Multiple sequence alignment - TraesCS7B01G040300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G040300 chr7B 100.000 3480 0 0 1566 5045 40300525 40297046 0.000000e+00 6427.0
1 TraesCS7B01G040300 chr7B 100.000 1182 0 0 1 1182 40302090 40300909 0.000000e+00 2183.0
2 TraesCS7B01G040300 chr7D 95.020 1466 54 10 2908 4365 89477092 89475638 0.000000e+00 2285.0
3 TraesCS7B01G040300 chr7D 94.552 1138 40 7 1579 2713 89478402 89477284 0.000000e+00 1738.0
4 TraesCS7B01G040300 chr7D 91.813 171 8 3 2706 2871 89477259 89477090 3.040000e-57 233.0
5 TraesCS7B01G040300 chr7D 90.598 117 3 7 716 832 89479043 89478935 1.130000e-31 148.0
6 TraesCS7B01G040300 chr7D 94.737 57 2 1 486 542 89479189 89479134 2.500000e-13 87.9
7 TraesCS7B01G040300 chr7D 100.000 41 0 0 461 501 89479229 89479189 5.420000e-10 76.8
8 TraesCS7B01G040300 chr7A 94.868 1286 47 7 3207 4483 90505325 90504050 0.000000e+00 1991.0
9 TraesCS7B01G040300 chr7A 94.122 1310 60 13 1566 2870 90507234 90505937 0.000000e+00 1977.0
10 TraesCS7B01G040300 chr7A 90.725 345 22 2 2869 3203 90505894 90505550 7.700000e-123 451.0
11 TraesCS7B01G040300 chr7A 78.976 547 65 28 4523 5045 90503889 90503369 1.350000e-85 327.0
12 TraesCS7B01G040300 chr7A 79.511 532 30 25 455 946 90508453 90507961 6.350000e-79 305.0
13 TraesCS7B01G040300 chr7A 94.079 152 9 0 1031 1182 90507396 90507245 1.090000e-56 231.0
14 TraesCS7B01G040300 chr7A 76.923 143 16 12 4707 4840 145457935 145458069 1.170000e-06 65.8
15 TraesCS7B01G040300 chr6B 88.525 305 28 5 3844 4146 682943206 682942907 3.710000e-96 363.0
16 TraesCS7B01G040300 chr6B 88.235 306 26 8 3844 4146 682908632 682908334 1.730000e-94 357.0
17 TraesCS7B01G040300 chr6B 88.119 303 29 5 3846 4146 683002298 683002001 2.230000e-93 353.0
18 TraesCS7B01G040300 chr6B 79.710 138 23 5 4707 4842 538998059 538997925 1.500000e-15 95.3
19 TraesCS7B01G040300 chr3D 88.525 305 28 3 3844 4146 19057862 19058161 3.710000e-96 363.0
20 TraesCS7B01G040300 chr1D 88.889 216 18 6 185 399 45682114 45682324 1.390000e-65 261.0
21 TraesCS7B01G040300 chr1D 94.444 54 3 0 2867 2920 47644785 47644732 3.240000e-12 84.2
22 TraesCS7B01G040300 chr1D 92.727 55 4 0 2867 2921 96041072 96041018 4.190000e-11 80.5
23 TraesCS7B01G040300 chr5A 80.460 348 44 12 71 399 701472997 701473339 1.400000e-60 244.0
24 TraesCS7B01G040300 chr5A 84.021 194 26 5 191 382 443299109 443298919 1.120000e-41 182.0
25 TraesCS7B01G040300 chr5A 97.872 47 1 0 2866 2912 158915646 158915600 1.160000e-11 82.4
26 TraesCS7B01G040300 chr5A 94.231 52 3 0 2867 2918 375215464 375215413 4.190000e-11 80.5
27 TraesCS7B01G040300 chr5A 86.364 66 8 1 4777 4842 452497709 452497773 2.520000e-08 71.3
28 TraesCS7B01G040300 chr6D 86.449 214 25 4 188 399 4548243 4548032 1.090000e-56 231.0
29 TraesCS7B01G040300 chr4B 82.184 174 29 2 188 361 612345166 612345337 1.130000e-31 148.0
30 TraesCS7B01G040300 chr6A 92.982 57 2 2 2864 2919 54734590 54734645 1.160000e-11 82.4
31 TraesCS7B01G040300 chr2A 92.857 56 2 2 2867 2920 724733601 724733546 4.190000e-11 80.5
32 TraesCS7B01G040300 chr4A 97.727 44 1 0 2866 2909 30362652 30362695 5.420000e-10 76.8
33 TraesCS7B01G040300 chr4A 85.507 69 9 1 4777 4845 514232601 514232534 2.520000e-08 71.3
34 TraesCS7B01G040300 chr1B 84.810 79 9 3 4766 4843 423718088 423718164 5.420000e-10 76.8
35 TraesCS7B01G040300 chr3B 86.364 66 7 2 2869 2933 774168359 774168295 2.520000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G040300 chr7B 40297046 40302090 5044 True 4305.000000 6427 100.000000 1 5045 2 chr7B.!!$R1 5044
1 TraesCS7B01G040300 chr7D 89475638 89479229 3591 True 761.450000 2285 94.453333 461 4365 6 chr7D.!!$R1 3904
2 TraesCS7B01G040300 chr7A 90503369 90508453 5084 True 880.333333 1991 88.713500 455 5045 6 chr7A.!!$R1 4590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
411 412 0.107459 ATTTTGCTCTCGGCTCTCCC 60.107 55.0 0.00 0.0 42.39 4.30 F
1839 2383 0.263468 AGTAAGGCTCTCTCCCCTCC 59.737 60.0 0.00 0.0 0.00 4.30 F
3253 4115 1.132500 GCTGGTAGGCCTTGGATAGT 58.868 55.0 12.58 0.0 35.27 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1955 2500 0.886490 ACGGCTCTCAAACCAGCAAG 60.886 55.0 0.00 0.0 37.38 4.01 R
3299 4161 0.250038 ACACTGGCACACTGCTACTG 60.250 55.0 0.00 0.0 44.28 2.74 R
4923 5916 0.035881 AGGAGTACGTCGACCTCACA 59.964 55.0 18.19 0.0 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.806668 TTCTTCCCTTGTCCTTTCAAATTT 57.193 33.333 0.00 0.00 0.00 1.82
24 25 6.405278 TCTTCCCTTGTCCTTTCAAATTTC 57.595 37.500 0.00 0.00 0.00 2.17
25 26 5.896678 TCTTCCCTTGTCCTTTCAAATTTCA 59.103 36.000 0.00 0.00 0.00 2.69
26 27 6.554605 TCTTCCCTTGTCCTTTCAAATTTCAT 59.445 34.615 0.00 0.00 0.00 2.57
27 28 7.728083 TCTTCCCTTGTCCTTTCAAATTTCATA 59.272 33.333 0.00 0.00 0.00 2.15
28 29 7.466746 TCCCTTGTCCTTTCAAATTTCATAG 57.533 36.000 0.00 0.00 0.00 2.23
29 30 7.010160 TCCCTTGTCCTTTCAAATTTCATAGT 58.990 34.615 0.00 0.00 0.00 2.12
30 31 7.039784 TCCCTTGTCCTTTCAAATTTCATAGTG 60.040 37.037 0.00 0.00 0.00 2.74
31 32 7.092716 CCTTGTCCTTTCAAATTTCATAGTGG 58.907 38.462 0.00 0.00 0.00 4.00
32 33 7.255942 CCTTGTCCTTTCAAATTTCATAGTGGT 60.256 37.037 0.00 0.00 0.00 4.16
33 34 8.698973 TTGTCCTTTCAAATTTCATAGTGGTA 57.301 30.769 0.00 0.00 0.00 3.25
34 35 8.335532 TGTCCTTTCAAATTTCATAGTGGTAG 57.664 34.615 0.00 0.00 0.00 3.18
35 36 7.942341 TGTCCTTTCAAATTTCATAGTGGTAGT 59.058 33.333 0.00 0.00 0.00 2.73
36 37 8.793592 GTCCTTTCAAATTTCATAGTGGTAGTT 58.206 33.333 0.00 0.00 0.00 2.24
37 38 8.792633 TCCTTTCAAATTTCATAGTGGTAGTTG 58.207 33.333 0.00 0.00 0.00 3.16
38 39 8.028938 CCTTTCAAATTTCATAGTGGTAGTTGG 58.971 37.037 0.00 0.00 0.00 3.77
39 40 7.461182 TTCAAATTTCATAGTGGTAGTTGGG 57.539 36.000 0.00 0.00 0.00 4.12
40 41 6.548321 TCAAATTTCATAGTGGTAGTTGGGT 58.452 36.000 0.00 0.00 0.00 4.51
41 42 6.432783 TCAAATTTCATAGTGGTAGTTGGGTG 59.567 38.462 0.00 0.00 0.00 4.61
42 43 4.986054 TTTCATAGTGGTAGTTGGGTGT 57.014 40.909 0.00 0.00 0.00 4.16
43 44 6.630203 ATTTCATAGTGGTAGTTGGGTGTA 57.370 37.500 0.00 0.00 0.00 2.90
44 45 6.630203 TTTCATAGTGGTAGTTGGGTGTAT 57.370 37.500 0.00 0.00 0.00 2.29
45 46 5.607939 TCATAGTGGTAGTTGGGTGTATG 57.392 43.478 0.00 0.00 0.00 2.39
46 47 5.027460 TCATAGTGGTAGTTGGGTGTATGT 58.973 41.667 0.00 0.00 0.00 2.29
47 48 6.196434 TCATAGTGGTAGTTGGGTGTATGTA 58.804 40.000 0.00 0.00 0.00 2.29
48 49 6.842280 TCATAGTGGTAGTTGGGTGTATGTAT 59.158 38.462 0.00 0.00 0.00 2.29
49 50 5.353394 AGTGGTAGTTGGGTGTATGTATG 57.647 43.478 0.00 0.00 0.00 2.39
50 51 4.781087 AGTGGTAGTTGGGTGTATGTATGT 59.219 41.667 0.00 0.00 0.00 2.29
51 52 5.959594 AGTGGTAGTTGGGTGTATGTATGTA 59.040 40.000 0.00 0.00 0.00 2.29
52 53 6.614087 AGTGGTAGTTGGGTGTATGTATGTAT 59.386 38.462 0.00 0.00 0.00 2.29
53 54 7.785985 AGTGGTAGTTGGGTGTATGTATGTATA 59.214 37.037 0.00 0.00 0.00 1.47
54 55 8.086522 GTGGTAGTTGGGTGTATGTATGTATAG 58.913 40.741 0.00 0.00 0.00 1.31
55 56 7.785985 TGGTAGTTGGGTGTATGTATGTATAGT 59.214 37.037 0.00 0.00 0.00 2.12
56 57 8.302438 GGTAGTTGGGTGTATGTATGTATAGTC 58.698 40.741 0.00 0.00 0.00 2.59
57 58 9.075678 GTAGTTGGGTGTATGTATGTATAGTCT 57.924 37.037 0.00 0.00 0.00 3.24
58 59 7.952671 AGTTGGGTGTATGTATGTATAGTCTG 58.047 38.462 0.00 0.00 0.00 3.51
59 60 7.783119 AGTTGGGTGTATGTATGTATAGTCTGA 59.217 37.037 0.00 0.00 0.00 3.27
60 61 8.418662 GTTGGGTGTATGTATGTATAGTCTGAA 58.581 37.037 0.00 0.00 0.00 3.02
61 62 8.541899 TGGGTGTATGTATGTATAGTCTGAAA 57.458 34.615 0.00 0.00 0.00 2.69
62 63 8.983789 TGGGTGTATGTATGTATAGTCTGAAAA 58.016 33.333 0.00 0.00 0.00 2.29
63 64 9.826574 GGGTGTATGTATGTATAGTCTGAAAAA 57.173 33.333 0.00 0.00 0.00 1.94
87 88 4.900635 AGACGAATATCCAATTTGGTGC 57.099 40.909 14.98 0.00 39.03 5.01
88 89 3.632145 AGACGAATATCCAATTTGGTGCC 59.368 43.478 14.98 1.71 39.03 5.01
89 90 2.693074 ACGAATATCCAATTTGGTGCCC 59.307 45.455 14.98 2.33 39.03 5.36
90 91 2.692557 CGAATATCCAATTTGGTGCCCA 59.307 45.455 14.98 0.00 39.03 5.36
91 92 3.321682 CGAATATCCAATTTGGTGCCCAT 59.678 43.478 14.98 3.85 39.03 4.00
92 93 4.634199 GAATATCCAATTTGGTGCCCATG 58.366 43.478 14.98 0.00 39.03 3.66
93 94 1.955451 ATCCAATTTGGTGCCCATGT 58.045 45.000 14.98 0.00 39.03 3.21
94 95 1.265236 TCCAATTTGGTGCCCATGTC 58.735 50.000 14.98 0.00 39.03 3.06
95 96 1.203162 TCCAATTTGGTGCCCATGTCT 60.203 47.619 14.98 0.00 39.03 3.41
96 97 2.042297 TCCAATTTGGTGCCCATGTCTA 59.958 45.455 14.98 0.00 39.03 2.59
97 98 2.428171 CCAATTTGGTGCCCATGTCTAG 59.572 50.000 7.31 0.00 31.53 2.43
98 99 3.355378 CAATTTGGTGCCCATGTCTAGA 58.645 45.455 0.00 0.00 31.53 2.43
99 100 3.956199 CAATTTGGTGCCCATGTCTAGAT 59.044 43.478 0.00 0.00 31.53 1.98
100 101 2.715749 TTGGTGCCCATGTCTAGATG 57.284 50.000 0.00 0.00 31.53 2.90
101 102 0.839277 TGGTGCCCATGTCTAGATGG 59.161 55.000 5.50 5.50 42.45 3.51
102 103 1.131638 GGTGCCCATGTCTAGATGGA 58.868 55.000 13.12 0.00 45.24 3.41
103 104 1.490490 GGTGCCCATGTCTAGATGGAA 59.510 52.381 13.12 0.00 45.24 3.53
104 105 2.565841 GTGCCCATGTCTAGATGGAAC 58.434 52.381 13.12 7.83 45.24 3.62
105 106 2.171448 GTGCCCATGTCTAGATGGAACT 59.829 50.000 13.12 0.00 45.24 3.01
106 107 2.171237 TGCCCATGTCTAGATGGAACTG 59.829 50.000 13.12 0.00 45.24 3.16
107 108 2.435805 GCCCATGTCTAGATGGAACTGA 59.564 50.000 13.12 0.00 45.24 3.41
108 109 3.072184 GCCCATGTCTAGATGGAACTGAT 59.928 47.826 13.12 0.00 45.24 2.90
109 110 4.639334 CCCATGTCTAGATGGAACTGATG 58.361 47.826 13.12 0.00 45.24 3.07
110 111 4.346127 CCCATGTCTAGATGGAACTGATGA 59.654 45.833 13.12 0.00 45.24 2.92
111 112 5.163269 CCCATGTCTAGATGGAACTGATGAA 60.163 44.000 13.12 0.00 45.24 2.57
112 113 5.757320 CCATGTCTAGATGGAACTGATGAAC 59.243 44.000 6.54 0.00 45.24 3.18
113 114 6.343703 CATGTCTAGATGGAACTGATGAACA 58.656 40.000 0.00 0.00 0.00 3.18
114 115 8.376601 CCATGTCTAGATGGAACTGATGAACAG 61.377 44.444 6.54 0.00 45.24 3.16
122 123 3.329114 CTGATGAACAGTAGCGCGA 57.671 52.632 12.10 0.00 41.30 5.87
123 124 1.845266 CTGATGAACAGTAGCGCGAT 58.155 50.000 12.10 5.99 41.30 4.58
124 125 3.000082 CTGATGAACAGTAGCGCGATA 58.000 47.619 12.10 4.44 41.30 2.92
125 126 3.372060 CTGATGAACAGTAGCGCGATAA 58.628 45.455 12.10 0.00 41.30 1.75
126 127 3.776340 TGATGAACAGTAGCGCGATAAA 58.224 40.909 12.10 0.00 0.00 1.40
127 128 4.177783 TGATGAACAGTAGCGCGATAAAA 58.822 39.130 12.10 0.00 0.00 1.52
128 129 4.627900 TGATGAACAGTAGCGCGATAAAAA 59.372 37.500 12.10 0.00 0.00 1.94
182 183 7.737972 TTTTAATGGAAGATGTTCGAGTTCA 57.262 32.000 0.00 0.00 32.92 3.18
183 184 7.921786 TTTAATGGAAGATGTTCGAGTTCAT 57.078 32.000 0.00 0.00 32.92 2.57
184 185 5.808042 AATGGAAGATGTTCGAGTTCATG 57.192 39.130 0.00 0.00 32.92 3.07
185 186 4.535526 TGGAAGATGTTCGAGTTCATGA 57.464 40.909 0.00 0.00 32.92 3.07
186 187 5.089970 TGGAAGATGTTCGAGTTCATGAT 57.910 39.130 0.00 0.00 32.92 2.45
187 188 5.111989 TGGAAGATGTTCGAGTTCATGATC 58.888 41.667 0.00 0.00 32.92 2.92
188 189 5.105187 TGGAAGATGTTCGAGTTCATGATCT 60.105 40.000 5.98 5.98 32.92 2.75
189 190 5.461737 GGAAGATGTTCGAGTTCATGATCTC 59.538 44.000 19.72 19.72 32.92 2.75
194 195 1.203928 CGAGTTCATGATCTCGTGGC 58.796 55.000 33.31 11.86 45.37 5.01
195 196 1.469767 CGAGTTCATGATCTCGTGGCA 60.470 52.381 33.31 1.34 45.37 4.92
196 197 2.621338 GAGTTCATGATCTCGTGGCAA 58.379 47.619 16.10 0.00 33.80 4.52
197 198 3.002791 GAGTTCATGATCTCGTGGCAAA 58.997 45.455 16.10 0.00 33.80 3.68
198 199 3.411446 AGTTCATGATCTCGTGGCAAAA 58.589 40.909 0.00 0.00 33.80 2.44
199 200 3.820467 AGTTCATGATCTCGTGGCAAAAA 59.180 39.130 0.00 0.00 33.80 1.94
216 217 3.897141 AAAAAGAGAAAACCGGCCAAA 57.103 38.095 0.00 0.00 0.00 3.28
217 218 3.897141 AAAAGAGAAAACCGGCCAAAA 57.103 38.095 0.00 0.00 0.00 2.44
218 219 2.882927 AAGAGAAAACCGGCCAAAAC 57.117 45.000 0.00 0.00 0.00 2.43
219 220 1.770294 AGAGAAAACCGGCCAAAACA 58.230 45.000 0.00 0.00 0.00 2.83
220 221 1.681264 AGAGAAAACCGGCCAAAACAG 59.319 47.619 0.00 0.00 0.00 3.16
221 222 1.407618 GAGAAAACCGGCCAAAACAGT 59.592 47.619 0.00 0.00 0.00 3.55
222 223 1.136110 AGAAAACCGGCCAAAACAGTG 59.864 47.619 0.00 0.00 0.00 3.66
223 224 0.899019 AAAACCGGCCAAAACAGTGT 59.101 45.000 0.00 0.00 0.00 3.55
224 225 0.899019 AAACCGGCCAAAACAGTGTT 59.101 45.000 0.00 1.64 0.00 3.32
225 226 0.899019 AACCGGCCAAAACAGTGTTT 59.101 45.000 15.58 15.58 0.00 2.83
226 227 0.174617 ACCGGCCAAAACAGTGTTTG 59.825 50.000 21.53 14.65 38.07 2.93
227 228 0.457851 CCGGCCAAAACAGTGTTTGA 59.542 50.000 21.53 0.00 40.29 2.69
228 229 1.134965 CCGGCCAAAACAGTGTTTGAA 60.135 47.619 21.53 0.00 40.29 2.69
229 230 2.482839 CCGGCCAAAACAGTGTTTGAAT 60.483 45.455 21.53 3.79 40.29 2.57
230 231 3.243569 CCGGCCAAAACAGTGTTTGAATA 60.244 43.478 21.53 0.00 40.29 1.75
231 232 3.980775 CGGCCAAAACAGTGTTTGAATAG 59.019 43.478 21.53 10.03 40.29 1.73
232 233 4.499019 CGGCCAAAACAGTGTTTGAATAGT 60.499 41.667 21.53 2.28 40.29 2.12
233 234 5.278071 CGGCCAAAACAGTGTTTGAATAGTA 60.278 40.000 21.53 0.00 40.29 1.82
234 235 6.508777 GGCCAAAACAGTGTTTGAATAGTAA 58.491 36.000 21.53 0.00 40.29 2.24
235 236 6.981559 GGCCAAAACAGTGTTTGAATAGTAAA 59.018 34.615 21.53 0.00 40.29 2.01
236 237 7.655732 GGCCAAAACAGTGTTTGAATAGTAAAT 59.344 33.333 21.53 0.00 40.29 1.40
237 238 8.487176 GCCAAAACAGTGTTTGAATAGTAAATG 58.513 33.333 21.53 11.45 40.29 2.32
238 239 9.528018 CCAAAACAGTGTTTGAATAGTAAATGT 57.472 29.630 21.53 0.00 40.29 2.71
243 244 9.772973 ACAGTGTTTGAATAGTAAATGTACTCA 57.227 29.630 0.00 0.00 41.06 3.41
245 246 9.772973 AGTGTTTGAATAGTAAATGTACTCACA 57.227 29.630 0.00 0.00 41.06 3.58
247 248 9.990360 TGTTTGAATAGTAAATGTACTCACAGA 57.010 29.630 0.00 0.00 41.06 3.41
249 250 8.703604 TTGAATAGTAAATGTACTCACAGAGC 57.296 34.615 0.00 0.00 41.06 4.09
250 251 7.265673 TGAATAGTAAATGTACTCACAGAGCC 58.734 38.462 0.00 0.00 41.06 4.70
251 252 4.111375 AGTAAATGTACTCACAGAGCCG 57.889 45.455 0.00 0.00 35.55 5.52
252 253 3.762288 AGTAAATGTACTCACAGAGCCGA 59.238 43.478 0.00 0.00 35.55 5.54
253 254 2.949451 AATGTACTCACAGAGCCGAG 57.051 50.000 0.00 0.00 38.30 4.63
254 255 1.840737 ATGTACTCACAGAGCCGAGT 58.159 50.000 0.00 0.00 44.51 4.18
255 256 1.617322 TGTACTCACAGAGCCGAGTT 58.383 50.000 0.00 0.00 42.41 3.01
256 257 1.961394 TGTACTCACAGAGCCGAGTTT 59.039 47.619 0.00 0.00 42.41 2.66
257 258 2.364324 TGTACTCACAGAGCCGAGTTTT 59.636 45.455 0.00 0.00 42.41 2.43
258 259 3.570975 TGTACTCACAGAGCCGAGTTTTA 59.429 43.478 0.00 0.00 42.41 1.52
259 260 3.746045 ACTCACAGAGCCGAGTTTTAA 57.254 42.857 0.00 0.00 39.45 1.52
260 261 3.391049 ACTCACAGAGCCGAGTTTTAAC 58.609 45.455 0.00 0.00 39.45 2.01
261 262 3.069729 ACTCACAGAGCCGAGTTTTAACT 59.930 43.478 0.00 0.00 39.45 2.24
262 263 4.058817 CTCACAGAGCCGAGTTTTAACTT 58.941 43.478 0.00 0.00 39.88 2.66
263 264 4.448210 TCACAGAGCCGAGTTTTAACTTT 58.552 39.130 0.00 0.00 39.88 2.66
264 265 4.879545 TCACAGAGCCGAGTTTTAACTTTT 59.120 37.500 0.00 0.00 39.88 2.27
265 266 5.355910 TCACAGAGCCGAGTTTTAACTTTTT 59.644 36.000 0.00 0.00 39.88 1.94
279 280 4.134623 TTTTTGTCGCGCACTCCT 57.865 50.000 8.75 0.00 0.00 3.69
280 281 1.938861 TTTTTGTCGCGCACTCCTC 59.061 52.632 8.75 0.00 0.00 3.71
281 282 1.827315 TTTTTGTCGCGCACTCCTCG 61.827 55.000 8.75 0.00 0.00 4.63
282 283 2.686956 TTTTGTCGCGCACTCCTCGA 62.687 55.000 8.75 0.00 0.00 4.04
283 284 2.686956 TTTGTCGCGCACTCCTCGAA 62.687 55.000 8.75 0.00 33.81 3.71
284 285 2.202623 GTCGCGCACTCCTCGAAT 60.203 61.111 8.75 0.00 33.81 3.34
285 286 2.202610 TCGCGCACTCCTCGAATG 60.203 61.111 8.75 0.00 0.00 2.67
286 287 2.507102 CGCGCACTCCTCGAATGT 60.507 61.111 8.75 0.00 0.00 2.71
287 288 2.508891 CGCGCACTCCTCGAATGTC 61.509 63.158 8.75 0.00 0.00 3.06
288 289 1.446099 GCGCACTCCTCGAATGTCA 60.446 57.895 0.30 0.00 0.00 3.58
289 290 1.014044 GCGCACTCCTCGAATGTCAA 61.014 55.000 0.30 0.00 0.00 3.18
290 291 1.428448 CGCACTCCTCGAATGTCAAA 58.572 50.000 0.00 0.00 0.00 2.69
291 292 1.798223 CGCACTCCTCGAATGTCAAAA 59.202 47.619 0.00 0.00 0.00 2.44
292 293 2.411547 CGCACTCCTCGAATGTCAAAAC 60.412 50.000 0.00 0.00 0.00 2.43
293 294 2.808543 GCACTCCTCGAATGTCAAAACT 59.191 45.455 0.00 0.00 0.00 2.66
294 295 3.120511 GCACTCCTCGAATGTCAAAACTC 60.121 47.826 0.00 0.00 0.00 3.01
295 296 4.310769 CACTCCTCGAATGTCAAAACTCT 58.689 43.478 0.00 0.00 0.00 3.24
296 297 5.470368 CACTCCTCGAATGTCAAAACTCTA 58.530 41.667 0.00 0.00 0.00 2.43
297 298 5.346281 CACTCCTCGAATGTCAAAACTCTAC 59.654 44.000 0.00 0.00 0.00 2.59
298 299 4.817517 TCCTCGAATGTCAAAACTCTACC 58.182 43.478 0.00 0.00 0.00 3.18
299 300 4.282449 TCCTCGAATGTCAAAACTCTACCA 59.718 41.667 0.00 0.00 0.00 3.25
300 301 4.994852 CCTCGAATGTCAAAACTCTACCAA 59.005 41.667 0.00 0.00 0.00 3.67
301 302 5.468746 CCTCGAATGTCAAAACTCTACCAAA 59.531 40.000 0.00 0.00 0.00 3.28
302 303 6.017440 CCTCGAATGTCAAAACTCTACCAAAA 60.017 38.462 0.00 0.00 0.00 2.44
303 304 7.308589 CCTCGAATGTCAAAACTCTACCAAAAT 60.309 37.037 0.00 0.00 0.00 1.82
304 305 7.936584 TCGAATGTCAAAACTCTACCAAAATT 58.063 30.769 0.00 0.00 0.00 1.82
305 306 8.410141 TCGAATGTCAAAACTCTACCAAAATTT 58.590 29.630 0.00 0.00 0.00 1.82
306 307 8.479280 CGAATGTCAAAACTCTACCAAAATTTG 58.521 33.333 0.00 0.00 0.00 2.32
307 308 7.713764 ATGTCAAAACTCTACCAAAATTTGC 57.286 32.000 0.00 0.00 0.00 3.68
308 309 6.634805 TGTCAAAACTCTACCAAAATTTGCA 58.365 32.000 0.00 0.00 0.00 4.08
309 310 6.533367 TGTCAAAACTCTACCAAAATTTGCAC 59.467 34.615 0.00 0.00 0.00 4.57
310 311 5.746245 TCAAAACTCTACCAAAATTTGCACG 59.254 36.000 0.00 0.00 0.00 5.34
311 312 5.508200 AAACTCTACCAAAATTTGCACGA 57.492 34.783 0.00 0.00 0.00 4.35
312 313 5.508200 AACTCTACCAAAATTTGCACGAA 57.492 34.783 0.00 0.00 0.00 3.85
313 314 5.108385 ACTCTACCAAAATTTGCACGAAG 57.892 39.130 0.00 0.00 0.00 3.79
314 315 4.819630 ACTCTACCAAAATTTGCACGAAGA 59.180 37.500 0.00 0.00 0.00 2.87
315 316 5.473504 ACTCTACCAAAATTTGCACGAAGAT 59.526 36.000 0.00 0.00 0.00 2.40
316 317 5.938322 TCTACCAAAATTTGCACGAAGATC 58.062 37.500 0.00 0.00 0.00 2.75
317 318 4.582701 ACCAAAATTTGCACGAAGATCA 57.417 36.364 0.00 0.00 0.00 2.92
318 319 4.298332 ACCAAAATTTGCACGAAGATCAC 58.702 39.130 0.00 0.00 0.00 3.06
319 320 3.361644 CCAAAATTTGCACGAAGATCACG 59.638 43.478 0.00 10.02 0.00 4.35
320 321 2.247311 AATTTGCACGAAGATCACGC 57.753 45.000 11.20 0.00 0.00 5.34
321 322 1.155889 ATTTGCACGAAGATCACGCA 58.844 45.000 11.20 2.09 0.00 5.24
322 323 0.234625 TTTGCACGAAGATCACGCAC 59.765 50.000 11.20 5.57 31.10 5.34
323 324 0.878086 TTGCACGAAGATCACGCACA 60.878 50.000 11.20 7.66 31.10 4.57
324 325 1.130613 GCACGAAGATCACGCACAC 59.869 57.895 11.20 0.00 0.00 3.82
325 326 1.556591 GCACGAAGATCACGCACACA 61.557 55.000 11.20 0.00 0.00 3.72
326 327 1.070821 CACGAAGATCACGCACACAT 58.929 50.000 11.20 0.00 0.00 3.21
327 328 1.070821 ACGAAGATCACGCACACATG 58.929 50.000 11.20 0.00 0.00 3.21
347 348 4.852134 TGCATCTAGCTTGCAAAAGAAA 57.148 36.364 9.10 0.00 46.48 2.52
348 349 5.199024 TGCATCTAGCTTGCAAAAGAAAA 57.801 34.783 9.10 0.00 46.48 2.29
349 350 5.599732 TGCATCTAGCTTGCAAAAGAAAAA 58.400 33.333 9.10 0.00 46.48 1.94
350 351 6.225318 TGCATCTAGCTTGCAAAAGAAAAAT 58.775 32.000 9.10 0.00 46.48 1.82
351 352 6.366877 TGCATCTAGCTTGCAAAAGAAAAATC 59.633 34.615 9.10 0.00 46.48 2.17
352 353 6.453396 GCATCTAGCTTGCAAAAGAAAAATCG 60.453 38.462 0.00 0.00 39.90 3.34
353 354 5.460646 TCTAGCTTGCAAAAGAAAAATCGG 58.539 37.500 0.00 0.00 0.00 4.18
354 355 4.320608 AGCTTGCAAAAGAAAAATCGGA 57.679 36.364 0.00 0.00 0.00 4.55
355 356 4.886579 AGCTTGCAAAAGAAAAATCGGAT 58.113 34.783 0.00 0.00 0.00 4.18
356 357 5.299949 AGCTTGCAAAAGAAAAATCGGATT 58.700 33.333 0.00 0.00 0.00 3.01
357 358 5.759763 AGCTTGCAAAAGAAAAATCGGATTT 59.240 32.000 10.11 10.11 0.00 2.17
358 359 6.260714 AGCTTGCAAAAGAAAAATCGGATTTT 59.739 30.769 20.12 20.12 43.83 1.82
409 410 4.946784 TTTTATTTTGCTCTCGGCTCTC 57.053 40.909 0.00 0.00 42.39 3.20
410 411 2.604046 TATTTTGCTCTCGGCTCTCC 57.396 50.000 0.00 0.00 42.39 3.71
411 412 0.107459 ATTTTGCTCTCGGCTCTCCC 60.107 55.000 0.00 0.00 42.39 4.30
432 433 4.373116 CGTGGTGACCGGTGAGGG 62.373 72.222 14.63 0.00 46.96 4.30
433 434 2.920912 GTGGTGACCGGTGAGGGA 60.921 66.667 14.63 0.00 46.96 4.20
434 435 2.121832 TGGTGACCGGTGAGGGAT 59.878 61.111 14.63 0.00 46.96 3.85
435 436 1.987855 TGGTGACCGGTGAGGGATC 60.988 63.158 14.63 0.00 46.96 3.36
436 437 1.987855 GGTGACCGGTGAGGGATCA 60.988 63.158 14.63 0.00 46.96 2.92
437 438 1.218316 GTGACCGGTGAGGGATCAC 59.782 63.158 14.63 8.42 46.96 3.06
438 439 2.348104 TGACCGGTGAGGGATCACG 61.348 63.158 14.63 0.00 46.96 4.35
439 440 2.283676 ACCGGTGAGGGATCACGT 60.284 61.111 6.12 0.00 46.96 4.49
440 441 2.280823 GACCGGTGAGGGATCACGTC 62.281 65.000 14.63 2.37 46.96 4.34
441 442 2.102357 CGGTGAGGGATCACGTCG 59.898 66.667 0.00 0.00 41.26 5.12
442 443 2.494918 GGTGAGGGATCACGTCGG 59.505 66.667 0.00 0.00 41.26 4.79
443 444 2.348888 GGTGAGGGATCACGTCGGT 61.349 63.158 0.00 0.00 41.26 4.69
444 445 1.033746 GGTGAGGGATCACGTCGGTA 61.034 60.000 0.00 0.00 41.26 4.02
445 446 0.813184 GTGAGGGATCACGTCGGTAA 59.187 55.000 0.00 0.00 36.79 2.85
446 447 1.203052 GTGAGGGATCACGTCGGTAAA 59.797 52.381 0.00 0.00 36.79 2.01
447 448 2.104967 TGAGGGATCACGTCGGTAAAT 58.895 47.619 0.00 0.00 36.79 1.40
448 449 2.100252 TGAGGGATCACGTCGGTAAATC 59.900 50.000 0.00 0.00 36.79 2.17
449 450 1.411612 AGGGATCACGTCGGTAAATCC 59.588 52.381 0.00 3.30 37.13 3.01
450 451 1.539712 GGGATCACGTCGGTAAATCCC 60.540 57.143 15.98 15.98 44.32 3.85
451 452 1.411612 GGATCACGTCGGTAAATCCCT 59.588 52.381 0.00 0.00 34.14 4.20
452 453 2.545322 GGATCACGTCGGTAAATCCCTC 60.545 54.545 0.00 0.00 34.14 4.30
453 454 1.843368 TCACGTCGGTAAATCCCTCT 58.157 50.000 0.00 0.00 0.00 3.69
458 459 2.165845 CGTCGGTAAATCCCTCTTGACT 59.834 50.000 0.00 0.00 0.00 3.41
517 533 3.308402 CCCACCAGATAGTCAAACCATGT 60.308 47.826 0.00 0.00 0.00 3.21
548 564 1.907222 CTGGACCCGTTTACCCCTCC 61.907 65.000 0.00 0.00 0.00 4.30
550 566 3.004946 ACCCGTTTACCCCTCCGG 61.005 66.667 0.00 0.00 40.12 5.14
561 577 3.515611 CCTCCGGGAAGACTCGAG 58.484 66.667 11.84 11.84 43.41 4.04
562 578 1.378778 CCTCCGGGAAGACTCGAGT 60.379 63.158 20.18 20.18 43.41 4.18
563 579 1.378124 CCTCCGGGAAGACTCGAGTC 61.378 65.000 33.52 33.52 43.41 3.36
787 827 1.457831 GCCGAGTCCTACCCCATCT 60.458 63.158 0.00 0.00 0.00 2.90
800 840 1.203050 CCCCATCTCTCTCCTCTCTCC 60.203 61.905 0.00 0.00 0.00 3.71
801 841 1.782752 CCCATCTCTCTCCTCTCTCCT 59.217 57.143 0.00 0.00 0.00 3.69
802 842 2.224867 CCCATCTCTCTCCTCTCTCCTC 60.225 59.091 0.00 0.00 0.00 3.71
803 843 2.713167 CCATCTCTCTCCTCTCTCCTCT 59.287 54.545 0.00 0.00 0.00 3.69
804 844 3.244700 CCATCTCTCTCCTCTCTCCTCTC 60.245 56.522 0.00 0.00 0.00 3.20
805 845 3.421394 TCTCTCTCCTCTCTCCTCTCT 57.579 52.381 0.00 0.00 0.00 3.10
806 846 3.309296 TCTCTCTCCTCTCTCCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
808 848 1.421646 CTCTCCTCTCTCCTCTCTCCC 59.578 61.905 0.00 0.00 0.00 4.30
809 849 1.010793 TCTCCTCTCTCCTCTCTCCCT 59.989 57.143 0.00 0.00 0.00 4.20
810 850 1.421646 CTCCTCTCTCCTCTCTCCCTC 59.578 61.905 0.00 0.00 0.00 4.30
811 851 1.010793 TCCTCTCTCCTCTCTCCCTCT 59.989 57.143 0.00 0.00 0.00 3.69
812 852 1.421646 CCTCTCTCCTCTCTCCCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
813 853 2.412591 CTCTCTCCTCTCTCCCTCTCT 58.587 57.143 0.00 0.00 0.00 3.10
814 854 2.370189 CTCTCTCCTCTCTCCCTCTCTC 59.630 59.091 0.00 0.00 0.00 3.20
815 855 2.022035 TCTCTCCTCTCTCCCTCTCTCT 60.022 54.545 0.00 0.00 0.00 3.10
832 872 5.280499 TCTCTCTCCAAGTCCCAATCATTA 58.720 41.667 0.00 0.00 0.00 1.90
836 876 2.243736 TCCAAGTCCCAATCATTACCCC 59.756 50.000 0.00 0.00 0.00 4.95
837 877 2.024464 CCAAGTCCCAATCATTACCCCA 60.024 50.000 0.00 0.00 0.00 4.96
877 927 3.573772 GAAGCAAAGCAACCCCGCC 62.574 63.158 0.00 0.00 0.00 6.13
903 953 1.732917 CCGCAACCAGAAAGCAACA 59.267 52.632 0.00 0.00 0.00 3.33
905 955 1.199624 CGCAACCAGAAAGCAACAAC 58.800 50.000 0.00 0.00 0.00 3.32
1089 1633 3.672295 CTGCTTCCTCCACCCGCTC 62.672 68.421 0.00 0.00 0.00 5.03
1839 2383 0.263468 AGTAAGGCTCTCTCCCCTCC 59.737 60.000 0.00 0.00 0.00 4.30
1955 2500 8.157476 TCAGTTAAGGGGAGATAGATTTAATGC 58.843 37.037 0.00 0.00 0.00 3.56
2026 2571 2.768022 GGAAGGGATGGGGGCGAAT 61.768 63.158 0.00 0.00 0.00 3.34
2105 2650 8.566260 GTGTAGTCGATGTAGAGTTACCATATT 58.434 37.037 0.00 0.00 0.00 1.28
2122 2667 5.700373 ACCATATTTTGTTTTCATGCGCTTT 59.300 32.000 9.73 0.00 0.00 3.51
2123 2668 6.204495 ACCATATTTTGTTTTCATGCGCTTTT 59.796 30.769 9.73 0.00 0.00 2.27
2134 2679 2.611974 TGCGCTTTTTGCTAAGCTAC 57.388 45.000 9.73 8.50 46.50 3.58
2206 2752 9.099454 CATACCTCTTGAAACTTAAGTATGTCC 57.901 37.037 8.92 0.00 34.04 4.02
2306 2852 8.286800 CGGTATGAAACTGTTCTTCACATTTAA 58.713 33.333 0.00 0.00 35.70 1.52
2359 2905 4.211584 GCAGATGCTACAATCTCTGATGTG 59.788 45.833 0.00 0.00 37.85 3.21
2386 2932 8.438618 AGAGAGATCATATGGAAGTCATTGAT 57.561 34.615 2.13 0.00 36.86 2.57
2398 2944 4.574674 AGTCATTGATAAGCTTGTCCCA 57.425 40.909 19.18 7.58 0.00 4.37
2556 3105 5.263599 TGATTCTTATGCATTGTTCCCTGT 58.736 37.500 3.54 0.00 0.00 4.00
2572 3121 8.561738 TGTTCCCTGTTAATCTAATTTCTGTC 57.438 34.615 0.00 0.00 0.00 3.51
2575 3124 6.816640 TCCCTGTTAATCTAATTTCTGTCGTG 59.183 38.462 0.00 0.00 0.00 4.35
2594 3143 6.428465 TGTCGTGGAACTGATTTTTATGCTAA 59.572 34.615 0.00 0.00 31.75 3.09
2789 3370 4.460382 AGCTGACATAAACAAGATTGGGTG 59.540 41.667 0.00 0.00 0.00 4.61
2875 3504 8.817100 TCATTCAGCAAATAAATACTAGTGTCG 58.183 33.333 5.39 0.00 0.00 4.35
2881 3510 8.166706 AGCAAATAAATACTAGTGTCGAAAACG 58.833 33.333 5.39 0.00 0.00 3.60
2882 3511 7.045804 GCAAATAAATACTAGTGTCGAAAACGC 60.046 37.037 5.39 0.00 38.74 4.84
2888 3517 5.056894 ACTAGTGTCGAAAACGCTCTTAT 57.943 39.130 0.00 0.00 45.69 1.73
2928 3557 6.937465 GGAGTAGAATTTATCCTGGGAATCAC 59.063 42.308 0.00 0.00 0.00 3.06
2931 3560 8.160106 AGTAGAATTTATCCTGGGAATCACATC 58.840 37.037 0.00 0.00 0.00 3.06
3026 3662 3.007635 GGGTAATGTGTACTGAGGTTGC 58.992 50.000 0.00 0.00 0.00 4.17
3246 4108 1.867595 ATTGGCTGCTGGTAGGCCTT 61.868 55.000 12.58 0.00 45.45 4.35
3247 4109 2.439156 GGCTGCTGGTAGGCCTTG 60.439 66.667 12.58 0.00 42.31 3.61
3250 4112 1.918253 CTGCTGGTAGGCCTTGGAT 59.082 57.895 12.58 0.00 35.27 3.41
3253 4115 1.132500 GCTGGTAGGCCTTGGATAGT 58.868 55.000 12.58 0.00 35.27 2.12
3259 4121 3.181464 GGTAGGCCTTGGATAGTTCACTC 60.181 52.174 12.58 0.00 0.00 3.51
3299 4161 4.106197 CCAGCACGTACTGTTATCTCTTC 58.894 47.826 14.56 0.00 35.83 2.87
3381 4243 6.315144 GTGGTTTTATGCCATGTTTTTATCCC 59.685 38.462 0.00 0.00 38.40 3.85
3413 4275 8.713271 GTCATTCTTCTCTTTGTTACCTTAGTG 58.287 37.037 0.00 0.00 0.00 2.74
3427 4289 7.069085 TGTTACCTTAGTGTTAGACTGAAGTGT 59.931 37.037 0.00 0.00 35.96 3.55
3435 4297 6.703607 AGTGTTAGACTGAAGTGTTGAAGATG 59.296 38.462 0.00 0.00 31.75 2.90
3472 4334 0.746063 TGCTGAGCTGTGTTTTTGGG 59.254 50.000 5.83 0.00 0.00 4.12
3533 4397 3.943671 TTTTCAGGAAGACACCCAGAA 57.056 42.857 0.00 0.00 0.00 3.02
3654 4518 0.529378 GGAGCCATGCTTTGACCAAG 59.471 55.000 0.00 0.00 39.88 3.61
3855 4719 2.609459 GGACAAATACATGGACTCGCTG 59.391 50.000 0.00 0.00 0.00 5.18
4035 4899 5.067936 TCAGGATTCGGAGTTTGAGATACTC 59.932 44.000 0.00 0.00 41.00 2.59
4057 4921 6.263392 ACTCGACAGCTAGCAATAATAAGAGA 59.737 38.462 18.83 1.55 0.00 3.10
4060 4924 6.250315 CGACAGCTAGCAATAATAAGAGATCG 59.750 42.308 18.83 3.98 0.00 3.69
4062 4926 6.865726 ACAGCTAGCAATAATAAGAGATCGTG 59.134 38.462 18.83 2.26 0.00 4.35
4245 5114 7.538678 CACTTGCTGTAACATAAGGAATTTGTC 59.461 37.037 0.00 0.00 0.00 3.18
4299 5168 1.475682 CCTCCCTGCTGCAGAAAATTC 59.524 52.381 30.10 0.00 32.44 2.17
4323 5192 7.208777 TCATGTTGCATACTGTTTTTCATGTT 58.791 30.769 0.00 0.00 34.02 2.71
4325 5194 7.231705 TGTTGCATACTGTTTTTCATGTTTG 57.768 32.000 0.00 0.00 0.00 2.93
4329 5198 3.192541 ACTGTTTTTCATGTTTGGGCC 57.807 42.857 0.00 0.00 0.00 5.80
4339 5208 1.408969 TGTTTGGGCCTTTTCTGGTC 58.591 50.000 4.53 0.00 0.00 4.02
4357 5226 3.563808 TGGTCGGTTTGTGAGAATTCTTG 59.436 43.478 9.87 0.00 0.00 3.02
4372 5241 8.378565 TGAGAATTCTTGAGTTCAGAAATAGGT 58.621 33.333 9.87 0.00 0.00 3.08
4451 5320 2.160205 GTAAAAGAGGGCAGGGTGTTC 58.840 52.381 0.00 0.00 0.00 3.18
4452 5321 0.537371 AAAAGAGGGCAGGGTGTTCG 60.537 55.000 0.00 0.00 0.00 3.95
4453 5322 1.705997 AAAGAGGGCAGGGTGTTCGT 61.706 55.000 0.00 0.00 0.00 3.85
4454 5323 2.358737 GAGGGCAGGGTGTTCGTG 60.359 66.667 0.00 0.00 0.00 4.35
4483 5352 5.701224 TCATAACAAAAGAGAACCAACCCT 58.299 37.500 0.00 0.00 0.00 4.34
4484 5353 6.133356 TCATAACAAAAGAGAACCAACCCTT 58.867 36.000 0.00 0.00 0.00 3.95
4485 5354 6.264518 TCATAACAAAAGAGAACCAACCCTTC 59.735 38.462 0.00 0.00 0.00 3.46
4486 5355 3.296854 ACAAAAGAGAACCAACCCTTCC 58.703 45.455 0.00 0.00 0.00 3.46
4487 5356 3.052869 ACAAAAGAGAACCAACCCTTCCT 60.053 43.478 0.00 0.00 0.00 3.36
4489 5358 5.162980 ACAAAAGAGAACCAACCCTTCCTAT 60.163 40.000 0.00 0.00 0.00 2.57
4490 5359 6.045106 ACAAAAGAGAACCAACCCTTCCTATA 59.955 38.462 0.00 0.00 0.00 1.31
4491 5360 6.910259 AAAGAGAACCAACCCTTCCTATAT 57.090 37.500 0.00 0.00 0.00 0.86
4492 5361 8.272173 CAAAAGAGAACCAACCCTTCCTATATA 58.728 37.037 0.00 0.00 0.00 0.86
4494 5363 8.582891 AAGAGAACCAACCCTTCCTATATATT 57.417 34.615 0.00 0.00 0.00 1.28
4495 5364 8.582891 AGAGAACCAACCCTTCCTATATATTT 57.417 34.615 0.00 0.00 0.00 1.40
4496 5365 8.661345 AGAGAACCAACCCTTCCTATATATTTC 58.339 37.037 0.00 0.00 0.00 2.17
4497 5366 7.756614 AGAACCAACCCTTCCTATATATTTCC 58.243 38.462 0.00 0.00 0.00 3.13
4499 5368 7.331089 ACCAACCCTTCCTATATATTTCCTC 57.669 40.000 0.00 0.00 0.00 3.71
4500 5369 6.855061 ACCAACCCTTCCTATATATTTCCTCA 59.145 38.462 0.00 0.00 0.00 3.86
4502 5371 8.224720 CCAACCCTTCCTATATATTTCCTCAAA 58.775 37.037 0.00 0.00 0.00 2.69
4503 5372 9.640952 CAACCCTTCCTATATATTTCCTCAAAA 57.359 33.333 0.00 0.00 0.00 2.44
4505 5374 9.868160 ACCCTTCCTATATATTTCCTCAAAAAG 57.132 33.333 0.00 0.00 0.00 2.27
4554 5544 3.638860 TCGGGTAGAAAATCTGAGCCTA 58.361 45.455 0.00 0.00 0.00 3.93
4583 5573 6.882656 ACAGCATCTAGACAAACTATGTGAT 58.117 36.000 0.00 0.00 44.12 3.06
4584 5574 6.760298 ACAGCATCTAGACAAACTATGTGATG 59.240 38.462 0.00 0.00 44.12 3.07
4597 5587 6.500684 ACTATGTGATGAAAACTGCGAAAT 57.499 33.333 0.00 0.00 0.00 2.17
4599 5589 8.039603 ACTATGTGATGAAAACTGCGAAATTA 57.960 30.769 0.00 0.00 0.00 1.40
4600 5590 8.177663 ACTATGTGATGAAAACTGCGAAATTAG 58.822 33.333 0.00 0.00 0.00 1.73
4602 5592 4.558860 GTGATGAAAACTGCGAAATTAGGC 59.441 41.667 0.00 0.00 0.00 3.93
4632 5622 4.927782 GCGGGCCATACGGATGCA 62.928 66.667 4.39 0.00 0.00 3.96
4633 5623 2.032528 CGGGCCATACGGATGCAT 59.967 61.111 4.39 0.00 0.00 3.96
4666 5656 0.461961 TTTTTCGTTTGGGTGGCCAG 59.538 50.000 5.11 0.00 0.00 4.85
4667 5657 0.684805 TTTTCGTTTGGGTGGCCAGT 60.685 50.000 5.11 0.00 0.00 4.00
4668 5658 1.104577 TTTCGTTTGGGTGGCCAGTC 61.105 55.000 5.11 1.00 0.00 3.51
4669 5659 3.353836 CGTTTGGGTGGCCAGTCG 61.354 66.667 5.11 0.86 0.00 4.18
4671 5661 1.966451 GTTTGGGTGGCCAGTCGAG 60.966 63.158 5.11 0.00 0.00 4.04
4672 5662 2.448582 TTTGGGTGGCCAGTCGAGT 61.449 57.895 5.11 0.00 0.00 4.18
4673 5663 2.391724 TTTGGGTGGCCAGTCGAGTC 62.392 60.000 5.11 0.00 0.00 3.36
4674 5664 2.997897 GGGTGGCCAGTCGAGTCT 60.998 66.667 5.11 0.00 0.00 3.24
4675 5665 1.681327 GGGTGGCCAGTCGAGTCTA 60.681 63.158 5.11 0.00 0.00 2.59
4676 5666 1.043673 GGGTGGCCAGTCGAGTCTAT 61.044 60.000 5.11 0.00 0.00 1.98
4677 5667 0.386113 GGTGGCCAGTCGAGTCTATC 59.614 60.000 5.11 0.00 0.00 2.08
4680 5670 1.342076 TGGCCAGTCGAGTCTATCCTT 60.342 52.381 0.00 0.00 0.00 3.36
4683 5673 3.369576 GGCCAGTCGAGTCTATCCTTTTT 60.370 47.826 0.00 0.00 0.00 1.94
4734 5724 2.166579 CGGCGCATCCCAAATTTGC 61.167 57.895 10.83 0.55 0.00 3.68
4740 5730 1.134729 GCATCCCAAATTTGCGGATGT 60.135 47.619 36.92 21.74 46.42 3.06
4743 5733 4.753233 CATCCCAAATTTGCGGATGTAAA 58.247 39.130 33.69 16.25 43.45 2.01
4874 5867 0.178953 AAAGGGTCAATGCAGGTGCT 60.179 50.000 3.18 0.00 42.66 4.40
4876 5869 2.345760 GGGTCAATGCAGGTGCTGG 61.346 63.158 3.18 0.00 42.66 4.85
4890 5883 2.888447 GCTGGCGGATCTAGGGCAT 61.888 63.158 0.00 0.00 38.11 4.40
4910 5903 1.409064 TCGCATCTAGGCTTCATCGTT 59.591 47.619 0.00 0.00 0.00 3.85
4923 5916 3.380479 TCATCGTTCTTGTCCTCGTTT 57.620 42.857 0.00 0.00 0.00 3.60
4924 5917 3.057019 TCATCGTTCTTGTCCTCGTTTG 58.943 45.455 0.00 0.00 0.00 2.93
4926 5919 2.198406 TCGTTCTTGTCCTCGTTTGTG 58.802 47.619 0.00 0.00 0.00 3.33
4938 5931 1.047739 CGTTTGTGAGGTCGACGTAC 58.952 55.000 11.30 9.39 0.00 3.67
4941 5934 0.877071 TTGTGAGGTCGACGTACTCC 59.123 55.000 11.30 6.35 0.00 3.85
4942 5935 0.035881 TGTGAGGTCGACGTACTCCT 59.964 55.000 11.30 0.00 0.00 3.69
4943 5936 0.447011 GTGAGGTCGACGTACTCCTG 59.553 60.000 11.30 0.00 0.00 3.86
4945 5938 1.303074 AGGTCGACGTACTCCTGCA 60.303 57.895 9.40 0.00 0.00 4.41
4950 5943 1.514443 GACGTACTCCTGCACTCGC 60.514 63.158 0.00 0.00 39.24 5.03
4969 5962 3.097921 GCCCATGGGAATGCTTGCC 62.098 63.158 36.00 9.37 42.24 4.52
4972 5965 1.111116 CCATGGGAATGCTTGCCGAT 61.111 55.000 2.85 0.00 45.31 4.18
4993 6000 2.880879 CAGTGATGGGTCGCGTCG 60.881 66.667 5.77 0.00 39.83 5.12
5005 6012 4.530857 GCGTCGGGTGCCTGCTAT 62.531 66.667 0.00 0.00 0.00 2.97
5008 6015 2.124736 TCGGGTGCCTGCTATTGC 60.125 61.111 0.00 0.00 40.20 3.56
5024 6031 2.515523 GCAGCAGGACCATCGCAT 60.516 61.111 0.00 0.00 0.00 4.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.382570 TGAAATTTGAAAGGACAAGGGAAGAA 59.617 34.615 0.00 0.00 0.00 2.52
1 2 5.896678 TGAAATTTGAAAGGACAAGGGAAGA 59.103 36.000 0.00 0.00 0.00 2.87
2 3 6.160576 TGAAATTTGAAAGGACAAGGGAAG 57.839 37.500 0.00 0.00 0.00 3.46
3 4 6.745794 ATGAAATTTGAAAGGACAAGGGAA 57.254 33.333 0.00 0.00 0.00 3.97
4 5 7.010160 ACTATGAAATTTGAAAGGACAAGGGA 58.990 34.615 0.00 0.00 0.00 4.20
5 6 7.092716 CACTATGAAATTTGAAAGGACAAGGG 58.907 38.462 0.00 0.00 0.00 3.95
6 7 7.092716 CCACTATGAAATTTGAAAGGACAAGG 58.907 38.462 0.00 0.00 0.00 3.61
7 8 7.661040 ACCACTATGAAATTTGAAAGGACAAG 58.339 34.615 0.00 0.00 0.00 3.16
8 9 7.595819 ACCACTATGAAATTTGAAAGGACAA 57.404 32.000 0.00 0.00 0.00 3.18
9 10 7.942341 ACTACCACTATGAAATTTGAAAGGACA 59.058 33.333 0.00 0.00 0.00 4.02
10 11 8.336801 ACTACCACTATGAAATTTGAAAGGAC 57.663 34.615 0.00 0.00 0.00 3.85
11 12 8.792633 CAACTACCACTATGAAATTTGAAAGGA 58.207 33.333 0.00 0.00 0.00 3.36
12 13 8.028938 CCAACTACCACTATGAAATTTGAAAGG 58.971 37.037 0.00 0.00 0.00 3.11
13 14 8.028938 CCCAACTACCACTATGAAATTTGAAAG 58.971 37.037 0.00 0.00 0.00 2.62
14 15 7.507616 ACCCAACTACCACTATGAAATTTGAAA 59.492 33.333 0.00 0.00 0.00 2.69
15 16 7.007723 ACCCAACTACCACTATGAAATTTGAA 58.992 34.615 0.00 0.00 0.00 2.69
16 17 6.432783 CACCCAACTACCACTATGAAATTTGA 59.567 38.462 0.00 0.00 0.00 2.69
17 18 6.208599 ACACCCAACTACCACTATGAAATTTG 59.791 38.462 0.00 0.00 0.00 2.32
18 19 6.311735 ACACCCAACTACCACTATGAAATTT 58.688 36.000 0.00 0.00 0.00 1.82
19 20 5.887754 ACACCCAACTACCACTATGAAATT 58.112 37.500 0.00 0.00 0.00 1.82
20 21 5.514500 ACACCCAACTACCACTATGAAAT 57.486 39.130 0.00 0.00 0.00 2.17
21 22 4.986054 ACACCCAACTACCACTATGAAA 57.014 40.909 0.00 0.00 0.00 2.69
22 23 5.486063 ACATACACCCAACTACCACTATGAA 59.514 40.000 0.00 0.00 0.00 2.57
23 24 5.027460 ACATACACCCAACTACCACTATGA 58.973 41.667 0.00 0.00 0.00 2.15
24 25 5.353394 ACATACACCCAACTACCACTATG 57.647 43.478 0.00 0.00 0.00 2.23
25 26 6.614087 ACATACATACACCCAACTACCACTAT 59.386 38.462 0.00 0.00 0.00 2.12
26 27 5.959594 ACATACATACACCCAACTACCACTA 59.040 40.000 0.00 0.00 0.00 2.74
27 28 4.781087 ACATACATACACCCAACTACCACT 59.219 41.667 0.00 0.00 0.00 4.00
28 29 5.093849 ACATACATACACCCAACTACCAC 57.906 43.478 0.00 0.00 0.00 4.16
29 30 7.785985 ACTATACATACATACACCCAACTACCA 59.214 37.037 0.00 0.00 0.00 3.25
30 31 8.186709 ACTATACATACATACACCCAACTACC 57.813 38.462 0.00 0.00 0.00 3.18
31 32 9.075678 AGACTATACATACATACACCCAACTAC 57.924 37.037 0.00 0.00 0.00 2.73
32 33 9.074576 CAGACTATACATACATACACCCAACTA 57.925 37.037 0.00 0.00 0.00 2.24
33 34 7.783119 TCAGACTATACATACATACACCCAACT 59.217 37.037 0.00 0.00 0.00 3.16
34 35 7.948357 TCAGACTATACATACATACACCCAAC 58.052 38.462 0.00 0.00 0.00 3.77
35 36 8.541899 TTCAGACTATACATACATACACCCAA 57.458 34.615 0.00 0.00 0.00 4.12
36 37 8.541899 TTTCAGACTATACATACATACACCCA 57.458 34.615 0.00 0.00 0.00 4.51
37 38 9.826574 TTTTTCAGACTATACATACATACACCC 57.173 33.333 0.00 0.00 0.00 4.61
62 63 6.589907 GCACCAAATTGGATATTCGTCTTTTT 59.410 34.615 20.25 0.00 40.96 1.94
63 64 6.099341 GCACCAAATTGGATATTCGTCTTTT 58.901 36.000 20.25 0.00 40.96 2.27
64 65 5.394115 GGCACCAAATTGGATATTCGTCTTT 60.394 40.000 20.25 0.00 40.96 2.52
65 66 4.097892 GGCACCAAATTGGATATTCGTCTT 59.902 41.667 20.25 0.00 40.96 3.01
66 67 3.632145 GGCACCAAATTGGATATTCGTCT 59.368 43.478 20.25 0.00 40.96 4.18
67 68 3.964909 GGCACCAAATTGGATATTCGTC 58.035 45.455 20.25 0.00 40.96 4.20
84 85 2.171448 AGTTCCATCTAGACATGGGCAC 59.829 50.000 11.65 9.15 43.40 5.01
85 86 2.171237 CAGTTCCATCTAGACATGGGCA 59.829 50.000 11.65 0.00 43.40 5.36
86 87 2.435805 TCAGTTCCATCTAGACATGGGC 59.564 50.000 11.65 6.26 43.40 5.36
87 88 4.346127 TCATCAGTTCCATCTAGACATGGG 59.654 45.833 11.65 4.29 43.40 4.00
88 89 5.541953 TCATCAGTTCCATCTAGACATGG 57.458 43.478 6.08 6.08 44.45 3.66
89 90 6.343703 TGTTCATCAGTTCCATCTAGACATG 58.656 40.000 0.00 0.00 0.00 3.21
90 91 6.550938 TGTTCATCAGTTCCATCTAGACAT 57.449 37.500 0.00 0.00 0.00 3.06
91 92 5.970592 CTGTTCATCAGTTCCATCTAGACA 58.029 41.667 0.00 0.00 39.17 3.41
105 106 3.430333 TTATCGCGCTACTGTTCATCA 57.570 42.857 5.56 0.00 0.00 3.07
106 107 4.772046 TTTTATCGCGCTACTGTTCATC 57.228 40.909 5.56 0.00 0.00 2.92
157 158 8.160521 TGAACTCGAACATCTTCCATTAAAAA 57.839 30.769 0.00 0.00 0.00 1.94
158 159 7.737972 TGAACTCGAACATCTTCCATTAAAA 57.262 32.000 0.00 0.00 0.00 1.52
159 160 7.606073 TCATGAACTCGAACATCTTCCATTAAA 59.394 33.333 0.00 0.00 0.00 1.52
160 161 7.102993 TCATGAACTCGAACATCTTCCATTAA 58.897 34.615 0.00 0.00 0.00 1.40
161 162 6.639563 TCATGAACTCGAACATCTTCCATTA 58.360 36.000 0.00 0.00 0.00 1.90
162 163 5.491070 TCATGAACTCGAACATCTTCCATT 58.509 37.500 0.00 0.00 0.00 3.16
163 164 5.089970 TCATGAACTCGAACATCTTCCAT 57.910 39.130 0.00 0.00 0.00 3.41
164 165 4.535526 TCATGAACTCGAACATCTTCCA 57.464 40.909 0.00 0.00 0.00 3.53
165 166 5.355596 AGATCATGAACTCGAACATCTTCC 58.644 41.667 0.00 0.00 0.00 3.46
166 167 6.509317 GAGATCATGAACTCGAACATCTTC 57.491 41.667 16.18 0.00 0.00 2.87
176 177 2.299993 TGCCACGAGATCATGAACTC 57.700 50.000 20.08 20.08 0.00 3.01
177 178 2.768253 TTGCCACGAGATCATGAACT 57.232 45.000 4.99 4.99 0.00 3.01
178 179 3.829886 TTTTGCCACGAGATCATGAAC 57.170 42.857 0.00 0.00 0.00 3.18
196 197 3.897141 TTTGGCCGGTTTTCTCTTTTT 57.103 38.095 1.90 0.00 0.00 1.94
197 198 3.055747 TGTTTTGGCCGGTTTTCTCTTTT 60.056 39.130 1.90 0.00 0.00 2.27
198 199 2.498078 TGTTTTGGCCGGTTTTCTCTTT 59.502 40.909 1.90 0.00 0.00 2.52
199 200 2.100749 CTGTTTTGGCCGGTTTTCTCTT 59.899 45.455 1.90 0.00 0.00 2.85
200 201 1.681264 CTGTTTTGGCCGGTTTTCTCT 59.319 47.619 1.90 0.00 0.00 3.10
201 202 1.407618 ACTGTTTTGGCCGGTTTTCTC 59.592 47.619 1.90 0.00 0.00 2.87
202 203 1.136110 CACTGTTTTGGCCGGTTTTCT 59.864 47.619 1.90 0.00 0.00 2.52
203 204 1.134936 ACACTGTTTTGGCCGGTTTTC 60.135 47.619 1.90 0.00 0.00 2.29
204 205 0.899019 ACACTGTTTTGGCCGGTTTT 59.101 45.000 1.90 0.00 0.00 2.43
205 206 0.899019 AACACTGTTTTGGCCGGTTT 59.101 45.000 1.90 0.00 0.00 3.27
206 207 0.899019 AAACACTGTTTTGGCCGGTT 59.101 45.000 1.90 0.00 0.00 4.44
207 208 0.174617 CAAACACTGTTTTGGCCGGT 59.825 50.000 1.90 0.00 33.53 5.28
208 209 0.457851 TCAAACACTGTTTTGGCCGG 59.542 50.000 4.30 0.00 37.13 6.13
209 210 2.285827 TTCAAACACTGTTTTGGCCG 57.714 45.000 4.30 0.00 37.13 6.13
210 211 4.944048 ACTATTCAAACACTGTTTTGGCC 58.056 39.130 4.30 0.00 37.13 5.36
211 212 7.995463 TTTACTATTCAAACACTGTTTTGGC 57.005 32.000 4.30 0.00 37.13 4.52
212 213 9.528018 ACATTTACTATTCAAACACTGTTTTGG 57.472 29.630 4.30 0.00 37.13 3.28
217 218 9.772973 TGAGTACATTTACTATTCAAACACTGT 57.227 29.630 0.00 0.00 38.77 3.55
219 220 9.772973 TGTGAGTACATTTACTATTCAAACACT 57.227 29.630 0.00 0.00 38.77 3.55
221 222 9.990360 TCTGTGAGTACATTTACTATTCAAACA 57.010 29.630 0.00 0.00 38.77 2.83
223 224 9.151471 GCTCTGTGAGTACATTTACTATTCAAA 57.849 33.333 0.00 0.00 38.77 2.69
224 225 7.764443 GGCTCTGTGAGTACATTTACTATTCAA 59.236 37.037 0.00 0.00 38.77 2.69
225 226 7.265673 GGCTCTGTGAGTACATTTACTATTCA 58.734 38.462 0.00 0.00 38.77 2.57
226 227 6.418226 CGGCTCTGTGAGTACATTTACTATTC 59.582 42.308 0.00 0.00 38.77 1.75
227 228 6.096423 TCGGCTCTGTGAGTACATTTACTATT 59.904 38.462 0.00 0.00 38.77 1.73
228 229 5.593095 TCGGCTCTGTGAGTACATTTACTAT 59.407 40.000 0.00 0.00 38.77 2.12
229 230 4.945543 TCGGCTCTGTGAGTACATTTACTA 59.054 41.667 0.00 0.00 38.77 1.82
230 231 3.762288 TCGGCTCTGTGAGTACATTTACT 59.238 43.478 0.00 0.00 41.59 2.24
231 232 4.106029 TCGGCTCTGTGAGTACATTTAC 57.894 45.455 0.00 0.00 35.97 2.01
232 233 3.762288 ACTCGGCTCTGTGAGTACATTTA 59.238 43.478 0.00 0.00 43.36 1.40
233 234 2.563179 ACTCGGCTCTGTGAGTACATTT 59.437 45.455 0.00 0.00 43.36 2.32
234 235 2.171840 ACTCGGCTCTGTGAGTACATT 58.828 47.619 0.00 0.00 43.36 2.71
235 236 1.840737 ACTCGGCTCTGTGAGTACAT 58.159 50.000 0.00 0.00 43.36 2.29
236 237 1.617322 AACTCGGCTCTGTGAGTACA 58.383 50.000 0.00 0.00 44.36 2.90
237 238 2.726832 AAACTCGGCTCTGTGAGTAC 57.273 50.000 0.00 0.00 44.36 2.73
238 239 4.280174 AGTTAAAACTCGGCTCTGTGAGTA 59.720 41.667 0.00 0.00 44.36 2.59
239 240 3.069729 AGTTAAAACTCGGCTCTGTGAGT 59.930 43.478 0.00 0.00 46.98 3.41
240 241 3.654414 AGTTAAAACTCGGCTCTGTGAG 58.346 45.455 0.00 0.00 32.86 3.51
241 242 3.746045 AGTTAAAACTCGGCTCTGTGA 57.254 42.857 0.00 0.00 32.86 3.58
242 243 4.813296 AAAGTTAAAACTCGGCTCTGTG 57.187 40.909 0.00 0.00 38.57 3.66
243 244 5.830000 AAAAAGTTAAAACTCGGCTCTGT 57.170 34.783 0.00 0.00 38.57 3.41
262 263 1.827315 CGAGGAGTGCGCGACAAAAA 61.827 55.000 12.10 0.00 0.00 1.94
263 264 2.307309 CGAGGAGTGCGCGACAAAA 61.307 57.895 12.10 0.00 0.00 2.44
264 265 2.686956 TTCGAGGAGTGCGCGACAAA 62.687 55.000 12.10 0.00 33.33 2.83
265 266 2.486636 ATTCGAGGAGTGCGCGACAA 62.487 55.000 12.10 0.00 33.33 3.18
266 267 2.989881 ATTCGAGGAGTGCGCGACA 61.990 57.895 12.10 4.31 33.33 4.35
267 268 2.202623 ATTCGAGGAGTGCGCGAC 60.203 61.111 12.10 5.29 33.33 5.19
268 269 2.202610 CATTCGAGGAGTGCGCGA 60.203 61.111 12.10 6.35 0.00 5.87
269 270 2.507102 ACATTCGAGGAGTGCGCG 60.507 61.111 0.00 0.00 0.00 6.86
270 271 1.014044 TTGACATTCGAGGAGTGCGC 61.014 55.000 0.00 0.00 0.00 6.09
271 272 1.428448 TTTGACATTCGAGGAGTGCG 58.572 50.000 0.00 0.00 0.00 5.34
272 273 2.808543 AGTTTTGACATTCGAGGAGTGC 59.191 45.455 0.00 0.00 0.00 4.40
273 274 4.310769 AGAGTTTTGACATTCGAGGAGTG 58.689 43.478 0.00 0.00 0.00 3.51
274 275 4.608948 AGAGTTTTGACATTCGAGGAGT 57.391 40.909 0.00 0.00 0.00 3.85
275 276 4.865365 GGTAGAGTTTTGACATTCGAGGAG 59.135 45.833 0.00 0.00 0.00 3.69
276 277 4.282449 TGGTAGAGTTTTGACATTCGAGGA 59.718 41.667 0.00 0.00 0.00 3.71
277 278 4.566004 TGGTAGAGTTTTGACATTCGAGG 58.434 43.478 0.00 0.00 0.00 4.63
278 279 6.539649 TTTGGTAGAGTTTTGACATTCGAG 57.460 37.500 0.00 0.00 0.00 4.04
279 280 6.928979 TTTTGGTAGAGTTTTGACATTCGA 57.071 33.333 0.00 0.00 0.00 3.71
280 281 8.479280 CAAATTTTGGTAGAGTTTTGACATTCG 58.521 33.333 0.97 0.00 0.00 3.34
281 282 8.275632 GCAAATTTTGGTAGAGTTTTGACATTC 58.724 33.333 10.96 0.00 0.00 2.67
282 283 7.768120 TGCAAATTTTGGTAGAGTTTTGACATT 59.232 29.630 10.96 0.00 0.00 2.71
283 284 7.224557 GTGCAAATTTTGGTAGAGTTTTGACAT 59.775 33.333 10.96 0.00 0.00 3.06
284 285 6.533367 GTGCAAATTTTGGTAGAGTTTTGACA 59.467 34.615 10.96 0.00 0.00 3.58
285 286 6.291585 CGTGCAAATTTTGGTAGAGTTTTGAC 60.292 38.462 10.96 0.00 0.00 3.18
286 287 5.746245 CGTGCAAATTTTGGTAGAGTTTTGA 59.254 36.000 10.96 0.00 0.00 2.69
287 288 5.746245 TCGTGCAAATTTTGGTAGAGTTTTG 59.254 36.000 10.96 0.00 0.00 2.44
288 289 5.897050 TCGTGCAAATTTTGGTAGAGTTTT 58.103 33.333 10.96 0.00 0.00 2.43
289 290 5.508200 TCGTGCAAATTTTGGTAGAGTTT 57.492 34.783 10.96 0.00 0.00 2.66
290 291 5.298276 TCTTCGTGCAAATTTTGGTAGAGTT 59.702 36.000 10.96 0.00 0.00 3.01
291 292 4.819630 TCTTCGTGCAAATTTTGGTAGAGT 59.180 37.500 10.96 0.00 0.00 3.24
292 293 5.356882 TCTTCGTGCAAATTTTGGTAGAG 57.643 39.130 10.96 0.00 0.00 2.43
293 294 5.471797 TGATCTTCGTGCAAATTTTGGTAGA 59.528 36.000 10.96 4.09 0.00 2.59
294 295 5.569059 GTGATCTTCGTGCAAATTTTGGTAG 59.431 40.000 10.96 0.00 0.00 3.18
295 296 5.457140 GTGATCTTCGTGCAAATTTTGGTA 58.543 37.500 10.96 0.00 0.00 3.25
296 297 4.298332 GTGATCTTCGTGCAAATTTTGGT 58.702 39.130 10.96 0.00 0.00 3.67
297 298 3.361644 CGTGATCTTCGTGCAAATTTTGG 59.638 43.478 10.96 0.00 0.00 3.28
298 299 3.181550 GCGTGATCTTCGTGCAAATTTTG 60.182 43.478 4.72 4.72 0.00 2.44
299 300 2.979813 GCGTGATCTTCGTGCAAATTTT 59.020 40.909 11.15 0.00 0.00 1.82
300 301 2.031245 TGCGTGATCTTCGTGCAAATTT 60.031 40.909 11.15 0.00 31.69 1.82
301 302 1.535028 TGCGTGATCTTCGTGCAAATT 59.465 42.857 11.15 0.00 31.69 1.82
302 303 1.135972 GTGCGTGATCTTCGTGCAAAT 60.136 47.619 11.15 0.00 37.30 2.32
303 304 0.234625 GTGCGTGATCTTCGTGCAAA 59.765 50.000 11.15 0.00 37.30 3.68
304 305 0.878086 TGTGCGTGATCTTCGTGCAA 60.878 50.000 11.15 0.00 37.30 4.08
305 306 1.300542 TGTGCGTGATCTTCGTGCA 60.301 52.632 11.15 0.00 0.00 4.57
306 307 1.130613 GTGTGCGTGATCTTCGTGC 59.869 57.895 11.15 1.75 0.00 5.34
307 308 1.070821 ATGTGTGCGTGATCTTCGTG 58.929 50.000 11.15 0.00 0.00 4.35
308 309 1.070821 CATGTGTGCGTGATCTTCGT 58.929 50.000 11.15 0.00 33.58 3.85
309 310 0.247419 GCATGTGTGCGTGATCTTCG 60.247 55.000 0.00 0.21 42.28 3.79
310 311 3.593247 GCATGTGTGCGTGATCTTC 57.407 52.632 0.00 0.00 42.28 2.87
320 321 2.470196 GCAAGCTAGATGCATGTGTG 57.530 50.000 2.46 0.00 45.94 3.82
327 328 6.453396 CGATTTTTCTTTTGCAAGCTAGATGC 60.453 38.462 12.56 12.56 44.08 3.91
328 329 6.034256 CCGATTTTTCTTTTGCAAGCTAGATG 59.966 38.462 0.00 0.00 0.00 2.90
329 330 6.071952 TCCGATTTTTCTTTTGCAAGCTAGAT 60.072 34.615 0.00 0.00 0.00 1.98
330 331 5.240623 TCCGATTTTTCTTTTGCAAGCTAGA 59.759 36.000 0.00 1.56 0.00 2.43
331 332 5.460646 TCCGATTTTTCTTTTGCAAGCTAG 58.539 37.500 0.00 0.00 0.00 3.42
332 333 5.446143 TCCGATTTTTCTTTTGCAAGCTA 57.554 34.783 0.00 0.00 0.00 3.32
333 334 4.320608 TCCGATTTTTCTTTTGCAAGCT 57.679 36.364 0.00 0.00 0.00 3.74
334 335 5.596268 AATCCGATTTTTCTTTTGCAAGC 57.404 34.783 0.00 0.00 0.00 4.01
415 416 4.373116 CCCTCACCGGTCACCACG 62.373 72.222 2.59 0.00 0.00 4.94
416 417 2.240162 GATCCCTCACCGGTCACCAC 62.240 65.000 2.59 0.00 0.00 4.16
417 418 1.987855 GATCCCTCACCGGTCACCA 60.988 63.158 2.59 0.00 0.00 4.17
418 419 1.987855 TGATCCCTCACCGGTCACC 60.988 63.158 2.59 0.00 0.00 4.02
419 420 1.218316 GTGATCCCTCACCGGTCAC 59.782 63.158 2.59 3.99 45.06 3.67
420 421 3.708210 GTGATCCCTCACCGGTCA 58.292 61.111 2.59 0.00 45.06 4.02
426 427 0.813184 TTACCGACGTGATCCCTCAC 59.187 55.000 0.00 0.00 46.89 3.51
427 428 1.548081 TTTACCGACGTGATCCCTCA 58.452 50.000 0.00 0.00 0.00 3.86
428 429 2.545322 GGATTTACCGACGTGATCCCTC 60.545 54.545 0.00 0.00 0.00 4.30
429 430 1.411612 GGATTTACCGACGTGATCCCT 59.588 52.381 0.00 0.00 0.00 4.20
430 431 1.539712 GGGATTTACCGACGTGATCCC 60.540 57.143 15.01 15.01 40.11 3.85
431 432 1.411612 AGGGATTTACCGACGTGATCC 59.588 52.381 0.00 1.19 40.11 3.36
432 433 2.361438 AGAGGGATTTACCGACGTGATC 59.639 50.000 0.00 0.00 40.11 2.92
433 434 2.385803 AGAGGGATTTACCGACGTGAT 58.614 47.619 0.00 0.00 40.11 3.06
434 435 1.843368 AGAGGGATTTACCGACGTGA 58.157 50.000 0.00 0.00 40.11 4.35
435 436 2.094390 TCAAGAGGGATTTACCGACGTG 60.094 50.000 0.00 0.00 40.11 4.49
436 437 2.094338 GTCAAGAGGGATTTACCGACGT 60.094 50.000 0.00 0.00 40.11 4.34
437 438 2.165845 AGTCAAGAGGGATTTACCGACG 59.834 50.000 0.00 0.00 40.11 5.12
438 439 3.522553 CAGTCAAGAGGGATTTACCGAC 58.477 50.000 0.00 0.00 40.11 4.79
439 440 2.500098 CCAGTCAAGAGGGATTTACCGA 59.500 50.000 0.00 0.00 40.11 4.69
440 441 2.500098 TCCAGTCAAGAGGGATTTACCG 59.500 50.000 0.00 0.00 40.11 4.02
441 442 3.519913 AGTCCAGTCAAGAGGGATTTACC 59.480 47.826 0.00 0.00 32.43 2.85
442 443 4.383226 GGAGTCCAGTCAAGAGGGATTTAC 60.383 50.000 3.60 0.00 32.43 2.01
443 444 3.775316 GGAGTCCAGTCAAGAGGGATTTA 59.225 47.826 3.60 0.00 32.43 1.40
444 445 2.573915 GGAGTCCAGTCAAGAGGGATTT 59.426 50.000 3.60 0.00 32.43 2.17
445 446 2.192263 GGAGTCCAGTCAAGAGGGATT 58.808 52.381 3.60 0.00 32.43 3.01
446 447 1.623834 GGGAGTCCAGTCAAGAGGGAT 60.624 57.143 12.30 0.00 32.43 3.85
447 448 0.252284 GGGAGTCCAGTCAAGAGGGA 60.252 60.000 12.30 0.00 0.00 4.20
448 449 1.608717 CGGGAGTCCAGTCAAGAGGG 61.609 65.000 12.30 0.00 0.00 4.30
449 450 1.608717 CCGGGAGTCCAGTCAAGAGG 61.609 65.000 12.30 0.00 0.00 3.69
450 451 0.612174 TCCGGGAGTCCAGTCAAGAG 60.612 60.000 12.30 0.00 0.00 2.85
451 452 0.898789 GTCCGGGAGTCCAGTCAAGA 60.899 60.000 12.30 0.00 0.00 3.02
452 453 1.592223 GTCCGGGAGTCCAGTCAAG 59.408 63.158 12.30 0.00 0.00 3.02
453 454 1.911766 GGTCCGGGAGTCCAGTCAA 60.912 63.158 12.30 0.00 0.00 3.18
548 564 2.762234 CCCGACTCGAGTCTTCCCG 61.762 68.421 35.60 25.29 42.66 5.14
550 566 1.015868 CTACCCGACTCGAGTCTTCC 58.984 60.000 35.60 16.51 42.66 3.46
551 567 1.935199 CTCTACCCGACTCGAGTCTTC 59.065 57.143 35.60 16.85 42.66 2.87
552 568 1.554160 TCTCTACCCGACTCGAGTCTT 59.446 52.381 35.60 24.18 42.66 3.01
553 569 1.193323 TCTCTACCCGACTCGAGTCT 58.807 55.000 35.60 23.38 42.66 3.24
554 570 2.137523 GATCTCTACCCGACTCGAGTC 58.862 57.143 31.46 31.46 41.47 3.36
555 571 1.538634 CGATCTCTACCCGACTCGAGT 60.539 57.143 20.18 20.18 0.00 4.18
556 572 1.141645 CGATCTCTACCCGACTCGAG 58.858 60.000 11.84 11.84 0.00 4.04
557 573 0.749049 TCGATCTCTACCCGACTCGA 59.251 55.000 0.00 0.00 33.23 4.04
558 574 1.141645 CTCGATCTCTACCCGACTCG 58.858 60.000 0.00 0.00 0.00 4.18
559 575 2.137523 GTCTCGATCTCTACCCGACTC 58.862 57.143 0.00 0.00 0.00 3.36
560 576 1.764134 AGTCTCGATCTCTACCCGACT 59.236 52.381 0.00 0.00 0.00 4.18
561 577 1.868498 CAGTCTCGATCTCTACCCGAC 59.132 57.143 0.00 0.00 0.00 4.79
562 578 1.810794 GCAGTCTCGATCTCTACCCGA 60.811 57.143 0.00 0.00 0.00 5.14
563 579 0.589223 GCAGTCTCGATCTCTACCCG 59.411 60.000 0.00 0.00 0.00 5.28
564 580 0.955905 GGCAGTCTCGATCTCTACCC 59.044 60.000 0.00 0.00 0.00 3.69
565 581 1.335496 GTGGCAGTCTCGATCTCTACC 59.665 57.143 0.00 0.00 0.00 3.18
566 582 1.003331 CGTGGCAGTCTCGATCTCTAC 60.003 57.143 0.00 0.00 34.65 2.59
669 685 4.123545 GGGGTTCGGGTGGATGGG 62.124 72.222 0.00 0.00 0.00 4.00
787 827 2.408565 GGAGAGAGGAGAGAGGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
800 840 2.242196 ACTTGGAGAGAGAGGGAGAGAG 59.758 54.545 0.00 0.00 0.00 3.20
801 841 2.241176 GACTTGGAGAGAGAGGGAGAGA 59.759 54.545 0.00 0.00 0.00 3.10
802 842 2.654863 GACTTGGAGAGAGAGGGAGAG 58.345 57.143 0.00 0.00 0.00 3.20
803 843 1.286553 GGACTTGGAGAGAGAGGGAGA 59.713 57.143 0.00 0.00 0.00 3.71
804 844 1.687996 GGGACTTGGAGAGAGAGGGAG 60.688 61.905 0.00 0.00 0.00 4.30
805 845 0.336737 GGGACTTGGAGAGAGAGGGA 59.663 60.000 0.00 0.00 0.00 4.20
806 846 0.041833 TGGGACTTGGAGAGAGAGGG 59.958 60.000 0.00 0.00 0.00 4.30
808 848 3.102972 TGATTGGGACTTGGAGAGAGAG 58.897 50.000 0.00 0.00 0.00 3.20
809 849 3.190383 TGATTGGGACTTGGAGAGAGA 57.810 47.619 0.00 0.00 0.00 3.10
810 850 4.500499 AATGATTGGGACTTGGAGAGAG 57.500 45.455 0.00 0.00 0.00 3.20
811 851 4.164221 GGTAATGATTGGGACTTGGAGAGA 59.836 45.833 0.00 0.00 0.00 3.10
812 852 4.455606 GGTAATGATTGGGACTTGGAGAG 58.544 47.826 0.00 0.00 0.00 3.20
813 853 3.202151 GGGTAATGATTGGGACTTGGAGA 59.798 47.826 0.00 0.00 0.00 3.71
814 854 3.555966 GGGTAATGATTGGGACTTGGAG 58.444 50.000 0.00 0.00 0.00 3.86
815 855 2.243736 GGGGTAATGATTGGGACTTGGA 59.756 50.000 0.00 0.00 0.00 3.53
879 929 2.753931 CTTTCTGGTTGCGGGCTTGC 62.754 60.000 0.00 0.00 0.00 4.01
880 930 1.286880 CTTTCTGGTTGCGGGCTTG 59.713 57.895 0.00 0.00 0.00 4.01
881 931 2.564721 GCTTTCTGGTTGCGGGCTT 61.565 57.895 0.00 0.00 0.00 4.35
882 932 2.985847 GCTTTCTGGTTGCGGGCT 60.986 61.111 0.00 0.00 0.00 5.19
883 933 2.855514 TTGCTTTCTGGTTGCGGGC 61.856 57.895 0.00 0.00 0.00 6.13
884 934 1.007387 GTTGCTTTCTGGTTGCGGG 60.007 57.895 0.00 0.00 0.00 6.13
885 935 0.102120 TTGTTGCTTTCTGGTTGCGG 59.898 50.000 0.00 0.00 0.00 5.69
886 936 1.199624 GTTGTTGCTTTCTGGTTGCG 58.800 50.000 0.00 0.00 0.00 4.85
887 937 2.292103 TGTTGTTGCTTTCTGGTTGC 57.708 45.000 0.00 0.00 0.00 4.17
888 938 3.383761 GGATGTTGTTGCTTTCTGGTTG 58.616 45.455 0.00 0.00 0.00 3.77
977 1036 3.398134 CGATCGATCGGCCGCAAG 61.398 66.667 34.54 13.87 45.93 4.01
988 1047 4.923710 CGCCATGACGCCGATCGA 62.924 66.667 18.66 0.00 41.67 3.59
1897 2441 1.975363 GCACAGAACCGCTCATCAGC 61.975 60.000 0.00 0.00 42.96 4.26
1904 2448 3.832490 TCCATATATAGCACAGAACCGCT 59.168 43.478 0.00 0.00 42.34 5.52
1955 2500 0.886490 ACGGCTCTCAAACCAGCAAG 60.886 55.000 0.00 0.00 37.38 4.01
2039 2584 5.914898 TGCAGCACTACTAAACTCTGATA 57.085 39.130 0.00 0.00 0.00 2.15
2105 2650 3.678662 GCAAAAAGCGCATGAAAACAAA 58.321 36.364 11.47 0.00 0.00 2.83
2134 2679 5.664294 AGCTATTCAGATCATAGGAGCAG 57.336 43.478 10.38 0.00 0.00 4.24
2181 2726 7.980099 CGGACATACTTAAGTTTCAAGAGGTAT 59.020 37.037 14.49 0.00 0.00 2.73
2184 2729 6.164176 ACGGACATACTTAAGTTTCAAGAGG 58.836 40.000 14.49 0.00 0.00 3.69
2206 2752 2.421424 ACTCAAGGCGGTACTACTAACG 59.579 50.000 0.00 0.00 36.04 3.18
2306 2852 7.466746 AGTAGAAACCACAACATTATGCATT 57.533 32.000 3.54 0.00 0.00 3.56
2359 2905 6.855763 ATGACTTCCATATGATCTCTCTCC 57.144 41.667 3.65 0.00 32.72 3.71
2386 2932 4.568072 TGCTAAATCTGGGACAAGCTTA 57.432 40.909 0.00 0.00 38.70 3.09
2398 2944 1.542108 GCCCGCAGAGATGCTAAATCT 60.542 52.381 0.00 0.00 0.00 2.40
2419 2965 0.246635 TGTAAGAAGGGCAGAGCGTC 59.753 55.000 0.00 0.00 0.00 5.19
2556 3105 8.092068 TCAGTTCCACGACAGAAATTAGATTAA 58.908 33.333 0.00 0.00 0.00 1.40
2572 3121 8.687824 AAATTAGCATAAAAATCAGTTCCACG 57.312 30.769 0.00 0.00 0.00 4.94
2575 3124 9.860898 ACTGAAATTAGCATAAAAATCAGTTCC 57.139 29.630 0.00 0.00 42.47 3.62
2713 3294 6.833416 AGTGCCAACAATAGCAATAATAGGAA 59.167 34.615 0.00 0.00 41.48 3.36
2789 3370 5.550232 TGCATTCACTGTCATCAATACAC 57.450 39.130 0.00 0.00 0.00 2.90
2840 3423 4.515028 ATTTGCTGAATGAGATGGGAGA 57.485 40.909 0.00 0.00 0.00 3.71
2841 3424 6.704289 TTTATTTGCTGAATGAGATGGGAG 57.296 37.500 0.00 0.00 0.00 4.30
2842 3425 8.000709 AGTATTTATTTGCTGAATGAGATGGGA 58.999 33.333 0.00 0.00 0.00 4.37
2843 3426 8.174733 AGTATTTATTTGCTGAATGAGATGGG 57.825 34.615 0.00 0.00 0.00 4.00
2847 3432 9.890629 ACACTAGTATTTATTTGCTGAATGAGA 57.109 29.630 0.00 0.00 0.00 3.27
2875 3504 7.656137 TCTGTCCCATAATATAAGAGCGTTTTC 59.344 37.037 0.00 0.00 0.00 2.29
2881 3510 5.721960 TCCCTCTGTCCCATAATATAAGAGC 59.278 44.000 0.00 0.00 0.00 4.09
2882 3511 6.957020 ACTCCCTCTGTCCCATAATATAAGAG 59.043 42.308 0.00 0.00 0.00 2.85
2888 3517 5.942977 TCTACTCCCTCTGTCCCATAATA 57.057 43.478 0.00 0.00 0.00 0.98
2899 3528 5.102609 TCCCAGGATAAATTCTACTCCCTCT 60.103 44.000 0.00 0.00 0.00 3.69
2928 3557 8.230486 GTCAGTATTCAGTAACCACTTTTGATG 58.770 37.037 0.00 0.00 30.46 3.07
2931 3560 7.490962 TGTCAGTATTCAGTAACCACTTTTG 57.509 36.000 0.00 0.00 30.46 2.44
3026 3662 6.558488 TTAATGAAGGGGATTCCAAATTGG 57.442 37.500 5.48 5.48 37.08 3.16
3246 4108 6.950842 AGACATCATTTGAGTGAACTATCCA 58.049 36.000 0.00 0.00 0.00 3.41
3247 4109 7.856145 AAGACATCATTTGAGTGAACTATCC 57.144 36.000 0.00 0.00 0.00 2.59
3253 4115 7.828717 TGGCTAATAAGACATCATTTGAGTGAA 59.171 33.333 0.00 0.00 35.10 3.18
3259 4121 6.204359 GTGCTGGCTAATAAGACATCATTTG 58.796 40.000 0.00 0.00 41.02 2.32
3299 4161 0.250038 ACACTGGCACACTGCTACTG 60.250 55.000 0.00 0.00 44.28 2.74
3354 4216 3.694043 AAACATGGCATAAAACCACCC 57.306 42.857 0.00 0.00 40.82 4.61
3381 4243 4.310769 ACAAAGAGAAGAATGACACGAGG 58.689 43.478 0.00 0.00 0.00 4.63
3413 4275 7.653713 TCTTCATCTTCAACACTTCAGTCTAAC 59.346 37.037 0.00 0.00 0.00 2.34
3435 4297 8.186821 AGCTCAGCACATTATTATTGTTTCTTC 58.813 33.333 0.00 0.00 0.00 2.87
3453 4315 0.746063 CCCAAAAACACAGCTCAGCA 59.254 50.000 0.00 0.00 0.00 4.41
3513 4377 3.943671 TTCTGGGTGTCTTCCTGAAAA 57.056 42.857 0.00 0.00 38.63 2.29
3525 4389 2.624838 AGAAACTTGCACATTCTGGGTG 59.375 45.455 6.95 0.00 39.25 4.61
3654 4518 1.014044 TGCTTTGCTCGGATCGTGTC 61.014 55.000 0.00 0.00 0.00 3.67
4035 4899 6.250315 CGATCTCTTATTATTGCTAGCTGTCG 59.750 42.308 17.23 4.29 0.00 4.35
4057 4921 1.475751 GCCATGGAGATCAACCACGAT 60.476 52.381 18.40 0.00 40.36 3.73
4060 4924 2.019984 GAAGCCATGGAGATCAACCAC 58.980 52.381 18.40 0.00 40.36 4.16
4062 4926 1.303309 CGAAGCCATGGAGATCAACC 58.697 55.000 18.40 0.00 0.00 3.77
4245 5114 2.014857 CTCACACTTGCCAGATCCATG 58.985 52.381 0.00 0.00 0.00 3.66
4299 5168 7.410800 AACATGAAAAACAGTATGCAACATG 57.589 32.000 0.00 0.00 42.53 3.21
4323 5192 1.228429 CCGACCAGAAAAGGCCCAA 60.228 57.895 0.00 0.00 0.00 4.12
4325 5194 0.826256 AAACCGACCAGAAAAGGCCC 60.826 55.000 0.00 0.00 0.00 5.80
4329 5198 3.202906 TCTCACAAACCGACCAGAAAAG 58.797 45.455 0.00 0.00 0.00 2.27
4339 5208 5.007626 TGAACTCAAGAATTCTCACAAACCG 59.992 40.000 8.78 0.00 0.00 4.44
4357 5226 5.880887 CCCCAGTTTACCTATTTCTGAACTC 59.119 44.000 0.00 0.00 0.00 3.01
4372 5241 2.334977 TGAGCAACTCTCCCCAGTTTA 58.665 47.619 0.00 0.00 41.18 2.01
4456 5325 7.201875 GGGTTGGTTCTCTTTTGTTATGAAAGA 60.202 37.037 0.00 0.00 39.95 2.52
4457 5326 6.923508 GGGTTGGTTCTCTTTTGTTATGAAAG 59.076 38.462 0.00 0.00 35.85 2.62
4458 5327 6.609616 AGGGTTGGTTCTCTTTTGTTATGAAA 59.390 34.615 0.00 0.00 0.00 2.69
4475 5344 6.855061 TGAGGAAATATATAGGAAGGGTTGGT 59.145 38.462 0.00 0.00 0.00 3.67
4554 5544 7.880195 ACATAGTTTGTCTAGATGCTGTCTTTT 59.120 33.333 0.00 0.00 34.07 2.27
4583 5573 2.887783 TGGCCTAATTTCGCAGTTTTCA 59.112 40.909 3.32 0.00 0.00 2.69
4584 5574 3.569250 TGGCCTAATTTCGCAGTTTTC 57.431 42.857 3.32 0.00 0.00 2.29
4597 5587 1.669760 CGCGTTGGAGTTGGCCTAA 60.670 57.895 3.32 0.00 0.00 2.69
4617 5607 1.039856 AAAATGCATCCGTATGGCCC 58.960 50.000 0.00 0.00 33.38 5.80
4648 5638 0.684805 ACTGGCCACCCAAACGAAAA 60.685 50.000 0.00 0.00 41.58 2.29
4651 5641 2.112297 GACTGGCCACCCAAACGA 59.888 61.111 0.00 0.00 41.58 3.85
4652 5642 3.353836 CGACTGGCCACCCAAACG 61.354 66.667 0.00 0.00 41.58 3.60
4653 5643 1.966451 CTCGACTGGCCACCCAAAC 60.966 63.158 0.00 0.00 41.58 2.93
4656 5646 2.435120 TAGACTCGACTGGCCACCCA 62.435 60.000 0.00 0.00 39.32 4.51
4657 5647 1.043673 ATAGACTCGACTGGCCACCC 61.044 60.000 0.00 0.00 0.00 4.61
4659 5649 0.386113 GGATAGACTCGACTGGCCAC 59.614 60.000 0.00 0.00 0.00 5.01
4660 5650 0.259065 AGGATAGACTCGACTGGCCA 59.741 55.000 4.71 4.71 0.00 5.36
4696 5686 4.988598 CACGTTGGGCTCACCGCT 62.989 66.667 2.31 0.00 44.64 5.52
4720 5710 1.574134 CATCCGCAAATTTGGGATGC 58.426 50.000 32.73 17.74 42.95 3.91
4788 5778 5.104735 AGTGGACTTTGGCCAACATTTTAAA 60.105 36.000 20.35 0.00 37.12 1.52
4861 5854 3.057548 CGCCAGCACCTGCATTGA 61.058 61.111 0.00 0.00 45.16 2.57
4863 5856 3.650298 ATCCGCCAGCACCTGCATT 62.650 57.895 0.00 0.00 45.16 3.56
4864 5857 4.119363 ATCCGCCAGCACCTGCAT 62.119 61.111 0.00 0.00 45.16 3.96
4866 5859 2.985512 CTAGATCCGCCAGCACCTGC 62.986 65.000 0.00 0.00 42.49 4.85
4871 5864 3.550431 GCCCTAGATCCGCCAGCA 61.550 66.667 0.00 0.00 0.00 4.41
4874 5867 2.574018 CGATGCCCTAGATCCGCCA 61.574 63.158 0.00 0.00 0.00 5.69
4876 5869 2.433318 GCGATGCCCTAGATCCGC 60.433 66.667 0.00 0.00 0.00 5.54
4890 5883 1.032794 ACGATGAAGCCTAGATGCGA 58.967 50.000 0.00 0.00 36.02 5.10
4923 5916 0.035881 AGGAGTACGTCGACCTCACA 59.964 55.000 18.19 0.00 0.00 3.58
4924 5917 0.447011 CAGGAGTACGTCGACCTCAC 59.553 60.000 18.19 10.57 0.00 3.51
4926 5919 1.303799 TGCAGGAGTACGTCGACCTC 61.304 60.000 10.58 10.68 0.00 3.85
4931 5924 1.226046 CGAGTGCAGGAGTACGTCG 60.226 63.158 0.00 0.00 35.31 5.12
4945 5938 3.797353 ATTCCCATGGGCGCGAGT 61.797 61.111 27.41 2.17 34.68 4.18
4950 5943 2.809706 CAAGCATTCCCATGGGCG 59.190 61.111 27.41 17.34 34.68 6.13
4956 5949 0.179020 CCTATCGGCAAGCATTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
4969 5962 0.319040 CGACCCATCACTGCCTATCG 60.319 60.000 0.00 0.00 0.00 2.92
4972 5965 2.900273 GCGACCCATCACTGCCTA 59.100 61.111 0.00 0.00 0.00 3.93
5005 6012 2.747460 GCGATGGTCCTGCTGCAA 60.747 61.111 3.02 0.00 0.00 4.08
5008 6015 2.831366 GCATGCGATGGTCCTGCTG 61.831 63.158 0.00 0.00 0.00 4.41
5009 6016 2.515523 GCATGCGATGGTCCTGCT 60.516 61.111 0.00 0.00 0.00 4.24
5011 6018 2.184830 CCAGCATGCGATGGTCCTG 61.185 63.158 16.05 5.22 44.08 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.