Multiple sequence alignment - TraesCS7B01G034400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G034400 chr7B 100.000 3813 0 0 1 3813 33886539 33882727 0.000000e+00 7042
1 TraesCS7B01G034400 chr7B 95.230 587 26 2 1 585 203603282 203603868 0.000000e+00 928
2 TraesCS7B01G034400 chr7B 94.280 507 29 0 3307 3813 369908889 369908383 0.000000e+00 776
3 TraesCS7B01G034400 chr7A 89.671 881 56 17 755 1617 85602533 85601670 0.000000e+00 1090
4 TraesCS7B01G034400 chr7A 91.076 706 42 10 2386 3089 85601061 85600375 0.000000e+00 935
5 TraesCS7B01G034400 chr7A 85.047 428 37 15 1678 2088 85601671 85601254 9.860000e-111 411
6 TraesCS7B01G034400 chr7A 92.763 152 10 1 2232 2383 85601251 85601101 6.410000e-53 219
7 TraesCS7B01G034400 chr7D 90.651 845 41 13 755 1581 84237263 84236439 0.000000e+00 1088
8 TraesCS7B01G034400 chr7D 87.771 875 55 26 2167 3026 84235860 84235023 0.000000e+00 976
9 TraesCS7B01G034400 chr7D 88.086 512 37 13 1665 2164 84236407 84235908 1.530000e-163 586
10 TraesCS7B01G034400 chr7D 83.812 383 34 15 2228 2605 610615189 610615548 4.720000e-89 339
11 TraesCS7B01G034400 chr7D 88.333 180 18 1 2619 2798 610615630 610615806 2.980000e-51 213
12 TraesCS7B01G034400 chr2B 95.939 591 22 2 1 590 76511041 76511630 0.000000e+00 957
13 TraesCS7B01G034400 chr2B 95.416 589 26 1 1 588 161811921 161812509 0.000000e+00 937
14 TraesCS7B01G034400 chr2B 98.028 507 10 0 3307 3813 370691345 370690839 0.000000e+00 881
15 TraesCS7B01G034400 chr2B 94.477 507 28 0 3307 3813 198792013 198791507 0.000000e+00 782
16 TraesCS7B01G034400 chr2B 93.676 506 32 0 3308 3813 489059961 489059456 0.000000e+00 758
17 TraesCS7B01G034400 chr2B 93.491 507 33 0 3307 3813 463188256 463188762 0.000000e+00 754
18 TraesCS7B01G034400 chr6B 95.763 590 24 1 1 589 635287360 635287949 0.000000e+00 950
19 TraesCS7B01G034400 chr6B 94.604 593 28 2 1 589 174951945 174951353 0.000000e+00 915
20 TraesCS7B01G034400 chr5B 95.660 576 21 3 16 588 516273270 516272696 0.000000e+00 922
21 TraesCS7B01G034400 chr5B 94.224 606 30 4 1 602 396072498 396071894 0.000000e+00 920
22 TraesCS7B01G034400 chr5B 93.886 507 30 1 3307 3813 367619540 367619035 0.000000e+00 763
23 TraesCS7B01G034400 chr5B 93.478 506 33 0 3308 3813 430489954 430489449 0.000000e+00 752
24 TraesCS7B01G034400 chr1B 95.494 577 24 2 16 591 670669357 670669932 0.000000e+00 920
25 TraesCS7B01G034400 chr3B 94.907 589 27 2 1 588 478633702 478633116 0.000000e+00 918
26 TraesCS7B01G034400 chr3B 93.307 508 32 2 3307 3813 613522489 613522995 0.000000e+00 749
27 TraesCS7B01G034400 chr4B 93.688 507 32 0 3307 3813 303075530 303075024 0.000000e+00 760


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G034400 chr7B 33882727 33886539 3812 True 7042.000000 7042 100.00000 1 3813 1 chr7B.!!$R1 3812
1 TraesCS7B01G034400 chr7B 203603282 203603868 586 False 928.000000 928 95.23000 1 585 1 chr7B.!!$F1 584
2 TraesCS7B01G034400 chr7B 369908383 369908889 506 True 776.000000 776 94.28000 3307 3813 1 chr7B.!!$R2 506
3 TraesCS7B01G034400 chr7A 85600375 85602533 2158 True 663.750000 1090 89.63925 755 3089 4 chr7A.!!$R1 2334
4 TraesCS7B01G034400 chr7D 84235023 84237263 2240 True 883.333333 1088 88.83600 755 3026 3 chr7D.!!$R1 2271
5 TraesCS7B01G034400 chr7D 610615189 610615806 617 False 276.000000 339 86.07250 2228 2798 2 chr7D.!!$F1 570
6 TraesCS7B01G034400 chr2B 76511041 76511630 589 False 957.000000 957 95.93900 1 590 1 chr2B.!!$F1 589
7 TraesCS7B01G034400 chr2B 161811921 161812509 588 False 937.000000 937 95.41600 1 588 1 chr2B.!!$F2 587
8 TraesCS7B01G034400 chr2B 370690839 370691345 506 True 881.000000 881 98.02800 3307 3813 1 chr2B.!!$R2 506
9 TraesCS7B01G034400 chr2B 198791507 198792013 506 True 782.000000 782 94.47700 3307 3813 1 chr2B.!!$R1 506
10 TraesCS7B01G034400 chr2B 489059456 489059961 505 True 758.000000 758 93.67600 3308 3813 1 chr2B.!!$R3 505
11 TraesCS7B01G034400 chr2B 463188256 463188762 506 False 754.000000 754 93.49100 3307 3813 1 chr2B.!!$F3 506
12 TraesCS7B01G034400 chr6B 635287360 635287949 589 False 950.000000 950 95.76300 1 589 1 chr6B.!!$F1 588
13 TraesCS7B01G034400 chr6B 174951353 174951945 592 True 915.000000 915 94.60400 1 589 1 chr6B.!!$R1 588
14 TraesCS7B01G034400 chr5B 516272696 516273270 574 True 922.000000 922 95.66000 16 588 1 chr5B.!!$R4 572
15 TraesCS7B01G034400 chr5B 396071894 396072498 604 True 920.000000 920 94.22400 1 602 1 chr5B.!!$R2 601
16 TraesCS7B01G034400 chr5B 367619035 367619540 505 True 763.000000 763 93.88600 3307 3813 1 chr5B.!!$R1 506
17 TraesCS7B01G034400 chr5B 430489449 430489954 505 True 752.000000 752 93.47800 3308 3813 1 chr5B.!!$R3 505
18 TraesCS7B01G034400 chr1B 670669357 670669932 575 False 920.000000 920 95.49400 16 591 1 chr1B.!!$F1 575
19 TraesCS7B01G034400 chr3B 478633116 478633702 586 True 918.000000 918 94.90700 1 588 1 chr3B.!!$R1 587
20 TraesCS7B01G034400 chr3B 613522489 613522995 506 False 749.000000 749 93.30700 3307 3813 1 chr3B.!!$F1 506
21 TraesCS7B01G034400 chr4B 303075024 303075530 506 True 760.000000 760 93.68800 3307 3813 1 chr4B.!!$R1 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
594 600 0.107214 TGTGATTTCTGCCCGGGATC 60.107 55.0 29.31 18.63 0.00 3.36 F
1572 1603 0.251354 TGCAGCCAGAGATTCCTCAC 59.749 55.0 0.00 0.00 41.87 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2165 2218 0.102300 GTTTGCTGCGGACACCTTTT 59.898 50.0 0.0 0.0 0.0 2.27 R
3305 3523 0.037303 ACCTCACGTCCCTTCGAGTA 59.963 55.0 0.0 0.0 34.7 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 102 6.041423 ACAAATCAAGGGTTCATCAAATCC 57.959 37.500 0.00 0.00 38.57 3.01
191 193 2.040278 GGATGGATTGGGGATCGAATCA 59.960 50.000 10.97 0.00 39.07 2.57
203 205 4.319766 GGGATCGAATCAACGGATCAAATG 60.320 45.833 0.00 0.00 31.88 2.32
229 232 2.706071 GGAGAGGGATGAGGGGGT 59.294 66.667 0.00 0.00 0.00 4.95
268 274 1.588597 CGCTGCTCTCTGTCCAGAA 59.411 57.895 0.00 0.00 36.94 3.02
323 329 2.890474 CGGCCGCGCTTAAGTCAT 60.890 61.111 14.67 0.00 0.00 3.06
340 346 1.026182 CATTGTGCAGCGCCTAAGGA 61.026 55.000 2.29 0.00 0.00 3.36
459 465 0.249398 GTGACGCCTAAGTGATGGGT 59.751 55.000 0.00 0.00 30.80 4.51
481 487 4.373116 CACAGTAGGGTGCGGCGT 62.373 66.667 9.37 0.00 31.10 5.68
522 528 2.880890 CCAAAGGGTCAACAGAGTGAAG 59.119 50.000 0.00 0.00 0.00 3.02
594 600 0.107214 TGTGATTTCTGCCCGGGATC 60.107 55.000 29.31 18.63 0.00 3.36
598 604 2.631012 ATTTCTGCCCGGGATCAGCC 62.631 60.000 29.31 5.43 0.00 4.85
604 610 3.314331 CCGGGATCAGCCGGCTAT 61.314 66.667 32.30 22.19 42.67 2.97
605 611 2.047844 CGGGATCAGCCGGCTATG 60.048 66.667 32.30 19.95 37.63 2.23
606 612 2.359230 GGGATCAGCCGGCTATGC 60.359 66.667 32.30 25.07 37.63 3.14
607 613 2.359230 GGATCAGCCGGCTATGCC 60.359 66.667 32.30 25.21 46.75 4.40
620 626 4.820284 GGCTATGCCTATCTTGTTTCAC 57.180 45.455 0.73 0.00 46.69 3.18
621 627 3.565902 GGCTATGCCTATCTTGTTTCACC 59.434 47.826 0.73 0.00 46.69 4.02
622 628 3.565902 GCTATGCCTATCTTGTTTCACCC 59.434 47.826 0.00 0.00 0.00 4.61
623 629 2.507407 TGCCTATCTTGTTTCACCCC 57.493 50.000 0.00 0.00 0.00 4.95
624 630 1.707989 TGCCTATCTTGTTTCACCCCA 59.292 47.619 0.00 0.00 0.00 4.96
625 631 2.311542 TGCCTATCTTGTTTCACCCCAT 59.688 45.455 0.00 0.00 0.00 4.00
626 632 2.952310 GCCTATCTTGTTTCACCCCATC 59.048 50.000 0.00 0.00 0.00 3.51
627 633 3.555966 CCTATCTTGTTTCACCCCATCC 58.444 50.000 0.00 0.00 0.00 3.51
628 634 3.203040 CCTATCTTGTTTCACCCCATCCT 59.797 47.826 0.00 0.00 0.00 3.24
629 635 2.584835 TCTTGTTTCACCCCATCCTG 57.415 50.000 0.00 0.00 0.00 3.86
630 636 1.780309 TCTTGTTTCACCCCATCCTGT 59.220 47.619 0.00 0.00 0.00 4.00
631 637 2.162681 CTTGTTTCACCCCATCCTGTC 58.837 52.381 0.00 0.00 0.00 3.51
632 638 0.404040 TGTTTCACCCCATCCTGTCC 59.596 55.000 0.00 0.00 0.00 4.02
633 639 0.323451 GTTTCACCCCATCCTGTCCC 60.323 60.000 0.00 0.00 0.00 4.46
634 640 1.847798 TTTCACCCCATCCTGTCCCG 61.848 60.000 0.00 0.00 0.00 5.14
635 641 3.009115 CACCCCATCCTGTCCCGT 61.009 66.667 0.00 0.00 0.00 5.28
636 642 2.687566 ACCCCATCCTGTCCCGTC 60.688 66.667 0.00 0.00 0.00 4.79
637 643 2.687200 CCCCATCCTGTCCCGTCA 60.687 66.667 0.00 0.00 0.00 4.35
638 644 2.297895 CCCCATCCTGTCCCGTCAA 61.298 63.158 0.00 0.00 0.00 3.18
639 645 1.078426 CCCATCCTGTCCCGTCAAC 60.078 63.158 0.00 0.00 0.00 3.18
640 646 1.078426 CCATCCTGTCCCGTCAACC 60.078 63.158 0.00 0.00 0.00 3.77
641 647 1.447838 CATCCTGTCCCGTCAACCG 60.448 63.158 0.00 0.00 0.00 4.44
642 648 1.608336 ATCCTGTCCCGTCAACCGA 60.608 57.895 0.00 0.00 39.56 4.69
643 649 1.189524 ATCCTGTCCCGTCAACCGAA 61.190 55.000 0.00 0.00 39.56 4.30
644 650 1.070105 CCTGTCCCGTCAACCGAAA 59.930 57.895 0.00 0.00 39.56 3.46
645 651 0.533308 CCTGTCCCGTCAACCGAAAA 60.533 55.000 0.00 0.00 39.56 2.29
646 652 0.865769 CTGTCCCGTCAACCGAAAAG 59.134 55.000 0.00 0.00 39.56 2.27
660 666 3.691498 CCGAAAAGGTGAACAAGTTGAC 58.309 45.455 10.54 3.98 34.51 3.18
661 667 3.377172 CCGAAAAGGTGAACAAGTTGACT 59.623 43.478 10.54 0.00 34.51 3.41
662 668 4.142469 CCGAAAAGGTGAACAAGTTGACTT 60.142 41.667 10.54 3.21 33.80 3.01
663 669 5.399013 CGAAAAGGTGAACAAGTTGACTTT 58.601 37.500 10.54 8.69 33.11 2.66
664 670 5.861787 CGAAAAGGTGAACAAGTTGACTTTT 59.138 36.000 10.54 15.43 37.52 2.27
665 671 6.033513 CGAAAAGGTGAACAAGTTGACTTTTC 59.966 38.462 24.13 24.13 35.65 2.29
666 672 5.975693 AAGGTGAACAAGTTGACTTTTCA 57.024 34.783 10.54 6.21 34.18 2.69
667 673 5.567138 AGGTGAACAAGTTGACTTTTCAG 57.433 39.130 10.54 1.57 35.64 3.02
668 674 5.010282 AGGTGAACAAGTTGACTTTTCAGT 58.990 37.500 10.54 0.00 35.64 3.41
669 675 5.095490 GGTGAACAAGTTGACTTTTCAGTG 58.905 41.667 10.54 0.00 35.64 3.66
670 676 5.335661 GGTGAACAAGTTGACTTTTCAGTGT 60.336 40.000 10.54 1.72 35.64 3.55
671 677 5.569059 GTGAACAAGTTGACTTTTCAGTGTG 59.431 40.000 10.54 0.15 35.64 3.82
672 678 5.240623 TGAACAAGTTGACTTTTCAGTGTGT 59.759 36.000 10.54 0.00 32.98 3.72
673 679 5.296813 ACAAGTTGACTTTTCAGTGTGTC 57.703 39.130 10.54 0.00 33.11 3.67
674 680 5.003804 ACAAGTTGACTTTTCAGTGTGTCT 58.996 37.500 10.54 0.00 33.11 3.41
675 681 5.473504 ACAAGTTGACTTTTCAGTGTGTCTT 59.526 36.000 10.54 0.00 33.11 3.01
676 682 6.016276 ACAAGTTGACTTTTCAGTGTGTCTTT 60.016 34.615 10.54 0.00 33.11 2.52
677 683 6.183309 AGTTGACTTTTCAGTGTGTCTTTC 57.817 37.500 0.00 0.00 31.22 2.62
678 684 5.940470 AGTTGACTTTTCAGTGTGTCTTTCT 59.060 36.000 0.00 0.00 31.22 2.52
679 685 5.801350 TGACTTTTCAGTGTGTCTTTCTG 57.199 39.130 0.00 0.00 31.22 3.02
680 686 5.487433 TGACTTTTCAGTGTGTCTTTCTGA 58.513 37.500 0.00 0.00 36.59 3.27
681 687 6.115446 TGACTTTTCAGTGTGTCTTTCTGAT 58.885 36.000 0.00 0.00 37.91 2.90
682 688 6.258727 TGACTTTTCAGTGTGTCTTTCTGATC 59.741 38.462 0.00 0.00 37.91 2.92
683 689 6.115446 ACTTTTCAGTGTGTCTTTCTGATCA 58.885 36.000 0.00 0.00 37.91 2.92
684 690 5.991328 TTTCAGTGTGTCTTTCTGATCAC 57.009 39.130 0.00 0.00 37.91 3.06
685 691 4.670896 TCAGTGTGTCTTTCTGATCACA 57.329 40.909 0.00 0.00 36.02 3.58
686 692 4.371786 TCAGTGTGTCTTTCTGATCACAC 58.628 43.478 16.19 16.19 46.11 3.82
688 694 4.981389 GTGTGTCTTTCTGATCACACTC 57.019 45.455 16.52 6.01 44.52 3.51
689 695 3.743396 GTGTGTCTTTCTGATCACACTCC 59.257 47.826 16.52 1.72 44.52 3.85
690 696 3.643320 TGTGTCTTTCTGATCACACTCCT 59.357 43.478 11.71 0.00 39.94 3.69
691 697 3.993081 GTGTCTTTCTGATCACACTCCTG 59.007 47.826 0.00 0.00 36.91 3.86
692 698 3.007290 TGTCTTTCTGATCACACTCCTGG 59.993 47.826 0.00 0.00 0.00 4.45
693 699 2.027745 TCTTTCTGATCACACTCCTGGC 60.028 50.000 0.00 0.00 0.00 4.85
694 700 0.615331 TTCTGATCACACTCCTGGCC 59.385 55.000 0.00 0.00 0.00 5.36
695 701 1.222936 CTGATCACACTCCTGGCCC 59.777 63.158 0.00 0.00 0.00 5.80
696 702 2.187946 GATCACACTCCTGGCCCG 59.812 66.667 0.00 0.00 0.00 6.13
697 703 3.391665 GATCACACTCCTGGCCCGG 62.392 68.421 6.92 6.92 0.00 5.73
698 704 4.954118 TCACACTCCTGGCCCGGT 62.954 66.667 13.58 0.00 0.00 5.28
699 705 2.815684 ATCACACTCCTGGCCCGGTA 62.816 60.000 13.58 0.00 0.00 4.02
700 706 3.001406 ACACTCCTGGCCCGGTAC 61.001 66.667 13.58 0.00 0.00 3.34
701 707 3.000819 CACTCCTGGCCCGGTACA 61.001 66.667 13.58 0.00 0.00 2.90
702 708 2.203877 ACTCCTGGCCCGGTACAA 60.204 61.111 13.58 0.00 0.00 2.41
703 709 2.267961 CTCCTGGCCCGGTACAAC 59.732 66.667 13.58 0.00 0.00 3.32
704 710 2.527123 TCCTGGCCCGGTACAACA 60.527 61.111 13.58 0.00 0.00 3.33
705 711 2.119484 CTCCTGGCCCGGTACAACAA 62.119 60.000 13.58 0.00 0.00 2.83
706 712 1.228306 CCTGGCCCGGTACAACAAA 60.228 57.895 4.74 0.00 0.00 2.83
707 713 0.824182 CCTGGCCCGGTACAACAAAA 60.824 55.000 4.74 0.00 0.00 2.44
708 714 1.033574 CTGGCCCGGTACAACAAAAA 58.966 50.000 0.00 0.00 0.00 1.94
709 715 0.745468 TGGCCCGGTACAACAAAAAC 59.255 50.000 0.00 0.00 0.00 2.43
710 716 1.034356 GGCCCGGTACAACAAAAACT 58.966 50.000 0.00 0.00 0.00 2.66
711 717 2.228925 GGCCCGGTACAACAAAAACTA 58.771 47.619 0.00 0.00 0.00 2.24
712 718 2.030893 GGCCCGGTACAACAAAAACTAC 60.031 50.000 0.00 0.00 0.00 2.73
713 719 2.030893 GCCCGGTACAACAAAAACTACC 60.031 50.000 0.00 0.00 0.00 3.18
717 723 4.472691 GGTACAACAAAAACTACCGACC 57.527 45.455 0.00 0.00 0.00 4.79
718 724 3.876320 GGTACAACAAAAACTACCGACCA 59.124 43.478 0.00 0.00 0.00 4.02
719 725 4.516321 GGTACAACAAAAACTACCGACCAT 59.484 41.667 0.00 0.00 0.00 3.55
720 726 5.008911 GGTACAACAAAAACTACCGACCATT 59.991 40.000 0.00 0.00 0.00 3.16
721 727 5.177725 ACAACAAAAACTACCGACCATTC 57.822 39.130 0.00 0.00 0.00 2.67
722 728 4.215965 CAACAAAAACTACCGACCATTCG 58.784 43.478 0.00 0.00 45.44 3.34
731 737 3.640000 GACCATTCGGCGCGGATG 61.640 66.667 18.95 14.93 41.97 3.51
734 740 3.940640 CATTCGGCGCGGATGGTG 61.941 66.667 18.95 13.49 38.99 4.17
735 741 4.155733 ATTCGGCGCGGATGGTGA 62.156 61.111 18.95 3.49 0.00 4.02
736 742 4.812476 TTCGGCGCGGATGGTGAG 62.812 66.667 18.95 0.00 0.00 3.51
741 747 2.887568 CGCGGATGGTGAGCTGTC 60.888 66.667 0.00 0.00 0.00 3.51
742 748 2.581354 GCGGATGGTGAGCTGTCT 59.419 61.111 0.00 0.00 0.00 3.41
743 749 1.520342 GCGGATGGTGAGCTGTCTC 60.520 63.158 0.00 0.00 39.78 3.36
744 750 1.893062 CGGATGGTGAGCTGTCTCA 59.107 57.895 0.00 0.00 46.43 3.27
757 763 6.035843 TGAGCTGTCTCAAAAACAATGAAAC 58.964 36.000 0.00 0.00 45.69 2.78
761 767 7.550196 AGCTGTCTCAAAAACAATGAAACAAAT 59.450 29.630 0.00 0.00 28.11 2.32
776 782 4.996062 AACAAATACTACCGTTTCACCG 57.004 40.909 0.00 0.00 0.00 4.94
795 804 3.689649 ACCGTCAGAAATGAAATAGGCAC 59.310 43.478 0.00 0.00 0.00 5.01
847 859 3.748568 GGGAGATATTTCGTCCATGCTTC 59.251 47.826 0.00 0.00 31.31 3.86
848 860 4.380531 GGAGATATTTCGTCCATGCTTCA 58.619 43.478 0.00 0.00 0.00 3.02
849 861 4.212214 GGAGATATTTCGTCCATGCTTCAC 59.788 45.833 0.00 0.00 0.00 3.18
891 903 2.415426 GCGCTCTGCCTCTCCTAC 59.585 66.667 0.00 0.00 37.76 3.18
892 904 2.718731 CGCTCTGCCTCTCCTACG 59.281 66.667 0.00 0.00 0.00 3.51
893 905 2.415426 GCTCTGCCTCTCCTACGC 59.585 66.667 0.00 0.00 0.00 4.42
894 906 2.124693 GCTCTGCCTCTCCTACGCT 61.125 63.158 0.00 0.00 0.00 5.07
895 907 2.029743 CTCTGCCTCTCCTACGCTC 58.970 63.158 0.00 0.00 0.00 5.03
896 908 1.452145 CTCTGCCTCTCCTACGCTCC 61.452 65.000 0.00 0.00 0.00 4.70
897 909 1.754621 CTGCCTCTCCTACGCTCCA 60.755 63.158 0.00 0.00 0.00 3.86
898 910 1.733402 CTGCCTCTCCTACGCTCCAG 61.733 65.000 0.00 0.00 0.00 3.86
934 946 2.224523 CCTCCCAAGCTACAAGACAACA 60.225 50.000 0.00 0.00 0.00 3.33
1185 1201 4.636435 AACAACAGGTCCGGCGGG 62.636 66.667 27.98 12.61 0.00 6.13
1206 1222 4.388499 GGCGCGACCAAGGAGGAA 62.388 66.667 12.10 0.00 41.22 3.36
1254 1270 2.125512 GAGGCCGTGCTGATCGTT 60.126 61.111 0.00 0.00 0.00 3.85
1269 1288 2.572284 GTTGACGACGGGGAGGAG 59.428 66.667 0.00 0.00 0.00 3.69
1341 1360 5.894393 TCTTGATCTCTCCTACAGGTAAAGG 59.106 44.000 0.00 0.00 36.34 3.11
1367 1389 7.148239 GCACACTCTTTACTAATTACCATGCTT 60.148 37.037 0.00 0.00 0.00 3.91
1390 1414 7.591006 TTACGACCAAGTAAATTTCAGCTAG 57.409 36.000 0.00 0.00 34.08 3.42
1407 1431 5.068591 TCAGCTAGAAATGGTGATTAGCGTA 59.931 40.000 0.00 0.00 41.12 4.42
1431 1459 3.422052 AACCGAGGTTGTAGCGTAGCC 62.422 57.143 6.73 0.00 46.93 3.93
1572 1603 0.251354 TGCAGCCAGAGATTCCTCAC 59.749 55.000 0.00 0.00 41.87 3.51
1575 1606 1.489649 CAGCCAGAGATTCCTCACCAT 59.510 52.381 0.00 0.00 41.87 3.55
1581 1612 4.141551 CCAGAGATTCCTCACCATCATCAA 60.142 45.833 0.00 0.00 41.87 2.57
1595 1632 4.463539 CCATCATCAATCCCAAGTCAACAA 59.536 41.667 0.00 0.00 0.00 2.83
1598 1635 4.520111 TCATCAATCCCAAGTCAACAACTG 59.480 41.667 0.00 0.00 38.58 3.16
1617 1654 6.488006 ACAACTGAACTGCTGATCAAACTTAT 59.512 34.615 5.13 0.00 0.00 1.73
1621 1658 8.671921 ACTGAACTGCTGATCAAACTTATATTG 58.328 33.333 5.13 0.00 0.00 1.90
1624 1661 7.325660 ACTGCTGATCAAACTTATATTGTGG 57.674 36.000 0.00 0.00 0.00 4.17
1625 1662 7.112122 ACTGCTGATCAAACTTATATTGTGGA 58.888 34.615 0.00 0.00 0.00 4.02
1626 1663 7.611467 ACTGCTGATCAAACTTATATTGTGGAA 59.389 33.333 0.00 0.00 0.00 3.53
1627 1664 7.761409 TGCTGATCAAACTTATATTGTGGAAC 58.239 34.615 0.00 0.00 37.35 3.62
1639 1676 1.953559 TGTGGAACAGACTGCTGAAC 58.046 50.000 1.25 0.00 45.67 3.18
1640 1677 1.486310 TGTGGAACAGACTGCTGAACT 59.514 47.619 1.25 0.00 45.67 3.01
1641 1678 1.869767 GTGGAACAGACTGCTGAACTG 59.130 52.381 1.25 15.81 45.17 3.16
1642 1679 0.871057 GGAACAGACTGCTGAACTGC 59.129 55.000 16.73 0.00 45.17 4.40
1643 1680 1.542108 GGAACAGACTGCTGAACTGCT 60.542 52.381 16.73 9.13 45.17 4.24
1644 1681 1.530293 GAACAGACTGCTGAACTGCTG 59.470 52.381 16.73 8.43 45.17 4.41
1645 1682 0.755079 ACAGACTGCTGAACTGCTGA 59.245 50.000 16.73 0.00 45.17 4.26
1646 1683 1.347050 ACAGACTGCTGAACTGCTGAT 59.653 47.619 16.73 0.00 45.17 2.90
1647 1684 2.001159 CAGACTGCTGAACTGCTGATC 58.999 52.381 14.69 0.00 45.17 2.92
1648 1685 1.622312 AGACTGCTGAACTGCTGATCA 59.378 47.619 14.69 3.61 36.10 2.92
1649 1686 2.038164 AGACTGCTGAACTGCTGATCAA 59.962 45.455 14.69 0.00 36.10 2.57
1650 1687 2.810274 GACTGCTGAACTGCTGATCAAA 59.190 45.455 14.69 0.00 36.10 2.69
1651 1688 3.418995 ACTGCTGAACTGCTGATCAAAT 58.581 40.909 14.69 0.00 36.10 2.32
1652 1689 3.825014 ACTGCTGAACTGCTGATCAAATT 59.175 39.130 14.69 0.00 36.10 1.82
1653 1690 4.280174 ACTGCTGAACTGCTGATCAAATTT 59.720 37.500 14.69 0.00 36.10 1.82
1654 1691 5.474532 ACTGCTGAACTGCTGATCAAATTTA 59.525 36.000 14.69 0.00 36.10 1.40
1655 1692 6.016024 ACTGCTGAACTGCTGATCAAATTTAA 60.016 34.615 14.69 0.00 36.10 1.52
1656 1693 6.747125 TGCTGAACTGCTGATCAAATTTAAA 58.253 32.000 5.13 0.00 0.00 1.52
1657 1694 7.380536 TGCTGAACTGCTGATCAAATTTAAAT 58.619 30.769 5.13 0.00 0.00 1.40
1658 1695 8.522003 TGCTGAACTGCTGATCAAATTTAAATA 58.478 29.630 0.01 0.00 0.00 1.40
1659 1696 8.801913 GCTGAACTGCTGATCAAATTTAAATAC 58.198 33.333 0.01 0.00 0.00 1.89
1660 1697 9.844790 CTGAACTGCTGATCAAATTTAAATACA 57.155 29.630 0.01 0.00 0.00 2.29
1734 1771 4.482952 TCTGGAGTACTACGATCAGACA 57.517 45.455 0.00 0.00 0.00 3.41
1740 1777 5.347620 AGTACTACGATCAGACAGTCTCT 57.652 43.478 0.00 0.00 0.00 3.10
1758 1795 0.846870 CTTCTCCCAGGGGGTCCTTT 60.847 60.000 4.81 0.00 44.74 3.11
1761 1798 1.083912 TCTCCCAGGGGGTCCTTTTAT 59.916 52.381 4.81 0.00 44.74 1.40
1764 1801 3.727391 CTCCCAGGGGGTCCTTTTATATT 59.273 47.826 5.33 0.00 44.74 1.28
1770 1807 3.117284 GGGGGTCCTTTTATATTCCTGCA 60.117 47.826 0.00 0.00 0.00 4.41
1834 1874 2.663852 ACCCTGTTTTCCGACGCG 60.664 61.111 3.53 3.53 0.00 6.01
1835 1875 4.084888 CCCTGTTTTCCGACGCGC 62.085 66.667 5.73 0.00 0.00 6.86
1847 1898 3.711997 GACGCGCGAAATTTCCCCG 62.712 63.158 39.36 15.15 0.00 5.73
1856 1907 2.031870 GAAATTTCCCCGGATTCCTGG 58.968 52.381 0.73 6.19 38.61 4.45
1873 1924 1.066002 CTGGTGGAACTGCACTGTTTG 59.934 52.381 1.23 0.00 36.74 2.93
1874 1925 1.102978 GGTGGAACTGCACTGTTTGT 58.897 50.000 1.23 0.00 36.74 2.83
1875 1926 1.476488 GGTGGAACTGCACTGTTTGTT 59.524 47.619 1.23 0.00 36.74 2.83
1876 1927 2.094234 GGTGGAACTGCACTGTTTGTTT 60.094 45.455 1.23 0.00 36.74 2.83
1877 1928 2.923020 GTGGAACTGCACTGTTTGTTTG 59.077 45.455 0.00 0.00 0.00 2.93
1878 1929 1.926510 GGAACTGCACTGTTTGTTTGC 59.073 47.619 0.00 0.00 36.76 3.68
1879 1930 2.417243 GGAACTGCACTGTTTGTTTGCT 60.417 45.455 0.00 0.00 37.16 3.91
1880 1931 2.282701 ACTGCACTGTTTGTTTGCTG 57.717 45.000 0.00 0.00 40.09 4.41
1881 1932 1.135024 ACTGCACTGTTTGTTTGCTGG 60.135 47.619 0.00 0.00 38.95 4.85
1884 1935 1.135141 GCACTGTTTGTTTGCTGGTGA 60.135 47.619 0.00 0.00 33.26 4.02
1885 1936 2.529151 CACTGTTTGTTTGCTGGTGAC 58.471 47.619 0.00 0.00 0.00 3.67
1888 1939 2.423185 CTGTTTGTTTGCTGGTGACTCA 59.577 45.455 0.00 0.00 0.00 3.41
1890 1941 3.181488 TGTTTGTTTGCTGGTGACTCATG 60.181 43.478 0.00 0.00 0.00 3.07
1891 1942 0.953727 TGTTTGCTGGTGACTCATGC 59.046 50.000 0.00 0.00 0.00 4.06
1892 1943 0.953727 GTTTGCTGGTGACTCATGCA 59.046 50.000 0.00 0.00 0.00 3.96
1893 1944 1.337703 GTTTGCTGGTGACTCATGCAA 59.662 47.619 10.86 10.86 41.10 4.08
1894 1945 1.241165 TTGCTGGTGACTCATGCAAG 58.759 50.000 10.86 0.00 38.49 4.01
1896 1947 1.242076 GCTGGTGACTCATGCAAGTT 58.758 50.000 0.00 0.00 0.00 2.66
1897 1948 1.610522 GCTGGTGACTCATGCAAGTTT 59.389 47.619 0.00 0.00 0.00 2.66
1898 1949 2.351157 GCTGGTGACTCATGCAAGTTTC 60.351 50.000 0.00 0.00 0.00 2.78
1899 1950 2.227388 CTGGTGACTCATGCAAGTTTCC 59.773 50.000 0.00 0.00 0.00 3.13
1900 1951 2.158623 TGGTGACTCATGCAAGTTTCCT 60.159 45.455 0.00 0.00 0.00 3.36
1901 1952 2.227388 GGTGACTCATGCAAGTTTCCTG 59.773 50.000 0.00 0.00 0.00 3.86
1902 1953 2.880890 GTGACTCATGCAAGTTTCCTGT 59.119 45.455 0.00 0.00 0.00 4.00
1903 1954 2.880268 TGACTCATGCAAGTTTCCTGTG 59.120 45.455 0.00 0.00 0.00 3.66
1904 1955 3.141398 GACTCATGCAAGTTTCCTGTGA 58.859 45.455 0.00 0.00 0.00 3.58
1905 1956 3.144506 ACTCATGCAAGTTTCCTGTGAG 58.855 45.455 6.62 6.62 38.01 3.51
1906 1957 3.181451 ACTCATGCAAGTTTCCTGTGAGA 60.181 43.478 13.54 0.00 36.15 3.27
1922 1973 2.497675 GTGAGATCAGGTTCCACAGCTA 59.502 50.000 0.00 0.00 0.00 3.32
1928 1979 0.322975 AGGTTCCACAGCTACTGCAG 59.677 55.000 13.48 13.48 42.74 4.41
1967 2018 1.672356 CAAGCACTGCCTTAGCCGT 60.672 57.895 0.00 0.00 36.83 5.68
2054 2107 4.504858 AGTAGTAGCATTGTACTGTTGCC 58.495 43.478 10.34 0.00 37.07 4.52
2055 2108 2.711542 AGTAGCATTGTACTGTTGCCC 58.288 47.619 10.34 4.09 37.07 5.36
2081 2134 7.170393 AGCCAAAACTTCCTTTCATATAACC 57.830 36.000 0.00 0.00 0.00 2.85
2089 2142 8.970859 ACTTCCTTTCATATAACCAGATCTTG 57.029 34.615 0.00 0.00 0.00 3.02
2161 2214 8.703604 ACATGACTGACAATGTAACACTATAC 57.296 34.615 0.00 0.00 0.00 1.47
2164 2217 8.702163 TGACTGACAATGTAACACTATACATG 57.298 34.615 1.08 0.00 43.83 3.21
2165 2218 8.527810 TGACTGACAATGTAACACTATACATGA 58.472 33.333 0.00 0.00 43.83 3.07
2177 2275 4.034048 CACTATACATGAAAAGGTGTCCGC 59.966 45.833 0.00 0.00 0.00 5.54
2193 2291 2.413453 GTCCGCAGCAAACAAAACAAAA 59.587 40.909 0.00 0.00 0.00 2.44
2200 2298 5.163774 GCAGCAAACAAAACAAAATCCAGAA 60.164 36.000 0.00 0.00 0.00 3.02
2306 2404 3.768406 CTCTTCTGAAGATGACCTCACG 58.232 50.000 19.61 2.30 36.82 4.35
2369 2467 6.340522 GGAATGGGAAAACTTGGTATGAATG 58.659 40.000 0.00 0.00 0.00 2.67
2384 2519 7.217200 TGGTATGAATGCTCACTATTTCTACC 58.783 38.462 0.00 0.00 33.30 3.18
2423 2559 3.277142 AACCAAGAAGAACAGTCGGTT 57.723 42.857 0.00 0.00 44.10 4.44
2432 2568 1.329599 GAACAGTCGGTTGCGAAAACT 59.670 47.619 0.00 0.00 40.63 2.66
2440 2576 4.445385 GTCGGTTGCGAAAACTAAGACTTA 59.555 41.667 0.00 0.00 0.00 2.24
2447 2583 5.694910 TGCGAAAACTAAGACTTAACTGAGG 59.305 40.000 0.00 0.00 0.00 3.86
2449 2585 6.128876 GCGAAAACTAAGACTTAACTGAGGTC 60.129 42.308 0.00 0.00 0.00 3.85
2450 2586 6.365518 CGAAAACTAAGACTTAACTGAGGTCC 59.634 42.308 0.00 0.00 0.00 4.46
2464 2605 6.099159 ACTGAGGTCCTCTTACAAAGTTAC 57.901 41.667 19.82 0.00 0.00 2.50
2579 2720 2.040278 CAAGATCCCCAAGGTCTGTGAA 59.960 50.000 0.00 0.00 0.00 3.18
2617 2758 7.441836 TCTTGAATCTTGACTAGTACTGCAAA 58.558 34.615 5.39 0.00 0.00 3.68
2686 2895 2.751259 GAGTGATCCTTGCTGAATTGCA 59.249 45.455 0.00 0.00 41.65 4.08
2689 2898 1.820519 GATCCTTGCTGAATTGCACCA 59.179 47.619 0.00 0.00 43.20 4.17
2813 3022 3.164479 CCGGGCCATCTCCATGAT 58.836 61.111 4.39 0.00 35.40 2.45
2814 3023 1.002868 CCGGGCCATCTCCATGATC 60.003 63.158 4.39 0.00 32.05 2.92
2815 3024 1.756665 CGGGCCATCTCCATGATCA 59.243 57.895 4.39 0.00 32.05 2.92
2816 3025 0.109153 CGGGCCATCTCCATGATCAA 59.891 55.000 4.39 0.00 32.05 2.57
2817 3026 1.881072 CGGGCCATCTCCATGATCAAG 60.881 57.143 4.39 0.00 32.05 3.02
2818 3027 1.422781 GGGCCATCTCCATGATCAAGA 59.577 52.381 4.39 0.00 32.05 3.02
2819 3028 2.041350 GGGCCATCTCCATGATCAAGAT 59.959 50.000 4.39 0.42 32.05 2.40
2833 3042 3.190383 TCAAGATCAAGGGAGGACTCA 57.810 47.619 1.32 0.00 0.00 3.41
2868 3077 2.437281 CCAGTAGCCATCACTCCATCTT 59.563 50.000 0.00 0.00 0.00 2.40
2917 3133 3.349927 TCTCCAGCCAAAGATTCATGTG 58.650 45.455 0.00 0.00 0.00 3.21
2932 3148 2.158769 TCATGTGTATCCATCACCAGCC 60.159 50.000 0.00 0.00 35.25 4.85
2942 3158 0.107017 ATCACCAGCCCTGTACATGC 60.107 55.000 8.98 8.98 0.00 4.06
2995 3212 4.923281 TCTGTACATGTCACTGATTTGTCG 59.077 41.667 0.00 0.00 0.00 4.35
3009 3226 9.755064 CACTGATTTGTCGGTAAGTAAATAAAG 57.245 33.333 0.00 0.00 0.00 1.85
3032 3250 4.380655 GCAAGATACCGACTTGAGTGTACT 60.381 45.833 11.08 0.00 44.92 2.73
3039 3257 2.143925 GACTTGAGTGTACTTGCCACC 58.856 52.381 0.00 0.00 33.20 4.61
3040 3258 1.202770 ACTTGAGTGTACTTGCCACCC 60.203 52.381 0.00 0.00 33.20 4.61
3068 3286 1.610624 GCGTGGACCTTGATTTCCTGA 60.611 52.381 0.00 0.00 32.55 3.86
3072 3290 2.040278 TGGACCTTGATTTCCTGACAGG 59.960 50.000 15.99 15.99 36.46 4.00
3089 3307 4.873827 TGACAGGAATAATTGGAACGCTAC 59.126 41.667 0.00 0.00 0.00 3.58
3090 3308 4.196971 ACAGGAATAATTGGAACGCTACC 58.803 43.478 0.00 0.00 0.00 3.18
3091 3309 4.080526 ACAGGAATAATTGGAACGCTACCT 60.081 41.667 0.00 0.00 0.00 3.08
3092 3310 5.129815 ACAGGAATAATTGGAACGCTACCTA 59.870 40.000 0.00 0.00 0.00 3.08
3093 3311 6.053005 CAGGAATAATTGGAACGCTACCTAA 58.947 40.000 0.00 0.00 0.00 2.69
3094 3312 6.202954 CAGGAATAATTGGAACGCTACCTAAG 59.797 42.308 0.00 0.00 0.00 2.18
3095 3313 6.099269 AGGAATAATTGGAACGCTACCTAAGA 59.901 38.462 0.00 0.00 0.00 2.10
3096 3314 6.424207 GGAATAATTGGAACGCTACCTAAGAG 59.576 42.308 0.00 0.00 0.00 2.85
3097 3315 4.820894 AATTGGAACGCTACCTAAGAGT 57.179 40.909 0.00 0.00 40.33 3.24
3098 3316 5.927281 AATTGGAACGCTACCTAAGAGTA 57.073 39.130 0.00 0.00 37.23 2.59
3099 3317 5.927281 ATTGGAACGCTACCTAAGAGTAA 57.073 39.130 0.00 0.00 37.23 2.24
3100 3318 4.978083 TGGAACGCTACCTAAGAGTAAG 57.022 45.455 0.00 0.00 37.23 2.34
3101 3319 4.338879 TGGAACGCTACCTAAGAGTAAGT 58.661 43.478 0.00 0.00 37.23 2.24
3102 3320 5.500234 TGGAACGCTACCTAAGAGTAAGTA 58.500 41.667 0.00 0.00 37.23 2.24
3103 3321 5.587844 TGGAACGCTACCTAAGAGTAAGTAG 59.412 44.000 0.00 0.00 37.23 2.57
3104 3322 5.588246 GGAACGCTACCTAAGAGTAAGTAGT 59.412 44.000 0.00 0.00 37.23 2.73
3105 3323 6.763610 GGAACGCTACCTAAGAGTAAGTAGTA 59.236 42.308 0.00 0.00 37.23 1.82
3106 3324 7.443879 GGAACGCTACCTAAGAGTAAGTAGTAT 59.556 40.741 0.00 0.00 37.23 2.12
3107 3325 8.744568 AACGCTACCTAAGAGTAAGTAGTATT 57.255 34.615 0.00 0.00 37.23 1.89
3108 3326 8.744568 ACGCTACCTAAGAGTAAGTAGTATTT 57.255 34.615 0.00 0.00 36.35 1.40
3109 3327 9.183368 ACGCTACCTAAGAGTAAGTAGTATTTT 57.817 33.333 0.00 0.00 36.35 1.82
3144 3362 8.821147 AAAACATAAACGTAGACATGTGTAGA 57.179 30.769 1.15 0.00 32.15 2.59
3145 3363 7.807687 AACATAAACGTAGACATGTGTAGAC 57.192 36.000 1.15 0.00 32.15 2.59
3146 3364 6.327934 ACATAAACGTAGACATGTGTAGACC 58.672 40.000 1.15 0.00 30.64 3.85
3147 3365 4.859304 AAACGTAGACATGTGTAGACCA 57.141 40.909 1.15 0.00 0.00 4.02
3148 3366 3.844577 ACGTAGACATGTGTAGACCAC 57.155 47.619 1.15 0.00 44.78 4.16
3157 3375 2.169832 GTGTAGACCACATGCACACT 57.830 50.000 0.00 0.00 43.92 3.55
3158 3376 2.069273 GTGTAGACCACATGCACACTC 58.931 52.381 0.00 0.00 43.92 3.51
3159 3377 1.691434 TGTAGACCACATGCACACTCA 59.309 47.619 0.00 0.00 30.04 3.41
3160 3378 2.302733 TGTAGACCACATGCACACTCAT 59.697 45.455 0.00 0.00 30.04 2.90
3161 3379 2.574006 AGACCACATGCACACTCATT 57.426 45.000 0.00 0.00 0.00 2.57
3162 3380 2.867624 AGACCACATGCACACTCATTT 58.132 42.857 0.00 0.00 0.00 2.32
3163 3381 2.816087 AGACCACATGCACACTCATTTC 59.184 45.455 0.00 0.00 0.00 2.17
3164 3382 1.888512 ACCACATGCACACTCATTTCC 59.111 47.619 0.00 0.00 0.00 3.13
3165 3383 1.887854 CCACATGCACACTCATTTCCA 59.112 47.619 0.00 0.00 0.00 3.53
3166 3384 2.494471 CCACATGCACACTCATTTCCAT 59.506 45.455 0.00 0.00 0.00 3.41
3167 3385 3.507786 CACATGCACACTCATTTCCATG 58.492 45.455 0.00 0.00 36.90 3.66
3168 3386 3.191791 CACATGCACACTCATTTCCATGA 59.808 43.478 0.00 0.00 37.05 3.07
3169 3387 3.827876 ACATGCACACTCATTTCCATGAA 59.172 39.130 0.00 0.00 39.04 2.57
3170 3388 3.921119 TGCACACTCATTTCCATGAAC 57.079 42.857 0.00 0.00 39.04 3.18
3171 3389 3.220940 TGCACACTCATTTCCATGAACA 58.779 40.909 0.00 0.00 39.04 3.18
3172 3390 3.827876 TGCACACTCATTTCCATGAACAT 59.172 39.130 0.00 0.00 39.04 2.71
3173 3391 5.008980 TGCACACTCATTTCCATGAACATA 58.991 37.500 0.00 0.00 39.04 2.29
3174 3392 5.106197 TGCACACTCATTTCCATGAACATAC 60.106 40.000 0.00 0.00 39.04 2.39
3175 3393 5.562917 CACACTCATTTCCATGAACATACG 58.437 41.667 0.00 0.00 39.04 3.06
3176 3394 4.094887 ACACTCATTTCCATGAACATACGC 59.905 41.667 0.00 0.00 39.04 4.42
3177 3395 4.094739 CACTCATTTCCATGAACATACGCA 59.905 41.667 0.00 0.00 39.04 5.24
3178 3396 4.094887 ACTCATTTCCATGAACATACGCAC 59.905 41.667 0.00 0.00 39.04 5.34
3179 3397 4.006319 TCATTTCCATGAACATACGCACA 58.994 39.130 0.00 0.00 36.41 4.57
3180 3398 4.639755 TCATTTCCATGAACATACGCACAT 59.360 37.500 0.00 0.00 36.41 3.21
3181 3399 5.819901 TCATTTCCATGAACATACGCACATA 59.180 36.000 0.00 0.00 36.41 2.29
3182 3400 6.486320 TCATTTCCATGAACATACGCACATAT 59.514 34.615 0.00 0.00 36.41 1.78
3183 3401 5.922739 TTCCATGAACATACGCACATATC 57.077 39.130 0.00 0.00 0.00 1.63
3184 3402 5.213891 TCCATGAACATACGCACATATCT 57.786 39.130 0.00 0.00 0.00 1.98
3185 3403 6.339587 TCCATGAACATACGCACATATCTA 57.660 37.500 0.00 0.00 0.00 1.98
3186 3404 6.935167 TCCATGAACATACGCACATATCTAT 58.065 36.000 0.00 0.00 0.00 1.98
3187 3405 7.386059 TCCATGAACATACGCACATATCTATT 58.614 34.615 0.00 0.00 0.00 1.73
3188 3406 7.331687 TCCATGAACATACGCACATATCTATTG 59.668 37.037 0.00 0.00 0.00 1.90
3189 3407 7.118245 CCATGAACATACGCACATATCTATTGT 59.882 37.037 0.00 0.00 0.00 2.71
3190 3408 8.498358 CATGAACATACGCACATATCTATTGTT 58.502 33.333 0.00 0.00 0.00 2.83
3191 3409 7.850501 TGAACATACGCACATATCTATTGTTG 58.149 34.615 0.00 0.00 0.00 3.33
3192 3410 7.708752 TGAACATACGCACATATCTATTGTTGA 59.291 33.333 0.00 0.00 0.00 3.18
3193 3411 8.607441 AACATACGCACATATCTATTGTTGAT 57.393 30.769 0.00 0.00 0.00 2.57
3194 3412 8.607441 ACATACGCACATATCTATTGTTGATT 57.393 30.769 0.00 0.00 0.00 2.57
3195 3413 9.056005 ACATACGCACATATCTATTGTTGATTT 57.944 29.630 0.00 0.00 0.00 2.17
3196 3414 9.882996 CATACGCACATATCTATTGTTGATTTT 57.117 29.630 0.00 0.00 0.00 1.82
3199 3417 9.882996 ACGCACATATCTATTGTTGATTTTATG 57.117 29.630 0.00 0.00 0.00 1.90
3200 3418 9.333497 CGCACATATCTATTGTTGATTTTATGG 57.667 33.333 0.00 0.00 0.00 2.74
3201 3419 9.132521 GCACATATCTATTGTTGATTTTATGGC 57.867 33.333 0.00 0.00 0.00 4.40
3202 3420 9.630098 CACATATCTATTGTTGATTTTATGGCC 57.370 33.333 0.00 0.00 0.00 5.36
3203 3421 8.806146 ACATATCTATTGTTGATTTTATGGCCC 58.194 33.333 0.00 0.00 0.00 5.80
3204 3422 9.028284 CATATCTATTGTTGATTTTATGGCCCT 57.972 33.333 0.00 0.00 0.00 5.19
3206 3424 8.641498 ATCTATTGTTGATTTTATGGCCCTAG 57.359 34.615 0.00 0.00 0.00 3.02
3207 3425 7.004086 TCTATTGTTGATTTTATGGCCCTAGG 58.996 38.462 0.06 0.06 0.00 3.02
3221 3439 4.386867 GCCCTAGGCCAACTTAAAATTC 57.613 45.455 5.01 0.00 44.06 2.17
3222 3440 4.023980 GCCCTAGGCCAACTTAAAATTCT 58.976 43.478 5.01 0.00 44.06 2.40
3223 3441 5.198207 GCCCTAGGCCAACTTAAAATTCTA 58.802 41.667 5.01 0.00 44.06 2.10
3224 3442 5.655090 GCCCTAGGCCAACTTAAAATTCTAA 59.345 40.000 5.01 0.00 44.06 2.10
3225 3443 6.153851 GCCCTAGGCCAACTTAAAATTCTAAA 59.846 38.462 5.01 0.00 44.06 1.85
3226 3444 7.310175 GCCCTAGGCCAACTTAAAATTCTAAAA 60.310 37.037 5.01 0.00 44.06 1.52
3227 3445 8.758829 CCCTAGGCCAACTTAAAATTCTAAAAT 58.241 33.333 5.01 0.00 0.00 1.82
3228 3446 9.803315 CCTAGGCCAACTTAAAATTCTAAAATC 57.197 33.333 5.01 0.00 0.00 2.17
3231 3449 9.088987 AGGCCAACTTAAAATTCTAAAATCTCA 57.911 29.630 5.01 0.00 0.00 3.27
3232 3450 9.705290 GGCCAACTTAAAATTCTAAAATCTCAA 57.295 29.630 0.00 0.00 0.00 3.02
3243 3461 9.933723 AATTCTAAAATCTCAAGAACCATTTGG 57.066 29.630 0.00 0.00 42.17 3.28
3244 3462 6.924111 TCTAAAATCTCAAGAACCATTTGGC 58.076 36.000 0.00 0.00 39.32 4.52
3245 3463 5.813513 AAAATCTCAAGAACCATTTGGCT 57.186 34.783 0.00 0.00 39.32 4.75
3246 3464 5.813513 AAATCTCAAGAACCATTTGGCTT 57.186 34.783 0.00 0.00 39.32 4.35
3247 3465 4.796038 ATCTCAAGAACCATTTGGCTTG 57.204 40.909 9.46 9.46 39.32 4.01
3248 3466 2.297033 TCTCAAGAACCATTTGGCTTGC 59.703 45.455 10.44 0.00 36.12 4.01
3249 3467 2.036217 CTCAAGAACCATTTGGCTTGCA 59.964 45.455 10.44 0.00 36.12 4.08
3250 3468 2.633967 TCAAGAACCATTTGGCTTGCAT 59.366 40.909 10.44 0.00 36.12 3.96
3251 3469 2.739913 CAAGAACCATTTGGCTTGCATG 59.260 45.455 0.00 0.00 39.32 4.06
3252 3470 1.276989 AGAACCATTTGGCTTGCATGG 59.723 47.619 8.35 8.35 42.92 3.66
3253 3471 0.321830 AACCATTTGGCTTGCATGGC 60.322 50.000 18.03 18.03 41.21 4.40
3254 3472 1.297039 CCATTTGGCTTGCATGGCA 59.703 52.632 22.72 22.72 40.80 4.92
3255 3473 0.321741 CCATTTGGCTTGCATGGCAA 60.322 50.000 30.01 30.01 46.80 4.52
3265 3483 3.294079 GCATGGCAAGTGCAAAAGT 57.706 47.368 8.15 0.00 44.36 2.66
3266 3484 1.585297 GCATGGCAAGTGCAAAAGTT 58.415 45.000 8.15 0.00 44.36 2.66
3267 3485 1.941975 GCATGGCAAGTGCAAAAGTTT 59.058 42.857 8.15 0.00 44.36 2.66
3268 3486 3.129871 GCATGGCAAGTGCAAAAGTTTA 58.870 40.909 8.15 0.00 44.36 2.01
3269 3487 3.184986 GCATGGCAAGTGCAAAAGTTTAG 59.815 43.478 8.15 0.00 44.36 1.85
3270 3488 4.370917 CATGGCAAGTGCAAAAGTTTAGT 58.629 39.130 5.52 0.00 44.36 2.24
3271 3489 5.527951 CATGGCAAGTGCAAAAGTTTAGTA 58.472 37.500 5.52 0.00 44.36 1.82
3272 3490 5.782893 TGGCAAGTGCAAAAGTTTAGTAT 57.217 34.783 5.52 0.00 44.36 2.12
3273 3491 5.768317 TGGCAAGTGCAAAAGTTTAGTATC 58.232 37.500 5.52 0.00 44.36 2.24
3274 3492 5.534654 TGGCAAGTGCAAAAGTTTAGTATCT 59.465 36.000 5.52 0.00 44.36 1.98
3275 3493 6.040391 TGGCAAGTGCAAAAGTTTAGTATCTT 59.960 34.615 5.52 0.00 44.36 2.40
3276 3494 6.923508 GGCAAGTGCAAAAGTTTAGTATCTTT 59.076 34.615 5.52 0.00 44.36 2.52
3277 3495 7.114953 GGCAAGTGCAAAAGTTTAGTATCTTTC 59.885 37.037 5.52 0.00 44.36 2.62
3278 3496 7.149128 GCAAGTGCAAAAGTTTAGTATCTTTCG 60.149 37.037 0.00 0.00 41.59 3.46
3279 3497 7.724305 AGTGCAAAAGTTTAGTATCTTTCGA 57.276 32.000 0.00 0.00 33.53 3.71
3280 3498 7.573627 AGTGCAAAAGTTTAGTATCTTTCGAC 58.426 34.615 0.00 0.00 33.53 4.20
3281 3499 7.441458 AGTGCAAAAGTTTAGTATCTTTCGACT 59.559 33.333 0.00 0.00 33.53 4.18
3282 3500 7.740781 GTGCAAAAGTTTAGTATCTTTCGACTC 59.259 37.037 0.00 0.00 33.53 3.36
3283 3501 7.439955 TGCAAAAGTTTAGTATCTTTCGACTCA 59.560 33.333 0.00 0.00 33.53 3.41
3284 3502 8.443937 GCAAAAGTTTAGTATCTTTCGACTCAT 58.556 33.333 0.00 0.00 33.53 2.90
3288 3506 9.490379 AAGTTTAGTATCTTTCGACTCATTTGT 57.510 29.630 0.00 0.00 0.00 2.83
3289 3507 9.141400 AGTTTAGTATCTTTCGACTCATTTGTC 57.859 33.333 0.00 0.00 0.00 3.18
3290 3508 8.922676 GTTTAGTATCTTTCGACTCATTTGTCA 58.077 33.333 0.00 0.00 36.82 3.58
3291 3509 9.483916 TTTAGTATCTTTCGACTCATTTGTCAA 57.516 29.630 0.00 0.00 36.82 3.18
3292 3510 7.962964 AGTATCTTTCGACTCATTTGTCAAA 57.037 32.000 0.00 0.00 36.82 2.69
3293 3511 8.553459 AGTATCTTTCGACTCATTTGTCAAAT 57.447 30.769 4.91 4.91 36.82 2.32
3294 3512 9.003658 AGTATCTTTCGACTCATTTGTCAAATT 57.996 29.630 8.12 0.00 36.82 1.82
3295 3513 9.612620 GTATCTTTCGACTCATTTGTCAAATTT 57.387 29.630 8.12 0.00 36.82 1.82
3296 3514 8.733857 ATCTTTCGACTCATTTGTCAAATTTC 57.266 30.769 8.12 5.00 36.82 2.17
3297 3515 7.138736 TCTTTCGACTCATTTGTCAAATTTCC 58.861 34.615 8.12 0.00 36.82 3.13
3298 3516 6.633500 TTCGACTCATTTGTCAAATTTCCT 57.367 33.333 8.12 0.00 36.82 3.36
3299 3517 7.737972 TTCGACTCATTTGTCAAATTTCCTA 57.262 32.000 8.12 0.00 36.82 2.94
3300 3518 7.737972 TCGACTCATTTGTCAAATTTCCTAA 57.262 32.000 8.12 0.00 36.82 2.69
3301 3519 7.581476 TCGACTCATTTGTCAAATTTCCTAAC 58.419 34.615 8.12 0.00 36.82 2.34
3302 3520 6.519761 CGACTCATTTGTCAAATTTCCTAACG 59.480 38.462 8.12 5.22 36.82 3.18
3303 3521 6.149633 ACTCATTTGTCAAATTTCCTAACGC 58.850 36.000 8.12 0.00 0.00 4.84
3304 3522 5.465935 TCATTTGTCAAATTTCCTAACGCC 58.534 37.500 8.12 0.00 0.00 5.68
3305 3523 5.242838 TCATTTGTCAAATTTCCTAACGCCT 59.757 36.000 8.12 0.00 0.00 5.52
3539 3758 4.530710 AGAAGACATACGGCAAGTTGTA 57.469 40.909 4.48 0.00 0.00 2.41
3565 3784 6.209589 GTCCTGCTGAGACATCTACCATATAA 59.790 42.308 0.00 0.00 34.27 0.98
3746 3965 6.903516 TCCATGTGTTGATCCTTTGAGATAT 58.096 36.000 0.00 0.00 0.00 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 4.692155 CCCTTGATTTGTTTGATTTGCTCC 59.308 41.667 0.00 0.00 0.00 4.70
100 102 7.874940 TGTTGTCATTTTAGAGATTTGTCCAG 58.125 34.615 0.00 0.00 0.00 3.86
191 193 3.623060 CCGATCTGAACATTTGATCCGTT 59.377 43.478 0.00 0.00 34.70 4.44
203 205 2.295909 CTCATCCCTCTCCGATCTGAAC 59.704 54.545 0.00 0.00 0.00 3.18
229 232 2.829384 GGCGCCCCCATCTAATCCA 61.829 63.158 18.11 0.00 0.00 3.41
268 274 3.594134 CAGTTTCTTCATCTCTCCGCTT 58.406 45.455 0.00 0.00 0.00 4.68
323 329 0.322456 ATTCCTTAGGCGCTGCACAA 60.322 50.000 7.64 0.00 0.00 3.33
340 346 2.100631 GTGACGTGCAGCGCCTATT 61.101 57.895 2.29 0.00 46.11 1.73
598 604 3.248602 GTGAAACAAGATAGGCATAGCCG 59.751 47.826 1.86 0.00 46.45 5.52
600 606 3.565902 GGGTGAAACAAGATAGGCATAGC 59.434 47.826 0.00 0.00 39.98 2.97
601 607 4.137543 GGGGTGAAACAAGATAGGCATAG 58.862 47.826 0.00 0.00 39.98 2.23
602 608 3.525609 TGGGGTGAAACAAGATAGGCATA 59.474 43.478 0.00 0.00 39.98 3.14
603 609 2.311542 TGGGGTGAAACAAGATAGGCAT 59.688 45.455 0.00 0.00 39.98 4.40
604 610 1.707989 TGGGGTGAAACAAGATAGGCA 59.292 47.619 0.00 0.00 39.98 4.75
605 611 2.507407 TGGGGTGAAACAAGATAGGC 57.493 50.000 0.00 0.00 39.98 3.93
606 612 3.203040 AGGATGGGGTGAAACAAGATAGG 59.797 47.826 0.00 0.00 39.98 2.57
607 613 4.202441 CAGGATGGGGTGAAACAAGATAG 58.798 47.826 0.00 0.00 39.98 2.08
608 614 3.591527 ACAGGATGGGGTGAAACAAGATA 59.408 43.478 0.00 0.00 43.62 1.98
609 615 2.379907 ACAGGATGGGGTGAAACAAGAT 59.620 45.455 0.00 0.00 43.62 2.40
610 616 1.780309 ACAGGATGGGGTGAAACAAGA 59.220 47.619 0.00 0.00 43.62 3.02
611 617 2.162681 GACAGGATGGGGTGAAACAAG 58.837 52.381 0.00 0.00 43.62 3.16
612 618 1.203001 GGACAGGATGGGGTGAAACAA 60.203 52.381 0.00 0.00 43.62 2.83
613 619 0.404040 GGACAGGATGGGGTGAAACA 59.596 55.000 0.00 0.00 43.62 2.83
614 620 0.323451 GGGACAGGATGGGGTGAAAC 60.323 60.000 0.00 0.00 43.62 2.78
615 621 1.847798 CGGGACAGGATGGGGTGAAA 61.848 60.000 0.00 0.00 43.62 2.69
616 622 2.297895 CGGGACAGGATGGGGTGAA 61.298 63.158 0.00 0.00 43.62 3.18
617 623 2.687200 CGGGACAGGATGGGGTGA 60.687 66.667 0.00 0.00 43.62 4.02
618 624 3.009115 ACGGGACAGGATGGGGTG 61.009 66.667 0.00 0.00 43.62 4.61
619 625 2.687566 GACGGGACAGGATGGGGT 60.688 66.667 0.00 0.00 43.62 4.95
620 626 2.297895 TTGACGGGACAGGATGGGG 61.298 63.158 0.00 0.00 43.62 4.96
621 627 1.078426 GTTGACGGGACAGGATGGG 60.078 63.158 0.00 0.00 43.62 4.00
622 628 1.078426 GGTTGACGGGACAGGATGG 60.078 63.158 0.00 0.00 43.62 3.51
623 629 1.447838 CGGTTGACGGGACAGGATG 60.448 63.158 0.00 0.00 40.20 3.51
624 630 1.189524 TTCGGTTGACGGGACAGGAT 61.190 55.000 0.00 0.00 44.45 3.24
625 631 1.401318 TTTCGGTTGACGGGACAGGA 61.401 55.000 0.00 0.00 44.45 3.86
626 632 0.533308 TTTTCGGTTGACGGGACAGG 60.533 55.000 0.00 0.00 44.45 4.00
627 633 0.865769 CTTTTCGGTTGACGGGACAG 59.134 55.000 0.00 0.00 44.45 3.51
628 634 0.533308 CCTTTTCGGTTGACGGGACA 60.533 55.000 0.00 0.00 44.45 4.02
629 635 0.533531 ACCTTTTCGGTTGACGGGAC 60.534 55.000 0.00 0.00 46.37 4.46
630 636 0.533308 CACCTTTTCGGTTGACGGGA 60.533 55.000 0.00 0.00 46.37 5.14
631 637 0.533308 TCACCTTTTCGGTTGACGGG 60.533 55.000 0.00 0.00 46.37 5.28
632 638 1.003223 GTTCACCTTTTCGGTTGACGG 60.003 52.381 0.00 0.00 46.37 4.79
633 639 1.666700 TGTTCACCTTTTCGGTTGACG 59.333 47.619 0.00 0.00 46.37 4.35
634 640 3.128068 ACTTGTTCACCTTTTCGGTTGAC 59.872 43.478 0.00 0.00 46.37 3.18
635 641 3.349022 ACTTGTTCACCTTTTCGGTTGA 58.651 40.909 0.00 0.00 46.37 3.18
636 642 3.775661 ACTTGTTCACCTTTTCGGTTG 57.224 42.857 0.00 0.00 46.37 3.77
637 643 3.759618 TCAACTTGTTCACCTTTTCGGTT 59.240 39.130 0.00 0.00 46.37 4.44
638 644 6.552295 AAGTCAACTTGTTCACCTTTTCGGT 61.552 40.000 0.00 0.00 39.95 4.69
639 645 3.377172 AGTCAACTTGTTCACCTTTTCGG 59.623 43.478 0.00 0.00 39.35 4.30
640 646 4.616181 AGTCAACTTGTTCACCTTTTCG 57.384 40.909 0.00 0.00 0.00 3.46
641 647 6.866248 TGAAAAGTCAACTTGTTCACCTTTTC 59.134 34.615 20.47 20.47 43.00 2.29
642 648 6.754193 TGAAAAGTCAACTTGTTCACCTTTT 58.246 32.000 12.40 11.01 36.12 2.27
643 649 6.015434 ACTGAAAAGTCAACTTGTTCACCTTT 60.015 34.615 12.40 0.00 36.12 3.11
644 650 5.476945 ACTGAAAAGTCAACTTGTTCACCTT 59.523 36.000 12.40 0.00 36.12 3.50
645 651 5.010282 ACTGAAAAGTCAACTTGTTCACCT 58.990 37.500 12.40 3.92 36.12 4.00
646 652 5.095490 CACTGAAAAGTCAACTTGTTCACC 58.905 41.667 12.40 0.00 36.12 4.02
647 653 5.569059 CACACTGAAAAGTCAACTTGTTCAC 59.431 40.000 12.40 0.00 36.12 3.18
648 654 5.240623 ACACACTGAAAAGTCAACTTGTTCA 59.759 36.000 14.23 14.23 36.12 3.18
649 655 5.699839 ACACACTGAAAAGTCAACTTGTTC 58.300 37.500 0.00 4.15 36.12 3.18
650 656 5.473504 AGACACACTGAAAAGTCAACTTGTT 59.526 36.000 0.00 0.00 36.12 2.83
651 657 5.003804 AGACACACTGAAAAGTCAACTTGT 58.996 37.500 0.00 0.00 36.12 3.16
652 658 5.551760 AGACACACTGAAAAGTCAACTTG 57.448 39.130 0.00 0.00 36.12 3.16
653 659 6.431234 AGAAAGACACACTGAAAAGTCAACTT 59.569 34.615 0.00 0.00 37.91 2.66
654 660 5.940470 AGAAAGACACACTGAAAAGTCAACT 59.060 36.000 0.00 0.00 31.88 3.16
655 661 6.024049 CAGAAAGACACACTGAAAAGTCAAC 58.976 40.000 0.00 0.00 31.88 3.18
656 662 5.937540 TCAGAAAGACACACTGAAAAGTCAA 59.062 36.000 0.00 0.00 37.66 3.18
657 663 5.487433 TCAGAAAGACACACTGAAAAGTCA 58.513 37.500 0.00 0.00 37.66 3.41
658 664 6.258727 TGATCAGAAAGACACACTGAAAAGTC 59.741 38.462 0.00 0.00 42.55 3.01
659 665 6.037610 GTGATCAGAAAGACACACTGAAAAGT 59.962 38.462 0.00 0.00 42.55 2.66
660 666 6.037500 TGTGATCAGAAAGACACACTGAAAAG 59.962 38.462 0.00 0.00 42.55 2.27
661 667 5.879777 TGTGATCAGAAAGACACACTGAAAA 59.120 36.000 0.00 0.00 42.55 2.29
662 668 5.294306 GTGTGATCAGAAAGACACACTGAAA 59.706 40.000 17.91 0.00 45.43 2.69
663 669 4.811024 GTGTGATCAGAAAGACACACTGAA 59.189 41.667 17.91 0.00 45.43 3.02
664 670 4.371786 GTGTGATCAGAAAGACACACTGA 58.628 43.478 17.91 0.00 45.43 3.41
665 671 4.722203 GTGTGATCAGAAAGACACACTG 57.278 45.455 17.91 0.00 45.43 3.66
668 674 3.643320 AGGAGTGTGATCAGAAAGACACA 59.357 43.478 12.71 0.00 40.99 3.72
669 675 3.993081 CAGGAGTGTGATCAGAAAGACAC 59.007 47.826 0.00 0.00 39.22 3.67
670 676 3.007290 CCAGGAGTGTGATCAGAAAGACA 59.993 47.826 0.00 0.00 0.00 3.41
671 677 3.594134 CCAGGAGTGTGATCAGAAAGAC 58.406 50.000 0.00 0.00 0.00 3.01
672 678 2.027745 GCCAGGAGTGTGATCAGAAAGA 60.028 50.000 0.00 0.00 0.00 2.52
673 679 2.354259 GCCAGGAGTGTGATCAGAAAG 58.646 52.381 0.00 0.00 0.00 2.62
674 680 1.003580 GGCCAGGAGTGTGATCAGAAA 59.996 52.381 0.00 0.00 0.00 2.52
675 681 0.615331 GGCCAGGAGTGTGATCAGAA 59.385 55.000 0.00 0.00 0.00 3.02
676 682 1.267574 GGGCCAGGAGTGTGATCAGA 61.268 60.000 4.39 0.00 0.00 3.27
677 683 1.222936 GGGCCAGGAGTGTGATCAG 59.777 63.158 4.39 0.00 0.00 2.90
678 684 2.659063 CGGGCCAGGAGTGTGATCA 61.659 63.158 4.39 0.00 0.00 2.92
679 685 2.187946 CGGGCCAGGAGTGTGATC 59.812 66.667 4.39 0.00 0.00 2.92
680 686 2.815684 TACCGGGCCAGGAGTGTGAT 62.816 60.000 30.18 6.55 34.73 3.06
681 687 3.533079 TACCGGGCCAGGAGTGTGA 62.533 63.158 30.18 3.22 34.73 3.58
682 688 3.000819 TACCGGGCCAGGAGTGTG 61.001 66.667 30.18 0.31 34.73 3.82
683 689 3.001406 GTACCGGGCCAGGAGTGT 61.001 66.667 30.18 8.60 34.73 3.55
684 690 2.589157 TTGTACCGGGCCAGGAGTG 61.589 63.158 30.18 1.57 34.73 3.51
685 691 2.203877 TTGTACCGGGCCAGGAGT 60.204 61.111 30.18 9.84 34.73 3.85
686 692 2.119484 TTGTTGTACCGGGCCAGGAG 62.119 60.000 30.18 2.83 34.73 3.69
687 693 1.706995 TTTGTTGTACCGGGCCAGGA 61.707 55.000 30.18 9.51 34.73 3.86
688 694 0.824182 TTTTGTTGTACCGGGCCAGG 60.824 55.000 21.67 21.67 37.30 4.45
689 695 1.033574 TTTTTGTTGTACCGGGCCAG 58.966 50.000 6.32 0.00 0.00 4.85
690 696 0.745468 GTTTTTGTTGTACCGGGCCA 59.255 50.000 6.32 0.00 0.00 5.36
691 697 1.034356 AGTTTTTGTTGTACCGGGCC 58.966 50.000 6.32 0.00 0.00 5.80
692 698 2.030893 GGTAGTTTTTGTTGTACCGGGC 60.031 50.000 6.32 0.00 0.00 6.13
693 699 3.902261 GGTAGTTTTTGTTGTACCGGG 57.098 47.619 6.32 0.00 0.00 5.73
696 702 3.876320 TGGTCGGTAGTTTTTGTTGTACC 59.124 43.478 0.00 0.00 32.95 3.34
697 703 5.678132 ATGGTCGGTAGTTTTTGTTGTAC 57.322 39.130 0.00 0.00 0.00 2.90
698 704 5.050227 CGAATGGTCGGTAGTTTTTGTTGTA 60.050 40.000 0.00 0.00 43.81 2.41
699 705 4.260866 CGAATGGTCGGTAGTTTTTGTTGT 60.261 41.667 0.00 0.00 43.81 3.32
700 706 4.215965 CGAATGGTCGGTAGTTTTTGTTG 58.784 43.478 0.00 0.00 43.81 3.33
701 707 4.477302 CGAATGGTCGGTAGTTTTTGTT 57.523 40.909 0.00 0.00 43.81 2.83
714 720 3.640000 CATCCGCGCCGAATGGTC 61.640 66.667 0.00 0.00 37.67 4.02
717 723 3.940640 CACCATCCGCGCCGAATG 61.941 66.667 0.00 2.87 0.00 2.67
718 724 4.155733 TCACCATCCGCGCCGAAT 62.156 61.111 0.00 0.00 0.00 3.34
719 725 4.812476 CTCACCATCCGCGCCGAA 62.812 66.667 0.00 0.00 0.00 4.30
724 730 2.887568 GACAGCTCACCATCCGCG 60.888 66.667 0.00 0.00 0.00 6.46
725 731 1.520342 GAGACAGCTCACCATCCGC 60.520 63.158 0.00 0.00 40.96 5.54
726 732 1.893062 TGAGACAGCTCACCATCCG 59.107 57.895 0.00 0.00 45.88 4.18
734 740 6.035843 TGTTTCATTGTTTTTGAGACAGCTC 58.964 36.000 0.00 0.00 41.67 4.09
735 741 5.964758 TGTTTCATTGTTTTTGAGACAGCT 58.035 33.333 0.00 0.00 34.42 4.24
736 742 6.645700 TTGTTTCATTGTTTTTGAGACAGC 57.354 33.333 0.00 0.00 38.81 4.40
738 744 9.868277 AGTATTTGTTTCATTGTTTTTGAGACA 57.132 25.926 0.00 0.00 36.69 3.41
742 748 9.239002 CGGTAGTATTTGTTTCATTGTTTTTGA 57.761 29.630 0.00 0.00 0.00 2.69
743 749 9.026074 ACGGTAGTATTTGTTTCATTGTTTTTG 57.974 29.630 0.00 0.00 0.00 2.44
744 750 9.589111 AACGGTAGTATTTGTTTCATTGTTTTT 57.411 25.926 0.00 0.00 0.00 1.94
745 751 9.589111 AAACGGTAGTATTTGTTTCATTGTTTT 57.411 25.926 0.00 0.00 28.99 2.43
746 752 9.240159 GAAACGGTAGTATTTGTTTCATTGTTT 57.760 29.630 10.76 0.00 45.81 2.83
747 753 8.791355 GAAACGGTAGTATTTGTTTCATTGTT 57.209 30.769 10.76 0.00 45.81 2.83
753 759 5.376537 CGGTGAAACGGTAGTATTTGTTTC 58.623 41.667 9.15 9.15 46.38 2.78
776 782 5.545658 TTCGTGCCTATTTCATTTCTGAC 57.454 39.130 0.00 0.00 0.00 3.51
869 881 3.429080 GAGAGGCAGAGCGCTGAGG 62.429 68.421 22.55 4.64 45.17 3.86
880 892 1.754621 CTGGAGCGTAGGAGAGGCA 60.755 63.158 0.00 0.00 41.59 4.75
881 893 1.452145 CTCTGGAGCGTAGGAGAGGC 61.452 65.000 0.00 0.00 39.33 4.70
882 894 1.452145 GCTCTGGAGCGTAGGAGAGG 61.452 65.000 6.84 0.00 45.29 3.69
883 895 2.029743 GCTCTGGAGCGTAGGAGAG 58.970 63.158 6.84 0.00 45.29 3.20
884 896 4.244326 GCTCTGGAGCGTAGGAGA 57.756 61.111 6.84 0.00 45.29 3.71
893 905 4.106925 GGGGGCACTGCTCTGGAG 62.107 72.222 0.00 0.00 0.00 3.86
894 906 4.980592 TGGGGGCACTGCTCTGGA 62.981 66.667 0.00 0.00 0.00 3.86
895 907 3.970410 TTGGGGGCACTGCTCTGG 61.970 66.667 0.00 0.00 0.00 3.86
896 908 2.674380 GTTGGGGGCACTGCTCTG 60.674 66.667 0.00 0.00 0.00 3.35
897 909 3.971702 GGTTGGGGGCACTGCTCT 61.972 66.667 0.00 0.00 0.00 4.09
898 910 3.927481 GAGGTTGGGGGCACTGCTC 62.927 68.421 0.00 0.00 0.00 4.26
904 916 3.589542 CTTGGGAGGTTGGGGGCA 61.590 66.667 0.00 0.00 0.00 5.36
934 946 1.200020 CGCGATTTTTCTTGAGCCCTT 59.800 47.619 0.00 0.00 0.00 3.95
1252 1268 2.572284 CTCCTCCCCGTCGTCAAC 59.428 66.667 0.00 0.00 0.00 3.18
1254 1270 3.654143 TCCTCCTCCCCGTCGTCA 61.654 66.667 0.00 0.00 0.00 4.35
1275 1294 3.713615 ATCGTCGTCGCCGAACTCG 62.714 63.158 1.28 0.00 46.26 4.18
1341 1360 6.316390 AGCATGGTAATTAGTAAAGAGTGTGC 59.684 38.462 0.00 0.00 0.00 4.57
1367 1389 6.927416 TCTAGCTGAAATTTACTTGGTCGTA 58.073 36.000 0.00 0.00 0.00 3.43
1390 1414 4.875544 TGCTTACGCTAATCACCATTTC 57.124 40.909 0.00 0.00 36.97 2.17
1431 1459 4.451629 AGATGCCAATCAAAAAGCAGAG 57.548 40.909 0.00 0.00 38.89 3.35
1562 1590 4.202545 GGGATTGATGATGGTGAGGAATCT 60.203 45.833 0.00 0.00 0.00 2.40
1563 1591 4.077822 GGGATTGATGATGGTGAGGAATC 58.922 47.826 0.00 0.00 0.00 2.52
1564 1592 3.464456 TGGGATTGATGATGGTGAGGAAT 59.536 43.478 0.00 0.00 0.00 3.01
1572 1603 4.018490 TGTTGACTTGGGATTGATGATGG 58.982 43.478 0.00 0.00 0.00 3.51
1575 1606 4.520111 CAGTTGTTGACTTGGGATTGATGA 59.480 41.667 0.00 0.00 36.10 2.92
1581 1612 3.885297 CAGTTCAGTTGTTGACTTGGGAT 59.115 43.478 0.00 0.00 36.10 3.85
1595 1632 8.671921 CAATATAAGTTTGATCAGCAGTTCAGT 58.328 33.333 0.00 0.00 0.00 3.41
1598 1635 7.912250 CCACAATATAAGTTTGATCAGCAGTTC 59.088 37.037 0.00 0.00 0.00 3.01
1617 1654 4.065088 GTTCAGCAGTCTGTTCCACAATA 58.935 43.478 0.93 0.00 41.10 1.90
1621 1658 1.869767 CAGTTCAGCAGTCTGTTCCAC 59.130 52.381 0.93 0.00 41.10 4.02
1624 1661 1.530293 CAGCAGTTCAGCAGTCTGTTC 59.470 52.381 0.93 0.00 41.10 3.18
1625 1662 1.139654 TCAGCAGTTCAGCAGTCTGTT 59.860 47.619 0.93 0.00 41.10 3.16
1626 1663 0.755079 TCAGCAGTTCAGCAGTCTGT 59.245 50.000 0.93 0.00 41.10 3.41
1627 1664 2.001159 GATCAGCAGTTCAGCAGTCTG 58.999 52.381 0.00 0.00 41.67 3.51
1628 1665 1.622312 TGATCAGCAGTTCAGCAGTCT 59.378 47.619 0.00 0.00 36.85 3.24
1629 1666 2.090400 TGATCAGCAGTTCAGCAGTC 57.910 50.000 0.00 0.00 36.85 3.51
1630 1667 2.556144 TTGATCAGCAGTTCAGCAGT 57.444 45.000 0.00 0.00 36.85 4.40
1631 1668 4.436242 AATTTGATCAGCAGTTCAGCAG 57.564 40.909 0.00 0.00 36.85 4.24
1632 1669 4.859304 AAATTTGATCAGCAGTTCAGCA 57.141 36.364 0.00 0.00 36.85 4.41
1633 1670 7.823149 ATTTAAATTTGATCAGCAGTTCAGC 57.177 32.000 0.00 0.00 0.00 4.26
1634 1671 9.844790 TGTATTTAAATTTGATCAGCAGTTCAG 57.155 29.630 5.91 0.00 0.00 3.02
1656 1693 8.562892 GCATTAGCAGTCTGTTTCAATATGTAT 58.437 33.333 0.93 0.00 41.58 2.29
1657 1694 7.919690 GCATTAGCAGTCTGTTTCAATATGTA 58.080 34.615 0.93 0.00 41.58 2.29
1658 1695 6.789262 GCATTAGCAGTCTGTTTCAATATGT 58.211 36.000 0.93 0.00 41.58 2.29
1685 1722 1.334869 CCTGCATGGCTAAAACGATCC 59.665 52.381 0.00 0.00 0.00 3.36
1770 1807 1.203440 ACCCCACATACCCTGAGAACT 60.203 52.381 0.00 0.00 0.00 3.01
1834 1874 0.384309 GGAATCCGGGGAAATTTCGC 59.616 55.000 23.22 23.22 39.19 4.70
1835 1875 1.676006 CAGGAATCCGGGGAAATTTCG 59.324 52.381 11.95 1.59 0.00 3.46
1856 1907 2.923020 CAAACAAACAGTGCAGTTCCAC 59.077 45.455 0.00 0.00 35.98 4.02
1862 1913 1.135024 ACCAGCAAACAAACAGTGCAG 60.135 47.619 0.00 0.00 40.83 4.41
1865 1916 2.164219 AGTCACCAGCAAACAAACAGTG 59.836 45.455 0.00 0.00 0.00 3.66
1873 1924 0.953727 TGCATGAGTCACCAGCAAAC 59.046 50.000 12.71 0.00 31.42 2.93
1874 1925 1.610038 CTTGCATGAGTCACCAGCAAA 59.390 47.619 22.19 11.72 43.63 3.68
1875 1926 1.241165 CTTGCATGAGTCACCAGCAA 58.759 50.000 21.24 21.24 42.27 3.91
1876 1927 0.109153 ACTTGCATGAGTCACCAGCA 59.891 50.000 11.45 11.45 0.00 4.41
1877 1928 1.242076 AACTTGCATGAGTCACCAGC 58.758 50.000 6.60 0.59 0.00 4.85
1878 1929 2.227388 GGAAACTTGCATGAGTCACCAG 59.773 50.000 6.60 0.00 0.00 4.00
1879 1930 2.158623 AGGAAACTTGCATGAGTCACCA 60.159 45.455 6.60 0.00 37.44 4.17
1880 1931 2.227388 CAGGAAACTTGCATGAGTCACC 59.773 50.000 6.60 6.28 40.21 4.02
1881 1932 2.880890 ACAGGAAACTTGCATGAGTCAC 59.119 45.455 6.60 0.00 40.21 3.67
1884 1935 3.144506 CTCACAGGAAACTTGCATGAGT 58.855 45.455 6.60 0.00 40.21 3.41
1885 1936 3.405831 TCTCACAGGAAACTTGCATGAG 58.594 45.455 6.60 4.26 40.21 2.90
1888 1939 4.008330 CTGATCTCACAGGAAACTTGCAT 58.992 43.478 0.00 0.00 40.21 3.96
1899 1950 2.969990 CTGTGGAACCTGATCTCACAG 58.030 52.381 7.26 7.26 45.74 3.66
1900 1951 1.002430 GCTGTGGAACCTGATCTCACA 59.998 52.381 0.00 0.00 36.94 3.58
1901 1952 1.277557 AGCTGTGGAACCTGATCTCAC 59.722 52.381 0.00 0.00 34.36 3.51
1902 1953 1.649321 AGCTGTGGAACCTGATCTCA 58.351 50.000 0.00 0.00 34.36 3.27
1903 1954 2.763448 AGTAGCTGTGGAACCTGATCTC 59.237 50.000 0.00 0.00 34.36 2.75
1904 1955 2.499289 CAGTAGCTGTGGAACCTGATCT 59.501 50.000 0.00 0.00 34.36 2.75
1905 1956 2.898705 CAGTAGCTGTGGAACCTGATC 58.101 52.381 0.00 0.00 34.36 2.92
1906 1957 1.065854 GCAGTAGCTGTGGAACCTGAT 60.066 52.381 0.00 0.00 37.91 2.90
1922 1973 1.071385 CTCCTCTTCACAACCTGCAGT 59.929 52.381 13.81 0.00 0.00 4.40
1928 1979 0.615850 CCCTCCTCCTCTTCACAACC 59.384 60.000 0.00 0.00 0.00 3.77
1967 2018 5.366768 CCCATCCCTGAAGAGTATGTTCTTA 59.633 44.000 0.00 0.00 39.45 2.10
2054 2107 3.817709 TGAAAGGAAGTTTTGGCTTGG 57.182 42.857 0.00 0.00 0.00 3.61
2055 2108 7.545615 GGTTATATGAAAGGAAGTTTTGGCTTG 59.454 37.037 0.00 0.00 0.00 4.01
2089 2142 7.224753 TGCCGAGAAAACAATAGTAATCTGATC 59.775 37.037 0.00 0.00 0.00 2.92
2097 2150 7.985184 AGATACATTGCCGAGAAAACAATAGTA 59.015 33.333 0.00 0.00 32.89 1.82
2161 2214 0.109597 GCTGCGGACACCTTTTCATG 60.110 55.000 0.00 0.00 0.00 3.07
2164 2217 0.383949 TTTGCTGCGGACACCTTTTC 59.616 50.000 0.00 0.00 0.00 2.29
2165 2218 0.102300 GTTTGCTGCGGACACCTTTT 59.898 50.000 0.00 0.00 0.00 2.27
2177 2275 6.419980 TTCTGGATTTTGTTTTGTTTGCTG 57.580 33.333 0.00 0.00 0.00 4.41
2200 2298 5.722172 ATGCACTATCCCCAGCATATTAT 57.278 39.130 0.00 0.00 45.09 1.28
2240 2338 3.074412 CAGTGCGACCAATTAACTCCTT 58.926 45.455 0.00 0.00 0.00 3.36
2306 2404 1.808945 GCCGGGATGACATGATCAATC 59.191 52.381 2.18 1.00 41.93 2.67
2333 2431 2.104729 CATTCCCATTTGCCGCCG 59.895 61.111 0.00 0.00 0.00 6.46
2369 2467 8.035984 GGGTATAAGATGGTAGAAATAGTGAGC 58.964 40.741 0.00 0.00 0.00 4.26
2384 2519 4.412199 TGGTTTCAGGGAGGGTATAAGATG 59.588 45.833 0.00 0.00 0.00 2.90
2423 2559 5.694910 CCTCAGTTAAGTCTTAGTTTTCGCA 59.305 40.000 0.00 0.00 0.00 5.10
2432 2568 7.236529 TGTAAGAGGACCTCAGTTAAGTCTTA 58.763 38.462 23.60 7.06 32.06 2.10
2440 2576 5.632034 AACTTTGTAAGAGGACCTCAGTT 57.368 39.130 23.60 18.17 32.06 3.16
2464 2605 4.036498 CCTAGCAATTCAGAGATGGCAAAG 59.964 45.833 0.00 0.00 0.00 2.77
2579 2720 5.979288 AGATTCAAGAAGAGCAAGCAATT 57.021 34.783 0.00 0.00 0.00 2.32
2617 2758 8.848474 AGTAACTAACTGCACTTCACAAATAT 57.152 30.769 0.00 0.00 36.93 1.28
2686 2895 4.974438 TCCTTCGGCCCCTGTGGT 62.974 66.667 0.00 0.00 36.04 4.16
2689 2898 1.303282 GAATTCCTTCGGCCCCTGT 59.697 57.895 0.00 0.00 0.00 4.00
2774 2983 0.322975 AGGTACTGCAGCCACTCTTG 59.677 55.000 15.27 0.00 37.18 3.02
2813 3022 2.834549 GTGAGTCCTCCCTTGATCTTGA 59.165 50.000 0.00 0.00 0.00 3.02
2814 3023 2.836981 AGTGAGTCCTCCCTTGATCTTG 59.163 50.000 0.00 0.00 0.00 3.02
2815 3024 3.197927 AGTGAGTCCTCCCTTGATCTT 57.802 47.619 0.00 0.00 0.00 2.40
2816 3025 2.938428 AGTGAGTCCTCCCTTGATCT 57.062 50.000 0.00 0.00 0.00 2.75
2817 3026 2.834549 TGAAGTGAGTCCTCCCTTGATC 59.165 50.000 0.00 0.00 27.56 2.92
2818 3027 2.836981 CTGAAGTGAGTCCTCCCTTGAT 59.163 50.000 0.00 0.00 27.56 2.57
2819 3028 2.158310 TCTGAAGTGAGTCCTCCCTTGA 60.158 50.000 0.00 0.00 27.56 3.02
2833 3042 3.197983 GGCTACTGGTTATGGTCTGAAGT 59.802 47.826 0.00 0.00 0.00 3.01
2893 3109 5.021458 ACATGAATCTTTGGCTGGAGAATT 58.979 37.500 0.00 0.00 0.00 2.17
2894 3110 4.401519 CACATGAATCTTTGGCTGGAGAAT 59.598 41.667 0.00 0.00 0.00 2.40
2917 3133 0.839946 ACAGGGCTGGTGATGGATAC 59.160 55.000 0.00 0.00 34.19 2.24
2932 3148 1.344763 GGTAGCTAGGGCATGTACAGG 59.655 57.143 2.43 2.43 41.70 4.00
2942 3158 4.651503 TCAGAAATCAGAAGGTAGCTAGGG 59.348 45.833 0.00 0.00 0.00 3.53
2992 3209 8.546244 GGTATCTTGCTTTATTTACTTACCGAC 58.454 37.037 0.00 0.00 0.00 4.79
2995 3212 8.546244 GTCGGTATCTTGCTTTATTTACTTACC 58.454 37.037 0.00 0.00 0.00 2.85
3009 3226 2.960819 ACACTCAAGTCGGTATCTTGC 58.039 47.619 0.00 0.00 41.13 4.01
3068 3286 4.080526 AGGTAGCGTTCCAATTATTCCTGT 60.081 41.667 0.00 0.00 0.00 4.00
3072 3290 6.985059 ACTCTTAGGTAGCGTTCCAATTATTC 59.015 38.462 0.00 0.00 0.00 1.75
3118 3336 9.263538 TCTACACATGTCTACGTTTATGTTTTT 57.736 29.630 0.00 0.00 31.84 1.94
3119 3337 8.706035 GTCTACACATGTCTACGTTTATGTTTT 58.294 33.333 0.00 0.00 31.84 2.43
3120 3338 7.330208 GGTCTACACATGTCTACGTTTATGTTT 59.670 37.037 0.00 0.00 31.84 2.83
3121 3339 6.810182 GGTCTACACATGTCTACGTTTATGTT 59.190 38.462 0.00 0.00 31.84 2.71
3122 3340 6.071784 TGGTCTACACATGTCTACGTTTATGT 60.072 38.462 0.00 0.00 34.31 2.29
3123 3341 6.327154 TGGTCTACACATGTCTACGTTTATG 58.673 40.000 0.00 0.00 0.00 1.90
3124 3342 6.519679 TGGTCTACACATGTCTACGTTTAT 57.480 37.500 0.00 0.00 0.00 1.40
3125 3343 5.963176 TGGTCTACACATGTCTACGTTTA 57.037 39.130 0.00 0.00 0.00 2.01
3126 3344 4.859304 TGGTCTACACATGTCTACGTTT 57.141 40.909 0.00 0.00 0.00 3.60
3139 3357 1.691434 TGAGTGTGCATGTGGTCTACA 59.309 47.619 0.00 0.00 44.87 2.74
3140 3358 2.455674 TGAGTGTGCATGTGGTCTAC 57.544 50.000 0.00 0.00 0.00 2.59
3141 3359 3.701205 AATGAGTGTGCATGTGGTCTA 57.299 42.857 0.00 0.00 0.00 2.59
3142 3360 2.574006 AATGAGTGTGCATGTGGTCT 57.426 45.000 0.00 0.00 0.00 3.85
3143 3361 2.095059 GGAAATGAGTGTGCATGTGGTC 60.095 50.000 0.00 0.00 0.00 4.02
3144 3362 1.888512 GGAAATGAGTGTGCATGTGGT 59.111 47.619 0.00 0.00 0.00 4.16
3145 3363 1.887854 TGGAAATGAGTGTGCATGTGG 59.112 47.619 0.00 0.00 0.00 4.17
3146 3364 3.191791 TCATGGAAATGAGTGTGCATGTG 59.808 43.478 5.28 0.00 42.36 3.21
3147 3365 3.423749 TCATGGAAATGAGTGTGCATGT 58.576 40.909 5.28 0.00 42.36 3.21
3148 3366 4.171005 GTTCATGGAAATGAGTGTGCATG 58.829 43.478 0.00 0.00 42.91 4.06
3149 3367 3.827876 TGTTCATGGAAATGAGTGTGCAT 59.172 39.130 0.00 0.00 31.46 3.96
3150 3368 3.220940 TGTTCATGGAAATGAGTGTGCA 58.779 40.909 0.00 0.00 31.46 4.57
3151 3369 3.921119 TGTTCATGGAAATGAGTGTGC 57.079 42.857 0.00 0.00 31.46 4.57
3152 3370 5.562917 CGTATGTTCATGGAAATGAGTGTG 58.437 41.667 0.00 0.00 31.46 3.82
3153 3371 4.094887 GCGTATGTTCATGGAAATGAGTGT 59.905 41.667 0.00 0.00 31.46 3.55
3154 3372 4.094739 TGCGTATGTTCATGGAAATGAGTG 59.905 41.667 0.00 0.00 31.46 3.51
3155 3373 4.094887 GTGCGTATGTTCATGGAAATGAGT 59.905 41.667 0.00 0.00 31.46 3.41
3156 3374 4.094739 TGTGCGTATGTTCATGGAAATGAG 59.905 41.667 0.00 0.00 31.46 2.90
3157 3375 4.006319 TGTGCGTATGTTCATGGAAATGA 58.994 39.130 0.00 0.00 0.00 2.57
3158 3376 4.354071 TGTGCGTATGTTCATGGAAATG 57.646 40.909 0.00 0.00 0.00 2.32
3159 3377 6.712095 AGATATGTGCGTATGTTCATGGAAAT 59.288 34.615 0.00 0.00 0.00 2.17
3160 3378 6.054941 AGATATGTGCGTATGTTCATGGAAA 58.945 36.000 0.00 0.00 0.00 3.13
3161 3379 5.610398 AGATATGTGCGTATGTTCATGGAA 58.390 37.500 0.00 0.00 0.00 3.53
3162 3380 5.213891 AGATATGTGCGTATGTTCATGGA 57.786 39.130 0.00 0.00 0.00 3.41
3163 3381 7.118245 ACAATAGATATGTGCGTATGTTCATGG 59.882 37.037 0.00 0.00 0.00 3.66
3164 3382 8.021955 ACAATAGATATGTGCGTATGTTCATG 57.978 34.615 0.00 0.00 0.00 3.07
3165 3383 8.498358 CAACAATAGATATGTGCGTATGTTCAT 58.502 33.333 0.00 0.00 0.00 2.57
3166 3384 7.708752 TCAACAATAGATATGTGCGTATGTTCA 59.291 33.333 0.00 0.00 0.00 3.18
3167 3385 8.072238 TCAACAATAGATATGTGCGTATGTTC 57.928 34.615 0.00 0.00 0.00 3.18
3168 3386 8.607441 ATCAACAATAGATATGTGCGTATGTT 57.393 30.769 0.00 0.00 0.00 2.71
3169 3387 8.607441 AATCAACAATAGATATGTGCGTATGT 57.393 30.769 0.00 0.00 0.00 2.29
3170 3388 9.882996 AAAATCAACAATAGATATGTGCGTATG 57.117 29.630 0.00 0.00 0.00 2.39
3173 3391 9.882996 CATAAAATCAACAATAGATATGTGCGT 57.117 29.630 0.00 0.00 0.00 5.24
3174 3392 9.333497 CCATAAAATCAACAATAGATATGTGCG 57.667 33.333 0.00 0.00 0.00 5.34
3175 3393 9.132521 GCCATAAAATCAACAATAGATATGTGC 57.867 33.333 0.00 0.00 0.00 4.57
3176 3394 9.630098 GGCCATAAAATCAACAATAGATATGTG 57.370 33.333 0.00 0.00 0.00 3.21
3177 3395 8.806146 GGGCCATAAAATCAACAATAGATATGT 58.194 33.333 4.39 0.00 0.00 2.29
3178 3396 9.028284 AGGGCCATAAAATCAACAATAGATATG 57.972 33.333 6.18 0.00 0.00 1.78
3180 3398 9.739276 CTAGGGCCATAAAATCAACAATAGATA 57.261 33.333 6.18 0.00 0.00 1.98
3181 3399 7.671398 CCTAGGGCCATAAAATCAACAATAGAT 59.329 37.037 6.18 0.00 0.00 1.98
3182 3400 7.004086 CCTAGGGCCATAAAATCAACAATAGA 58.996 38.462 6.18 0.00 0.00 1.98
3183 3401 6.294731 GCCTAGGGCCATAAAATCAACAATAG 60.295 42.308 11.72 0.00 44.06 1.73
3184 3402 5.538433 GCCTAGGGCCATAAAATCAACAATA 59.462 40.000 11.72 0.00 44.06 1.90
3185 3403 4.344968 GCCTAGGGCCATAAAATCAACAAT 59.655 41.667 11.72 0.00 44.06 2.71
3186 3404 3.704061 GCCTAGGGCCATAAAATCAACAA 59.296 43.478 11.72 0.00 44.06 2.83
3187 3405 3.295973 GCCTAGGGCCATAAAATCAACA 58.704 45.455 11.72 0.00 44.06 3.33
3201 3419 7.712204 TTTAGAATTTTAAGTTGGCCTAGGG 57.288 36.000 11.72 0.00 0.00 3.53
3202 3420 9.803315 GATTTTAGAATTTTAAGTTGGCCTAGG 57.197 33.333 3.67 3.67 0.00 3.02
3205 3423 9.088987 TGAGATTTTAGAATTTTAAGTTGGCCT 57.911 29.630 3.32 0.00 0.00 5.19
3206 3424 9.705290 TTGAGATTTTAGAATTTTAAGTTGGCC 57.295 29.630 0.00 0.00 0.00 5.36
3217 3435 9.933723 CCAAATGGTTCTTGAGATTTTAGAATT 57.066 29.630 0.00 0.00 31.25 2.17
3218 3436 8.037166 GCCAAATGGTTCTTGAGATTTTAGAAT 58.963 33.333 0.71 0.00 37.57 2.40
3219 3437 7.233348 AGCCAAATGGTTCTTGAGATTTTAGAA 59.767 33.333 0.71 0.00 37.57 2.10
3220 3438 6.721208 AGCCAAATGGTTCTTGAGATTTTAGA 59.279 34.615 0.71 0.00 37.57 2.10
3221 3439 6.928520 AGCCAAATGGTTCTTGAGATTTTAG 58.071 36.000 0.71 0.00 37.57 1.85
3222 3440 6.916360 AGCCAAATGGTTCTTGAGATTTTA 57.084 33.333 0.71 0.00 37.57 1.52
3223 3441 5.813513 AGCCAAATGGTTCTTGAGATTTT 57.186 34.783 0.71 0.00 37.57 1.82
3224 3442 5.544650 CAAGCCAAATGGTTCTTGAGATTT 58.455 37.500 12.02 0.00 37.43 2.17
3225 3443 4.562143 GCAAGCCAAATGGTTCTTGAGATT 60.562 41.667 18.36 0.00 37.43 2.40
3226 3444 3.056322 GCAAGCCAAATGGTTCTTGAGAT 60.056 43.478 18.36 0.00 37.43 2.75
3227 3445 2.297033 GCAAGCCAAATGGTTCTTGAGA 59.703 45.455 18.36 0.00 37.43 3.27
3228 3446 2.036217 TGCAAGCCAAATGGTTCTTGAG 59.964 45.455 18.36 0.64 37.43 3.02
3229 3447 2.037901 TGCAAGCCAAATGGTTCTTGA 58.962 42.857 18.36 6.16 37.43 3.02
3230 3448 2.529780 TGCAAGCCAAATGGTTCTTG 57.470 45.000 12.72 12.72 37.93 3.02
3231 3449 2.289819 CCATGCAAGCCAAATGGTTCTT 60.290 45.455 0.71 0.00 36.82 2.52
3232 3450 1.276989 CCATGCAAGCCAAATGGTTCT 59.723 47.619 0.71 0.00 36.82 3.01
3233 3451 1.729284 CCATGCAAGCCAAATGGTTC 58.271 50.000 0.71 0.00 36.82 3.62
3234 3452 0.321830 GCCATGCAAGCCAAATGGTT 60.322 50.000 10.44 0.00 42.44 3.67
3235 3453 1.297364 GCCATGCAAGCCAAATGGT 59.703 52.632 10.44 0.00 42.44 3.55
3236 3454 0.321741 TTGCCATGCAAGCCAAATGG 60.322 50.000 9.38 2.86 43.99 3.16
3237 3455 3.234979 TTGCCATGCAAGCCAAATG 57.765 47.368 9.38 0.00 43.99 2.32
3247 3465 1.585297 AACTTTTGCACTTGCCATGC 58.415 45.000 0.00 0.00 43.68 4.06
3248 3466 4.370917 ACTAAACTTTTGCACTTGCCATG 58.629 39.130 0.00 0.00 41.18 3.66
3249 3467 4.670896 ACTAAACTTTTGCACTTGCCAT 57.329 36.364 0.00 0.00 41.18 4.40
3250 3468 5.534654 AGATACTAAACTTTTGCACTTGCCA 59.465 36.000 0.00 0.00 41.18 4.92
3251 3469 6.013842 AGATACTAAACTTTTGCACTTGCC 57.986 37.500 0.00 0.00 41.18 4.52
3252 3470 7.149128 CGAAAGATACTAAACTTTTGCACTTGC 60.149 37.037 0.00 0.00 36.63 4.01
3253 3471 8.067784 TCGAAAGATACTAAACTTTTGCACTTG 58.932 33.333 0.00 0.00 37.40 3.16
3254 3472 8.068380 GTCGAAAGATACTAAACTTTTGCACTT 58.932 33.333 0.00 0.00 45.19 3.16
3255 3473 7.441458 AGTCGAAAGATACTAAACTTTTGCACT 59.559 33.333 0.00 0.00 45.19 4.40
3256 3474 7.573627 AGTCGAAAGATACTAAACTTTTGCAC 58.426 34.615 0.00 0.00 45.19 4.57
3257 3475 7.439955 TGAGTCGAAAGATACTAAACTTTTGCA 59.560 33.333 0.00 0.00 45.19 4.08
3258 3476 7.793902 TGAGTCGAAAGATACTAAACTTTTGC 58.206 34.615 0.00 0.00 45.19 3.68
3262 3480 9.490379 ACAAATGAGTCGAAAGATACTAAACTT 57.510 29.630 0.00 0.00 45.19 2.66
3263 3481 9.141400 GACAAATGAGTCGAAAGATACTAAACT 57.859 33.333 0.00 0.00 45.19 2.66
3264 3482 8.922676 TGACAAATGAGTCGAAAGATACTAAAC 58.077 33.333 0.00 0.00 45.19 2.01
3265 3483 9.483916 TTGACAAATGAGTCGAAAGATACTAAA 57.516 29.630 0.00 0.00 45.19 1.85
3266 3484 9.483916 TTTGACAAATGAGTCGAAAGATACTAA 57.516 29.630 0.00 0.00 45.19 2.24
3267 3485 9.653287 ATTTGACAAATGAGTCGAAAGATACTA 57.347 29.630 12.62 0.00 43.20 1.82
3268 3486 7.962964 TTTGACAAATGAGTCGAAAGATACT 57.037 32.000 0.00 0.00 45.19 2.12
3269 3487 9.612620 AAATTTGACAAATGAGTCGAAAGATAC 57.387 29.630 14.05 0.00 43.20 2.24
3270 3488 9.825972 GAAATTTGACAAATGAGTCGAAAGATA 57.174 29.630 14.05 0.00 43.20 1.98
3271 3489 7.809806 GGAAATTTGACAAATGAGTCGAAAGAT 59.190 33.333 14.05 0.00 43.20 2.40
3272 3490 7.013274 AGGAAATTTGACAAATGAGTCGAAAGA 59.987 33.333 14.05 0.00 43.20 2.52
3273 3491 7.141363 AGGAAATTTGACAAATGAGTCGAAAG 58.859 34.615 14.05 0.00 43.20 2.62
3274 3492 7.038154 AGGAAATTTGACAAATGAGTCGAAA 57.962 32.000 14.05 2.83 43.20 3.46
3275 3493 6.633500 AGGAAATTTGACAAATGAGTCGAA 57.367 33.333 14.05 0.00 43.87 3.71
3276 3494 7.570507 CGTTAGGAAATTTGACAAATGAGTCGA 60.571 37.037 14.05 2.62 41.41 4.20
3277 3495 6.519761 CGTTAGGAAATTTGACAAATGAGTCG 59.480 38.462 14.05 9.09 41.41 4.18
3278 3496 6.305638 GCGTTAGGAAATTTGACAAATGAGTC 59.694 38.462 14.05 11.31 38.99 3.36
3279 3497 6.149633 GCGTTAGGAAATTTGACAAATGAGT 58.850 36.000 14.05 3.29 0.00 3.41
3280 3498 5.572896 GGCGTTAGGAAATTTGACAAATGAG 59.427 40.000 14.05 2.18 0.00 2.90
3281 3499 5.242838 AGGCGTTAGGAAATTTGACAAATGA 59.757 36.000 14.05 0.00 0.00 2.57
3282 3500 5.469479 AGGCGTTAGGAAATTTGACAAATG 58.531 37.500 14.05 0.84 0.00 2.32
3283 3501 5.722021 AGGCGTTAGGAAATTTGACAAAT 57.278 34.783 7.62 7.62 0.00 2.32
3284 3502 5.766174 AGTAGGCGTTAGGAAATTTGACAAA 59.234 36.000 2.48 2.48 0.00 2.83
3285 3503 5.310451 AGTAGGCGTTAGGAAATTTGACAA 58.690 37.500 0.00 0.00 0.00 3.18
3286 3504 4.901868 AGTAGGCGTTAGGAAATTTGACA 58.098 39.130 0.00 0.00 0.00 3.58
3287 3505 4.032558 CGAGTAGGCGTTAGGAAATTTGAC 59.967 45.833 0.00 0.00 0.00 3.18
3288 3506 4.082081 TCGAGTAGGCGTTAGGAAATTTGA 60.082 41.667 0.00 0.00 0.00 2.69
3289 3507 4.178540 TCGAGTAGGCGTTAGGAAATTTG 58.821 43.478 0.00 0.00 0.00 2.32
3290 3508 4.460948 TCGAGTAGGCGTTAGGAAATTT 57.539 40.909 0.00 0.00 0.00 1.82
3291 3509 4.430908 CTTCGAGTAGGCGTTAGGAAATT 58.569 43.478 0.00 0.00 0.00 1.82
3292 3510 3.181478 CCTTCGAGTAGGCGTTAGGAAAT 60.181 47.826 0.00 0.00 36.78 2.17
3293 3511 2.165030 CCTTCGAGTAGGCGTTAGGAAA 59.835 50.000 0.00 0.00 36.78 3.13
3294 3512 1.747355 CCTTCGAGTAGGCGTTAGGAA 59.253 52.381 0.00 0.00 36.78 3.36
3295 3513 1.386533 CCTTCGAGTAGGCGTTAGGA 58.613 55.000 0.00 0.00 36.78 2.94
3296 3514 0.384669 CCCTTCGAGTAGGCGTTAGG 59.615 60.000 0.00 0.00 35.50 2.69
3297 3515 1.065251 GTCCCTTCGAGTAGGCGTTAG 59.935 57.143 0.00 0.00 33.73 2.34
3298 3516 1.098050 GTCCCTTCGAGTAGGCGTTA 58.902 55.000 0.00 0.00 33.73 3.18
3299 3517 1.888736 GTCCCTTCGAGTAGGCGTT 59.111 57.895 0.00 0.00 33.73 4.84
3300 3518 2.404995 CGTCCCTTCGAGTAGGCGT 61.405 63.158 0.00 0.00 33.73 5.68
3301 3519 2.404995 ACGTCCCTTCGAGTAGGCG 61.405 63.158 0.00 0.57 33.73 5.52
3302 3520 1.139095 CACGTCCCTTCGAGTAGGC 59.861 63.158 0.00 0.00 33.73 3.93
3303 3521 0.733729 CTCACGTCCCTTCGAGTAGG 59.266 60.000 0.00 0.00 34.92 3.18
3304 3522 0.733729 CCTCACGTCCCTTCGAGTAG 59.266 60.000 0.00 0.00 34.70 2.57
3305 3523 0.037303 ACCTCACGTCCCTTCGAGTA 59.963 55.000 0.00 0.00 34.70 2.59
3539 3758 2.291865 TGGTAGATGTCTCAGCAGGACT 60.292 50.000 5.58 0.00 35.04 3.85
3746 3965 4.224370 GGTATTGGGTCTTGGTAGAGTTGA 59.776 45.833 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.