGGCGGGTAATATACTTCAAC | 59.989 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4339 | 6585 | 4.652421 | AGAGGCGGGTAATATACTTCAACA | 59.348 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
4340 | 6586 | 4.957296 | AGGCGGGTAATATACTTCAACAG | 58.043 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
4341 | 6587 | 4.062991 | GGCGGGTAATATACTTCAACAGG | 58.937 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
4342 | 6588 | 4.443881 | GGCGGGTAATATACTTCAACAGGT | 60.444 | 45.833 | 0.00 | 0.00 | 0.00 | 4.00 |
4352 | 6598 | 9.614792 | AATATACTTCAACAGGTTTCCTATGTC | 57.385 | 33.333 | 0.00 | 0.00 | 29.64 | 3.06 |
4355 | 6603 | 4.819105 | TCAACAGGTTTCCTATGTCGAT | 57.181 | 40.909 | 0.00 | 0.00 | 29.64 | 3.59 |
4418 | 6671 | 9.288576 | TGATGTCTGTCTTTCAGTTTTATCAAT | 57.711 | 29.630 | 0.00 | 0.00 | 43.97 | 2.57 |
4424 | 6677 | 9.390795 | CTGTCTTTCAGTTTTATCAATTGTCAG | 57.609 | 33.333 | 5.13 | 0.00 | 39.17 | 3.51 |
4451 | 6706 | 7.654022 | TTTTCATTTCCTTTGTGTCTTAGGT | 57.346 | 32.000 | 0.00 | 0.00 | 0.00 | 3.08 |
4490 | 6749 | 6.074648 | TGGAAAACCATAGGAACATTGTTCT | 58.925 | 36.000 | 24.60 | 15.04 | 0.00 | 3.01 |
4518 | 6777 | 4.982295 | GGAAAATTTCCTGTCGTTTGGAAG | 59.018 | 41.667 | 17.01 | 0.00 | 46.57 | 3.46 |
4562 | 6822 | 2.866762 | CGAAGGACAGAATCGATTTCCC | 59.133 | 50.000 | 19.29 | 14.24 | 38.82 | 3.97 |
4599 | 6859 | 3.694043 | TTCACAGGATTCCGAACATCA | 57.306 | 42.857 | 0.00 | 0.00 | 0.00 | 3.07 |
4652 | 6915 | 4.694233 | ACCGAGGCACTGCAGCTG | 62.694 | 66.667 | 15.27 | 10.11 | 41.55 | 4.24 |
4673 | 6938 | 0.951558 | AACAACCGCTCGAGCAAAAT | 59.048 | 45.000 | 34.69 | 16.20 | 42.21 | 1.82 |
4716 | 6981 | 0.107508 | ACCGTGCATGGAGAAGATGG | 60.108 | 55.000 | 31.74 | 1.37 | 0.00 | 3.51 |
4717 | 6982 | 0.178767 | CCGTGCATGGAGAAGATGGA | 59.821 | 55.000 | 21.08 | 0.00 | 0.00 | 3.41 |
4719 | 6984 | 1.307097 | GTGCATGGAGAAGATGGAGC | 58.693 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
4727 | 6992 | 1.691434 | GAGAAGATGGAGCTGGGGTAG | 59.309 | 57.143 | 0.00 | 0.00 | 0.00 | 3.18 |
4759 | 7024 | 1.780309 | TGGTGGAGAAAGGGTGATTGT | 59.220 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
4785 | 7106 | 4.836125 | TGTTCTTTGGCAAGATTCAGTC | 57.164 | 40.909 | 0.00 | 0.00 | 38.89 | 3.51 |
4791 | 7112 | 0.807496 | GGCAAGATTCAGTCACAGGC | 59.193 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4819 | 7140 | 0.394216 | AGGCTGTGTTTGACTGTGCA | 60.394 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
4886 | 7207 | 7.126726 | CATACTTGCAGTATTTCCTATGCTC | 57.873 | 40.000 | 6.20 | 0.00 | 39.26 | 4.26 |
4908 | 7229 | 6.621596 | GCTCTCAATTCTTATCTTTTGCACGT | 60.622 | 38.462 | 0.00 | 0.00 | 0.00 | 4.49 |
4926 | 7247 | 5.163499 | TGCACGTTGTTTTCCTTTCCTATTT | 60.163 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4946 | 7269 | 7.937394 | CCTATTTCTGTATTTTTCCTATCCCGT | 59.063 | 37.037 | 0.00 | 0.00 | 0.00 | 5.28 |
5019 | 7342 | 8.288689 | ACTATCTAGAGTGTCTCTTTCCTTTC | 57.711 | 38.462 | 4.60 | 0.00 | 41.50 | 2.62 |
5032 | 7360 | 8.023706 | GTCTCTTTCCTTTCCATTGTGATAAAC | 58.976 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
5065 | 7393 | 0.454285 | GTGTGTGTGTGTGTGTGTGC | 60.454 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
5066 | 7394 | 1.136565 | GTGTGTGTGTGTGTGTGCC | 59.863 | 57.895 | 0.00 | 0.00 | 0.00 | 5.01 |
5068 | 7396 | 0.250513 | TGTGTGTGTGTGTGTGCCTA | 59.749 | 50.000 | 0.00 | 0.00 | 0.00 | 3.93 |
5070 | 7398 | 1.946768 | GTGTGTGTGTGTGTGCCTATT | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 1.73 |
5071 | 7399 | 3.135225 | GTGTGTGTGTGTGTGCCTATTA | 58.865 | 45.455 | 0.00 | 0.00 | 0.00 | 0.98 |
5072 | 7400 | 3.562141 | GTGTGTGTGTGTGTGCCTATTAA | 59.438 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
5073 | 7401 | 4.035792 | GTGTGTGTGTGTGTGCCTATTAAA | 59.964 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
5074 | 7402 | 4.640647 | TGTGTGTGTGTGTGCCTATTAAAA | 59.359 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
5076 | 7404 | 6.183360 | TGTGTGTGTGTGTGCCTATTAAAATT | 60.183 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
5077 | 7405 | 6.143758 | GTGTGTGTGTGTGCCTATTAAAATTG | 59.856 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
5078 | 7406 | 6.183360 | TGTGTGTGTGTGCCTATTAAAATTGT | 60.183 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
5079 | 7407 | 6.143758 | GTGTGTGTGTGCCTATTAAAATTGTG | 59.856 | 38.462 | 0.00 | 0.00 | 0.00 | 3.33 |
5080 | 7408 | 6.039829 | TGTGTGTGTGCCTATTAAAATTGTGA | 59.960 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
5082 | 7410 | 8.240682 | GTGTGTGTGCCTATTAAAATTGTGATA | 58.759 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
5083 | 7411 | 8.797438 | TGTGTGTGCCTATTAAAATTGTGATAA | 58.203 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
5085 | 7413 | 7.973388 | TGTGTGCCTATTAAAATTGTGATAAGC | 59.027 | 33.333 | 0.00 | 0.00 | 0.00 | 3.09 |
5086 | 7414 | 7.973388 | GTGTGCCTATTAAAATTGTGATAAGCA | 59.027 | 33.333 | 0.65 | 0.65 | 0.00 | 3.91 |
5088 | 7416 | 9.533253 | GTGCCTATTAAAATTGTGATAAGCAAT | 57.467 | 29.630 | 5.50 | 0.00 | 38.09 | 3.56 |
5097 | 7425 | 6.705863 | ATTGTGATAAGCAATCTCCTTTCC | 57.294 | 37.500 | 1.38 | 0.00 | 35.45 | 3.13 |
5098 | 7426 | 4.191544 | TGTGATAAGCAATCTCCTTTCCG | 58.808 | 43.478 | 1.38 | 0.00 | 35.45 | 4.30 |
5136 | 8212 | 3.009723 | ACAACGTGCTAATAGCTGCATT | 58.990 | 40.909 | 13.88 | 2.62 | 42.97 | 3.56 |
5142 | 8218 | 4.084328 | CGTGCTAATAGCTGCATTTCTACC | 60.084 | 45.833 | 13.88 | 0.00 | 42.97 | 3.18 |
5533 | 9145 | 2.268920 | GCGCTGAGGTCCATTGGA | 59.731 | 61.111 | 0.00 | 0.00 | 0.00 | 3.53 |
5570 | 9191 | 2.558313 | GCAAGCCTCTCAACGTGC | 59.442 | 61.111 | 0.00 | 0.00 | 34.30 | 5.34 |
5588 | 9209 | 3.002583 | TGATCACCGCTGCCTCCA | 61.003 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
5824 | 12406 | 2.356313 | CCGTTGCTGAGTGACGCT | 60.356 | 61.111 | 4.61 | 0.00 | 35.60 | 5.07 |
5827 | 12409 | 1.300931 | GTTGCTGAGTGACGCTGGA | 60.301 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
5858 | 12443 | 1.909302 | ACATCACCCCGAACTTCTCAT | 59.091 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
5863 | 12448 | 2.434336 | CACCCCGAACTTCTCATCCATA | 59.566 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
5938 | 12523 | 1.330521 | GTGCTCTTGTCGCTCAACAAA | 59.669 | 47.619 | 0.00 | 0.00 | 38.60 | 2.83 |
6043 | 12628 | 2.282040 | AAGGTGTGGCAGAGCAGC | 60.282 | 61.111 | 16.48 | 7.12 | 0.00 | 5.25 |
6114 | 12709 | 5.602458 | TCGTCGTCGATGCTATTATTACT | 57.398 | 39.130 | 9.67 | 0.00 | 41.35 | 2.24 |
6615 | 13217 | 4.367023 | GCACCCGCCACAGTACGA | 62.367 | 66.667 | 0.00 | 0.00 | 0.00 | 3.43 |
6643 | 13245 | 0.604780 | CTACACAGTTGCAGCAGCCT | 60.605 | 55.000 | 5.49 | 0.00 | 41.13 | 4.58 |
6787 | 13389 | 2.758089 | GCAGCAGCTCAACGGATGG | 61.758 | 63.158 | 0.00 | 0.00 | 37.91 | 3.51 |
6855 | 13457 | 0.179062 | ACAGCCGAAGATGAGATGGC | 60.179 | 55.000 | 0.00 | 0.00 | 46.07 | 4.40 |
6919 | 13521 | 1.880894 | CTGCCTCCACAATGTGCTG | 59.119 | 57.895 | 8.05 | 2.50 | 31.34 | 4.41 |
6920 | 13522 | 0.892358 | CTGCCTCCACAATGTGCTGT | 60.892 | 55.000 | 8.05 | 0.00 | 31.34 | 4.40 |
7003 | 13605 | 1.897641 | CGACTTGGAGCGTAGTTCTC | 58.102 | 55.000 | 0.00 | 0.00 | 38.04 | 2.87 |
7022 | 13624 | 2.233922 | CTCCCAGACAAAGTCGGTGTAT | 59.766 | 50.000 | 0.00 | 0.00 | 37.67 | 2.29 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
328 | 329 | 0.400594 | TCTCTCTGTCTCCGTCCACA | 59.599 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
373 | 422 | 0.032515 | TAATCTGTCTCCCCGCTCCA | 60.033 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
644 | 694 | 3.020984 | CCTCTAGGAGACGCTTCTCTTT | 58.979 | 50.000 | 18.61 | 10.62 | 46.80 | 2.52 |
659 | 709 | 2.306847 | GCTCAACCTCTCTCCCTCTAG | 58.693 | 57.143 | 0.00 | 0.00 | 0.00 | 2.43 |
660 | 710 | 1.408961 | CGCTCAACCTCTCTCCCTCTA | 60.409 | 57.143 | 0.00 | 0.00 | 0.00 | 2.43 |
661 | 711 | 0.682855 | CGCTCAACCTCTCTCCCTCT | 60.683 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
664 | 714 | 1.950973 | GACCGCTCAACCTCTCTCCC | 61.951 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
699 | 749 | 3.746492 | GCGTGACCACTCAACTTTATCTT | 59.254 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
700 | 750 | 3.326747 | GCGTGACCACTCAACTTTATCT | 58.673 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
706 | 756 | 2.029073 | CCGCGTGACCACTCAACT | 59.971 | 61.111 | 4.92 | 0.00 | 0.00 | 3.16 |
755 | 805 | 4.607606 | CGCACCGCTCGATCGCTA | 62.608 | 66.667 | 11.09 | 0.00 | 0.00 | 4.26 |
821 | 871 | 3.496331 | GAATCCTGGGTTTGACTTTGGA | 58.504 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
867 | 918 | 0.617413 | CCTGTGTCTGGGCTGAGATT | 59.383 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
997 | 1170 | 0.536460 | GTCGTTGGGGTGGTCATGTT | 60.536 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
998 | 1171 | 1.072505 | GTCGTTGGGGTGGTCATGT | 59.927 | 57.895 | 0.00 | 0.00 | 0.00 | 3.21 |
1067 | 1243 | 0.618458 | AATTACCTTGAGGCTGGCGA | 59.382 | 50.000 | 0.00 | 0.00 | 39.32 | 5.54 |
1142 | 1321 | 1.043022 | CACAAGCTTTGGCCCTCTTT | 58.957 | 50.000 | 0.00 | 0.00 | 39.73 | 2.52 |
1152 | 1331 | 3.019564 | ACAGAGCAAACTCACAAGCTTT | 58.980 | 40.909 | 0.00 | 0.00 | 46.09 | 3.51 |
1184 | 1411 | 2.180769 | CAACCTCGATCGCCGACA | 59.819 | 61.111 | 11.09 | 0.00 | 43.23 | 4.35 |
1233 | 1461 | 5.717119 | AATAGGCAGTGAATTAGGAGGTT | 57.283 | 39.130 | 0.00 | 0.00 | 0.00 | 3.50 |
1270 | 1498 | 7.041235 | CGTTTAGATCACTAAGGTAGGGAGTAG | 60.041 | 44.444 | 0.00 | 0.00 | 42.39 | 2.57 |
1273 | 1501 | 5.593502 | ACGTTTAGATCACTAAGGTAGGGAG | 59.406 | 44.000 | 0.00 | 0.00 | 42.39 | 4.30 |
1274 | 1502 | 5.513233 | ACGTTTAGATCACTAAGGTAGGGA | 58.487 | 41.667 | 0.00 | 0.00 | 43.46 | 4.20 |
1275 | 1503 | 5.848833 | ACGTTTAGATCACTAAGGTAGGG | 57.151 | 43.478 | 0.00 | 0.00 | 39.36 | 3.53 |
1276 | 1504 | 7.098074 | AGAACGTTTAGATCACTAAGGTAGG | 57.902 | 40.000 | 0.46 | 0.00 | 39.36 | 3.18 |
1324 | 1552 | 9.226606 | CCAGGAAACAACTAACATAGATTGTAA | 57.773 | 33.333 | 0.00 | 0.00 | 37.68 | 2.41 |
1325 | 1553 | 7.827236 | CCCAGGAAACAACTAACATAGATTGTA | 59.173 | 37.037 | 0.00 | 0.00 | 37.68 | 2.41 |
1326 | 1554 | 6.659242 | CCCAGGAAACAACTAACATAGATTGT | 59.341 | 38.462 | 0.00 | 0.00 | 41.53 | 2.71 |
1327 | 1555 | 6.404734 | GCCCAGGAAACAACTAACATAGATTG | 60.405 | 42.308 | 0.00 | 0.00 | 0.00 | 2.67 |
1328 | 1556 | 5.652452 | GCCCAGGAAACAACTAACATAGATT | 59.348 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
1329 | 1557 | 5.193679 | GCCCAGGAAACAACTAACATAGAT | 58.806 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
1357 | 1585 | 5.483811 | GGTTTTGAAAAACTCCACCAAGAA | 58.516 | 37.500 | 16.03 | 0.00 | 45.70 | 2.52 |
1358 | 1586 | 4.381079 | CGGTTTTGAAAAACTCCACCAAGA | 60.381 | 41.667 | 16.03 | 0.00 | 45.70 | 3.02 |
1433 | 1668 | 2.812011 | ACAGTTTTCCATTACGAGGTGC | 59.188 | 45.455 | 0.00 | 0.00 | 0.00 | 5.01 |
1453 | 1730 | 1.084289 | GGGCAACGTCATACTGGAAC | 58.916 | 55.000 | 0.00 | 0.00 | 37.60 | 3.62 |
1455 | 1732 | 0.687920 | TTGGGCAACGTCATACTGGA | 59.312 | 50.000 | 0.00 | 0.00 | 37.60 | 3.86 |
1458 | 1735 | 3.686016 | AGAAATTGGGCAACGTCATACT | 58.314 | 40.909 | 0.00 | 0.00 | 37.60 | 2.12 |
1465 | 1742 | 1.147473 | GGCAAAGAAATTGGGCAACG | 58.853 | 50.000 | 0.00 | 0.00 | 39.54 | 4.10 |
1670 | 1949 | 1.689273 | GCACCTCGAGGACTCCATAAT | 59.311 | 52.381 | 37.69 | 9.21 | 38.94 | 1.28 |
1751 | 2031 | 2.806288 | GTCAAATGTCGATTGACCGG | 57.194 | 50.000 | 16.18 | 0.00 | 46.94 | 5.28 |
1756 | 2036 | 4.612614 | CACCTTTTCGTCAAATGTCGATTG | 59.387 | 41.667 | 3.78 | 0.00 | 35.75 | 2.67 |
1785 | 2065 | 7.554118 | CCCTATGCAAAAGAGAACAAGAATCTA | 59.446 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
1916 | 2198 | 2.307496 | TCACATGGTTTGGAAGGCAT | 57.693 | 45.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1917 | 2199 | 2.170166 | GATCACATGGTTTGGAAGGCA | 58.830 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
1958 | 2242 | 2.350498 | GCTTACTCCGCGCAATTTCTAA | 59.650 | 45.455 | 8.75 | 0.00 | 0.00 | 2.10 |
2017 | 2319 | 2.685897 | ACGCAGAGGATGAGAGTACTTC | 59.314 | 50.000 | 0.00 | 0.00 | 32.27 | 3.01 |
2023 | 2325 | 0.248990 | GAGCACGCAGAGGATGAGAG | 60.249 | 60.000 | 0.00 | 0.00 | 32.27 | 3.20 |
2038 | 2340 | 3.300388 | AGGATGAGATTACTTCGGAGCA | 58.700 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
2039 | 2341 | 3.572255 | AGAGGATGAGATTACTTCGGAGC | 59.428 | 47.826 | 0.00 | 0.00 | 0.00 | 4.70 |
2040 | 2342 | 4.558496 | GCAGAGGATGAGATTACTTCGGAG | 60.558 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2041 | 2343 | 3.319405 | GCAGAGGATGAGATTACTTCGGA | 59.681 | 47.826 | 0.00 | 0.00 | 0.00 | 4.55 |
2042 | 2344 | 3.648009 | GCAGAGGATGAGATTACTTCGG | 58.352 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2043 | 2345 | 3.243234 | ACGCAGAGGATGAGATTACTTCG | 60.243 | 47.826 | 0.00 | 0.00 | 32.27 | 3.79 |
2044 | 2346 | 4.047822 | CACGCAGAGGATGAGATTACTTC | 58.952 | 47.826 | 0.00 | 0.00 | 32.27 | 3.01 |
2045 | 2347 | 3.739519 | GCACGCAGAGGATGAGATTACTT | 60.740 | 47.826 | 0.00 | 0.00 | 32.27 | 2.24 |
2046 | 2348 | 2.223923 | GCACGCAGAGGATGAGATTACT | 60.224 | 50.000 | 0.00 | 0.00 | 32.27 | 2.24 |
2047 | 2349 | 2.131183 | GCACGCAGAGGATGAGATTAC | 58.869 | 52.381 | 0.00 | 0.00 | 32.27 | 1.89 |
2048 | 2350 | 2.034878 | AGCACGCAGAGGATGAGATTA | 58.965 | 47.619 | 0.00 | 0.00 | 32.27 | 1.75 |
2049 | 2351 | 0.829333 | AGCACGCAGAGGATGAGATT | 59.171 | 50.000 | 0.00 | 0.00 | 32.27 | 2.40 |
2050 | 2352 | 0.388659 | GAGCACGCAGAGGATGAGAT | 59.611 | 55.000 | 0.00 | 0.00 | 32.27 | 2.75 |
2051 | 2353 | 1.670949 | GGAGCACGCAGAGGATGAGA | 61.671 | 60.000 | 0.00 | 0.00 | 32.27 | 3.27 |
2052 | 2354 | 1.227205 | GGAGCACGCAGAGGATGAG | 60.227 | 63.158 | 0.00 | 0.00 | 34.41 | 2.90 |
2053 | 2355 | 1.670949 | GAGGAGCACGCAGAGGATGA | 61.671 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2054 | 2356 | 1.227205 | GAGGAGCACGCAGAGGATG | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
2055 | 2357 | 1.260538 | TTGAGGAGCACGCAGAGGAT | 61.261 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
2056 | 2358 | 1.881903 | CTTGAGGAGCACGCAGAGGA | 61.882 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2057 | 2359 | 1.447489 | CTTGAGGAGCACGCAGAGG | 60.447 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
2058 | 2360 | 4.182132 | CTTGAGGAGCACGCAGAG | 57.818 | 61.111 | 0.00 | 0.00 | 0.00 | 3.35 |
2079 | 2381 | 8.414629 | AACTTTGGCTTCTAATCTCAGATTTT | 57.585 | 30.769 | 4.90 | 0.00 | 0.00 | 1.82 |
2145 | 2447 | 6.189859 | AGCCTGGATCAACAAAATCAAGATA | 58.810 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2208 | 2512 | 1.938577 | CTCATCCACGAGGCTTTCATG | 59.061 | 52.381 | 0.00 | 0.00 | 33.74 | 3.07 |
2212 | 2516 | 0.539051 | CCTCTCATCCACGAGGCTTT | 59.461 | 55.000 | 0.00 | 0.00 | 40.27 | 3.51 |
2298 | 2602 | 2.688446 | CTCCGCTACTATCACTGTTGGA | 59.312 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2315 | 2620 | 3.242739 | CCGTGATTTCTTTTATGCCTCCG | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
2426 | 2737 | 1.402259 | TCAACACGGTCAAATTTGCGT | 59.598 | 42.857 | 13.54 | 14.56 | 0.00 | 5.24 |
2468 | 2779 | 4.371624 | TTGCTAATATGCTGCCCATACT | 57.628 | 40.909 | 0.00 | 0.00 | 39.14 | 2.12 |
2477 | 2788 | 7.772292 | TGTTCTTCTTCTGATTGCTAATATGCT | 59.228 | 33.333 | 0.00 | 0.00 | 0.00 | 3.79 |
2557 | 2868 | 0.761187 | TGACAAAGTGCTGCTCTCCT | 59.239 | 50.000 | 4.52 | 0.00 | 0.00 | 3.69 |
2559 | 2870 | 2.067766 | CTCTGACAAAGTGCTGCTCTC | 58.932 | 52.381 | 4.52 | 0.00 | 0.00 | 3.20 |
2577 | 2888 | 5.755375 | TCTTTCTGTCCGCATGATTAATCTC | 59.245 | 40.000 | 16.24 | 5.22 | 0.00 | 2.75 |
2619 | 2930 | 2.861935 | GTCGACCTTTCAAAGTCAACGA | 59.138 | 45.455 | 3.51 | 0.00 | 0.00 | 3.85 |
2620 | 2931 | 2.347292 | CGTCGACCTTTCAAAGTCAACG | 60.347 | 50.000 | 10.58 | 0.00 | 0.00 | 4.10 |
2768 | 3090 | 1.944024 | AGACAAACCGAATGAAACGCA | 59.056 | 42.857 | 0.00 | 0.00 | 0.00 | 5.24 |
2810 | 3132 | 4.311599 | CGAAAAAGACAAAAACAACACGC | 58.688 | 39.130 | 0.00 | 0.00 | 0.00 | 5.34 |
2873 | 3205 | 1.611491 | CCACGTGGCAGGTTATTTTGT | 59.389 | 47.619 | 24.02 | 0.00 | 0.00 | 2.83 |
2929 | 3266 | 4.210537 | AGTCAACTGCATGTAAACACGTAC | 59.789 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
2932 | 3269 | 3.878086 | AGTCAACTGCATGTAAACACG | 57.122 | 42.857 | 0.00 | 0.00 | 0.00 | 4.49 |
3053 | 3806 | 4.996788 | TCTTAACTAGTCCTAAAGCCGG | 57.003 | 45.455 | 0.00 | 0.00 | 0.00 | 6.13 |
3078 | 3831 | 9.341899 | GCAACCTATTTAACTAATTTCACTGTG | 57.658 | 33.333 | 0.17 | 0.17 | 0.00 | 3.66 |
3105 | 3858 | 0.696501 | GGACCCAACACCAGGTATGT | 59.303 | 55.000 | 0.00 | 0.00 | 36.17 | 2.29 |
3123 | 3876 | 6.918022 | GGTATTATTCAATGCTTTTTCCGAGG | 59.082 | 38.462 | 0.00 | 0.00 | 0.00 | 4.63 |
3261 | 4177 | 5.221843 | CGAATATTTTGGGGATCCAGGAGTA | 60.222 | 44.000 | 15.23 | 0.00 | 45.04 | 2.59 |
3377 | 4302 | 9.268282 | TGATTAACTCTTACCTTCTTACCTCAT | 57.732 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
3405 | 4330 | 7.865707 | AGTCGTTGATCTCATTAATTAATGGC | 58.134 | 34.615 | 29.22 | 19.31 | 42.46 | 4.40 |
3455 | 4380 | 6.936900 | CCTCTTACCTTCTCTTTTCACATGAA | 59.063 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
3459 | 4384 | 4.905456 | TCCCTCTTACCTTCTCTTTTCACA | 59.095 | 41.667 | 0.00 | 0.00 | 0.00 | 3.58 |
3473 | 4398 | 2.703007 | ACTCAGGCATGATCCCTCTTAC | 59.297 | 50.000 | 0.00 | 0.00 | 34.12 | 2.34 |
3554 | 4479 | 6.672593 | TCAATATTTGGATTTAGAGGTGCCT | 58.327 | 36.000 | 0.00 | 0.00 | 0.00 | 4.75 |
3582 | 4507 | 1.672881 | GCTCACACAACTGACTTGCTT | 59.327 | 47.619 | 0.00 | 0.00 | 32.41 | 3.91 |
3658 | 5882 | 1.576356 | CAGGCAAATCTCTCTACGCC | 58.424 | 55.000 | 0.00 | 0.00 | 39.90 | 5.68 |
3785 | 6018 | 8.621286 | CAGAATCACATGGTTATAGGTTTTACC | 58.379 | 37.037 | 0.00 | 0.00 | 38.99 | 2.85 |
3871 | 6109 | 1.925229 | GCAGCTTGCAGTTTCAACAA | 58.075 | 45.000 | 3.64 | 0.00 | 44.26 | 2.83 |
3949 | 6187 | 4.536489 | ACCTGGAATAAAAGGCAGTCTACT | 59.464 | 41.667 | 0.00 | 0.00 | 37.03 | 2.57 |
3978 | 6224 | 2.847327 | AGTGACAATGTGACTGAGGG | 57.153 | 50.000 | 4.37 | 0.00 | 27.24 | 4.30 |
3988 | 6234 | 2.156917 | AGCATCCACACAGTGACAATG | 58.843 | 47.619 | 7.81 | 0.41 | 35.23 | 2.82 |
3990 | 6236 | 2.871637 | GCTAGCATCCACACAGTGACAA | 60.872 | 50.000 | 10.63 | 0.00 | 35.23 | 3.18 |
4040 | 6286 | 7.028962 | TGAAGCATGAATTCAATAAAACCTCG | 58.971 | 34.615 | 13.09 | 0.00 | 33.85 | 4.63 |
4048 | 6294 | 5.419788 | AGTTGGCTGAAGCATGAATTCAATA | 59.580 | 36.000 | 13.09 | 0.00 | 44.36 | 1.90 |
4049 | 6295 | 4.222145 | AGTTGGCTGAAGCATGAATTCAAT | 59.778 | 37.500 | 13.09 | 0.00 | 44.36 | 2.57 |
4051 | 6297 | 3.159472 | AGTTGGCTGAAGCATGAATTCA | 58.841 | 40.909 | 11.26 | 11.26 | 44.36 | 2.57 |
4052 | 6298 | 3.192001 | TGAGTTGGCTGAAGCATGAATTC | 59.808 | 43.478 | 4.43 | 0.00 | 44.36 | 2.17 |
4053 | 6299 | 3.159472 | TGAGTTGGCTGAAGCATGAATT | 58.841 | 40.909 | 4.43 | 0.00 | 44.36 | 2.17 |
4054 | 6300 | 2.799017 | TGAGTTGGCTGAAGCATGAAT | 58.201 | 42.857 | 4.43 | 0.00 | 44.36 | 2.57 |
4055 | 6301 | 2.275134 | TGAGTTGGCTGAAGCATGAA | 57.725 | 45.000 | 4.43 | 0.00 | 44.36 | 2.57 |
4056 | 6302 | 2.502142 | ATGAGTTGGCTGAAGCATGA | 57.498 | 45.000 | 4.43 | 0.00 | 44.36 | 3.07 |
4057 | 6303 | 2.490509 | TGAATGAGTTGGCTGAAGCATG | 59.509 | 45.455 | 4.43 | 0.00 | 44.36 | 4.06 |
4058 | 6304 | 2.799017 | TGAATGAGTTGGCTGAAGCAT | 58.201 | 42.857 | 4.43 | 0.00 | 44.36 | 3.79 |
4059 | 6305 | 2.275134 | TGAATGAGTTGGCTGAAGCA | 57.725 | 45.000 | 4.43 | 0.00 | 44.36 | 3.91 |
4060 | 6306 | 3.648339 | TTTGAATGAGTTGGCTGAAGC | 57.352 | 42.857 | 0.00 | 0.00 | 41.14 | 3.86 |
4061 | 6307 | 5.192327 | ACTTTTGAATGAGTTGGCTGAAG | 57.808 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
4062 | 6308 | 4.037923 | GGACTTTTGAATGAGTTGGCTGAA | 59.962 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
4063 | 6309 | 3.569701 | GGACTTTTGAATGAGTTGGCTGA | 59.430 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
4064 | 6310 | 3.318839 | TGGACTTTTGAATGAGTTGGCTG | 59.681 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
4065 | 6311 | 3.565307 | TGGACTTTTGAATGAGTTGGCT | 58.435 | 40.909 | 0.00 | 0.00 | 0.00 | 4.75 |
4066 | 6312 | 4.320608 | TTGGACTTTTGAATGAGTTGGC | 57.679 | 40.909 | 0.00 | 0.00 | 0.00 | 4.52 |
4067 | 6313 | 5.750067 | CAGTTTGGACTTTTGAATGAGTTGG | 59.250 | 40.000 | 0.00 | 0.00 | 32.54 | 3.77 |
4068 | 6314 | 6.563422 | TCAGTTTGGACTTTTGAATGAGTTG | 58.437 | 36.000 | 0.00 | 0.00 | 32.54 | 3.16 |
4069 | 6315 | 6.773976 | TCAGTTTGGACTTTTGAATGAGTT | 57.226 | 33.333 | 0.00 | 0.00 | 32.54 | 3.01 |
4070 | 6316 | 6.239120 | CCATCAGTTTGGACTTTTGAATGAGT | 60.239 | 38.462 | 0.00 | 0.00 | 39.25 | 3.41 |
4071 | 6317 | 6.016024 | TCCATCAGTTTGGACTTTTGAATGAG | 60.016 | 38.462 | 0.00 | 0.00 | 40.90 | 2.90 |
4072 | 6318 | 5.832595 | TCCATCAGTTTGGACTTTTGAATGA | 59.167 | 36.000 | 0.00 | 0.00 | 40.90 | 2.57 |
4073 | 6319 | 6.016024 | TCTCCATCAGTTTGGACTTTTGAATG | 60.016 | 38.462 | 0.00 | 0.00 | 40.90 | 2.67 |
4074 | 6320 | 6.070656 | TCTCCATCAGTTTGGACTTTTGAAT | 58.929 | 36.000 | 0.00 | 0.00 | 40.90 | 2.57 |
4075 | 6321 | 5.445069 | TCTCCATCAGTTTGGACTTTTGAA | 58.555 | 37.500 | 0.00 | 0.00 | 40.90 | 2.69 |
4076 | 6322 | 5.047566 | TCTCCATCAGTTTGGACTTTTGA | 57.952 | 39.130 | 0.00 | 0.00 | 40.90 | 2.69 |
4077 | 6323 | 5.065914 | TCTCTCCATCAGTTTGGACTTTTG | 58.934 | 41.667 | 0.00 | 0.00 | 40.90 | 2.44 |
4078 | 6324 | 5.310409 | TCTCTCCATCAGTTTGGACTTTT | 57.690 | 39.130 | 0.00 | 0.00 | 40.90 | 2.27 |
4079 | 6325 | 4.263243 | CCTCTCTCCATCAGTTTGGACTTT | 60.263 | 45.833 | 0.00 | 0.00 | 40.90 | 2.66 |
4080 | 6326 | 3.262915 | CCTCTCTCCATCAGTTTGGACTT | 59.737 | 47.826 | 0.00 | 0.00 | 40.90 | 3.01 |
4081 | 6327 | 2.836981 | CCTCTCTCCATCAGTTTGGACT | 59.163 | 50.000 | 0.00 | 0.00 | 40.90 | 3.85 |
4082 | 6328 | 2.679349 | GCCTCTCTCCATCAGTTTGGAC | 60.679 | 54.545 | 0.00 | 0.00 | 40.90 | 4.02 |
4083 | 6329 | 1.556911 | GCCTCTCTCCATCAGTTTGGA | 59.443 | 52.381 | 0.00 | 0.00 | 43.56 | 3.53 |
4084 | 6330 | 1.741732 | CGCCTCTCTCCATCAGTTTGG | 60.742 | 57.143 | 0.00 | 0.00 | 38.18 | 3.28 |
4085 | 6331 | 1.649664 | CGCCTCTCTCCATCAGTTTG | 58.350 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
4086 | 6332 | 0.539051 | CCGCCTCTCTCCATCAGTTT | 59.461 | 55.000 | 0.00 | 0.00 | 0.00 | 2.66 |
4087 | 6333 | 0.324738 | TCCGCCTCTCTCCATCAGTT | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4088 | 6334 | 1.040339 | GTCCGCCTCTCTCCATCAGT | 61.040 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4089 | 6335 | 1.039785 | TGTCCGCCTCTCTCCATCAG | 61.040 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
4090 | 6336 | 0.614697 | TTGTCCGCCTCTCTCCATCA | 60.615 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 |
4091 | 6337 | 0.755686 | ATTGTCCGCCTCTCTCCATC | 59.244 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4092 | 6338 | 2.088104 | TATTGTCCGCCTCTCTCCAT | 57.912 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4093 | 6339 | 2.088104 | ATATTGTCCGCCTCTCTCCA | 57.912 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4094 | 6340 | 3.158676 | AGTATATTGTCCGCCTCTCTCC | 58.841 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
4095 | 6341 | 4.278669 | TGAAGTATATTGTCCGCCTCTCTC | 59.721 | 45.833 | 0.00 | 0.00 | 0.00 | 3.20 |
4096 | 6342 | 4.215908 | TGAAGTATATTGTCCGCCTCTCT | 58.784 | 43.478 | 0.00 | 0.00 | 0.00 | 3.10 |
4097 | 6343 | 4.585955 | TGAAGTATATTGTCCGCCTCTC | 57.414 | 45.455 | 0.00 | 0.00 | 0.00 | 3.20 |
4098 | 6344 | 4.161565 | TGTTGAAGTATATTGTCCGCCTCT | 59.838 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
4099 | 6345 | 4.270325 | GTGTTGAAGTATATTGTCCGCCTC | 59.730 | 45.833 | 0.00 | 0.00 | 0.00 | 4.70 |
4100 | 6346 | 4.189231 | GTGTTGAAGTATATTGTCCGCCT | 58.811 | 43.478 | 0.00 | 0.00 | 0.00 | 5.52 |
4101 | 6347 | 3.311596 | GGTGTTGAAGTATATTGTCCGCC | 59.688 | 47.826 | 0.00 | 0.00 | 0.00 | 6.13 |
4102 | 6348 | 3.311596 | GGGTGTTGAAGTATATTGTCCGC | 59.688 | 47.826 | 0.00 | 0.00 | 0.00 | 5.54 |
4103 | 6349 | 3.875134 | GGGGTGTTGAAGTATATTGTCCG | 59.125 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
4104 | 6350 | 4.079958 | AGGGGGTGTTGAAGTATATTGTCC | 60.080 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
4105 | 6351 | 4.881850 | CAGGGGGTGTTGAAGTATATTGTC | 59.118 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
4106 | 6352 | 4.538490 | TCAGGGGGTGTTGAAGTATATTGT | 59.462 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
4107 | 6353 | 4.881850 | GTCAGGGGGTGTTGAAGTATATTG | 59.118 | 45.833 | 0.00 | 0.00 | 0.00 | 1.90 |
4108 | 6354 | 4.383770 | CGTCAGGGGGTGTTGAAGTATATT | 60.384 | 45.833 | 0.00 | 0.00 | 0.00 | 1.28 |
4109 | 6355 | 3.134081 | CGTCAGGGGGTGTTGAAGTATAT | 59.866 | 47.826 | 0.00 | 0.00 | 0.00 | 0.86 |
4110 | 6356 | 2.498481 | CGTCAGGGGGTGTTGAAGTATA | 59.502 | 50.000 | 0.00 | 0.00 | 0.00 | 1.47 |
4111 | 6357 | 1.278127 | CGTCAGGGGGTGTTGAAGTAT | 59.722 | 52.381 | 0.00 | 0.00 | 0.00 | 2.12 |
4112 | 6358 | 0.682852 | CGTCAGGGGGTGTTGAAGTA | 59.317 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4113 | 6359 | 1.342672 | ACGTCAGGGGGTGTTGAAGT | 61.343 | 55.000 | 0.00 | 0.00 | 32.45 | 3.01 |
4114 | 6360 | 0.602905 | GACGTCAGGGGGTGTTGAAG | 60.603 | 60.000 | 11.55 | 0.00 | 0.00 | 3.02 |
4115 | 6361 | 1.052124 | AGACGTCAGGGGGTGTTGAA | 61.052 | 55.000 | 19.50 | 0.00 | 0.00 | 2.69 |
4116 | 6362 | 0.178955 | TAGACGTCAGGGGGTGTTGA | 60.179 | 55.000 | 19.50 | 0.00 | 0.00 | 3.18 |
4117 | 6363 | 0.246635 | CTAGACGTCAGGGGGTGTTG | 59.753 | 60.000 | 19.50 | 0.00 | 0.00 | 3.33 |
4118 | 6364 | 0.113776 | TCTAGACGTCAGGGGGTGTT | 59.886 | 55.000 | 19.50 | 0.00 | 0.00 | 3.32 |
4119 | 6365 | 0.611340 | GTCTAGACGTCAGGGGGTGT | 60.611 | 60.000 | 19.50 | 0.00 | 0.00 | 4.16 |
4120 | 6366 | 0.323542 | AGTCTAGACGTCAGGGGGTG | 60.324 | 60.000 | 19.50 | 0.00 | 36.20 | 4.61 |
4121 | 6367 | 0.408700 | AAGTCTAGACGTCAGGGGGT | 59.591 | 55.000 | 19.50 | 0.00 | 36.20 | 4.95 |
4122 | 6368 | 2.431954 | TAAGTCTAGACGTCAGGGGG | 57.568 | 55.000 | 19.50 | 2.80 | 36.20 | 5.40 |
4123 | 6369 | 5.593502 | ACTAATTAAGTCTAGACGTCAGGGG | 59.406 | 44.000 | 19.50 | 8.36 | 30.33 | 4.79 |
4124 | 6370 | 6.696441 | ACTAATTAAGTCTAGACGTCAGGG | 57.304 | 41.667 | 19.50 | 7.20 | 30.33 | 4.45 |
4146 | 6392 | 8.211629 | ACATACATAAATCCCAAGTCTAAGGAC | 58.788 | 37.037 | 0.00 | 0.00 | 42.41 | 3.85 |
4147 | 6393 | 8.331931 | ACATACATAAATCCCAAGTCTAAGGA | 57.668 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
4148 | 6394 | 7.385205 | CGACATACATAAATCCCAAGTCTAAGG | 59.615 | 40.741 | 0.00 | 0.00 | 0.00 | 2.69 |
4149 | 6395 | 7.095607 | GCGACATACATAAATCCCAAGTCTAAG | 60.096 | 40.741 | 0.00 | 0.00 | 0.00 | 2.18 |
4150 | 6396 | 6.704493 | GCGACATACATAAATCCCAAGTCTAA | 59.296 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
4151 | 6397 | 6.183360 | TGCGACATACATAAATCCCAAGTCTA | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
4152 | 6398 | 5.057149 | GCGACATACATAAATCCCAAGTCT | 58.943 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
4153 | 6399 | 4.814234 | TGCGACATACATAAATCCCAAGTC | 59.186 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
4154 | 6400 | 4.776349 | TGCGACATACATAAATCCCAAGT | 58.224 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
4155 | 6401 | 5.056480 | TCTGCGACATACATAAATCCCAAG | 58.944 | 41.667 | 0.00 | 0.00 | 0.00 | 3.61 |
4156 | 6402 | 5.029807 | TCTGCGACATACATAAATCCCAA | 57.970 | 39.130 | 0.00 | 0.00 | 0.00 | 4.12 |
4157 | 6403 | 4.681074 | TCTGCGACATACATAAATCCCA | 57.319 | 40.909 | 0.00 | 0.00 | 0.00 | 4.37 |
4158 | 6404 | 5.700832 | TGATTCTGCGACATACATAAATCCC | 59.299 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4159 | 6405 | 6.785488 | TGATTCTGCGACATACATAAATCC | 57.215 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
4160 | 6406 | 9.669353 | AAAATGATTCTGCGACATACATAAATC | 57.331 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
4172 | 6418 | 9.663904 | GCAGTATTAATAAAAATGATTCTGCGA | 57.336 | 29.630 | 11.04 | 0.00 | 35.10 | 5.10 |
4174 | 6420 | 9.450807 | ACGCAGTATTAATAAAAATGATTCTGC | 57.549 | 29.630 | 14.35 | 14.35 | 41.94 | 4.26 |
4178 | 6424 | 9.030301 | GCCAACGCAGTATTAATAAAAATGATT | 57.970 | 29.630 | 0.00 | 0.00 | 45.00 | 2.57 |
4179 | 6425 | 8.194104 | TGCCAACGCAGTATTAATAAAAATGAT | 58.806 | 29.630 | 0.00 | 0.00 | 45.00 | 2.45 |
4180 | 6426 | 7.539436 | TGCCAACGCAGTATTAATAAAAATGA | 58.461 | 30.769 | 0.00 | 0.00 | 45.00 | 2.57 |
4181 | 6427 | 7.748031 | TGCCAACGCAGTATTAATAAAAATG | 57.252 | 32.000 | 0.00 | 0.00 | 45.00 | 2.32 |
4196 | 6442 | 1.335496 | GTTTAAGACCTTGCCAACGCA | 59.665 | 47.619 | 0.00 | 0.00 | 45.49 | 5.24 |
4197 | 6443 | 1.607148 | AGTTTAAGACCTTGCCAACGC | 59.393 | 47.619 | 0.00 | 0.00 | 0.00 | 4.84 |
4198 | 6444 | 2.875933 | TGAGTTTAAGACCTTGCCAACG | 59.124 | 45.455 | 0.00 | 0.00 | 0.00 | 4.10 |
4199 | 6445 | 4.578928 | TCTTGAGTTTAAGACCTTGCCAAC | 59.421 | 41.667 | 0.00 | 0.00 | 32.02 | 3.77 |
4200 | 6446 | 4.578928 | GTCTTGAGTTTAAGACCTTGCCAA | 59.421 | 41.667 | 7.27 | 0.00 | 46.84 | 4.52 |
4201 | 6447 | 4.134563 | GTCTTGAGTTTAAGACCTTGCCA | 58.865 | 43.478 | 7.27 | 0.00 | 46.84 | 4.92 |
4202 | 6448 | 4.750952 | GTCTTGAGTTTAAGACCTTGCC | 57.249 | 45.455 | 7.27 | 0.00 | 46.84 | 4.52 |
4221 | 6467 | 2.111384 | TGGTATCAGAGCCAAGAGGTC | 58.889 | 52.381 | 0.00 | 0.00 | 43.67 | 3.85 |
4222 | 6468 | 2.254152 | TGGTATCAGAGCCAAGAGGT | 57.746 | 50.000 | 0.00 | 0.00 | 37.19 | 3.85 |
4223 | 6469 | 5.012458 | TCAATATGGTATCAGAGCCAAGAGG | 59.988 | 44.000 | 1.06 | 0.00 | 38.38 | 3.69 |
4224 | 6470 | 6.106648 | TCAATATGGTATCAGAGCCAAGAG | 57.893 | 41.667 | 1.06 | 0.00 | 38.38 | 2.85 |
4225 | 6471 | 6.499106 | TTCAATATGGTATCAGAGCCAAGA | 57.501 | 37.500 | 1.06 | 0.00 | 38.38 | 3.02 |
4226 | 6472 | 7.446319 | TGAATTCAATATGGTATCAGAGCCAAG | 59.554 | 37.037 | 5.45 | 0.00 | 38.38 | 3.61 |
4227 | 6473 | 7.289310 | TGAATTCAATATGGTATCAGAGCCAA | 58.711 | 34.615 | 5.45 | 0.00 | 38.38 | 4.52 |
4228 | 6474 | 6.840527 | TGAATTCAATATGGTATCAGAGCCA | 58.159 | 36.000 | 5.45 | 0.00 | 39.33 | 4.75 |
4229 | 6475 | 7.627939 | GCATGAATTCAATATGGTATCAGAGCC | 60.628 | 40.741 | 13.09 | 0.00 | 0.00 | 4.70 |
4230 | 6476 | 7.120873 | AGCATGAATTCAATATGGTATCAGAGC | 59.879 | 37.037 | 13.09 | 0.00 | 31.45 | 4.09 |
4231 | 6477 | 8.563123 | AGCATGAATTCAATATGGTATCAGAG | 57.437 | 34.615 | 13.09 | 0.00 | 31.45 | 3.35 |
4232 | 6478 | 8.929260 | AAGCATGAATTCAATATGGTATCAGA | 57.071 | 30.769 | 13.09 | 0.00 | 32.77 | 3.27 |
4233 | 6479 | 9.976511 | AAAAGCATGAATTCAATATGGTATCAG | 57.023 | 29.630 | 13.09 | 0.00 | 32.77 | 2.90 |
4234 | 6480 | 9.970395 | GAAAAGCATGAATTCAATATGGTATCA | 57.030 | 29.630 | 13.09 | 0.00 | 32.77 | 2.15 |
4235 | 6481 | 9.415544 | GGAAAAGCATGAATTCAATATGGTATC | 57.584 | 33.333 | 13.09 | 12.69 | 32.77 | 2.24 |
4236 | 6482 | 8.084073 | CGGAAAAGCATGAATTCAATATGGTAT | 58.916 | 33.333 | 13.09 | 5.15 | 32.77 | 2.73 |
4237 | 6483 | 7.424803 | CGGAAAAGCATGAATTCAATATGGTA | 58.575 | 34.615 | 13.09 | 0.00 | 32.77 | 3.25 |
4238 | 6484 | 6.275335 | CGGAAAAGCATGAATTCAATATGGT | 58.725 | 36.000 | 13.09 | 9.25 | 34.34 | 3.55 |
4239 | 6485 | 5.176223 | GCGGAAAAGCATGAATTCAATATGG | 59.824 | 40.000 | 13.09 | 1.51 | 37.05 | 2.74 |
4240 | 6486 | 5.749588 | TGCGGAAAAGCATGAATTCAATATG | 59.250 | 36.000 | 13.09 | 7.69 | 42.92 | 1.78 |
4241 | 6487 | 5.904941 | TGCGGAAAAGCATGAATTCAATAT | 58.095 | 33.333 | 13.09 | 0.00 | 42.92 | 1.28 |
4242 | 6488 | 5.321959 | TGCGGAAAAGCATGAATTCAATA | 57.678 | 34.783 | 13.09 | 0.00 | 42.92 | 1.90 |
4243 | 6489 | 4.191033 | TGCGGAAAAGCATGAATTCAAT | 57.809 | 36.364 | 13.09 | 0.00 | 42.92 | 2.57 |
4244 | 6490 | 3.657015 | TGCGGAAAAGCATGAATTCAA | 57.343 | 38.095 | 13.09 | 0.00 | 42.92 | 2.69 |
4253 | 6499 | 2.092838 | CGTTTGTTTTTGCGGAAAAGCA | 59.907 | 40.909 | 23.69 | 23.69 | 46.54 | 3.91 |
4254 | 6500 | 2.345942 | TCGTTTGTTTTTGCGGAAAAGC | 59.654 | 40.909 | 19.41 | 19.41 | 37.88 | 3.51 |
4255 | 6501 | 4.569801 | TTCGTTTGTTTTTGCGGAAAAG | 57.430 | 36.364 | 14.59 | 3.00 | 37.88 | 2.27 |
4256 | 6502 | 5.120208 | TGAATTCGTTTGTTTTTGCGGAAAA | 59.880 | 32.000 | 11.06 | 11.06 | 34.93 | 2.29 |
4257 | 6503 | 4.625742 | TGAATTCGTTTGTTTTTGCGGAAA | 59.374 | 33.333 | 0.00 | 0.00 | 0.00 | 3.13 |
4258 | 6504 | 4.174009 | TGAATTCGTTTGTTTTTGCGGAA | 58.826 | 34.783 | 0.04 | 0.00 | 0.00 | 4.30 |
4259 | 6505 | 3.770666 | TGAATTCGTTTGTTTTTGCGGA | 58.229 | 36.364 | 0.04 | 0.00 | 0.00 | 5.54 |
4260 | 6506 | 4.444468 | CATGAATTCGTTTGTTTTTGCGG | 58.556 | 39.130 | 0.00 | 0.00 | 0.00 | 5.69 |
4261 | 6507 | 3.893709 | GCATGAATTCGTTTGTTTTTGCG | 59.106 | 39.130 | 0.00 | 0.00 | 0.00 | 4.85 |
4262 | 6508 | 5.081888 | AGCATGAATTCGTTTGTTTTTGC | 57.918 | 34.783 | 0.00 | 0.00 | 0.00 | 3.68 |
4263 | 6509 | 5.233902 | TGGAGCATGAATTCGTTTGTTTTTG | 59.766 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
4264 | 6510 | 5.355596 | TGGAGCATGAATTCGTTTGTTTTT | 58.644 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
4265 | 6511 | 4.942852 | TGGAGCATGAATTCGTTTGTTTT | 58.057 | 34.783 | 0.00 | 0.00 | 0.00 | 2.43 |
4266 | 6512 | 4.582701 | TGGAGCATGAATTCGTTTGTTT | 57.417 | 36.364 | 0.00 | 0.00 | 0.00 | 2.83 |
4267 | 6513 | 4.202101 | TGTTGGAGCATGAATTCGTTTGTT | 60.202 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
4268 | 6514 | 3.317711 | TGTTGGAGCATGAATTCGTTTGT | 59.682 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
4269 | 6515 | 3.899734 | TGTTGGAGCATGAATTCGTTTG | 58.100 | 40.909 | 0.00 | 0.00 | 0.00 | 2.93 |
4270 | 6516 | 4.582701 | TTGTTGGAGCATGAATTCGTTT | 57.417 | 36.364 | 0.00 | 0.00 | 0.00 | 3.60 |
4271 | 6517 | 4.037923 | AGTTTGTTGGAGCATGAATTCGTT | 59.962 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
4272 | 6518 | 3.569701 | AGTTTGTTGGAGCATGAATTCGT | 59.430 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
4273 | 6519 | 4.161333 | GAGTTTGTTGGAGCATGAATTCG | 58.839 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
4274 | 6520 | 5.125100 | TGAGTTTGTTGGAGCATGAATTC | 57.875 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
4275 | 6521 | 5.733620 | ATGAGTTTGTTGGAGCATGAATT | 57.266 | 34.783 | 0.00 | 0.00 | 0.00 | 2.17 |
4276 | 6522 | 5.244402 | TGAATGAGTTTGTTGGAGCATGAAT | 59.756 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4277 | 6523 | 4.583907 | TGAATGAGTTTGTTGGAGCATGAA | 59.416 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
4278 | 6524 | 4.143543 | TGAATGAGTTTGTTGGAGCATGA | 58.856 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
4279 | 6525 | 4.508461 | TGAATGAGTTTGTTGGAGCATG | 57.492 | 40.909 | 0.00 | 0.00 | 0.00 | 4.06 |
4280 | 6526 | 5.534207 | TTTGAATGAGTTTGTTGGAGCAT | 57.466 | 34.783 | 0.00 | 0.00 | 0.00 | 3.79 |
4281 | 6527 | 4.998671 | TTTGAATGAGTTTGTTGGAGCA | 57.001 | 36.364 | 0.00 | 0.00 | 0.00 | 4.26 |
4282 | 6528 | 5.351458 | ACTTTTGAATGAGTTTGTTGGAGC | 58.649 | 37.500 | 0.00 | 0.00 | 0.00 | 4.70 |
4283 | 6529 | 5.979517 | GGACTTTTGAATGAGTTTGTTGGAG | 59.020 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4284 | 6530 | 5.449862 | CGGACTTTTGAATGAGTTTGTTGGA | 60.450 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
4285 | 6531 | 4.739716 | CGGACTTTTGAATGAGTTTGTTGG | 59.260 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
4286 | 6532 | 4.739716 | CCGGACTTTTGAATGAGTTTGTTG | 59.260 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
4287 | 6533 | 4.642885 | TCCGGACTTTTGAATGAGTTTGTT | 59.357 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
4288 | 6534 | 4.204012 | TCCGGACTTTTGAATGAGTTTGT | 58.796 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
4289 | 6535 | 4.829064 | TCCGGACTTTTGAATGAGTTTG | 57.171 | 40.909 | 0.00 | 0.00 | 0.00 | 2.93 |
4290 | 6536 | 5.070001 | TCATCCGGACTTTTGAATGAGTTT | 58.930 | 37.500 | 6.12 | 0.00 | 0.00 | 2.66 |
4291 | 6537 | 4.651778 | TCATCCGGACTTTTGAATGAGTT | 58.348 | 39.130 | 6.12 | 0.00 | 0.00 | 3.01 |
4292 | 6538 | 4.286297 | TCATCCGGACTTTTGAATGAGT | 57.714 | 40.909 | 6.12 | 0.00 | 0.00 | 3.41 |
4293 | 6539 | 4.937620 | TCTTCATCCGGACTTTTGAATGAG | 59.062 | 41.667 | 16.50 | 7.44 | 0.00 | 2.90 |
4294 | 6540 | 4.905429 | TCTTCATCCGGACTTTTGAATGA | 58.095 | 39.130 | 16.50 | 13.23 | 0.00 | 2.57 |
4295 | 6541 | 4.937620 | TCTCTTCATCCGGACTTTTGAATG | 59.062 | 41.667 | 16.50 | 12.88 | 0.00 | 2.67 |
4296 | 6542 | 5.165961 | TCTCTTCATCCGGACTTTTGAAT | 57.834 | 39.130 | 16.50 | 0.00 | 0.00 | 2.57 |
4297 | 6543 | 4.563580 | CCTCTCTTCATCCGGACTTTTGAA | 60.564 | 45.833 | 6.12 | 12.42 | 0.00 | 2.69 |
4298 | 6544 | 3.055819 | CCTCTCTTCATCCGGACTTTTGA | 60.056 | 47.826 | 6.12 | 3.17 | 0.00 | 2.69 |
4299 | 6545 | 3.265791 | CCTCTCTTCATCCGGACTTTTG | 58.734 | 50.000 | 6.12 | 0.00 | 0.00 | 2.44 |
4300 | 6546 | 2.355209 | GCCTCTCTTCATCCGGACTTTT | 60.355 | 50.000 | 6.12 | 0.00 | 0.00 | 2.27 |
4301 | 6547 | 1.208293 | GCCTCTCTTCATCCGGACTTT | 59.792 | 52.381 | 6.12 | 0.00 | 0.00 | 2.66 |
4302 | 6548 | 0.827368 | GCCTCTCTTCATCCGGACTT | 59.173 | 55.000 | 6.12 | 0.00 | 0.00 | 3.01 |
4303 | 6549 | 1.388065 | CGCCTCTCTTCATCCGGACT | 61.388 | 60.000 | 6.12 | 0.00 | 0.00 | 3.85 |
4304 | 6550 | 1.066587 | CGCCTCTCTTCATCCGGAC | 59.933 | 63.158 | 6.12 | 0.00 | 0.00 | 4.79 |
4305 | 6551 | 2.127869 | CCGCCTCTCTTCATCCGGA | 61.128 | 63.158 | 6.61 | 6.61 | 38.04 | 5.14 |
4306 | 6552 | 2.419198 | CCGCCTCTCTTCATCCGG | 59.581 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
4307 | 6553 | 1.107538 | TACCCGCCTCTCTTCATCCG | 61.108 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4308 | 6554 | 1.120530 | TTACCCGCCTCTCTTCATCC | 58.879 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4309 | 6555 | 4.810191 | ATATTACCCGCCTCTCTTCATC | 57.190 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
4310 | 6556 | 5.334421 | AGTATATTACCCGCCTCTCTTCAT | 58.666 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
4311 | 6557 | 4.737578 | AGTATATTACCCGCCTCTCTTCA | 58.262 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
4312 | 6558 | 5.243283 | TGAAGTATATTACCCGCCTCTCTTC | 59.757 | 44.000 | 0.00 | 0.00 | 0.00 | 2.87 |
4313 | 6559 | 5.145564 | TGAAGTATATTACCCGCCTCTCTT | 58.854 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
4314 | 6560 | 4.737578 | TGAAGTATATTACCCGCCTCTCT | 58.262 | 43.478 | 0.00 | 0.00 | 0.00 | 3.10 |
4315 | 6561 | 5.221382 | TGTTGAAGTATATTACCCGCCTCTC | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 3.20 |
4316 | 6562 | 4.652421 | TGTTGAAGTATATTACCCGCCTCT | 59.348 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
4317 | 6563 | 4.952460 | TGTTGAAGTATATTACCCGCCTC | 58.048 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
4318 | 6564 | 4.202326 | CCTGTTGAAGTATATTACCCGCCT | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 5.52 |
4319 | 6565 | 4.062991 | CCTGTTGAAGTATATTACCCGCC | 58.937 | 47.826 | 0.00 | 0.00 | 0.00 | 6.13 |
4320 | 6566 | 4.700700 | ACCTGTTGAAGTATATTACCCGC | 58.299 | 43.478 | 0.00 | 0.00 | 0.00 | 6.13 |
4321 | 6567 | 6.259387 | GGAAACCTGTTGAAGTATATTACCCG | 59.741 | 42.308 | 0.00 | 0.00 | 0.00 | 5.28 |
4322 | 6568 | 7.344134 | AGGAAACCTGTTGAAGTATATTACCC | 58.656 | 38.462 | 0.00 | 0.00 | 29.57 | 3.69 |
4326 | 6572 | 9.614792 | GACATAGGAAACCTGTTGAAGTATATT | 57.385 | 33.333 | 0.00 | 0.00 | 34.61 | 1.28 |
4327 | 6573 | 7.926555 | CGACATAGGAAACCTGTTGAAGTATAT | 59.073 | 37.037 | 0.00 | 0.00 | 34.61 | 0.86 |
4328 | 6574 | 7.123098 | TCGACATAGGAAACCTGTTGAAGTATA | 59.877 | 37.037 | 0.00 | 0.00 | 35.24 | 1.47 |
4329 | 6575 | 6.070995 | TCGACATAGGAAACCTGTTGAAGTAT | 60.071 | 38.462 | 0.00 | 0.00 | 35.24 | 2.12 |
4330 | 6576 | 5.244402 | TCGACATAGGAAACCTGTTGAAGTA | 59.756 | 40.000 | 0.00 | 0.00 | 35.24 | 2.24 |
4331 | 6577 | 4.039973 | TCGACATAGGAAACCTGTTGAAGT | 59.960 | 41.667 | 0.00 | 0.00 | 35.24 | 3.01 |
4332 | 6578 | 4.566004 | TCGACATAGGAAACCTGTTGAAG | 58.434 | 43.478 | 0.00 | 0.00 | 35.24 | 3.02 |
4333 | 6579 | 4.610605 | TCGACATAGGAAACCTGTTGAA | 57.389 | 40.909 | 0.00 | 0.00 | 35.24 | 2.69 |
4334 | 6580 | 4.819105 | ATCGACATAGGAAACCTGTTGA | 57.181 | 40.909 | 0.00 | 0.00 | 39.72 | 3.18 |
4335 | 6581 | 4.508124 | GCTATCGACATAGGAAACCTGTTG | 59.492 | 45.833 | 0.00 | 0.00 | 34.61 | 3.33 |
4336 | 6582 | 4.161565 | TGCTATCGACATAGGAAACCTGTT | 59.838 | 41.667 | 0.00 | 0.00 | 34.61 | 3.16 |
4337 | 6583 | 3.704566 | TGCTATCGACATAGGAAACCTGT | 59.295 | 43.478 | 0.00 | 0.00 | 34.61 | 4.00 |
4338 | 6584 | 4.322080 | TGCTATCGACATAGGAAACCTG | 57.678 | 45.455 | 0.00 | 0.00 | 34.61 | 4.00 |
4339 | 6585 | 5.353394 | TTTGCTATCGACATAGGAAACCT | 57.647 | 39.130 | 8.21 | 0.00 | 43.97 | 3.50 |
4340 | 6586 | 6.619801 | ATTTTGCTATCGACATAGGAAACC | 57.380 | 37.500 | 11.01 | 0.00 | 46.73 | 3.27 |
4341 | 6587 | 7.042051 | TGCTATTTTGCTATCGACATAGGAAAC | 60.042 | 37.037 | 11.01 | 3.14 | 46.73 | 2.78 |
4342 | 6588 | 6.989759 | TGCTATTTTGCTATCGACATAGGAAA | 59.010 | 34.615 | 8.21 | 8.21 | 45.93 | 3.13 |
4352 | 6598 | 3.003689 | CCCTTGGTGCTATTTTGCTATCG | 59.996 | 47.826 | 0.00 | 0.00 | 0.00 | 2.92 |
4355 | 6603 | 3.449746 | ACCCTTGGTGCTATTTTGCTA | 57.550 | 42.857 | 0.00 | 0.00 | 32.98 | 3.49 |
4418 | 6671 | 8.474025 | ACACAAAGGAAATGAAAATACTGACAA | 58.526 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
4424 | 6677 | 9.626045 | CCTAAGACACAAAGGAAATGAAAATAC | 57.374 | 33.333 | 0.00 | 0.00 | 31.64 | 1.89 |
4451 | 6706 | 0.547075 | TTCCAGTGTTCCAAACGGGA | 59.453 | 50.000 | 0.00 | 0.00 | 46.61 | 5.14 |
4518 | 6777 | 1.880819 | TTCCTACGACGGTTCCTGCC | 61.881 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4562 | 6822 | 5.694006 | CCTGTGAAATTCCTATAGAAGCGAG | 59.306 | 44.000 | 0.00 | 0.00 | 38.07 | 5.03 |
4619 | 6879 | 0.098200 | CGGTCTTATGCGACGAGACA | 59.902 | 55.000 | 14.19 | 0.00 | 41.15 | 3.41 |
4652 | 6915 | 2.387125 | TTTGCTCGAGCGGTTGTTGC | 62.387 | 55.000 | 30.75 | 6.74 | 45.83 | 4.17 |
4658 | 6921 | 1.927895 | CTAGATTTTGCTCGAGCGGT | 58.072 | 50.000 | 30.75 | 16.96 | 45.83 | 5.68 |
4673 | 6938 | 5.575157 | TCCTTCTTTTCTCTCTCTGCTAGA | 58.425 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
4716 | 6981 | 1.909986 | AGTTCTTTCCTACCCCAGCTC | 59.090 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
4717 | 6982 | 2.040412 | CAAGTTCTTTCCTACCCCAGCT | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
4719 | 6984 | 3.412386 | CACAAGTTCTTTCCTACCCCAG | 58.588 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
4727 | 6992 | 3.208747 | TCTCCACCACAAGTTCTTTCC | 57.791 | 47.619 | 0.00 | 0.00 | 0.00 | 3.13 |
4759 | 7024 | 5.569355 | TGAATCTTGCCAAAGAACATCCTA | 58.431 | 37.500 | 0.00 | 0.00 | 45.44 | 2.94 |
4785 | 7106 | 2.438434 | CCTTAAGCCCGGCCTGTG | 60.438 | 66.667 | 5.55 | 0.00 | 0.00 | 3.66 |
4791 | 7112 | 0.893727 | AAACACAGCCTTAAGCCCGG | 60.894 | 55.000 | 0.00 | 0.00 | 45.47 | 5.73 |
4819 | 7140 | 4.478317 | TGGGACATCACAGGAATCCTAAAT | 59.522 | 41.667 | 0.00 | 0.00 | 34.38 | 1.40 |
4884 | 7205 | 6.835914 | ACGTGCAAAAGATAAGAATTGAGAG | 58.164 | 36.000 | 0.00 | 0.00 | 0.00 | 3.20 |
4886 | 7207 | 6.857964 | ACAACGTGCAAAAGATAAGAATTGAG | 59.142 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
4926 | 7247 | 5.687166 | ACACGGGATAGGAAAAATACAGA | 57.313 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
4946 | 7269 | 0.891904 | GTAAGGCCCCGCTTGAAACA | 60.892 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
5032 | 7360 | 6.079120 | CACACACACACACACACATATTATG | 58.921 | 40.000 | 2.03 | 2.03 | 0.00 | 1.90 |
5037 | 7365 | 2.675348 | CACACACACACACACACACATA | 59.325 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
5071 | 7399 | 8.037166 | GGAAAGGAGATTGCTTATCACAATTTT | 58.963 | 33.333 | 0.00 | 0.00 | 37.85 | 1.82 |
5072 | 7400 | 7.550712 | GGAAAGGAGATTGCTTATCACAATTT | 58.449 | 34.615 | 0.00 | 0.00 | 37.85 | 1.82 |
5073 | 7401 | 6.183360 | CGGAAAGGAGATTGCTTATCACAATT | 60.183 | 38.462 | 0.00 | 0.00 | 37.85 | 2.32 |
5074 | 7402 | 5.297776 | CGGAAAGGAGATTGCTTATCACAAT | 59.702 | 40.000 | 0.00 | 0.00 | 40.37 | 2.71 |
5076 | 7404 | 4.191544 | CGGAAAGGAGATTGCTTATCACA | 58.808 | 43.478 | 2.91 | 0.00 | 35.59 | 3.58 |
5077 | 7405 | 4.192317 | ACGGAAAGGAGATTGCTTATCAC | 58.808 | 43.478 | 0.00 | 0.00 | 35.59 | 3.06 |
5078 | 7406 | 4.487714 | ACGGAAAGGAGATTGCTTATCA | 57.512 | 40.909 | 0.00 | 0.00 | 35.59 | 2.15 |
5079 | 7407 | 6.049790 | AGTAACGGAAAGGAGATTGCTTATC | 58.950 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
5080 | 7408 | 5.990668 | AGTAACGGAAAGGAGATTGCTTAT | 58.009 | 37.500 | 0.00 | 0.00 | 0.00 | 1.73 |
5082 | 7410 | 4.287766 | AGTAACGGAAAGGAGATTGCTT | 57.712 | 40.909 | 0.00 | 0.00 | 0.00 | 3.91 |
5083 | 7411 | 3.983044 | AGTAACGGAAAGGAGATTGCT | 57.017 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
5085 | 7413 | 6.371548 | TGAATCAAGTAACGGAAAGGAGATTG | 59.628 | 38.462 | 0.00 | 0.00 | 0.00 | 2.67 |
5086 | 7414 | 6.472887 | TGAATCAAGTAACGGAAAGGAGATT | 58.527 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
5088 | 7416 | 5.477607 | TGAATCAAGTAACGGAAAGGAGA | 57.522 | 39.130 | 0.00 | 0.00 | 0.00 | 3.71 |
5091 | 7419 | 4.868171 | TCGATGAATCAAGTAACGGAAAGG | 59.132 | 41.667 | 0.00 | 0.00 | 0.00 | 3.11 |
5094 | 7422 | 5.231702 | TGTTCGATGAATCAAGTAACGGAA | 58.768 | 37.500 | 0.00 | 0.00 | 0.00 | 4.30 |
5097 | 7425 | 5.007039 | CGTTGTTCGATGAATCAAGTAACG | 58.993 | 41.667 | 0.00 | 0.00 | 42.86 | 3.18 |
5098 | 7426 | 5.783654 | CACGTTGTTCGATGAATCAAGTAAC | 59.216 | 40.000 | 0.00 | 0.00 | 42.86 | 2.50 |
5136 | 8212 | 0.248289 | CGGGAAAAGGAGCGGTAGAA | 59.752 | 55.000 | 0.00 | 0.00 | 0.00 | 2.10 |
5142 | 8218 | 2.358737 | ACTGCGGGAAAAGGAGCG | 60.359 | 61.111 | 0.00 | 0.00 | 0.00 | 5.03 |
5345 | 8956 | 9.659830 | ATTAATGAGTTTACGGCGATATTTTTC | 57.340 | 29.630 | 16.62 | 2.80 | 0.00 | 2.29 |
5570 | 9191 | 2.202987 | GGAGGCAGCGGTGATCAG | 60.203 | 66.667 | 20.69 | 0.00 | 0.00 | 2.90 |
5887 | 12472 | 1.168714 | GGCGCTTCTTGGAGAATGTT | 58.831 | 50.000 | 7.64 | 0.00 | 33.13 | 2.71 |
5918 | 12503 | 0.937304 | TTGTTGAGCGACAAGAGCAC | 59.063 | 50.000 | 0.00 | 0.00 | 39.30 | 4.40 |
5924 | 12509 | 1.330521 | GTCTGCTTTGTTGAGCGACAA | 59.669 | 47.619 | 13.07 | 0.00 | 45.64 | 3.18 |
5938 | 12523 | 0.689623 | CCAAGAACTCCAGGTCTGCT | 59.310 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
6030 | 12615 | 2.435410 | CGATGCTGCTCTGCCACA | 60.435 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
6114 | 12709 | 1.270571 | TGTCTGCATGCAAGTCCGTTA | 60.271 | 47.619 | 22.88 | 0.76 | 0.00 | 3.18 |
6513 | 13114 | 1.807886 | CCTGATGCTTGCTGCCTTC | 59.192 | 57.895 | 0.00 | 0.00 | 42.00 | 3.46 |
6608 | 13210 | 1.012841 | GTAGGGAGGACGTCGTACTG | 58.987 | 60.000 | 16.60 | 0.00 | 0.00 | 2.74 |
6615 | 13217 | 0.966920 | CAACTGTGTAGGGAGGACGT | 59.033 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
6643 | 13245 | 3.549433 | TTGCCCCCGTCACTCCCTA | 62.549 | 63.158 | 0.00 | 0.00 | 0.00 | 3.53 |
6667 | 13269 | 1.594293 | CGCAACACGGTGGTCTTCT | 60.594 | 57.895 | 13.48 | 0.00 | 38.44 | 2.85 |
6758 | 13360 | 2.933666 | CTGCTGCACACTGTGTCG | 59.066 | 61.111 | 11.12 | 8.10 | 35.75 | 4.35 |
6787 | 13389 | 2.126031 | GAGTCGCCTCCACGGTTC | 60.126 | 66.667 | 0.00 | 0.00 | 34.25 | 3.62 |
6840 | 13442 | 1.493950 | GCGTGCCATCTCATCTTCGG | 61.494 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6919 | 13521 | 4.131088 | GGGACGTCCTCCTGCGAC | 62.131 | 72.222 | 32.52 | 10.90 | 39.39 | 5.19 |
6920 | 13522 | 4.361971 | AGGGACGTCCTCCTGCGA | 62.362 | 66.667 | 32.52 | 0.00 | 44.06 | 5.10 |
6938 | 13540 | 3.866582 | CAGGCCCGGATCCAGACC | 61.867 | 72.222 | 13.41 | 9.18 | 0.00 | 3.85 |
7003 | 13605 | 2.346803 | CATACACCGACTTTGTCTGGG | 58.653 | 52.381 | 11.13 | 2.74 | 33.16 | 4.45 |
7052 | 13655 | 2.041922 | TCCGCCAGCCTCTACCAT | 60.042 | 61.111 | 0.00 | 0.00 | 0.00 | 3.55 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.