Multiple sequence alignment - TraesCS7B01G036900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G036900 chr7B 100.000 4746 0 0 1 4746 35666500 35671245 0.000000e+00 8765.0
1 TraesCS7B01G036900 chr7B 88.889 279 26 5 1 277 357968439 357968714 5.880000e-89 339.0
2 TraesCS7B01G036900 chr7B 89.338 272 24 4 1 270 135039894 135040162 2.120000e-88 337.0
3 TraesCS7B01G036900 chr7B 81.609 435 50 23 12 434 371450618 371451034 2.740000e-87 333.0
4 TraesCS7B01G036900 chr7B 87.143 280 27 7 1 277 568429945 568429672 4.610000e-80 309.0
5 TraesCS7B01G036900 chr7B 100.000 29 0 0 539 567 35666958 35666986 2.000000e-03 54.7
6 TraesCS7B01G036900 chr7B 100.000 29 0 0 459 487 35667038 35667066 2.000000e-03 54.7
7 TraesCS7B01G036900 chr7A 94.333 3988 142 43 809 4746 88809768 88813721 0.000000e+00 6035.0
8 TraesCS7B01G036900 chr7D 94.945 3086 125 21 1679 4746 87228118 87231190 0.000000e+00 4806.0
9 TraesCS7B01G036900 chr7D 94.617 966 41 5 722 1683 87227081 87228039 0.000000e+00 1485.0
10 TraesCS7B01G036900 chr2D 85.301 449 37 17 1 426 483839974 483840416 2.030000e-118 436.0
11 TraesCS7B01G036900 chr6B 82.430 461 49 17 1 435 195967933 195968387 1.610000e-99 374.0
12 TraesCS7B01G036900 chr6B 84.887 311 27 16 1 301 398468769 398468469 3.590000e-76 296.0
13 TraesCS7B01G036900 chr2A 94.872 39 1 1 631 669 768989448 768989411 5.130000e-05 60.2
14 TraesCS7B01G036900 chrUn 100.000 29 0 0 639 667 117311469 117311497 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G036900 chr7B 35666500 35671245 4745 False 8765.0 8765 100.000 1 4746 1 chr7B.!!$F1 4745
1 TraesCS7B01G036900 chr7A 88809768 88813721 3953 False 6035.0 6035 94.333 809 4746 1 chr7A.!!$F1 3937
2 TraesCS7B01G036900 chr7D 87227081 87231190 4109 False 3145.5 4806 94.781 722 4746 2 chr7D.!!$F1 4024

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
540 541 0.034756 TAGGTGCGCACACTTCATGT 59.965 50.000 38.60 15.94 46.57 3.21 F
565 566 0.104304 CGGGTTCGATTCCCAGTAGG 59.896 60.000 21.03 5.65 44.81 3.18 F
774 775 0.108472 GCTGCTCATTGGGCCTTTTC 60.108 55.000 5.96 0.00 0.00 2.29 F
1376 1381 0.668535 GGTTTTGCTCGCCTGTTCTT 59.331 50.000 0.00 0.00 0.00 2.52 F
1755 1847 0.908910 TCGGCAGGAGGAATGCTAAA 59.091 50.000 0.00 0.00 43.35 1.85 F
1790 1882 1.349026 ACTGCAGCCTTCTTTGCTCTA 59.651 47.619 15.27 0.00 40.87 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1809 1902 0.179097 GCTCTAGGTCCAAAGGCTCG 60.179 60.000 0.00 0.00 0.00 5.03 R
2197 2296 1.065551 GTTGCCTCAAACACACCAGAC 59.934 52.381 0.00 0.00 0.00 3.51 R
2203 2302 2.997980 TCTGAAGTTGCCTCAAACACA 58.002 42.857 0.00 0.00 32.21 3.72 R
3178 3280 0.032130 CATTGATGATGCTGCCTGGC 59.968 55.000 12.87 12.87 0.00 4.85 R
3660 3762 1.023513 GCCGAAGCAGCTCTTGACAT 61.024 55.000 0.00 0.00 39.53 3.06 R
4043 4165 8.183830 GCTGAGATATTGTATAATCAGCAGAC 57.816 38.462 17.48 3.59 45.81 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.669946 AATGTTCGGGTTTTTCAAAATATGTT 57.330 26.923 0.00 0.00 0.00 2.71
26 27 7.701809 TGTTCGGGTTTTTCAAAATATGTTC 57.298 32.000 0.00 0.00 0.00 3.18
27 28 7.493367 TGTTCGGGTTTTTCAAAATATGTTCT 58.507 30.769 0.00 0.00 0.00 3.01
28 29 7.650104 TGTTCGGGTTTTTCAAAATATGTTCTC 59.350 33.333 0.00 0.00 0.00 2.87
29 30 7.519032 TCGGGTTTTTCAAAATATGTTCTCT 57.481 32.000 0.00 0.00 0.00 3.10
30 31 7.367285 TCGGGTTTTTCAAAATATGTTCTCTG 58.633 34.615 0.00 0.00 0.00 3.35
31 32 7.013846 TCGGGTTTTTCAAAATATGTTCTCTGT 59.986 33.333 0.00 0.00 0.00 3.41
32 33 7.651704 CGGGTTTTTCAAAATATGTTCTCTGTT 59.348 33.333 0.00 0.00 0.00 3.16
33 34 9.974980 GGGTTTTTCAAAATATGTTCTCTGTTA 57.025 29.630 0.00 0.00 0.00 2.41
149 150 9.820725 AAAAGTGATCTCATGTTCAAAATTTGA 57.179 25.926 4.03 4.03 38.04 2.69
150 151 9.820725 AAAGTGATCTCATGTTCAAAATTTGAA 57.179 25.926 16.28 16.28 46.68 2.69
176 177 9.971922 AAAAATGTTTGTGTTTCAATTTTGGAA 57.028 22.222 0.00 0.00 35.84 3.53
319 320 8.892887 TTGATGTTTGTCTTTTTGAAAAATGC 57.107 26.923 3.28 1.16 34.70 3.56
320 321 8.037382 TGATGTTTGTCTTTTTGAAAAATGCA 57.963 26.923 3.28 3.65 34.70 3.96
321 322 8.675504 TGATGTTTGTCTTTTTGAAAAATGCAT 58.324 25.926 3.28 0.00 34.70 3.96
322 323 9.505995 GATGTTTGTCTTTTTGAAAAATGCATT 57.494 25.926 5.99 5.99 34.70 3.56
324 325 9.985318 TGTTTGTCTTTTTGAAAAATGCATTAG 57.015 25.926 13.39 3.77 34.70 1.73
333 334 8.464770 TTTGAAAAATGCATTAGATACACTGC 57.535 30.769 13.39 0.00 35.21 4.40
335 336 7.600960 TGAAAAATGCATTAGATACACTGCAA 58.399 30.769 13.39 0.00 46.59 4.08
336 337 8.087136 TGAAAAATGCATTAGATACACTGCAAA 58.913 29.630 13.39 0.00 46.59 3.68
337 338 9.090692 GAAAAATGCATTAGATACACTGCAAAT 57.909 29.630 13.39 0.00 46.59 2.32
338 339 8.638685 AAAATGCATTAGATACACTGCAAATC 57.361 30.769 13.39 0.00 46.59 2.17
339 340 5.756195 TGCATTAGATACACTGCAAATCC 57.244 39.130 0.00 0.00 41.33 3.01
340 341 4.273235 TGCATTAGATACACTGCAAATCCG 59.727 41.667 0.00 0.00 41.33 4.18
341 342 4.273480 GCATTAGATACACTGCAAATCCGT 59.727 41.667 0.00 0.00 34.77 4.69
342 343 5.465390 GCATTAGATACACTGCAAATCCGTA 59.535 40.000 0.00 0.00 34.77 4.02
343 344 6.564125 GCATTAGATACACTGCAAATCCGTAC 60.564 42.308 0.00 0.00 34.77 3.67
344 345 3.444916 AGATACACTGCAAATCCGTACG 58.555 45.455 8.69 8.69 0.00 3.67
345 346 1.999048 TACACTGCAAATCCGTACGG 58.001 50.000 28.66 28.66 0.00 4.02
346 347 0.672401 ACACTGCAAATCCGTACGGG 60.672 55.000 32.80 18.31 35.59 5.28
347 348 0.672401 CACTGCAAATCCGTACGGGT 60.672 55.000 32.80 25.60 37.00 5.28
348 349 0.896923 ACTGCAAATCCGTACGGGTA 59.103 50.000 32.80 16.45 37.00 3.69
349 350 1.283736 CTGCAAATCCGTACGGGTAC 58.716 55.000 32.80 19.54 37.00 3.34
350 351 0.607112 TGCAAATCCGTACGGGTACA 59.393 50.000 32.80 21.82 35.87 2.90
351 352 1.207570 TGCAAATCCGTACGGGTACAT 59.792 47.619 32.80 16.94 35.87 2.29
352 353 2.429971 TGCAAATCCGTACGGGTACATA 59.570 45.455 32.80 14.07 35.87 2.29
353 354 3.054878 GCAAATCCGTACGGGTACATAG 58.945 50.000 32.80 15.78 35.87 2.23
354 355 3.491447 GCAAATCCGTACGGGTACATAGT 60.491 47.826 32.80 10.06 35.87 2.12
355 356 4.685924 CAAATCCGTACGGGTACATAGTT 58.314 43.478 32.80 15.64 35.87 2.24
356 357 5.111293 CAAATCCGTACGGGTACATAGTTT 58.889 41.667 32.80 13.34 35.87 2.66
357 358 5.343307 AATCCGTACGGGTACATAGTTTT 57.657 39.130 32.80 5.56 35.87 2.43
358 359 4.799564 TCCGTACGGGTACATAGTTTTT 57.200 40.909 32.80 0.00 35.87 1.94
359 360 5.906113 TCCGTACGGGTACATAGTTTTTA 57.094 39.130 32.80 6.46 35.87 1.52
360 361 6.274157 TCCGTACGGGTACATAGTTTTTAA 57.726 37.500 32.80 5.76 35.87 1.52
361 362 6.692486 TCCGTACGGGTACATAGTTTTTAAA 58.308 36.000 32.80 5.35 35.87 1.52
362 363 7.155328 TCCGTACGGGTACATAGTTTTTAAAA 58.845 34.615 32.80 4.98 35.87 1.52
363 364 7.330700 TCCGTACGGGTACATAGTTTTTAAAAG 59.669 37.037 32.80 1.06 35.87 2.27
364 365 7.330700 CCGTACGGGTACATAGTTTTTAAAAGA 59.669 37.037 27.00 0.00 35.87 2.52
365 366 8.162245 CGTACGGGTACATAGTTTTTAAAAGAC 58.838 37.037 7.57 3.48 35.87 3.01
366 367 9.208022 GTACGGGTACATAGTTTTTAAAAGACT 57.792 33.333 15.36 15.36 36.15 3.24
367 368 8.091385 ACGGGTACATAGTTTTTAAAAGACTG 57.909 34.615 18.20 10.80 0.00 3.51
368 369 7.716560 ACGGGTACATAGTTTTTAAAAGACTGT 59.283 33.333 18.20 14.36 0.00 3.55
369 370 8.013378 CGGGTACATAGTTTTTAAAAGACTGTG 58.987 37.037 22.81 22.81 38.15 3.66
370 371 7.806487 GGGTACATAGTTTTTAAAAGACTGTGC 59.194 37.037 23.54 17.77 36.39 4.57
371 372 8.565416 GGTACATAGTTTTTAAAAGACTGTGCT 58.435 33.333 23.54 17.79 36.39 4.40
372 373 9.382244 GTACATAGTTTTTAAAAGACTGTGCTG 57.618 33.333 23.54 16.82 36.39 4.41
373 374 6.918022 ACATAGTTTTTAAAAGACTGTGCTGC 59.082 34.615 23.54 0.00 36.39 5.25
374 375 5.582689 AGTTTTTAAAAGACTGTGCTGCT 57.417 34.783 12.17 0.00 0.00 4.24
375 376 5.965922 AGTTTTTAAAAGACTGTGCTGCTT 58.034 33.333 12.17 0.00 0.00 3.91
376 377 7.095695 AGTTTTTAAAAGACTGTGCTGCTTA 57.904 32.000 12.17 0.00 0.00 3.09
377 378 7.716612 AGTTTTTAAAAGACTGTGCTGCTTAT 58.283 30.769 12.17 0.00 0.00 1.73
378 379 8.846211 AGTTTTTAAAAGACTGTGCTGCTTATA 58.154 29.630 12.17 0.00 0.00 0.98
379 380 9.626045 GTTTTTAAAAGACTGTGCTGCTTATAT 57.374 29.630 0.00 0.00 0.00 0.86
380 381 9.624697 TTTTTAAAAGACTGTGCTGCTTATATG 57.375 29.630 0.00 0.00 0.00 1.78
381 382 8.560355 TTTAAAAGACTGTGCTGCTTATATGA 57.440 30.769 0.00 0.00 0.00 2.15
382 383 6.428385 AAAAGACTGTGCTGCTTATATGAC 57.572 37.500 0.00 0.00 0.00 3.06
383 384 5.350504 AAGACTGTGCTGCTTATATGACT 57.649 39.130 0.00 0.00 0.00 3.41
384 385 6.471233 AAGACTGTGCTGCTTATATGACTA 57.529 37.500 0.00 0.00 0.00 2.59
385 386 6.083098 AGACTGTGCTGCTTATATGACTAG 57.917 41.667 0.00 0.00 0.00 2.57
386 387 5.830457 AGACTGTGCTGCTTATATGACTAGA 59.170 40.000 0.00 0.00 0.00 2.43
387 388 6.322456 AGACTGTGCTGCTTATATGACTAGAA 59.678 38.462 0.00 0.00 0.00 2.10
388 389 6.276847 ACTGTGCTGCTTATATGACTAGAAC 58.723 40.000 0.00 0.00 0.00 3.01
389 390 6.097554 ACTGTGCTGCTTATATGACTAGAACT 59.902 38.462 0.00 0.00 0.00 3.01
390 391 6.878317 TGTGCTGCTTATATGACTAGAACTT 58.122 36.000 0.00 0.00 0.00 2.66
391 392 7.331026 TGTGCTGCTTATATGACTAGAACTTT 58.669 34.615 0.00 0.00 0.00 2.66
392 393 7.278646 TGTGCTGCTTATATGACTAGAACTTTG 59.721 37.037 0.00 0.00 0.00 2.77
393 394 7.492669 GTGCTGCTTATATGACTAGAACTTTGA 59.507 37.037 0.00 0.00 0.00 2.69
394 395 8.206867 TGCTGCTTATATGACTAGAACTTTGAT 58.793 33.333 0.00 0.00 0.00 2.57
395 396 9.050601 GCTGCTTATATGACTAGAACTTTGATT 57.949 33.333 0.00 0.00 0.00 2.57
397 398 9.330063 TGCTTATATGACTAGAACTTTGATTGG 57.670 33.333 0.00 0.00 0.00 3.16
398 399 9.331282 GCTTATATGACTAGAACTTTGATTGGT 57.669 33.333 0.00 0.00 0.00 3.67
401 402 8.954950 ATATGACTAGAACTTTGATTGGTCTG 57.045 34.615 0.00 0.00 0.00 3.51
402 403 6.174720 TGACTAGAACTTTGATTGGTCTGT 57.825 37.500 0.00 0.00 0.00 3.41
403 404 6.591935 TGACTAGAACTTTGATTGGTCTGTT 58.408 36.000 0.00 0.00 0.00 3.16
404 405 6.483307 TGACTAGAACTTTGATTGGTCTGTTG 59.517 38.462 0.00 0.00 0.00 3.33
405 406 5.765182 ACTAGAACTTTGATTGGTCTGTTGG 59.235 40.000 0.00 0.00 0.00 3.77
406 407 3.319122 AGAACTTTGATTGGTCTGTTGGC 59.681 43.478 0.00 0.00 0.00 4.52
407 408 2.949447 ACTTTGATTGGTCTGTTGGCT 58.051 42.857 0.00 0.00 0.00 4.75
408 409 4.098914 ACTTTGATTGGTCTGTTGGCTA 57.901 40.909 0.00 0.00 0.00 3.93
409 410 4.666512 ACTTTGATTGGTCTGTTGGCTAT 58.333 39.130 0.00 0.00 0.00 2.97
410 411 4.702131 ACTTTGATTGGTCTGTTGGCTATC 59.298 41.667 0.00 0.00 0.00 2.08
411 412 2.905075 TGATTGGTCTGTTGGCTATCG 58.095 47.619 0.00 0.00 0.00 2.92
412 413 2.236146 TGATTGGTCTGTTGGCTATCGT 59.764 45.455 0.00 0.00 0.00 3.73
413 414 2.380084 TTGGTCTGTTGGCTATCGTC 57.620 50.000 0.00 0.00 0.00 4.20
414 415 1.557099 TGGTCTGTTGGCTATCGTCT 58.443 50.000 0.00 0.00 0.00 4.18
415 416 1.476891 TGGTCTGTTGGCTATCGTCTC 59.523 52.381 0.00 0.00 0.00 3.36
416 417 1.534175 GGTCTGTTGGCTATCGTCTCG 60.534 57.143 0.00 0.00 0.00 4.04
417 418 0.100682 TCTGTTGGCTATCGTCTCGC 59.899 55.000 0.00 0.00 0.00 5.03
418 419 1.202973 CTGTTGGCTATCGTCTCGCG 61.203 60.000 0.00 0.00 43.01 5.87
419 420 2.278596 TTGGCTATCGTCTCGCGC 60.279 61.111 0.00 0.00 41.07 6.86
420 421 3.058783 TTGGCTATCGTCTCGCGCA 62.059 57.895 8.75 0.00 41.07 6.09
421 422 3.025176 GGCTATCGTCTCGCGCAC 61.025 66.667 8.75 0.00 41.07 5.34
422 423 2.277949 GCTATCGTCTCGCGCACA 60.278 61.111 8.75 0.00 41.07 4.57
423 424 1.872234 GCTATCGTCTCGCGCACAA 60.872 57.895 8.75 0.00 41.07 3.33
424 425 1.910880 CTATCGTCTCGCGCACAAC 59.089 57.895 8.75 0.00 41.07 3.32
425 426 0.796870 CTATCGTCTCGCGCACAACA 60.797 55.000 8.75 0.00 41.07 3.33
426 427 0.387494 TATCGTCTCGCGCACAACAA 60.387 50.000 8.75 0.00 41.07 2.83
427 428 1.886861 ATCGTCTCGCGCACAACAAC 61.887 55.000 8.75 0.00 41.07 3.32
428 429 2.128128 GTCTCGCGCACAACAACG 60.128 61.111 8.75 0.00 0.00 4.10
429 430 2.278923 TCTCGCGCACAACAACGA 60.279 55.556 8.75 0.00 0.00 3.85
430 431 2.168621 CTCGCGCACAACAACGAG 59.831 61.111 8.75 0.00 45.02 4.18
431 432 2.278923 TCGCGCACAACAACGAGA 60.279 55.556 8.75 0.00 35.74 4.04
432 433 2.168621 CGCGCACAACAACGAGAG 59.831 61.111 8.75 0.00 0.00 3.20
433 434 2.551270 GCGCACAACAACGAGAGG 59.449 61.111 0.30 0.00 0.00 3.69
434 435 2.244651 GCGCACAACAACGAGAGGT 61.245 57.895 0.30 0.00 0.00 3.85
435 436 0.942410 GCGCACAACAACGAGAGGTA 60.942 55.000 0.30 0.00 0.00 3.08
436 437 1.060713 CGCACAACAACGAGAGGTAG 58.939 55.000 0.00 0.00 0.00 3.18
437 438 1.429463 GCACAACAACGAGAGGTAGG 58.571 55.000 0.00 0.00 0.00 3.18
438 439 1.270147 GCACAACAACGAGAGGTAGGT 60.270 52.381 0.00 0.00 0.00 3.08
439 440 2.404215 CACAACAACGAGAGGTAGGTG 58.596 52.381 0.00 0.00 0.00 4.00
440 441 1.270147 ACAACAACGAGAGGTAGGTGC 60.270 52.381 0.00 0.00 0.00 5.01
441 442 0.038526 AACAACGAGAGGTAGGTGCG 60.039 55.000 0.00 0.00 0.00 5.34
442 443 1.805945 CAACGAGAGGTAGGTGCGC 60.806 63.158 0.00 0.00 0.00 6.09
443 444 3.338126 AACGAGAGGTAGGTGCGCG 62.338 63.158 0.00 0.00 0.00 6.86
445 446 4.129737 GAGAGGTAGGTGCGCGCA 62.130 66.667 33.09 33.09 0.00 6.09
446 447 3.432051 GAGAGGTAGGTGCGCGCAT 62.432 63.158 38.62 25.12 0.00 4.73
447 448 2.511600 GAGGTAGGTGCGCGCATT 60.512 61.111 38.62 28.93 0.00 3.56
448 449 2.046314 AGGTAGGTGCGCGCATTT 60.046 55.556 38.62 28.56 0.00 2.32
449 450 1.644786 GAGGTAGGTGCGCGCATTTT 61.645 55.000 38.62 26.02 0.00 1.82
450 451 1.226295 GGTAGGTGCGCGCATTTTC 60.226 57.895 38.62 23.90 0.00 2.29
451 452 1.226295 GTAGGTGCGCGCATTTTCC 60.226 57.895 38.62 31.53 0.00 3.13
452 453 1.672682 TAGGTGCGCGCATTTTCCA 60.673 52.632 38.62 19.58 0.00 3.53
453 454 1.643868 TAGGTGCGCGCATTTTCCAG 61.644 55.000 38.62 0.00 0.00 3.86
454 455 2.255252 GTGCGCGCATTTTCCAGT 59.745 55.556 38.62 0.00 0.00 4.00
455 456 1.499949 GTGCGCGCATTTTCCAGTA 59.500 52.632 38.62 6.72 0.00 2.74
456 457 0.521242 GTGCGCGCATTTTCCAGTAG 60.521 55.000 38.62 0.00 0.00 2.57
457 458 1.062525 GCGCGCATTTTCCAGTAGG 59.937 57.895 29.10 0.00 0.00 3.18
458 459 1.644786 GCGCGCATTTTCCAGTAGGT 61.645 55.000 29.10 0.00 35.89 3.08
459 460 0.096976 CGCGCATTTTCCAGTAGGTG 59.903 55.000 8.75 0.00 35.89 4.00
460 461 1.165270 GCGCATTTTCCAGTAGGTGT 58.835 50.000 0.30 0.00 35.89 4.16
461 462 1.130561 GCGCATTTTCCAGTAGGTGTC 59.869 52.381 0.30 0.00 35.89 3.67
462 463 2.699954 CGCATTTTCCAGTAGGTGTCT 58.300 47.619 0.00 0.00 35.89 3.41
463 464 2.416547 CGCATTTTCCAGTAGGTGTCTG 59.583 50.000 0.00 0.00 35.89 3.51
464 465 3.412386 GCATTTTCCAGTAGGTGTCTGT 58.588 45.455 0.00 0.00 35.89 3.41
465 466 4.575885 GCATTTTCCAGTAGGTGTCTGTA 58.424 43.478 0.00 0.00 35.89 2.74
466 467 4.392138 GCATTTTCCAGTAGGTGTCTGTAC 59.608 45.833 0.00 0.00 35.89 2.90
467 468 3.928727 TTTCCAGTAGGTGTCTGTACG 57.071 47.619 0.00 0.00 35.89 3.67
468 469 1.830279 TCCAGTAGGTGTCTGTACGG 58.170 55.000 0.00 0.00 35.89 4.02
469 470 0.815734 CCAGTAGGTGTCTGTACGGG 59.184 60.000 0.85 0.00 0.00 5.28
470 471 1.542492 CAGTAGGTGTCTGTACGGGT 58.458 55.000 0.85 0.00 0.00 5.28
471 472 1.891150 CAGTAGGTGTCTGTACGGGTT 59.109 52.381 0.85 0.00 0.00 4.11
472 473 2.094854 CAGTAGGTGTCTGTACGGGTTC 60.095 54.545 0.85 0.00 0.00 3.62
473 474 1.135575 GTAGGTGTCTGTACGGGTTCG 60.136 57.143 0.85 0.00 43.02 3.95
474 475 0.538057 AGGTGTCTGTACGGGTTCGA 60.538 55.000 0.85 0.00 40.11 3.71
475 476 0.529378 GGTGTCTGTACGGGTTCGAT 59.471 55.000 0.85 0.00 40.11 3.59
476 477 1.067354 GGTGTCTGTACGGGTTCGATT 60.067 52.381 0.85 0.00 40.11 3.34
477 478 2.257034 GTGTCTGTACGGGTTCGATTC 58.743 52.381 0.85 0.00 40.11 2.52
478 479 1.203052 TGTCTGTACGGGTTCGATTCC 59.797 52.381 0.85 0.00 40.11 3.01
479 480 0.819582 TCTGTACGGGTTCGATTCCC 59.180 55.000 14.08 14.08 41.41 3.97
480 481 0.533491 CTGTACGGGTTCGATTCCCA 59.467 55.000 21.03 5.01 44.81 4.37
481 482 0.533491 TGTACGGGTTCGATTCCCAG 59.467 55.000 21.03 16.45 44.81 4.45
482 483 0.533951 GTACGGGTTCGATTCCCAGT 59.466 55.000 21.03 19.79 44.81 4.00
483 484 1.750778 GTACGGGTTCGATTCCCAGTA 59.249 52.381 21.03 19.07 44.81 2.74
484 485 0.822164 ACGGGTTCGATTCCCAGTAG 59.178 55.000 21.03 10.52 44.81 2.57
485 486 0.104304 CGGGTTCGATTCCCAGTAGG 59.896 60.000 21.03 5.65 44.81 3.18
486 487 1.201424 GGGTTCGATTCCCAGTAGGT 58.799 55.000 17.81 0.00 44.05 3.08
487 488 2.391678 GGGTTCGATTCCCAGTAGGTA 58.608 52.381 17.81 0.00 44.05 3.08
488 489 2.970640 GGGTTCGATTCCCAGTAGGTAT 59.029 50.000 17.81 0.00 44.05 2.73
489 490 3.006644 GGGTTCGATTCCCAGTAGGTATC 59.993 52.174 17.81 0.00 44.05 2.24
490 491 3.896272 GGTTCGATTCCCAGTAGGTATCT 59.104 47.826 0.00 0.00 39.65 1.98
491 492 4.262079 GGTTCGATTCCCAGTAGGTATCTG 60.262 50.000 0.00 0.00 39.65 2.90
492 493 4.180377 TCGATTCCCAGTAGGTATCTGT 57.820 45.455 0.00 0.00 39.65 3.41
493 494 5.314718 TCGATTCCCAGTAGGTATCTGTA 57.685 43.478 0.00 0.00 39.65 2.74
494 495 5.888901 TCGATTCCCAGTAGGTATCTGTAT 58.111 41.667 0.00 0.00 39.65 2.29
495 496 5.710567 TCGATTCCCAGTAGGTATCTGTATG 59.289 44.000 0.00 0.00 39.65 2.39
496 497 5.105716 CGATTCCCAGTAGGTATCTGTATGG 60.106 48.000 0.00 0.00 39.65 2.74
497 498 4.827036 TCCCAGTAGGTATCTGTATGGT 57.173 45.455 3.21 0.00 36.75 3.55
498 499 5.935668 TCCCAGTAGGTATCTGTATGGTA 57.064 43.478 3.21 0.00 36.75 3.25
499 500 5.888901 TCCCAGTAGGTATCTGTATGGTAG 58.111 45.833 3.21 0.00 36.75 3.18
500 501 5.017490 CCCAGTAGGTATCTGTATGGTAGG 58.983 50.000 3.21 0.00 0.00 3.18
501 502 5.459241 CCCAGTAGGTATCTGTATGGTAGGT 60.459 48.000 3.21 0.00 0.00 3.08
502 503 6.240380 CCCAGTAGGTATCTGTATGGTAGGTA 60.240 46.154 3.21 0.00 0.00 3.08
503 504 6.885376 CCAGTAGGTATCTGTATGGTAGGTAG 59.115 46.154 0.00 0.00 0.00 3.18
504 505 6.885376 CAGTAGGTATCTGTATGGTAGGTAGG 59.115 46.154 0.00 0.00 0.00 3.18
505 506 5.944809 AGGTATCTGTATGGTAGGTAGGT 57.055 43.478 0.00 0.00 0.00 3.08
506 507 5.642165 AGGTATCTGTATGGTAGGTAGGTG 58.358 45.833 0.00 0.00 0.00 4.00
507 508 4.220163 GGTATCTGTATGGTAGGTAGGTGC 59.780 50.000 0.00 0.00 0.00 5.01
508 509 2.304092 TCTGTATGGTAGGTAGGTGCG 58.696 52.381 0.00 0.00 0.00 5.34
509 510 2.029623 CTGTATGGTAGGTAGGTGCGT 58.970 52.381 0.00 0.00 0.00 5.24
510 511 1.752498 TGTATGGTAGGTAGGTGCGTG 59.248 52.381 0.00 0.00 0.00 5.34
511 512 0.748450 TATGGTAGGTAGGTGCGTGC 59.252 55.000 0.00 0.00 0.00 5.34
512 513 1.261938 ATGGTAGGTAGGTGCGTGCA 61.262 55.000 0.00 0.00 0.00 4.57
513 514 1.261938 TGGTAGGTAGGTGCGTGCAT 61.262 55.000 0.00 0.00 0.00 3.96
514 515 0.107848 GGTAGGTAGGTGCGTGCATT 60.108 55.000 0.00 0.00 0.00 3.56
515 516 1.677820 GGTAGGTAGGTGCGTGCATTT 60.678 52.381 0.00 0.00 0.00 2.32
516 517 2.081462 GTAGGTAGGTGCGTGCATTTT 58.919 47.619 0.00 0.00 0.00 1.82
517 518 1.165270 AGGTAGGTGCGTGCATTTTC 58.835 50.000 0.00 0.00 0.00 2.29
518 519 0.170339 GGTAGGTGCGTGCATTTTCC 59.830 55.000 0.00 0.00 0.00 3.13
519 520 0.878416 GTAGGTGCGTGCATTTTCCA 59.122 50.000 0.00 0.00 0.00 3.53
520 521 1.135689 GTAGGTGCGTGCATTTTCCAG 60.136 52.381 0.00 0.00 0.00 3.86
521 522 0.823356 AGGTGCGTGCATTTTCCAGT 60.823 50.000 0.00 0.00 0.00 4.00
522 523 0.878416 GGTGCGTGCATTTTCCAGTA 59.122 50.000 0.00 0.00 0.00 2.74
523 524 1.135689 GGTGCGTGCATTTTCCAGTAG 60.136 52.381 0.00 0.00 0.00 2.57
524 525 1.135689 GTGCGTGCATTTTCCAGTAGG 60.136 52.381 0.00 0.00 0.00 3.18
525 526 1.165270 GCGTGCATTTTCCAGTAGGT 58.835 50.000 0.00 0.00 35.89 3.08
526 527 1.135689 GCGTGCATTTTCCAGTAGGTG 60.136 52.381 0.00 0.00 35.89 4.00
527 528 1.135689 CGTGCATTTTCCAGTAGGTGC 60.136 52.381 0.00 0.00 34.65 5.01
528 529 1.135689 GTGCATTTTCCAGTAGGTGCG 60.136 52.381 0.00 0.00 36.31 5.34
529 530 0.179163 GCATTTTCCAGTAGGTGCGC 60.179 55.000 0.00 0.00 35.89 6.09
530 531 1.164411 CATTTTCCAGTAGGTGCGCA 58.836 50.000 5.66 5.66 35.89 6.09
531 532 1.135689 CATTTTCCAGTAGGTGCGCAC 60.136 52.381 32.15 32.15 35.89 5.34
532 533 0.179043 TTTTCCAGTAGGTGCGCACA 60.179 50.000 38.60 19.65 35.89 4.57
533 534 0.882927 TTTCCAGTAGGTGCGCACAC 60.883 55.000 38.60 29.05 46.66 3.82
534 535 1.754380 TTCCAGTAGGTGCGCACACT 61.754 55.000 38.60 32.03 46.57 3.55
535 536 1.301716 CCAGTAGGTGCGCACACTT 60.302 57.895 38.60 25.74 46.57 3.16
536 537 1.291877 CCAGTAGGTGCGCACACTTC 61.292 60.000 38.60 27.98 46.57 3.01
537 538 0.599991 CAGTAGGTGCGCACACTTCA 60.600 55.000 38.60 17.83 46.57 3.02
538 539 0.321671 AGTAGGTGCGCACACTTCAT 59.678 50.000 38.60 19.88 46.57 2.57
539 540 0.443869 GTAGGTGCGCACACTTCATG 59.556 55.000 38.60 0.00 46.57 3.07
540 541 0.034756 TAGGTGCGCACACTTCATGT 59.965 50.000 38.60 15.94 46.57 3.21
541 542 1.207593 GGTGCGCACACTTCATGTC 59.792 57.895 38.60 16.62 46.57 3.06
542 543 1.230635 GGTGCGCACACTTCATGTCT 61.231 55.000 38.60 0.00 46.57 3.41
543 544 0.110509 GTGCGCACACTTCATGTCTG 60.111 55.000 34.52 0.00 43.85 3.51
544 545 0.532640 TGCGCACACTTCATGTCTGT 60.533 50.000 5.66 0.00 40.64 3.41
545 546 1.270041 TGCGCACACTTCATGTCTGTA 60.270 47.619 5.66 0.00 40.64 2.74
546 547 1.126846 GCGCACACTTCATGTCTGTAC 59.873 52.381 0.30 0.00 40.64 2.90
547 548 1.386748 CGCACACTTCATGTCTGTACG 59.613 52.381 0.00 0.00 40.64 3.67
548 549 1.726791 GCACACTTCATGTCTGTACGG 59.273 52.381 0.00 0.00 40.64 4.02
549 550 2.337583 CACACTTCATGTCTGTACGGG 58.662 52.381 0.85 0.00 40.64 5.28
550 551 1.968493 ACACTTCATGTCTGTACGGGT 59.032 47.619 0.85 0.00 36.54 5.28
551 552 2.367567 ACACTTCATGTCTGTACGGGTT 59.632 45.455 0.85 0.00 36.54 4.11
552 553 2.993899 CACTTCATGTCTGTACGGGTTC 59.006 50.000 0.85 0.00 0.00 3.62
553 554 2.259618 CTTCATGTCTGTACGGGTTCG 58.740 52.381 0.85 0.00 43.02 3.95
554 555 1.536940 TCATGTCTGTACGGGTTCGA 58.463 50.000 0.85 0.00 40.11 3.71
555 556 2.097036 TCATGTCTGTACGGGTTCGAT 58.903 47.619 0.85 0.00 40.11 3.59
556 557 2.494471 TCATGTCTGTACGGGTTCGATT 59.506 45.455 0.85 0.00 40.11 3.34
557 558 2.642139 TGTCTGTACGGGTTCGATTC 57.358 50.000 0.85 0.00 40.11 2.52
558 559 1.203052 TGTCTGTACGGGTTCGATTCC 59.797 52.381 0.85 0.00 40.11 3.01
559 560 0.819582 TCTGTACGGGTTCGATTCCC 59.180 55.000 14.08 14.08 41.41 3.97
560 561 0.533491 CTGTACGGGTTCGATTCCCA 59.467 55.000 21.03 5.01 44.81 4.37
561 562 0.533491 TGTACGGGTTCGATTCCCAG 59.467 55.000 21.03 16.45 44.81 4.45
562 563 0.533951 GTACGGGTTCGATTCCCAGT 59.466 55.000 21.03 19.79 44.81 4.00
563 564 1.750778 GTACGGGTTCGATTCCCAGTA 59.249 52.381 21.03 19.07 44.81 2.74
564 565 0.822164 ACGGGTTCGATTCCCAGTAG 59.178 55.000 21.03 10.52 44.81 2.57
565 566 0.104304 CGGGTTCGATTCCCAGTAGG 59.896 60.000 21.03 5.65 44.81 3.18
566 567 1.201424 GGGTTCGATTCCCAGTAGGT 58.799 55.000 17.81 0.00 44.05 3.08
567 568 1.134491 GGGTTCGATTCCCAGTAGGTG 60.134 57.143 17.81 0.00 44.05 4.00
568 569 1.653151 GTTCGATTCCCAGTAGGTGC 58.347 55.000 0.00 0.00 36.75 5.01
569 570 0.174845 TTCGATTCCCAGTAGGTGCG 59.825 55.000 0.00 0.00 36.75 5.34
570 571 1.883084 CGATTCCCAGTAGGTGCGC 60.883 63.158 0.00 0.00 36.75 6.09
571 572 1.883084 GATTCCCAGTAGGTGCGCG 60.883 63.158 0.00 0.00 36.75 6.86
572 573 4.752879 TTCCCAGTAGGTGCGCGC 62.753 66.667 27.26 27.26 36.75 6.86
574 575 4.838152 CCCAGTAGGTGCGCGCAT 62.838 66.667 38.62 25.12 0.00 4.73
575 576 2.819595 CCAGTAGGTGCGCGCATT 60.820 61.111 38.62 28.93 0.00 3.56
576 577 2.398554 CCAGTAGGTGCGCGCATTT 61.399 57.895 38.62 28.56 0.00 2.32
577 578 1.501741 CAGTAGGTGCGCGCATTTT 59.498 52.632 38.62 26.02 0.00 1.82
578 579 0.521242 CAGTAGGTGCGCGCATTTTC 60.521 55.000 38.62 23.90 0.00 2.29
579 580 1.226295 GTAGGTGCGCGCATTTTCC 60.226 57.895 38.62 31.53 0.00 3.13
580 581 1.376683 TAGGTGCGCGCATTTTCCT 60.377 52.632 38.62 35.99 0.00 3.36
581 582 0.958382 TAGGTGCGCGCATTTTCCTT 60.958 50.000 36.11 23.31 0.00 3.36
582 583 1.372872 GGTGCGCGCATTTTCCTTT 60.373 52.632 38.62 0.00 0.00 3.11
583 584 0.943835 GGTGCGCGCATTTTCCTTTT 60.944 50.000 38.62 0.00 0.00 2.27
584 585 0.858583 GTGCGCGCATTTTCCTTTTT 59.141 45.000 38.62 0.00 0.00 1.94
610 611 5.689383 TTTTCAGTTCCTTGATACACTGC 57.311 39.130 0.00 0.00 37.22 4.40
611 612 4.350368 TTCAGTTCCTTGATACACTGCA 57.650 40.909 0.00 0.00 37.22 4.41
612 613 3.664107 TCAGTTCCTTGATACACTGCAC 58.336 45.455 0.00 0.00 37.22 4.57
613 614 2.413112 CAGTTCCTTGATACACTGCACG 59.587 50.000 0.00 0.00 30.79 5.34
614 615 2.299013 AGTTCCTTGATACACTGCACGA 59.701 45.455 0.00 0.00 0.00 4.35
615 616 2.363788 TCCTTGATACACTGCACGAC 57.636 50.000 0.00 0.00 0.00 4.34
616 617 1.893137 TCCTTGATACACTGCACGACT 59.107 47.619 0.00 0.00 0.00 4.18
617 618 1.995484 CCTTGATACACTGCACGACTG 59.005 52.381 0.00 0.00 0.00 3.51
618 619 1.391485 CTTGATACACTGCACGACTGC 59.609 52.381 0.00 0.00 44.52 4.40
641 642 4.704833 GCGGCCCAGTCAGCTTGA 62.705 66.667 0.00 0.00 0.00 3.02
651 652 1.055338 GTCAGCTTGACGCAAAATGC 58.945 50.000 0.00 0.00 42.61 3.56
663 664 2.785679 GCAAAATGCGTCACATAGGAC 58.214 47.619 0.00 0.00 38.34 3.85
664 665 2.477863 GCAAAATGCGTCACATAGGACC 60.478 50.000 0.00 0.00 38.34 4.46
665 666 3.009723 CAAAATGCGTCACATAGGACCT 58.990 45.455 0.00 0.00 38.34 3.85
666 667 2.604046 AATGCGTCACATAGGACCTC 57.396 50.000 0.00 0.00 38.34 3.85
667 668 0.753262 ATGCGTCACATAGGACCTCC 59.247 55.000 0.00 0.00 37.17 4.30
668 669 1.327690 TGCGTCACATAGGACCTCCC 61.328 60.000 0.00 0.00 36.42 4.30
670 671 1.486211 CGTCACATAGGACCTCCCTT 58.514 55.000 0.00 0.00 44.85 3.95
671 672 1.137086 CGTCACATAGGACCTCCCTTG 59.863 57.143 0.00 0.00 44.85 3.61
672 673 1.134371 GTCACATAGGACCTCCCTTGC 60.134 57.143 0.00 0.00 44.85 4.01
673 674 0.179073 CACATAGGACCTCCCTTGCG 60.179 60.000 0.00 0.00 44.85 4.85
674 675 1.338136 ACATAGGACCTCCCTTGCGG 61.338 60.000 0.00 0.00 44.85 5.69
675 676 2.444256 ATAGGACCTCCCTTGCGGC 61.444 63.158 0.00 0.00 44.85 6.53
676 677 3.916438 TAGGACCTCCCTTGCGGCA 62.916 63.158 0.00 0.00 44.85 5.69
677 678 4.785453 GGACCTCCCTTGCGGCAG 62.785 72.222 1.67 0.00 0.00 4.85
678 679 3.706373 GACCTCCCTTGCGGCAGA 61.706 66.667 1.67 0.00 0.00 4.26
679 680 3.672295 GACCTCCCTTGCGGCAGAG 62.672 68.421 1.67 6.76 0.00 3.35
681 682 4.399395 CTCCCTTGCGGCAGAGCA 62.399 66.667 1.67 0.00 46.54 4.26
687 688 2.273123 TGCGGCAGAGCATCCATT 59.727 55.556 0.00 0.00 42.92 3.16
688 689 1.526405 TGCGGCAGAGCATCCATTA 59.474 52.632 0.00 0.00 42.92 1.90
689 690 0.109153 TGCGGCAGAGCATCCATTAT 59.891 50.000 0.00 0.00 42.92 1.28
690 691 1.347378 TGCGGCAGAGCATCCATTATA 59.653 47.619 0.00 0.00 42.92 0.98
691 692 2.005451 GCGGCAGAGCATCCATTATAG 58.995 52.381 0.00 0.00 37.05 1.31
692 693 2.005451 CGGCAGAGCATCCATTATAGC 58.995 52.381 0.00 0.00 33.66 2.97
693 694 2.613725 CGGCAGAGCATCCATTATAGCA 60.614 50.000 0.00 0.00 33.66 3.49
694 695 3.415212 GGCAGAGCATCCATTATAGCAA 58.585 45.455 0.00 0.00 33.66 3.91
695 696 3.822735 GGCAGAGCATCCATTATAGCAAA 59.177 43.478 0.00 0.00 33.66 3.68
696 697 4.279169 GGCAGAGCATCCATTATAGCAAAA 59.721 41.667 0.00 0.00 33.66 2.44
697 698 5.221303 GGCAGAGCATCCATTATAGCAAAAA 60.221 40.000 0.00 0.00 33.66 1.94
723 724 8.146479 AGAAAAATTCAAATGAAGGAAACAGC 57.854 30.769 1.98 0.00 37.48 4.40
724 725 7.989170 AGAAAAATTCAAATGAAGGAAACAGCT 59.011 29.630 1.98 0.00 37.48 4.24
725 726 9.260002 GAAAAATTCAAATGAAGGAAACAGCTA 57.740 29.630 1.98 0.00 37.48 3.32
726 727 9.783081 AAAAATTCAAATGAAGGAAACAGCTAT 57.217 25.926 1.98 0.00 37.48 2.97
730 731 9.638176 ATTCAAATGAAGGAAACAGCTATATCT 57.362 29.630 1.98 0.00 37.48 1.98
755 756 1.494721 ACCTGGGCCATATGTAACCTG 59.505 52.381 6.72 5.00 0.00 4.00
757 758 1.143684 CTGGGCCATATGTAACCTGCT 59.856 52.381 6.72 0.00 0.00 4.24
772 773 1.228956 TGCTGCTCATTGGGCCTTT 60.229 52.632 5.96 0.00 0.00 3.11
774 775 0.108472 GCTGCTCATTGGGCCTTTTC 60.108 55.000 5.96 0.00 0.00 2.29
821 822 1.544724 TTGGCCTGCTAAATGACCAC 58.455 50.000 3.32 0.00 0.00 4.16
855 860 2.035961 TCCTCTCGTCAAAGACAACCAG 59.964 50.000 0.00 0.00 32.09 4.00
973 978 2.509561 GGCGGAAGGAGCGAGTTC 60.510 66.667 0.00 0.00 35.00 3.01
1084 1089 3.532155 CGGAAGCGGAGGAGGAGG 61.532 72.222 0.00 0.00 0.00 4.30
1085 1090 3.157949 GGAAGCGGAGGAGGAGGG 61.158 72.222 0.00 0.00 0.00 4.30
1086 1091 3.157949 GAAGCGGAGGAGGAGGGG 61.158 72.222 0.00 0.00 0.00 4.79
1311 1316 2.363680 CTGAGATGATGCGACTAACCCT 59.636 50.000 0.00 0.00 0.00 4.34
1376 1381 0.668535 GGTTTTGCTCGCCTGTTCTT 59.331 50.000 0.00 0.00 0.00 2.52
1393 1398 4.039245 TGTTCTTGACTTGTAGGTGGAGAG 59.961 45.833 0.00 0.00 0.00 3.20
1403 1408 1.939980 AGGTGGAGAGAAGTGGGTAC 58.060 55.000 0.00 0.00 0.00 3.34
1563 1568 8.458843 GTTTGATTCCTCTTTTCAATAATCCGA 58.541 33.333 0.00 0.00 0.00 4.55
1591 1596 5.643348 TGTTATCCGGATCATGCATAATCAC 59.357 40.000 23.08 0.99 0.00 3.06
1626 1635 5.772672 ACTGGAAAAATTGTAGCACACCATA 59.227 36.000 0.00 0.00 0.00 2.74
1641 1650 7.538575 AGCACACCATATGTTATTGTTCTTTC 58.461 34.615 1.24 0.00 40.64 2.62
1654 1663 3.992643 TGTTCTTTCCATGGCATTTGTG 58.007 40.909 6.96 0.00 0.00 3.33
1728 1820 3.152341 CAGGCATTCTTGGTCTTTGTCT 58.848 45.455 0.00 0.00 0.00 3.41
1755 1847 0.908910 TCGGCAGGAGGAATGCTAAA 59.091 50.000 0.00 0.00 43.35 1.85
1776 1868 9.979270 GCTAAATATATATTGTTAGCACTGCAG 57.021 33.333 22.92 13.48 34.49 4.41
1785 1877 1.527034 TAGCACTGCAGCCTTCTTTG 58.473 50.000 15.27 3.50 34.23 2.77
1790 1882 1.349026 ACTGCAGCCTTCTTTGCTCTA 59.651 47.619 15.27 0.00 40.87 2.43
1809 1902 6.127423 TGCTCTACTTTAGTTATCCTGTCACC 60.127 42.308 0.00 0.00 0.00 4.02
2137 2236 6.718454 CCCTTCCTGATTATGCTACATCATTT 59.282 38.462 0.00 0.00 0.00 2.32
2334 2433 7.841282 ATTCTCGGGATTTTATCAGTCTAGA 57.159 36.000 0.00 0.00 0.00 2.43
2352 2451 8.696374 CAGTCTAGATTATCAGGTTTTGGTCTA 58.304 37.037 0.00 0.00 0.00 2.59
2365 2465 7.447238 CAGGTTTTGGTCTATCTTAGGTTCAAA 59.553 37.037 0.00 0.00 0.00 2.69
2367 2467 8.803235 GGTTTTGGTCTATCTTAGGTTCAAATT 58.197 33.333 0.00 0.00 0.00 1.82
2389 2489 7.996098 ATTAATTTCCCCATGATTACCTACG 57.004 36.000 0.00 0.00 0.00 3.51
2426 2528 3.347958 AATTTCGTTTCTTGCTTGCGA 57.652 38.095 0.00 0.00 0.00 5.10
2504 2606 7.252612 TCTACCTTGTCATTGAAATCAGGTA 57.747 36.000 7.08 7.08 0.00 3.08
2535 2637 2.441750 AGAGTTTGGTTCTGTAAGCCCA 59.558 45.455 0.00 0.00 33.65 5.36
2839 2941 8.980481 AACCAAAATCAAGAGTTATATCGGAT 57.020 30.769 0.00 0.00 0.00 4.18
2851 2953 8.237949 AGAGTTATATCGGATTACAATGTCTCG 58.762 37.037 0.00 0.00 0.00 4.04
2944 3046 3.371898 TGCTATGCAACAACAGAATCTCG 59.628 43.478 0.00 0.00 34.76 4.04
3069 3171 1.581934 CCGGATATCAAAGCGCAAGA 58.418 50.000 11.47 4.24 43.02 3.02
3178 3280 5.242393 ACCTGCAGGCTTATATTTAGCATTG 59.758 40.000 33.06 2.39 40.42 2.82
3240 3342 3.489355 TCAATGTCAAGCACAATGAGGT 58.511 40.909 0.00 0.00 39.59 3.85
3604 3706 3.176552 AGCAAGAGTGGAGATGATTCG 57.823 47.619 0.00 0.00 0.00 3.34
3660 3762 4.616143 CGCAGAAAGAGTTGCTAGTCTACA 60.616 45.833 5.92 0.00 38.16 2.74
3816 3933 6.653020 AGTAACTTCAGGTGATGATAATGCA 58.347 36.000 0.00 0.00 37.89 3.96
3848 3965 5.098663 TCCCTTTAAGTGGGTGTTCTAGAT 58.901 41.667 13.28 0.00 44.84 1.98
3923 4044 7.443575 GGCAGATGTAAATATGTGTCATCTCTT 59.556 37.037 10.53 0.00 41.81 2.85
4043 4165 1.153449 TCTAGCATTTCGTGGGCGG 60.153 57.895 0.00 0.00 38.89 6.13
4070 4192 9.247861 TCTGCTGATTATACAATATCTCAGCTA 57.752 33.333 21.67 13.68 46.42 3.32
4128 4250 6.015434 GGAAAAACTTGTATGGTCACCTTCAT 60.015 38.462 0.00 0.00 0.00 2.57
4162 4284 8.946085 TGTTCTTGTGGTGTTTAGATATGAATC 58.054 33.333 0.00 0.00 0.00 2.52
4212 4336 2.292267 CCAGTGTGCATTATCTCCACC 58.708 52.381 0.00 0.00 0.00 4.61
4257 4381 2.492025 ACTATGCCTCCATTCCCTTGA 58.508 47.619 0.00 0.00 32.85 3.02
4348 4485 9.891828 TCATACTTGTGTTATTTTTGTAGCAAG 57.108 29.630 0.00 0.00 38.30 4.01
4410 4549 5.808366 TCATTACGGAGCCTCTAATCATT 57.192 39.130 0.00 0.00 0.00 2.57
4526 4670 3.826466 CTCATTGCGAGCGACATATAGA 58.174 45.455 0.00 0.00 34.18 1.98
4541 4685 2.060050 ATAGAGCTCACCTACACGCT 57.940 50.000 17.77 0.00 35.03 5.07
4544 4688 2.048222 GCTCACCTACACGCTGCA 60.048 61.111 0.00 0.00 0.00 4.41
4547 4691 0.319900 CTCACCTACACGCTGCACTT 60.320 55.000 0.00 0.00 0.00 3.16
4571 4715 0.693092 GGGCTGGACCACCTATACCA 60.693 60.000 11.45 0.00 42.05 3.25
4652 4796 3.363084 CGTTCTTCTTTTTCGGCTCTGTC 60.363 47.826 0.00 0.00 0.00 3.51
4660 4804 1.996798 TTCGGCTCTGTCTATAGGGG 58.003 55.000 0.00 0.00 0.00 4.79
4705 4849 9.191995 CACCGACAAAAGCTAATTTTTAAATCT 57.808 29.630 0.00 0.00 39.11 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.147704 AGAACATATTTTGAAAAACCCGAACAT 58.852 29.630 0.00 0.00 0.00 2.71
2 3 7.493367 AGAACATATTTTGAAAAACCCGAACA 58.507 30.769 0.00 0.00 0.00 3.18
3 4 7.865889 AGAGAACATATTTTGAAAAACCCGAAC 59.134 33.333 0.00 0.00 0.00 3.95
4 5 7.865385 CAGAGAACATATTTTGAAAAACCCGAA 59.135 33.333 0.00 0.00 0.00 4.30
6 7 7.145323 ACAGAGAACATATTTTGAAAAACCCG 58.855 34.615 0.00 0.00 0.00 5.28
7 8 8.887036 AACAGAGAACATATTTTGAAAAACCC 57.113 30.769 0.00 0.00 0.00 4.11
123 124 9.820725 TCAAATTTTGAACATGAGATCACTTTT 57.179 25.926 9.36 0.00 36.59 2.27
124 125 9.820725 TTCAAATTTTGAACATGAGATCACTTT 57.179 25.926 18.29 0.00 44.21 2.66
150 151 9.971922 TTCCAAAATTGAAACACAAACATTTTT 57.028 22.222 0.00 0.00 42.03 1.94
293 294 9.339492 GCATTTTTCAAAAAGACAAACATCAAA 57.661 25.926 1.08 0.00 29.38 2.69
294 295 8.509690 TGCATTTTTCAAAAAGACAAACATCAA 58.490 25.926 1.08 0.00 29.38 2.57
295 296 8.037382 TGCATTTTTCAAAAAGACAAACATCA 57.963 26.923 1.08 0.00 29.38 3.07
296 297 9.505995 AATGCATTTTTCAAAAAGACAAACATC 57.494 25.926 5.99 0.00 29.38 3.06
298 299 9.985318 CTAATGCATTTTTCAAAAAGACAAACA 57.015 25.926 18.75 0.00 29.38 2.83
307 308 8.924691 GCAGTGTATCTAATGCATTTTTCAAAA 58.075 29.630 18.75 0.00 38.54 2.44
308 309 8.087136 TGCAGTGTATCTAATGCATTTTTCAAA 58.913 29.630 18.75 0.00 43.34 2.69
309 310 7.600960 TGCAGTGTATCTAATGCATTTTTCAA 58.399 30.769 18.75 0.00 43.34 2.69
310 311 7.155655 TGCAGTGTATCTAATGCATTTTTCA 57.844 32.000 18.75 7.67 43.34 2.69
317 318 4.273235 CGGATTTGCAGTGTATCTAATGCA 59.727 41.667 0.00 0.00 46.29 3.96
318 319 4.273480 ACGGATTTGCAGTGTATCTAATGC 59.727 41.667 0.00 0.00 39.14 3.56
319 320 5.991328 ACGGATTTGCAGTGTATCTAATG 57.009 39.130 0.00 0.00 0.00 1.90
320 321 5.690409 CGTACGGATTTGCAGTGTATCTAAT 59.310 40.000 7.57 0.00 0.00 1.73
321 322 5.038683 CGTACGGATTTGCAGTGTATCTAA 58.961 41.667 7.57 0.00 0.00 2.10
322 323 4.498513 CCGTACGGATTTGCAGTGTATCTA 60.499 45.833 30.64 0.00 37.50 1.98
323 324 3.444916 CGTACGGATTTGCAGTGTATCT 58.555 45.455 7.57 0.00 0.00 1.98
324 325 2.538449 CCGTACGGATTTGCAGTGTATC 59.462 50.000 30.64 0.00 37.50 2.24
325 326 2.546778 CCGTACGGATTTGCAGTGTAT 58.453 47.619 30.64 0.00 37.50 2.29
326 327 1.404449 CCCGTACGGATTTGCAGTGTA 60.404 52.381 35.41 0.00 37.50 2.90
327 328 0.672401 CCCGTACGGATTTGCAGTGT 60.672 55.000 35.41 0.00 37.50 3.55
328 329 0.672401 ACCCGTACGGATTTGCAGTG 60.672 55.000 35.41 17.06 37.50 3.66
329 330 0.896923 TACCCGTACGGATTTGCAGT 59.103 50.000 35.41 23.09 37.50 4.40
330 331 1.283736 GTACCCGTACGGATTTGCAG 58.716 55.000 35.41 18.54 37.50 4.41
331 332 0.607112 TGTACCCGTACGGATTTGCA 59.393 50.000 35.41 23.17 38.85 4.08
332 333 1.944032 ATGTACCCGTACGGATTTGC 58.056 50.000 35.41 21.00 38.85 3.68
333 334 4.311816 ACTATGTACCCGTACGGATTTG 57.688 45.455 35.41 20.41 38.85 2.32
334 335 5.343307 AAACTATGTACCCGTACGGATTT 57.657 39.130 35.41 20.32 38.85 2.17
335 336 5.343307 AAAACTATGTACCCGTACGGATT 57.657 39.130 35.41 22.84 38.85 3.01
336 337 5.343307 AAAAACTATGTACCCGTACGGAT 57.657 39.130 35.41 23.08 38.85 4.18
337 338 4.799564 AAAAACTATGTACCCGTACGGA 57.200 40.909 35.41 16.20 38.85 4.69
338 339 6.959671 TTTAAAAACTATGTACCCGTACGG 57.040 37.500 27.68 27.68 38.85 4.02
339 340 8.162245 GTCTTTTAAAAACTATGTACCCGTACG 58.838 37.037 8.69 8.69 38.85 3.67
340 341 9.208022 AGTCTTTTAAAAACTATGTACCCGTAC 57.792 33.333 1.66 0.00 36.63 3.67
341 342 9.206870 CAGTCTTTTAAAAACTATGTACCCGTA 57.793 33.333 1.66 0.00 0.00 4.02
342 343 7.716560 ACAGTCTTTTAAAAACTATGTACCCGT 59.283 33.333 1.66 0.00 0.00 5.28
343 344 8.013378 CACAGTCTTTTAAAAACTATGTACCCG 58.987 37.037 1.66 0.00 0.00 5.28
344 345 7.806487 GCACAGTCTTTTAAAAACTATGTACCC 59.194 37.037 16.07 4.07 0.00 3.69
345 346 8.565416 AGCACAGTCTTTTAAAAACTATGTACC 58.435 33.333 16.07 8.61 0.00 3.34
346 347 9.382244 CAGCACAGTCTTTTAAAAACTATGTAC 57.618 33.333 16.07 8.89 0.00 2.90
347 348 8.073768 GCAGCACAGTCTTTTAAAAACTATGTA 58.926 33.333 16.07 0.00 0.00 2.29
348 349 6.918022 GCAGCACAGTCTTTTAAAAACTATGT 59.082 34.615 16.07 10.41 0.00 2.29
349 350 7.141363 AGCAGCACAGTCTTTTAAAAACTATG 58.859 34.615 12.96 12.96 0.00 2.23
350 351 7.277174 AGCAGCACAGTCTTTTAAAAACTAT 57.723 32.000 1.66 0.00 0.00 2.12
351 352 6.693315 AGCAGCACAGTCTTTTAAAAACTA 57.307 33.333 1.66 0.00 0.00 2.24
352 353 5.582689 AGCAGCACAGTCTTTTAAAAACT 57.417 34.783 1.66 6.12 0.00 2.66
353 354 7.930513 ATAAGCAGCACAGTCTTTTAAAAAC 57.069 32.000 1.66 4.06 0.00 2.43
354 355 9.624697 CATATAAGCAGCACAGTCTTTTAAAAA 57.375 29.630 1.66 0.00 0.00 1.94
355 356 9.008965 TCATATAAGCAGCACAGTCTTTTAAAA 57.991 29.630 0.00 0.00 0.00 1.52
356 357 8.450964 GTCATATAAGCAGCACAGTCTTTTAAA 58.549 33.333 0.00 0.00 0.00 1.52
357 358 7.824289 AGTCATATAAGCAGCACAGTCTTTTAA 59.176 33.333 0.00 0.00 0.00 1.52
358 359 7.331026 AGTCATATAAGCAGCACAGTCTTTTA 58.669 34.615 0.00 0.00 0.00 1.52
359 360 6.176183 AGTCATATAAGCAGCACAGTCTTTT 58.824 36.000 0.00 0.00 0.00 2.27
360 361 5.738909 AGTCATATAAGCAGCACAGTCTTT 58.261 37.500 0.00 0.00 0.00 2.52
361 362 5.350504 AGTCATATAAGCAGCACAGTCTT 57.649 39.130 0.00 0.00 0.00 3.01
362 363 5.830457 TCTAGTCATATAAGCAGCACAGTCT 59.170 40.000 0.00 0.00 0.00 3.24
363 364 6.078202 TCTAGTCATATAAGCAGCACAGTC 57.922 41.667 0.00 0.00 0.00 3.51
364 365 6.097554 AGTTCTAGTCATATAAGCAGCACAGT 59.902 38.462 0.00 0.00 0.00 3.55
365 366 6.511416 AGTTCTAGTCATATAAGCAGCACAG 58.489 40.000 0.00 0.00 0.00 3.66
366 367 6.471233 AGTTCTAGTCATATAAGCAGCACA 57.529 37.500 0.00 0.00 0.00 4.57
367 368 7.492669 TCAAAGTTCTAGTCATATAAGCAGCAC 59.507 37.037 0.00 0.00 0.00 4.40
368 369 7.555965 TCAAAGTTCTAGTCATATAAGCAGCA 58.444 34.615 0.00 0.00 0.00 4.41
369 370 8.600449 ATCAAAGTTCTAGTCATATAAGCAGC 57.400 34.615 0.00 0.00 0.00 5.25
371 372 9.330063 CCAATCAAAGTTCTAGTCATATAAGCA 57.670 33.333 0.00 0.00 0.00 3.91
372 373 9.331282 ACCAATCAAAGTTCTAGTCATATAAGC 57.669 33.333 0.00 0.00 0.00 3.09
376 377 8.543774 ACAGACCAATCAAAGTTCTAGTCATAT 58.456 33.333 0.00 0.00 0.00 1.78
377 378 7.907389 ACAGACCAATCAAAGTTCTAGTCATA 58.093 34.615 0.00 0.00 0.00 2.15
378 379 6.773638 ACAGACCAATCAAAGTTCTAGTCAT 58.226 36.000 0.00 0.00 0.00 3.06
379 380 6.174720 ACAGACCAATCAAAGTTCTAGTCA 57.825 37.500 0.00 0.00 0.00 3.41
380 381 6.073003 CCAACAGACCAATCAAAGTTCTAGTC 60.073 42.308 0.00 0.00 0.00 2.59
381 382 5.765182 CCAACAGACCAATCAAAGTTCTAGT 59.235 40.000 0.00 0.00 0.00 2.57
382 383 5.335191 GCCAACAGACCAATCAAAGTTCTAG 60.335 44.000 0.00 0.00 0.00 2.43
383 384 4.518970 GCCAACAGACCAATCAAAGTTCTA 59.481 41.667 0.00 0.00 0.00 2.10
384 385 3.319122 GCCAACAGACCAATCAAAGTTCT 59.681 43.478 0.00 0.00 0.00 3.01
385 386 3.319122 AGCCAACAGACCAATCAAAGTTC 59.681 43.478 0.00 0.00 0.00 3.01
386 387 3.299503 AGCCAACAGACCAATCAAAGTT 58.700 40.909 0.00 0.00 0.00 2.66
387 388 2.949447 AGCCAACAGACCAATCAAAGT 58.051 42.857 0.00 0.00 0.00 2.66
388 389 4.201851 CGATAGCCAACAGACCAATCAAAG 60.202 45.833 0.00 0.00 0.00 2.77
389 390 3.689161 CGATAGCCAACAGACCAATCAAA 59.311 43.478 0.00 0.00 0.00 2.69
390 391 3.270027 CGATAGCCAACAGACCAATCAA 58.730 45.455 0.00 0.00 0.00 2.57
391 392 2.236146 ACGATAGCCAACAGACCAATCA 59.764 45.455 0.00 0.00 42.67 2.57
392 393 2.866762 GACGATAGCCAACAGACCAATC 59.133 50.000 0.00 0.00 42.67 2.67
393 394 2.501723 AGACGATAGCCAACAGACCAAT 59.498 45.455 0.00 0.00 42.67 3.16
394 395 1.899814 AGACGATAGCCAACAGACCAA 59.100 47.619 0.00 0.00 42.67 3.67
395 396 1.476891 GAGACGATAGCCAACAGACCA 59.523 52.381 0.00 0.00 42.67 4.02
396 397 1.534175 CGAGACGATAGCCAACAGACC 60.534 57.143 0.00 0.00 42.67 3.85
397 398 1.828832 CGAGACGATAGCCAACAGAC 58.171 55.000 0.00 0.00 42.67 3.51
398 399 0.100682 GCGAGACGATAGCCAACAGA 59.899 55.000 0.00 0.00 42.67 3.41
399 400 2.582959 GCGAGACGATAGCCAACAG 58.417 57.895 0.00 0.00 42.67 3.16
400 401 4.806571 GCGAGACGATAGCCAACA 57.193 55.556 0.00 0.00 42.67 3.33
411 412 2.128128 CGTTGTTGTGCGCGAGAC 60.128 61.111 12.10 5.93 0.00 3.36
412 413 2.278923 TCGTTGTTGTGCGCGAGA 60.279 55.556 12.10 0.00 0.00 4.04
413 414 2.168621 CTCGTTGTTGTGCGCGAG 59.831 61.111 12.10 0.00 43.42 5.03
414 415 2.278923 TCTCGTTGTTGTGCGCGA 60.279 55.556 12.10 0.00 0.00 5.87
415 416 2.168621 CTCTCGTTGTTGTGCGCG 59.831 61.111 0.00 0.00 0.00 6.86
416 417 0.942410 TACCTCTCGTTGTTGTGCGC 60.942 55.000 0.00 0.00 0.00 6.09
417 418 1.060713 CTACCTCTCGTTGTTGTGCG 58.939 55.000 0.00 0.00 0.00 5.34
418 419 1.270147 ACCTACCTCTCGTTGTTGTGC 60.270 52.381 0.00 0.00 0.00 4.57
419 420 2.404215 CACCTACCTCTCGTTGTTGTG 58.596 52.381 0.00 0.00 0.00 3.33
420 421 1.270147 GCACCTACCTCTCGTTGTTGT 60.270 52.381 0.00 0.00 0.00 3.32
421 422 1.429463 GCACCTACCTCTCGTTGTTG 58.571 55.000 0.00 0.00 0.00 3.33
422 423 0.038526 CGCACCTACCTCTCGTTGTT 60.039 55.000 0.00 0.00 0.00 2.83
423 424 1.585006 CGCACCTACCTCTCGTTGT 59.415 57.895 0.00 0.00 0.00 3.32
424 425 1.805945 GCGCACCTACCTCTCGTTG 60.806 63.158 0.30 0.00 0.00 4.10
425 426 2.572284 GCGCACCTACCTCTCGTT 59.428 61.111 0.30 0.00 0.00 3.85
426 427 3.812019 CGCGCACCTACCTCTCGT 61.812 66.667 8.75 0.00 0.00 4.18
428 429 2.907897 AATGCGCGCACCTACCTCTC 62.908 60.000 39.05 0.00 0.00 3.20
429 430 2.521958 AAATGCGCGCACCTACCTCT 62.522 55.000 39.05 15.90 0.00 3.69
430 431 1.644786 AAAATGCGCGCACCTACCTC 61.645 55.000 39.05 0.79 0.00 3.85
431 432 1.644786 GAAAATGCGCGCACCTACCT 61.645 55.000 39.05 17.70 0.00 3.08
432 433 1.226295 GAAAATGCGCGCACCTACC 60.226 57.895 39.05 20.35 0.00 3.18
433 434 1.226295 GGAAAATGCGCGCACCTAC 60.226 57.895 39.05 26.01 0.00 3.18
434 435 1.643868 CTGGAAAATGCGCGCACCTA 61.644 55.000 39.05 21.29 0.00 3.08
435 436 2.981560 CTGGAAAATGCGCGCACCT 61.982 57.895 39.05 24.32 0.00 4.00
436 437 1.917782 TACTGGAAAATGCGCGCACC 61.918 55.000 39.05 31.72 0.00 5.01
437 438 0.521242 CTACTGGAAAATGCGCGCAC 60.521 55.000 39.05 23.74 0.00 5.34
438 439 1.643868 CCTACTGGAAAATGCGCGCA 61.644 55.000 38.27 38.27 34.57 6.09
439 440 1.062525 CCTACTGGAAAATGCGCGC 59.937 57.895 27.26 27.26 34.57 6.86
440 441 0.096976 CACCTACTGGAAAATGCGCG 59.903 55.000 0.00 0.00 37.04 6.86
441 442 1.130561 GACACCTACTGGAAAATGCGC 59.869 52.381 0.00 0.00 37.04 6.09
442 443 2.416547 CAGACACCTACTGGAAAATGCG 59.583 50.000 0.00 0.00 37.04 4.73
443 444 3.412386 ACAGACACCTACTGGAAAATGC 58.588 45.455 0.00 0.00 39.38 3.56
444 445 4.625742 CGTACAGACACCTACTGGAAAATG 59.374 45.833 0.00 0.00 39.38 2.32
445 446 4.322499 CCGTACAGACACCTACTGGAAAAT 60.322 45.833 0.00 0.00 39.38 1.82
446 447 3.006110 CCGTACAGACACCTACTGGAAAA 59.994 47.826 0.00 0.00 39.38 2.29
447 448 2.559668 CCGTACAGACACCTACTGGAAA 59.440 50.000 0.00 0.00 39.38 3.13
448 449 2.165167 CCGTACAGACACCTACTGGAA 58.835 52.381 0.00 0.00 39.38 3.53
449 450 1.615116 CCCGTACAGACACCTACTGGA 60.615 57.143 0.00 0.00 39.38 3.86
450 451 0.815734 CCCGTACAGACACCTACTGG 59.184 60.000 0.00 0.00 39.38 4.00
451 452 1.542492 ACCCGTACAGACACCTACTG 58.458 55.000 0.00 0.00 40.68 2.74
452 453 2.165998 GAACCCGTACAGACACCTACT 58.834 52.381 0.00 0.00 0.00 2.57
453 454 1.135575 CGAACCCGTACAGACACCTAC 60.136 57.143 0.00 0.00 0.00 3.18
454 455 1.167851 CGAACCCGTACAGACACCTA 58.832 55.000 0.00 0.00 0.00 3.08
455 456 0.538057 TCGAACCCGTACAGACACCT 60.538 55.000 0.00 0.00 37.05 4.00
456 457 0.529378 ATCGAACCCGTACAGACACC 59.471 55.000 0.00 0.00 37.05 4.16
457 458 2.257034 GAATCGAACCCGTACAGACAC 58.743 52.381 0.00 0.00 37.05 3.67
458 459 1.203052 GGAATCGAACCCGTACAGACA 59.797 52.381 0.00 0.00 37.05 3.41
459 460 1.470458 GGGAATCGAACCCGTACAGAC 60.470 57.143 13.87 0.00 37.85 3.51
460 461 0.819582 GGGAATCGAACCCGTACAGA 59.180 55.000 13.87 0.00 37.85 3.41
461 462 3.357504 GGGAATCGAACCCGTACAG 57.642 57.895 13.87 0.00 37.85 2.74
467 468 1.201424 ACCTACTGGGAATCGAACCC 58.799 55.000 19.94 19.94 46.87 4.11
468 469 3.896272 AGATACCTACTGGGAATCGAACC 59.104 47.826 0.00 0.00 35.95 3.62
469 470 4.341520 ACAGATACCTACTGGGAATCGAAC 59.658 45.833 0.00 0.00 39.38 3.95
470 471 4.543689 ACAGATACCTACTGGGAATCGAA 58.456 43.478 0.00 0.00 39.38 3.71
471 472 4.180377 ACAGATACCTACTGGGAATCGA 57.820 45.455 0.00 0.00 39.38 3.59
472 473 5.105716 CCATACAGATACCTACTGGGAATCG 60.106 48.000 0.00 0.00 39.38 3.34
473 474 5.780793 ACCATACAGATACCTACTGGGAATC 59.219 44.000 0.00 0.00 39.38 2.52
474 475 5.727630 ACCATACAGATACCTACTGGGAAT 58.272 41.667 0.00 0.00 39.38 3.01
475 476 5.152306 ACCATACAGATACCTACTGGGAA 57.848 43.478 0.00 0.00 39.38 3.97
476 477 4.827036 ACCATACAGATACCTACTGGGA 57.173 45.455 0.00 0.00 39.38 4.37
477 478 5.017490 CCTACCATACAGATACCTACTGGG 58.983 50.000 0.00 0.00 39.38 4.45
478 479 5.642165 ACCTACCATACAGATACCTACTGG 58.358 45.833 0.00 0.00 39.38 4.00
479 480 6.885376 CCTACCTACCATACAGATACCTACTG 59.115 46.154 0.00 0.00 40.68 2.74
480 481 6.565703 ACCTACCTACCATACAGATACCTACT 59.434 42.308 0.00 0.00 0.00 2.57
481 482 6.658391 CACCTACCTACCATACAGATACCTAC 59.342 46.154 0.00 0.00 0.00 3.18
482 483 6.749196 GCACCTACCTACCATACAGATACCTA 60.749 46.154 0.00 0.00 0.00 3.08
483 484 5.642165 CACCTACCTACCATACAGATACCT 58.358 45.833 0.00 0.00 0.00 3.08
484 485 4.220163 GCACCTACCTACCATACAGATACC 59.780 50.000 0.00 0.00 0.00 2.73
485 486 4.082895 CGCACCTACCTACCATACAGATAC 60.083 50.000 0.00 0.00 0.00 2.24
486 487 4.077108 CGCACCTACCTACCATACAGATA 58.923 47.826 0.00 0.00 0.00 1.98
487 488 2.891580 CGCACCTACCTACCATACAGAT 59.108 50.000 0.00 0.00 0.00 2.90
488 489 2.304092 CGCACCTACCTACCATACAGA 58.696 52.381 0.00 0.00 0.00 3.41
489 490 2.029623 ACGCACCTACCTACCATACAG 58.970 52.381 0.00 0.00 0.00 2.74
490 491 1.752498 CACGCACCTACCTACCATACA 59.248 52.381 0.00 0.00 0.00 2.29
491 492 1.537562 GCACGCACCTACCTACCATAC 60.538 57.143 0.00 0.00 0.00 2.39
492 493 0.748450 GCACGCACCTACCTACCATA 59.252 55.000 0.00 0.00 0.00 2.74
493 494 1.261938 TGCACGCACCTACCTACCAT 61.262 55.000 0.00 0.00 0.00 3.55
494 495 1.261938 ATGCACGCACCTACCTACCA 61.262 55.000 0.00 0.00 0.00 3.25
495 496 0.107848 AATGCACGCACCTACCTACC 60.108 55.000 0.00 0.00 0.00 3.18
496 497 1.734163 AAATGCACGCACCTACCTAC 58.266 50.000 0.00 0.00 0.00 3.18
497 498 2.352388 GAAAATGCACGCACCTACCTA 58.648 47.619 0.00 0.00 0.00 3.08
498 499 1.165270 GAAAATGCACGCACCTACCT 58.835 50.000 0.00 0.00 0.00 3.08
499 500 0.170339 GGAAAATGCACGCACCTACC 59.830 55.000 0.00 0.00 0.00 3.18
500 501 0.878416 TGGAAAATGCACGCACCTAC 59.122 50.000 0.00 0.00 0.00 3.18
501 502 1.164411 CTGGAAAATGCACGCACCTA 58.836 50.000 0.00 0.00 0.00 3.08
502 503 0.823356 ACTGGAAAATGCACGCACCT 60.823 50.000 0.00 0.00 0.00 4.00
503 504 0.878416 TACTGGAAAATGCACGCACC 59.122 50.000 0.00 0.00 0.00 5.01
504 505 1.135689 CCTACTGGAAAATGCACGCAC 60.136 52.381 0.00 0.00 34.57 5.34
505 506 1.164411 CCTACTGGAAAATGCACGCA 58.836 50.000 0.00 0.00 34.57 5.24
506 507 1.135689 CACCTACTGGAAAATGCACGC 60.136 52.381 0.00 0.00 37.04 5.34
507 508 1.135689 GCACCTACTGGAAAATGCACG 60.136 52.381 0.00 0.00 33.42 5.34
508 509 1.135689 CGCACCTACTGGAAAATGCAC 60.136 52.381 0.00 0.00 32.96 4.57
509 510 1.164411 CGCACCTACTGGAAAATGCA 58.836 50.000 0.00 0.00 32.96 3.96
510 511 0.179163 GCGCACCTACTGGAAAATGC 60.179 55.000 0.30 0.00 37.04 3.56
511 512 1.135689 GTGCGCACCTACTGGAAAATG 60.136 52.381 30.12 0.00 37.04 2.32
512 513 1.165270 GTGCGCACCTACTGGAAAAT 58.835 50.000 30.12 0.00 37.04 1.82
513 514 0.179043 TGTGCGCACCTACTGGAAAA 60.179 50.000 35.72 11.96 37.04 2.29
514 515 0.882927 GTGTGCGCACCTACTGGAAA 60.883 55.000 35.72 12.75 39.61 3.13
515 516 1.301401 GTGTGCGCACCTACTGGAA 60.301 57.895 35.72 13.53 39.61 3.53
516 517 1.754380 AAGTGTGCGCACCTACTGGA 61.754 55.000 35.72 14.34 46.35 3.86
517 518 1.291877 GAAGTGTGCGCACCTACTGG 61.292 60.000 35.72 0.00 46.35 4.00
518 519 0.599991 TGAAGTGTGCGCACCTACTG 60.600 55.000 35.72 0.00 46.35 2.74
519 520 0.321671 ATGAAGTGTGCGCACCTACT 59.678 50.000 35.72 29.18 46.35 2.57
520 521 0.443869 CATGAAGTGTGCGCACCTAC 59.556 55.000 35.72 27.48 46.35 3.18
521 522 0.034756 ACATGAAGTGTGCGCACCTA 59.965 50.000 35.72 17.55 46.35 3.08
522 523 1.227943 ACATGAAGTGTGCGCACCT 60.228 52.632 35.72 27.76 46.35 4.00
523 524 1.207593 GACATGAAGTGTGCGCACC 59.792 57.895 35.72 26.08 46.35 5.01
524 525 0.110509 CAGACATGAAGTGTGCGCAC 60.111 55.000 33.11 33.11 42.36 5.34
525 526 0.532640 ACAGACATGAAGTGTGCGCA 60.533 50.000 5.66 5.66 44.89 6.09
526 527 1.126846 GTACAGACATGAAGTGTGCGC 59.873 52.381 0.00 0.00 44.89 6.09
527 528 1.386748 CGTACAGACATGAAGTGTGCG 59.613 52.381 17.15 17.15 44.89 5.34
528 529 1.726791 CCGTACAGACATGAAGTGTGC 59.273 52.381 0.00 2.41 44.89 4.57
529 530 2.288825 ACCCGTACAGACATGAAGTGTG 60.289 50.000 0.00 0.00 46.33 3.82
530 531 1.968493 ACCCGTACAGACATGAAGTGT 59.032 47.619 0.00 2.02 45.83 3.55
531 532 2.743636 ACCCGTACAGACATGAAGTG 57.256 50.000 0.00 0.00 0.00 3.16
532 533 2.352421 CGAACCCGTACAGACATGAAGT 60.352 50.000 0.00 0.00 0.00 3.01
533 534 2.094906 TCGAACCCGTACAGACATGAAG 60.095 50.000 0.00 0.00 37.05 3.02
534 535 1.887854 TCGAACCCGTACAGACATGAA 59.112 47.619 0.00 0.00 37.05 2.57
535 536 1.536940 TCGAACCCGTACAGACATGA 58.463 50.000 0.00 0.00 37.05 3.07
536 537 2.579207 ATCGAACCCGTACAGACATG 57.421 50.000 0.00 0.00 37.05 3.21
537 538 2.159142 GGAATCGAACCCGTACAGACAT 60.159 50.000 0.00 0.00 37.05 3.06
538 539 1.203052 GGAATCGAACCCGTACAGACA 59.797 52.381 0.00 0.00 37.05 3.41
539 540 1.470458 GGGAATCGAACCCGTACAGAC 60.470 57.143 13.87 0.00 37.85 3.51
540 541 0.819582 GGGAATCGAACCCGTACAGA 59.180 55.000 13.87 0.00 37.85 3.41
541 542 3.357504 GGGAATCGAACCCGTACAG 57.642 57.895 13.87 0.00 37.85 2.74
547 548 1.134491 CACCTACTGGGAATCGAACCC 60.134 57.143 19.94 19.94 46.87 4.11
548 549 1.742750 GCACCTACTGGGAATCGAACC 60.743 57.143 0.00 0.00 38.76 3.62
549 550 1.653151 GCACCTACTGGGAATCGAAC 58.347 55.000 0.00 0.00 38.76 3.95
550 551 0.174845 CGCACCTACTGGGAATCGAA 59.825 55.000 0.00 0.00 38.76 3.71
551 552 1.813859 CGCACCTACTGGGAATCGA 59.186 57.895 0.00 0.00 38.76 3.59
552 553 1.883084 GCGCACCTACTGGGAATCG 60.883 63.158 0.30 0.00 38.76 3.34
553 554 1.883084 CGCGCACCTACTGGGAATC 60.883 63.158 8.75 0.00 38.76 2.52
554 555 2.186903 CGCGCACCTACTGGGAAT 59.813 61.111 8.75 0.00 38.76 3.01
555 556 4.752879 GCGCGCACCTACTGGGAA 62.753 66.667 29.10 0.00 38.76 3.97
557 558 4.838152 ATGCGCGCACCTACTGGG 62.838 66.667 39.05 0.00 41.89 4.45
558 559 1.922135 AAAATGCGCGCACCTACTGG 61.922 55.000 39.05 0.00 39.83 4.00
559 560 0.521242 GAAAATGCGCGCACCTACTG 60.521 55.000 39.05 0.00 0.00 2.74
560 561 1.644786 GGAAAATGCGCGCACCTACT 61.645 55.000 39.05 18.60 0.00 2.57
561 562 1.226295 GGAAAATGCGCGCACCTAC 60.226 57.895 39.05 26.01 0.00 3.18
562 563 0.958382 AAGGAAAATGCGCGCACCTA 60.958 50.000 39.05 14.97 0.00 3.08
563 564 1.805428 AAAGGAAAATGCGCGCACCT 61.805 50.000 39.05 33.31 0.00 4.00
564 565 0.943835 AAAAGGAAAATGCGCGCACC 60.944 50.000 39.05 31.55 0.00 5.01
565 566 0.858583 AAAAAGGAAAATGCGCGCAC 59.141 45.000 39.05 23.74 0.00 5.34
566 567 3.280920 AAAAAGGAAAATGCGCGCA 57.719 42.105 38.27 38.27 0.00 6.09
587 588 5.592282 TGCAGTGTATCAAGGAACTGAAAAA 59.408 36.000 5.87 0.00 42.09 1.94
588 589 5.008613 GTGCAGTGTATCAAGGAACTGAAAA 59.991 40.000 5.87 0.00 42.09 2.29
589 590 4.515191 GTGCAGTGTATCAAGGAACTGAAA 59.485 41.667 5.87 0.00 42.09 2.69
590 591 4.065088 GTGCAGTGTATCAAGGAACTGAA 58.935 43.478 5.87 0.00 42.09 3.02
591 592 3.664107 GTGCAGTGTATCAAGGAACTGA 58.336 45.455 5.87 0.00 42.09 3.41
592 593 2.413112 CGTGCAGTGTATCAAGGAACTG 59.587 50.000 0.00 0.00 40.86 3.16
594 595 2.412089 GTCGTGCAGTGTATCAAGGAAC 59.588 50.000 0.00 0.00 0.00 3.62
595 596 2.299013 AGTCGTGCAGTGTATCAAGGAA 59.701 45.455 0.00 0.00 0.00 3.36
596 597 1.893137 AGTCGTGCAGTGTATCAAGGA 59.107 47.619 0.00 0.00 0.00 3.36
597 598 1.995484 CAGTCGTGCAGTGTATCAAGG 59.005 52.381 0.00 0.00 0.00 3.61
624 625 4.704833 TCAAGCTGACTGGGCCGC 62.705 66.667 0.00 0.00 0.00 6.53
625 626 2.743928 GTCAAGCTGACTGGGCCG 60.744 66.667 0.00 0.00 43.73 6.13
626 627 2.743928 CGTCAAGCTGACTGGGCC 60.744 66.667 0.00 0.00 44.85 5.80
627 628 3.426568 GCGTCAAGCTGACTGGGC 61.427 66.667 12.45 6.76 44.85 5.36
628 629 1.165907 TTTGCGTCAAGCTGACTGGG 61.166 55.000 12.45 1.84 44.85 4.45
629 630 0.662619 TTTTGCGTCAAGCTGACTGG 59.337 50.000 12.45 2.38 44.85 4.00
630 631 2.313234 CATTTTGCGTCAAGCTGACTG 58.687 47.619 12.45 8.36 44.85 3.51
631 632 1.335324 GCATTTTGCGTCAAGCTGACT 60.335 47.619 12.45 0.00 44.85 3.41
643 644 2.477863 GGTCCTATGTGACGCATTTTGC 60.478 50.000 6.84 0.00 40.69 3.68
644 645 3.009723 AGGTCCTATGTGACGCATTTTG 58.990 45.455 6.84 0.00 38.94 2.44
645 646 3.270877 GAGGTCCTATGTGACGCATTTT 58.729 45.455 6.84 0.00 38.94 1.82
646 647 2.420129 GGAGGTCCTATGTGACGCATTT 60.420 50.000 6.84 0.00 38.94 2.32
647 648 1.139058 GGAGGTCCTATGTGACGCATT 59.861 52.381 6.84 0.00 38.94 3.56
648 649 0.753262 GGAGGTCCTATGTGACGCAT 59.247 55.000 6.73 6.73 41.42 4.73
649 650 1.327690 GGGAGGTCCTATGTGACGCA 61.328 60.000 0.00 0.00 36.07 5.24
650 651 1.043673 AGGGAGGTCCTATGTGACGC 61.044 60.000 0.00 0.00 45.98 5.19
651 652 3.209091 AGGGAGGTCCTATGTGACG 57.791 57.895 0.00 0.00 45.98 4.35
668 669 1.381928 AATGGATGCTCTGCCGCAAG 61.382 55.000 0.00 0.00 44.06 4.01
669 670 0.107263 TAATGGATGCTCTGCCGCAA 60.107 50.000 0.00 0.00 44.06 4.85
670 671 0.109153 ATAATGGATGCTCTGCCGCA 59.891 50.000 0.00 0.00 45.10 5.69
671 672 2.005451 CTATAATGGATGCTCTGCCGC 58.995 52.381 0.00 0.00 0.00 6.53
672 673 2.005451 GCTATAATGGATGCTCTGCCG 58.995 52.381 0.00 0.00 0.00 5.69
673 674 3.063510 TGCTATAATGGATGCTCTGCC 57.936 47.619 0.00 0.00 0.00 4.85
674 675 5.443185 TTTTGCTATAATGGATGCTCTGC 57.557 39.130 0.00 0.00 0.00 4.26
697 698 8.615211 GCTGTTTCCTTCATTTGAATTTTTCTT 58.385 29.630 0.00 0.00 33.01 2.52
698 699 7.989170 AGCTGTTTCCTTCATTTGAATTTTTCT 59.011 29.630 0.00 0.00 33.01 2.52
699 700 8.146479 AGCTGTTTCCTTCATTTGAATTTTTC 57.854 30.769 0.00 0.00 33.01 2.29
700 701 9.783081 ATAGCTGTTTCCTTCATTTGAATTTTT 57.217 25.926 0.00 0.00 33.01 1.94
704 705 9.638176 AGATATAGCTGTTTCCTTCATTTGAAT 57.362 29.630 0.00 0.00 33.01 2.57
705 706 9.466497 AAGATATAGCTGTTTCCTTCATTTGAA 57.534 29.630 0.00 0.00 0.00 2.69
706 707 8.896744 CAAGATATAGCTGTTTCCTTCATTTGA 58.103 33.333 0.00 0.00 0.00 2.69
707 708 8.133627 CCAAGATATAGCTGTTTCCTTCATTTG 58.866 37.037 0.00 0.00 0.00 2.32
708 709 7.836183 ACCAAGATATAGCTGTTTCCTTCATTT 59.164 33.333 0.00 0.00 0.00 2.32
709 710 7.349598 ACCAAGATATAGCTGTTTCCTTCATT 58.650 34.615 0.00 0.00 0.00 2.57
710 711 6.904626 ACCAAGATATAGCTGTTTCCTTCAT 58.095 36.000 0.00 0.00 0.00 2.57
711 712 6.313519 ACCAAGATATAGCTGTTTCCTTCA 57.686 37.500 0.00 0.00 0.00 3.02
712 713 6.706716 GGTACCAAGATATAGCTGTTTCCTTC 59.293 42.308 7.15 0.00 0.00 3.46
713 714 6.387220 AGGTACCAAGATATAGCTGTTTCCTT 59.613 38.462 15.94 0.00 0.00 3.36
714 715 5.905913 AGGTACCAAGATATAGCTGTTTCCT 59.094 40.000 15.94 0.00 0.00 3.36
715 716 5.992217 CAGGTACCAAGATATAGCTGTTTCC 59.008 44.000 15.94 0.00 40.45 3.13
716 717 5.992217 CCAGGTACCAAGATATAGCTGTTTC 59.008 44.000 15.94 0.00 42.67 2.78
717 718 5.163195 CCCAGGTACCAAGATATAGCTGTTT 60.163 44.000 15.94 0.00 42.67 2.83
718 719 4.348168 CCCAGGTACCAAGATATAGCTGTT 59.652 45.833 15.94 0.00 42.67 3.16
719 720 3.904339 CCCAGGTACCAAGATATAGCTGT 59.096 47.826 15.94 0.00 42.67 4.40
720 721 3.307059 GCCCAGGTACCAAGATATAGCTG 60.307 52.174 15.94 0.00 43.44 4.24
721 722 2.907042 GCCCAGGTACCAAGATATAGCT 59.093 50.000 15.94 0.00 0.00 3.32
722 723 2.027100 GGCCCAGGTACCAAGATATAGC 60.027 54.545 15.94 5.00 0.00 2.97
723 724 3.248024 TGGCCCAGGTACCAAGATATAG 58.752 50.000 15.94 0.00 31.46 1.31
724 725 3.354233 TGGCCCAGGTACCAAGATATA 57.646 47.619 15.94 0.00 31.46 0.86
725 726 2.206322 TGGCCCAGGTACCAAGATAT 57.794 50.000 15.94 0.00 31.46 1.63
726 727 2.206322 ATGGCCCAGGTACCAAGATA 57.794 50.000 15.94 0.00 39.96 1.98
727 728 2.206322 TATGGCCCAGGTACCAAGAT 57.794 50.000 15.94 0.00 39.96 2.40
728 729 1.774254 CATATGGCCCAGGTACCAAGA 59.226 52.381 15.94 0.00 39.96 3.02
729 730 1.494721 ACATATGGCCCAGGTACCAAG 59.505 52.381 15.94 6.00 39.96 3.61
730 731 1.602440 ACATATGGCCCAGGTACCAA 58.398 50.000 15.94 0.00 39.96 3.67
755 756 0.108472 GAAAAGGCCCAATGAGCAGC 60.108 55.000 0.00 0.00 0.00 5.25
757 758 1.259609 CTGAAAAGGCCCAATGAGCA 58.740 50.000 0.00 0.00 0.00 4.26
774 775 9.288576 TGTAGATGATATCTTTTTAATGGCCTG 57.711 33.333 3.32 0.00 40.76 4.85
784 785 7.255730 GCAGGCCAAATGTAGATGATATCTTTT 60.256 37.037 5.01 0.00 40.76 2.27
792 793 4.502105 TTAGCAGGCCAAATGTAGATGA 57.498 40.909 5.01 0.00 0.00 2.92
798 799 2.497273 GGTCATTTAGCAGGCCAAATGT 59.503 45.455 20.00 0.00 41.06 2.71
821 822 4.402793 TGACGAGAGGAAAGGAATAAGGAG 59.597 45.833 0.00 0.00 0.00 3.69
855 860 1.081840 GCTTTGCGTTGTGGAGCTC 60.082 57.895 4.71 4.71 0.00 4.09
927 932 2.841988 GCCTCCGCCTCCATCTCT 60.842 66.667 0.00 0.00 0.00 3.10
957 962 2.509561 GGAACTCGCTCCTTCCGC 60.510 66.667 0.00 0.00 32.21 5.54
1311 1316 4.072131 AGCACAAAAATCGCCTAGAAAGA 58.928 39.130 0.00 0.00 0.00 2.52
1376 1381 3.574396 CACTTCTCTCCACCTACAAGTCA 59.426 47.826 0.00 0.00 0.00 3.41
1403 1408 2.355007 GTTTGCCTCCATTGGGAAATGG 60.355 50.000 10.61 10.61 46.27 3.16
1563 1568 3.819368 TGCATGATCCGGATAACAACAT 58.181 40.909 19.15 13.27 0.00 2.71
1626 1635 5.999205 TGCCATGGAAAGAACAATAACAT 57.001 34.783 18.40 0.00 0.00 2.71
1641 1650 3.243805 TGAAACTGACACAAATGCCATGG 60.244 43.478 7.63 7.63 0.00 3.66
1654 1663 3.214328 ACAGGTGTTCCATGAAACTGAC 58.786 45.455 0.00 0.00 35.89 3.51
1749 1841 9.500785 TGCAGTGCTAACAATATATATTTAGCA 57.499 29.630 24.97 24.97 38.59 3.49
1755 1847 6.715280 AGGCTGCAGTGCTAACAATATATAT 58.285 36.000 17.60 0.00 0.00 0.86
1776 1868 7.011576 GGATAACTAAAGTAGAGCAAAGAAGGC 59.988 40.741 0.00 0.00 0.00 4.35
1785 1877 6.274579 GGTGACAGGATAACTAAAGTAGAGC 58.725 44.000 0.00 0.00 0.00 4.09
1790 1882 4.381718 GCTCGGTGACAGGATAACTAAAGT 60.382 45.833 0.00 0.00 0.00 2.66
1809 1902 0.179097 GCTCTAGGTCCAAAGGCTCG 60.179 60.000 0.00 0.00 0.00 5.03
1985 2084 7.065204 GTGTGGCAGATTCCTTTTAAACAAAAA 59.935 33.333 0.00 0.00 35.74 1.94
2137 2236 6.071108 GCATACCAGCTCTGATCTTCCTTATA 60.071 42.308 0.00 0.00 0.00 0.98
2197 2296 1.065551 GTTGCCTCAAACACACCAGAC 59.934 52.381 0.00 0.00 0.00 3.51
2203 2302 2.997980 TCTGAAGTTGCCTCAAACACA 58.002 42.857 0.00 0.00 32.21 3.72
2334 2433 9.004231 ACCTAAGATAGACCAAAACCTGATAAT 57.996 33.333 0.00 0.00 0.00 1.28
2352 2451 8.909423 TGGGGAAATTAATTTGAACCTAAGAT 57.091 30.769 17.98 0.00 0.00 2.40
2365 2465 7.523415 ACGTAGGTAATCATGGGGAAATTAAT 58.477 34.615 0.00 0.00 0.00 1.40
2367 2467 6.503560 ACGTAGGTAATCATGGGGAAATTA 57.496 37.500 0.00 0.00 0.00 1.40
2369 2469 6.697641 ATACGTAGGTAATCATGGGGAAAT 57.302 37.500 0.08 0.00 31.15 2.17
2372 2472 7.801893 ATTAATACGTAGGTAATCATGGGGA 57.198 36.000 0.08 0.00 31.15 4.81
2504 2606 4.332819 CAGAACCAAACTCTTCTGAAACGT 59.667 41.667 1.86 0.00 44.22 3.99
2535 2637 4.326826 TCAGAAAATTCAGCTTCCGTCAT 58.673 39.130 0.00 0.00 0.00 3.06
2618 2720 4.387026 AAGACATTTGGGGTTGAGATCA 57.613 40.909 0.00 0.00 0.00 2.92
2621 2723 4.453480 AGAAAGACATTTGGGGTTGAGA 57.547 40.909 0.00 0.00 0.00 3.27
2839 2941 1.735700 CGAGCCAGCGAGACATTGTAA 60.736 52.381 0.00 0.00 0.00 2.41
2851 2953 2.897641 CTAGTCCAGCACGAGCCAGC 62.898 65.000 0.00 0.00 43.56 4.85
2944 3046 1.600916 GAAGGGACTGTGTGGTGCC 60.601 63.158 0.00 0.00 46.08 5.01
3069 3171 4.961438 AAATCAGCATTTGGTTCCAAGT 57.039 36.364 4.44 0.00 30.49 3.16
3178 3280 0.032130 CATTGATGATGCTGCCTGGC 59.968 55.000 12.87 12.87 0.00 4.85
3240 3342 2.305635 ACAGGTGCAGGATACATGTCAA 59.694 45.455 0.00 0.00 38.53 3.18
3604 3706 5.064579 GCTCATCAGCTTACTCCTCTTTTTC 59.935 44.000 0.00 0.00 43.09 2.29
3660 3762 1.023513 GCCGAAGCAGCTCTTGACAT 61.024 55.000 0.00 0.00 39.53 3.06
4043 4165 8.183830 GCTGAGATATTGTATAATCAGCAGAC 57.816 38.462 17.48 3.59 45.81 3.51
4070 4192 2.428171 ACTTGCAAGCAAACAGTCATGT 59.572 40.909 26.27 0.00 43.15 3.21
4110 4232 5.003160 TGACAATGAAGGTGACCATACAAG 58.997 41.667 3.63 1.39 0.00 3.16
4128 4250 5.398603 AACACCACAAGAACAAATGACAA 57.601 34.783 0.00 0.00 0.00 3.18
4212 4336 3.865745 GCATGTACAGCTACAACCTACAG 59.134 47.826 0.33 0.00 36.43 2.74
4267 4391 3.941483 ACAATTCTCAAATGGAGCCGTAG 59.059 43.478 0.00 0.00 43.70 3.51
4268 4392 3.689161 CACAATTCTCAAATGGAGCCGTA 59.311 43.478 0.00 0.00 43.70 4.02
4270 4394 2.489329 ACACAATTCTCAAATGGAGCCG 59.511 45.455 0.00 0.00 43.70 5.52
4277 4412 6.017192 TCACAACGATGACACAATTCTCAAAT 60.017 34.615 0.00 0.00 0.00 2.32
4280 4415 4.376146 TCACAACGATGACACAATTCTCA 58.624 39.130 0.00 0.00 0.00 3.27
4348 4485 5.243981 AGCACCATCTATCATAAGCATGAC 58.756 41.667 0.00 0.00 43.89 3.06
4362 4499 2.639839 ACACAACCTCTAAGCACCATCT 59.360 45.455 0.00 0.00 0.00 2.90
4410 4549 1.762370 TCTTGTCTGGAGAACTGTGCA 59.238 47.619 0.00 0.00 0.00 4.57
4519 4663 3.504134 AGCGTGTAGGTGAGCTCTATATG 59.496 47.826 16.19 4.36 34.48 1.78
4531 4675 0.319900 CTGAAGTGCAGCGTGTAGGT 60.320 55.000 0.00 0.00 37.90 3.08
4571 4715 5.763204 CCTACACACAAAACCAAGACATACT 59.237 40.000 0.00 0.00 0.00 2.12
4652 4796 1.476007 AAGCAGCCGAGCCCCTATAG 61.476 60.000 0.00 0.00 34.23 1.31


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.