Multiple sequence alignment - TraesCS7B01G031400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G031400 chr7B 100.000 2570 0 0 1 2570 31785170 31787739 0.000000e+00 4747.0
1 TraesCS7B01G031400 chr7B 93.162 117 8 0 2369 2485 491150099 491149983 3.400000e-39 172.0
2 TraesCS7B01G031400 chr7B 90.265 113 9 2 2126 2237 688150118 688150007 2.060000e-31 147.0
3 TraesCS7B01G031400 chr7B 81.481 108 15 4 2135 2241 563288831 563288934 1.640000e-12 84.2
4 TraesCS7B01G031400 chr7D 91.725 1704 71 21 1 1659 82713459 82715137 0.000000e+00 2302.0
5 TraesCS7B01G031400 chr7D 86.604 530 34 21 1635 2131 82715148 82715673 3.740000e-153 551.0
6 TraesCS7B01G031400 chr7D 92.373 118 9 0 2368 2485 634072952 634072835 4.400000e-38 169.0
7 TraesCS7B01G031400 chr7D 88.235 68 7 1 2262 2328 234635330 234635397 2.120000e-11 80.5
8 TraesCS7B01G031400 chr7A 89.722 1693 103 28 569 2232 84689927 84691577 0.000000e+00 2097.0
9 TraesCS7B01G031400 chr7A 90.984 488 22 5 35 500 84687585 84688072 2.790000e-179 638.0
10 TraesCS7B01G031400 chr7A 90.593 489 23 6 35 500 84688284 84688772 6.040000e-176 627.0
11 TraesCS7B01G031400 chr7A 90.593 489 23 5 35 500 84688989 84689477 6.040000e-176 627.0
12 TraesCS7B01G031400 chr7A 91.453 117 10 0 2369 2485 318046709 318046593 7.360000e-36 161.0
13 TraesCS7B01G031400 chr7A 96.703 91 3 0 496 586 84689536 84689626 4.430000e-33 152.0
14 TraesCS7B01G031400 chr7A 92.079 101 7 1 486 586 84688128 84688227 9.590000e-30 141.0
15 TraesCS7B01G031400 chr7A 92.079 101 7 1 486 586 84688834 84688933 9.590000e-30 141.0
16 TraesCS7B01G031400 chr7A 88.235 68 7 1 2262 2328 301314012 301314079 2.120000e-11 80.5
17 TraesCS7B01G031400 chr7A 78.740 127 19 6 2133 2255 557557032 557556910 7.620000e-11 78.7
18 TraesCS7B01G031400 chr7A 100.000 30 0 0 1 30 84668016 84668045 3.570000e-04 56.5
19 TraesCS7B01G031400 chr7A 100.000 30 0 0 1 30 84678414 84678443 3.570000e-04 56.5
20 TraesCS7B01G031400 chr6B 93.333 120 8 0 2369 2488 438623455 438623336 7.310000e-41 178.0
21 TraesCS7B01G031400 chr6B 90.984 122 9 2 2369 2490 150238241 150238122 2.050000e-36 163.0
22 TraesCS7B01G031400 chr1B 93.966 116 7 0 2364 2479 118128568 118128683 2.630000e-40 176.0
23 TraesCS7B01G031400 chr1B 93.103 116 7 1 2369 2484 514570479 514570365 4.400000e-38 169.0
24 TraesCS7B01G031400 chr1B 88.095 84 6 4 2168 2248 268454746 268454664 2.100000e-16 97.1
25 TraesCS7B01G031400 chr4D 93.043 115 8 0 2374 2488 386838019 386837905 4.400000e-38 169.0
26 TraesCS7B01G031400 chr1D 90.400 125 12 0 2362 2486 47497082 47497206 5.690000e-37 165.0
27 TraesCS7B01G031400 chr1D 92.453 106 7 1 2132 2237 293904768 293904664 1.590000e-32 150.0
28 TraesCS7B01G031400 chr1D 90.000 110 10 1 2132 2240 460608685 460608794 9.590000e-30 141.0
29 TraesCS7B01G031400 chr4A 88.136 118 12 2 2121 2237 30396718 30396602 3.450000e-29 139.0
30 TraesCS7B01G031400 chr4A 85.185 135 17 3 2103 2237 586767985 586768116 4.460000e-28 135.0
31 TraesCS7B01G031400 chr6D 87.395 119 13 2 2125 2242 454801536 454801419 4.460000e-28 135.0
32 TraesCS7B01G031400 chr3B 87.826 115 12 2 2124 2237 755167572 755167459 1.600000e-27 134.0
33 TraesCS7B01G031400 chr3B 91.026 78 5 2 2163 2239 791083863 791083939 1.260000e-18 104.0
34 TraesCS7B01G031400 chr3B 95.652 46 2 0 2283 2328 87256636 87256591 9.860000e-10 75.0
35 TraesCS7B01G031400 chr2B 78.788 198 32 8 2138 2331 364955514 364955705 9.660000e-25 124.0
36 TraesCS7B01G031400 chr2A 85.586 111 13 2 2140 2249 745052069 745051961 2.090000e-21 113.0
37 TraesCS7B01G031400 chr2A 77.540 187 30 10 2128 2311 735332453 735332630 4.520000e-18 102.0
38 TraesCS7B01G031400 chr6A 89.873 79 7 1 2251 2328 158455608 158455530 1.630000e-17 100.0
39 TraesCS7B01G031400 chr5B 89.873 79 7 1 2251 2328 451282251 451282329 1.630000e-17 100.0
40 TraesCS7B01G031400 chr3A 92.647 68 4 1 2262 2328 331000703 331000770 2.100000e-16 97.1
41 TraesCS7B01G031400 chr3A 88.235 68 7 1 2262 2328 366823110 366823177 2.120000e-11 80.5
42 TraesCS7B01G031400 chr2D 79.839 124 16 8 2135 2253 131383021 131382902 5.890000e-12 82.4
43 TraesCS7B01G031400 chr1A 79.310 116 18 4 2135 2248 117815356 117815467 2.740000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G031400 chr7B 31785170 31787739 2569 False 4747.000000 4747 100.000000 1 2570 1 chr7B.!!$F1 2569
1 TraesCS7B01G031400 chr7D 82713459 82715673 2214 False 1426.500000 2302 89.164500 1 2131 2 chr7D.!!$F2 2130
2 TraesCS7B01G031400 chr7A 84687585 84691577 3992 False 631.857143 2097 91.821857 35 2232 7 chr7A.!!$F4 2197

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
989 2828 0.179156 ACACCCGCGTAGTATCAACG 60.179 55.0 4.92 0.0 43.12 4.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2465 4387 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.0 5.23 0.0 44.66 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 116 3.527533 CCATGGCAAACTGGATCAATTG 58.472 45.455 0.00 0.00 34.24 2.32
111 120 2.613691 GCAAACTGGATCAATTGCCTG 58.386 47.619 0.00 4.14 41.67 4.85
126 138 1.141657 TGCCTGTGAAGTTCAAGCTCT 59.858 47.619 19.01 0.00 0.00 4.09
146 158 4.667573 TCTAGAAGAGGAAGCTTGAGACA 58.332 43.478 2.10 0.00 0.00 3.41
148 160 4.270245 AGAAGAGGAAGCTTGAGACAAG 57.730 45.455 2.10 7.07 0.00 3.16
227 256 4.350368 TGGTTGAGTTGCTGTTGATCTA 57.650 40.909 0.00 0.00 0.00 1.98
281 310 1.421268 TGACCAGAGGCAGTCATTTGT 59.579 47.619 0.00 0.00 38.07 2.83
284 313 2.624838 ACCAGAGGCAGTCATTTGTTTG 59.375 45.455 0.00 0.00 0.00 2.93
288 319 4.505191 CAGAGGCAGTCATTTGTTTGTTTG 59.495 41.667 0.00 0.00 0.00 2.93
358 389 1.220749 GCCACTATTCCTGACCGCA 59.779 57.895 0.00 0.00 0.00 5.69
400 1836 3.641648 CAAGCATTTGGTGATGTTCGTT 58.358 40.909 0.00 0.00 0.00 3.85
413 1849 1.811359 TGTTCGTTTTGGTGAACCGTT 59.189 42.857 2.98 0.00 42.93 4.44
482 1918 7.592938 TCACAAAACAGACACCATTCATAATC 58.407 34.615 0.00 0.00 0.00 1.75
593 2411 2.819348 GCCTTCCTCTTGTTGGGATGTT 60.819 50.000 0.00 0.00 0.00 2.71
595 2413 4.265073 CCTTCCTCTTGTTGGGATGTTAG 58.735 47.826 0.00 0.00 0.00 2.34
704 2530 3.575805 AGAAAATCTTGGCACTGGGAAA 58.424 40.909 0.00 0.00 0.00 3.13
705 2531 4.162651 AGAAAATCTTGGCACTGGGAAAT 58.837 39.130 0.00 0.00 0.00 2.17
723 2550 7.730084 TGGGAAATGATCTGACTACTGAATAG 58.270 38.462 0.00 0.00 36.89 1.73
742 2569 6.266330 TGAATAGTGATCATAGAGACACAGGG 59.734 42.308 0.00 0.00 33.49 4.45
797 2628 1.741525 CAACAAACCTGCCCACCTG 59.258 57.895 0.00 0.00 0.00 4.00
882 2720 6.963796 ACCGGACTACGTGTATCTATTTAAG 58.036 40.000 9.46 0.00 42.24 1.85
898 2737 2.055689 TAAGCGGCATCATCCCCCAG 62.056 60.000 1.45 0.00 0.00 4.45
987 2826 1.273048 ACAACACCCGCGTAGTATCAA 59.727 47.619 4.92 0.00 0.00 2.57
988 2827 1.657094 CAACACCCGCGTAGTATCAAC 59.343 52.381 4.92 0.00 0.00 3.18
989 2828 0.179156 ACACCCGCGTAGTATCAACG 60.179 55.000 4.92 0.00 43.12 4.10
1026 2865 2.584418 CTGCACCGGCTCATCTCG 60.584 66.667 0.00 0.00 41.91 4.04
1131 2970 3.264574 CCTGGAAATCGAGGCCAAA 57.735 52.632 5.01 0.00 35.10 3.28
1146 2985 1.482182 GCCAAATTCTCCCACATTCCC 59.518 52.381 0.00 0.00 0.00 3.97
1218 3059 4.147306 GTCGTTGCGCATTTTCATTGTTTA 59.853 37.500 12.75 0.00 0.00 2.01
1221 3062 6.582672 TCGTTGCGCATTTTCATTGTTTAATA 59.417 30.769 12.75 0.00 0.00 0.98
1251 3092 2.032681 AGCTTCTTCGTGGTGGCC 59.967 61.111 0.00 0.00 0.00 5.36
1633 3474 1.200020 GGGTGGTCTCGCAAATTTCAG 59.800 52.381 0.00 0.00 0.00 3.02
1676 3551 4.561735 TGTTCGGTGATTTCTTTTGGTC 57.438 40.909 0.00 0.00 0.00 4.02
1678 3553 4.582656 TGTTCGGTGATTTCTTTTGGTCAT 59.417 37.500 0.00 0.00 0.00 3.06
1680 3555 4.393834 TCGGTGATTTCTTTTGGTCATGA 58.606 39.130 0.00 0.00 0.00 3.07
1705 3585 9.128107 GATCGATCATCTTCTTCATTTAGTCTC 57.872 37.037 20.52 0.00 0.00 3.36
1736 3627 2.746277 GGGCGAAATGTGGCGAGT 60.746 61.111 0.00 0.00 0.00 4.18
1741 3632 1.950472 CGAAATGTGGCGAGTTGTTC 58.050 50.000 0.00 0.00 0.00 3.18
1779 3671 2.148916 TCGTTATGCCGATCATGTCC 57.851 50.000 0.00 0.00 36.63 4.02
1811 3704 9.994432 GGTGTTGAAGATTTGAAATGATAGTAG 57.006 33.333 0.00 0.00 0.00 2.57
1839 3732 6.913170 TGAACTCATATTTTTGAGCAAGGTC 58.087 36.000 1.51 0.00 45.75 3.85
1855 3748 1.048601 GGTCAAGAGGTGTCAGTCCA 58.951 55.000 0.00 0.00 0.00 4.02
1861 3757 2.555664 AGAGGTGTCAGTCCATGGAAT 58.444 47.619 18.20 13.77 0.00 3.01
1910 3815 3.690139 TGTCTTGCGTACTGGTTTTCAAA 59.310 39.130 0.00 0.00 0.00 2.69
1913 3818 3.955771 TGCGTACTGGTTTTCAAAGAC 57.044 42.857 0.00 0.00 0.00 3.01
1932 3837 4.266714 AGACGTCACCCTCAAAAGAAAAA 58.733 39.130 19.50 0.00 0.00 1.94
1933 3838 4.335594 AGACGTCACCCTCAAAAGAAAAAG 59.664 41.667 19.50 0.00 0.00 2.27
1990 3895 4.825634 TCTCGAAGAAACTAACCTGTGAGA 59.174 41.667 0.00 0.00 34.09 3.27
1991 3896 5.048643 TCTCGAAGAAACTAACCTGTGAGAG 60.049 44.000 0.00 0.00 34.09 3.20
2065 3987 1.680338 AGACAAGGCAGTTTGGTGAC 58.320 50.000 0.00 0.00 32.32 3.67
2147 4069 9.901172 TCTTTCTTTAAAGTACTTCCTCTGTTT 57.099 29.630 14.74 0.00 42.36 2.83
2204 4126 6.209788 TGGACTACAACATGCGGATGTATATA 59.790 38.462 23.47 13.89 42.30 0.86
2207 4129 7.313646 ACTACAACATGCGGATGTATATAGAC 58.686 38.462 27.12 0.00 42.30 2.59
2244 4166 9.788960 GTGTAGATTCACTCTTTTTCTTTTTGT 57.211 29.630 0.00 0.00 35.28 2.83
2245 4167 9.787532 TGTAGATTCACTCTTTTTCTTTTTGTG 57.212 29.630 0.00 0.00 35.28 3.33
2248 4170 9.358872 AGATTCACTCTTTTTCTTTTTGTGAAC 57.641 29.630 0.00 0.00 42.86 3.18
2249 4171 9.139174 GATTCACTCTTTTTCTTTTTGTGAACA 57.861 29.630 0.00 0.00 42.86 3.18
2250 4172 9.657419 ATTCACTCTTTTTCTTTTTGTGAACAT 57.343 25.926 0.00 0.00 42.86 2.71
2252 4174 9.787532 TCACTCTTTTTCTTTTTGTGAACATAG 57.212 29.630 0.00 0.00 31.30 2.23
2253 4175 9.787532 CACTCTTTTTCTTTTTGTGAACATAGA 57.212 29.630 0.00 0.00 0.00 1.98
2268 4190 7.692460 TGAACATAGATTCACTCATTTTGCT 57.308 32.000 0.00 0.00 33.62 3.91
2269 4191 8.114331 TGAACATAGATTCACTCATTTTGCTT 57.886 30.769 0.00 0.00 33.62 3.91
2270 4192 8.239314 TGAACATAGATTCACTCATTTTGCTTC 58.761 33.333 0.00 0.00 33.62 3.86
2271 4193 6.779117 ACATAGATTCACTCATTTTGCTTCG 58.221 36.000 0.00 0.00 0.00 3.79
2272 4194 6.372659 ACATAGATTCACTCATTTTGCTTCGT 59.627 34.615 0.00 0.00 0.00 3.85
2273 4195 5.695851 AGATTCACTCATTTTGCTTCGTT 57.304 34.783 0.00 0.00 0.00 3.85
2274 4196 5.455392 AGATTCACTCATTTTGCTTCGTTG 58.545 37.500 0.00 0.00 0.00 4.10
2275 4197 4.630894 TTCACTCATTTTGCTTCGTTGT 57.369 36.364 0.00 0.00 0.00 3.32
2276 4198 3.951306 TCACTCATTTTGCTTCGTTGTG 58.049 40.909 0.00 0.00 0.00 3.33
2277 4199 3.044986 CACTCATTTTGCTTCGTTGTGG 58.955 45.455 0.00 0.00 0.00 4.17
2278 4200 2.687935 ACTCATTTTGCTTCGTTGTGGT 59.312 40.909 0.00 0.00 0.00 4.16
2279 4201 3.243068 ACTCATTTTGCTTCGTTGTGGTC 60.243 43.478 0.00 0.00 0.00 4.02
2280 4202 2.034053 TCATTTTGCTTCGTTGTGGTCC 59.966 45.455 0.00 0.00 0.00 4.46
2281 4203 1.757682 TTTTGCTTCGTTGTGGTCCT 58.242 45.000 0.00 0.00 0.00 3.85
2282 4204 1.757682 TTTGCTTCGTTGTGGTCCTT 58.242 45.000 0.00 0.00 0.00 3.36
2283 4205 1.757682 TTGCTTCGTTGTGGTCCTTT 58.242 45.000 0.00 0.00 0.00 3.11
2284 4206 1.021202 TGCTTCGTTGTGGTCCTTTG 58.979 50.000 0.00 0.00 0.00 2.77
2285 4207 1.021968 GCTTCGTTGTGGTCCTTTGT 58.978 50.000 0.00 0.00 0.00 2.83
2286 4208 1.404035 GCTTCGTTGTGGTCCTTTGTT 59.596 47.619 0.00 0.00 0.00 2.83
2287 4209 2.794631 GCTTCGTTGTGGTCCTTTGTTG 60.795 50.000 0.00 0.00 0.00 3.33
2288 4210 1.384525 TCGTTGTGGTCCTTTGTTGG 58.615 50.000 0.00 0.00 0.00 3.77
2289 4211 1.065345 TCGTTGTGGTCCTTTGTTGGA 60.065 47.619 0.00 0.00 0.00 3.53
2290 4212 1.746220 CGTTGTGGTCCTTTGTTGGAA 59.254 47.619 0.00 0.00 37.93 3.53
2291 4213 2.360801 CGTTGTGGTCCTTTGTTGGAAT 59.639 45.455 0.00 0.00 37.93 3.01
2292 4214 3.550030 CGTTGTGGTCCTTTGTTGGAATC 60.550 47.826 0.00 0.00 37.93 2.52
2293 4215 3.593442 TGTGGTCCTTTGTTGGAATCT 57.407 42.857 0.00 0.00 37.93 2.40
2294 4216 3.486383 TGTGGTCCTTTGTTGGAATCTC 58.514 45.455 0.00 0.00 37.93 2.75
2295 4217 3.138283 TGTGGTCCTTTGTTGGAATCTCT 59.862 43.478 0.00 0.00 37.93 3.10
2296 4218 4.349636 TGTGGTCCTTTGTTGGAATCTCTA 59.650 41.667 0.00 0.00 37.93 2.43
2297 4219 5.163141 TGTGGTCCTTTGTTGGAATCTCTAA 60.163 40.000 0.00 0.00 37.93 2.10
2298 4220 5.768164 GTGGTCCTTTGTTGGAATCTCTAAA 59.232 40.000 0.00 0.00 37.93 1.85
2299 4221 6.264518 GTGGTCCTTTGTTGGAATCTCTAAAA 59.735 38.462 0.00 0.00 37.93 1.52
2300 4222 6.836527 TGGTCCTTTGTTGGAATCTCTAAAAA 59.163 34.615 0.00 0.00 37.93 1.94
2301 4223 7.014230 TGGTCCTTTGTTGGAATCTCTAAAAAG 59.986 37.037 0.00 0.00 37.93 2.27
2302 4224 7.230712 GGTCCTTTGTTGGAATCTCTAAAAAGA 59.769 37.037 0.00 0.00 37.93 2.52
2303 4225 8.076781 GTCCTTTGTTGGAATCTCTAAAAAGAC 58.923 37.037 0.00 0.00 37.93 3.01
2304 4226 7.230712 TCCTTTGTTGGAATCTCTAAAAAGACC 59.769 37.037 0.00 0.00 32.39 3.85
2305 4227 7.231519 CCTTTGTTGGAATCTCTAAAAAGACCT 59.768 37.037 0.00 0.00 0.00 3.85
2306 4228 9.284968 CTTTGTTGGAATCTCTAAAAAGACCTA 57.715 33.333 0.00 0.00 0.00 3.08
2307 4229 9.807921 TTTGTTGGAATCTCTAAAAAGACCTAT 57.192 29.630 0.00 0.00 0.00 2.57
2322 4244 9.807921 AAAAAGACCTATATTTGGAAACAGAGA 57.192 29.630 2.01 0.00 44.54 3.10
2323 4245 9.454859 AAAAGACCTATATTTGGAAACAGAGAG 57.545 33.333 2.01 0.00 44.54 3.20
2324 4246 7.979786 AGACCTATATTTGGAAACAGAGAGA 57.020 36.000 2.01 0.00 44.54 3.10
2325 4247 8.017418 AGACCTATATTTGGAAACAGAGAGAG 57.983 38.462 2.01 0.00 44.54 3.20
2326 4248 7.621683 AGACCTATATTTGGAAACAGAGAGAGT 59.378 37.037 2.01 0.00 44.54 3.24
2327 4249 8.840200 ACCTATATTTGGAAACAGAGAGAGTA 57.160 34.615 2.01 0.00 44.54 2.59
2328 4250 8.919145 ACCTATATTTGGAAACAGAGAGAGTAG 58.081 37.037 2.01 0.00 44.54 2.57
2329 4251 9.137459 CCTATATTTGGAAACAGAGAGAGTAGA 57.863 37.037 0.00 0.00 44.54 2.59
2332 4254 9.829507 ATATTTGGAAACAGAGAGAGTAGATTG 57.170 33.333 0.00 0.00 44.54 2.67
2333 4255 6.672266 TTGGAAACAGAGAGAGTAGATTGT 57.328 37.500 0.00 0.00 44.54 2.71
2334 4256 7.776618 TTGGAAACAGAGAGAGTAGATTGTA 57.223 36.000 0.00 0.00 44.54 2.41
2335 4257 7.776618 TGGAAACAGAGAGAGTAGATTGTAA 57.223 36.000 0.00 0.00 35.01 2.41
2336 4258 8.367660 TGGAAACAGAGAGAGTAGATTGTAAT 57.632 34.615 0.00 0.00 35.01 1.89
2337 4259 8.816894 TGGAAACAGAGAGAGTAGATTGTAATT 58.183 33.333 0.00 0.00 35.01 1.40
2377 4299 6.481434 ACTAACATGTTATGTACTCCCTCC 57.519 41.667 18.35 0.00 44.07 4.30
2378 4300 4.402056 AACATGTTATGTACTCCCTCCG 57.598 45.455 9.97 0.00 44.07 4.63
2379 4301 3.371965 ACATGTTATGTACTCCCTCCGT 58.628 45.455 0.00 0.00 42.78 4.69
2380 4302 3.773119 ACATGTTATGTACTCCCTCCGTT 59.227 43.478 0.00 0.00 42.78 4.44
2381 4303 4.142004 ACATGTTATGTACTCCCTCCGTTC 60.142 45.833 0.00 0.00 42.78 3.95
2382 4304 3.433343 TGTTATGTACTCCCTCCGTTCA 58.567 45.455 0.00 0.00 0.00 3.18
2383 4305 3.446161 TGTTATGTACTCCCTCCGTTCAG 59.554 47.826 0.00 0.00 0.00 3.02
2384 4306 2.526888 ATGTACTCCCTCCGTTCAGA 57.473 50.000 0.00 0.00 0.00 3.27
2385 4307 2.297698 TGTACTCCCTCCGTTCAGAA 57.702 50.000 0.00 0.00 0.00 3.02
2386 4308 2.600790 TGTACTCCCTCCGTTCAGAAA 58.399 47.619 0.00 0.00 0.00 2.52
2387 4309 3.170717 TGTACTCCCTCCGTTCAGAAAT 58.829 45.455 0.00 0.00 0.00 2.17
2388 4310 4.346730 TGTACTCCCTCCGTTCAGAAATA 58.653 43.478 0.00 0.00 0.00 1.40
2389 4311 3.889520 ACTCCCTCCGTTCAGAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
2390 4312 3.442076 ACTCCCTCCGTTCAGAAATACT 58.558 45.455 0.00 0.00 0.00 2.12
2391 4313 3.838903 ACTCCCTCCGTTCAGAAATACTT 59.161 43.478 0.00 0.00 0.00 2.24
2392 4314 4.184629 CTCCCTCCGTTCAGAAATACTTG 58.815 47.826 0.00 0.00 0.00 3.16
2393 4315 3.581332 TCCCTCCGTTCAGAAATACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
2394 4316 3.933332 CCCTCCGTTCAGAAATACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
2395 4317 3.933332 CCTCCGTTCAGAAATACTTGTCC 59.067 47.826 0.00 0.00 0.00 4.02
2396 4318 4.322801 CCTCCGTTCAGAAATACTTGTCCT 60.323 45.833 0.00 0.00 0.00 3.85
2397 4319 5.105473 CCTCCGTTCAGAAATACTTGTCCTA 60.105 44.000 0.00 0.00 0.00 2.94
2398 4320 5.962433 TCCGTTCAGAAATACTTGTCCTAG 58.038 41.667 0.00 0.00 0.00 3.02
2399 4321 5.713389 TCCGTTCAGAAATACTTGTCCTAGA 59.287 40.000 0.00 0.00 0.00 2.43
2400 4322 6.209986 TCCGTTCAGAAATACTTGTCCTAGAA 59.790 38.462 0.00 0.00 0.00 2.10
2401 4323 6.872020 CCGTTCAGAAATACTTGTCCTAGAAA 59.128 38.462 0.00 0.00 0.00 2.52
2402 4324 7.549488 CCGTTCAGAAATACTTGTCCTAGAAAT 59.451 37.037 0.00 0.00 0.00 2.17
2403 4325 8.383619 CGTTCAGAAATACTTGTCCTAGAAATG 58.616 37.037 0.00 0.00 0.00 2.32
2404 4326 8.669243 GTTCAGAAATACTTGTCCTAGAAATGG 58.331 37.037 0.00 0.00 0.00 3.16
2405 4327 7.918076 TCAGAAATACTTGTCCTAGAAATGGT 58.082 34.615 0.00 0.00 0.00 3.55
2406 4328 8.383175 TCAGAAATACTTGTCCTAGAAATGGTT 58.617 33.333 0.00 0.00 0.00 3.67
2407 4329 8.454106 CAGAAATACTTGTCCTAGAAATGGTTG 58.546 37.037 0.00 0.00 0.00 3.77
2408 4330 8.383175 AGAAATACTTGTCCTAGAAATGGTTGA 58.617 33.333 0.00 0.00 0.00 3.18
2409 4331 8.934023 AAATACTTGTCCTAGAAATGGTTGAA 57.066 30.769 0.00 0.00 0.00 2.69
2410 4332 8.934023 AATACTTGTCCTAGAAATGGTTGAAA 57.066 30.769 0.00 0.00 0.00 2.69
2411 4333 8.934023 ATACTTGTCCTAGAAATGGTTGAAAA 57.066 30.769 0.00 0.00 0.00 2.29
2412 4334 7.839680 ACTTGTCCTAGAAATGGTTGAAAAT 57.160 32.000 0.00 0.00 0.00 1.82
2413 4335 7.661040 ACTTGTCCTAGAAATGGTTGAAAATG 58.339 34.615 0.00 0.00 0.00 2.32
2414 4336 6.588719 TGTCCTAGAAATGGTTGAAAATGG 57.411 37.500 0.00 0.00 0.00 3.16
2415 4337 6.310941 TGTCCTAGAAATGGTTGAAAATGGA 58.689 36.000 0.00 0.00 0.00 3.41
2416 4338 6.953520 TGTCCTAGAAATGGTTGAAAATGGAT 59.046 34.615 0.00 0.00 0.00 3.41
2417 4339 7.093814 TGTCCTAGAAATGGTTGAAAATGGATG 60.094 37.037 0.00 0.00 0.00 3.51
2418 4340 6.953520 TCCTAGAAATGGTTGAAAATGGATGT 59.046 34.615 0.00 0.00 0.00 3.06
2419 4341 8.112822 TCCTAGAAATGGTTGAAAATGGATGTA 58.887 33.333 0.00 0.00 0.00 2.29
2420 4342 8.917088 CCTAGAAATGGTTGAAAATGGATGTAT 58.083 33.333 0.00 0.00 0.00 2.29
2421 4343 9.956720 CTAGAAATGGTTGAAAATGGATGTATC 57.043 33.333 0.00 0.00 0.00 2.24
2465 4387 8.484214 AGATATAGTCATTTCTAGGACAAGCA 57.516 34.615 0.00 0.00 37.53 3.91
2466 4388 9.099071 AGATATAGTCATTTCTAGGACAAGCAT 57.901 33.333 0.00 0.00 37.53 3.79
2467 4389 9.717942 GATATAGTCATTTCTAGGACAAGCATT 57.282 33.333 0.00 0.00 37.53 3.56
2469 4391 6.749923 AGTCATTTCTAGGACAAGCATTTC 57.250 37.500 0.00 0.00 37.53 2.17
2470 4392 5.649831 AGTCATTTCTAGGACAAGCATTTCC 59.350 40.000 0.00 0.00 37.53 3.13
2471 4393 4.635765 TCATTTCTAGGACAAGCATTTCCG 59.364 41.667 0.00 0.00 36.95 4.30
2472 4394 2.691409 TCTAGGACAAGCATTTCCGG 57.309 50.000 0.00 0.00 36.95 5.14
2473 4395 2.184533 TCTAGGACAAGCATTTCCGGA 58.815 47.619 0.00 0.00 36.95 5.14
2474 4396 2.093658 TCTAGGACAAGCATTTCCGGAC 60.094 50.000 1.83 0.00 36.95 4.79
2475 4397 0.673644 AGGACAAGCATTTCCGGACG 60.674 55.000 1.83 0.00 36.95 4.79
2476 4398 1.644786 GGACAAGCATTTCCGGACGG 61.645 60.000 1.83 3.96 0.00 4.79
2477 4399 0.672401 GACAAGCATTTCCGGACGGA 60.672 55.000 1.83 9.76 43.52 4.69
2478 4400 0.673644 ACAAGCATTTCCGGACGGAG 60.674 55.000 13.64 3.92 46.06 4.63
2479 4401 1.078426 AAGCATTTCCGGACGGAGG 60.078 57.895 13.64 8.82 46.06 4.30
2480 4402 2.513897 GCATTTCCGGACGGAGGG 60.514 66.667 13.64 8.49 46.06 4.30
2481 4403 3.026431 GCATTTCCGGACGGAGGGA 62.026 63.158 13.64 4.95 46.06 4.20
2482 4404 1.144057 CATTTCCGGACGGAGGGAG 59.856 63.158 13.64 2.33 46.06 4.30
2483 4405 1.305887 ATTTCCGGACGGAGGGAGT 60.306 57.895 13.64 0.00 46.06 3.85
2484 4406 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2485 4407 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
2486 4408 2.044650 CCGGACGGAGGGAGTACA 60.045 66.667 4.40 0.00 37.50 2.90
2487 4409 1.455217 CCGGACGGAGGGAGTACAT 60.455 63.158 4.40 0.00 37.50 2.29
2488 4410 1.041447 CCGGACGGAGGGAGTACATT 61.041 60.000 4.40 0.00 37.50 2.71
2489 4411 0.822164 CGGACGGAGGGAGTACATTT 59.178 55.000 0.00 0.00 0.00 2.32
2490 4412 1.206371 CGGACGGAGGGAGTACATTTT 59.794 52.381 0.00 0.00 0.00 1.82
2491 4413 2.629051 GGACGGAGGGAGTACATTTTG 58.371 52.381 0.00 0.00 0.00 2.44
2492 4414 2.235402 GGACGGAGGGAGTACATTTTGA 59.765 50.000 0.00 0.00 0.00 2.69
2493 4415 3.307199 GGACGGAGGGAGTACATTTTGAA 60.307 47.826 0.00 0.00 0.00 2.69
2494 4416 4.320870 GACGGAGGGAGTACATTTTGAAA 58.679 43.478 0.00 0.00 0.00 2.69
2495 4417 4.721132 ACGGAGGGAGTACATTTTGAAAA 58.279 39.130 0.00 0.00 0.00 2.29
2496 4418 4.517832 ACGGAGGGAGTACATTTTGAAAAC 59.482 41.667 0.00 0.00 0.00 2.43
2497 4419 4.517453 CGGAGGGAGTACATTTTGAAAACA 59.483 41.667 0.00 0.00 0.00 2.83
2498 4420 5.334879 CGGAGGGAGTACATTTTGAAAACAG 60.335 44.000 0.00 0.00 0.00 3.16
2499 4421 5.768164 GGAGGGAGTACATTTTGAAAACAGA 59.232 40.000 0.00 0.00 0.00 3.41
2500 4422 6.264518 GGAGGGAGTACATTTTGAAAACAGAA 59.735 38.462 0.00 0.00 0.00 3.02
2501 4423 7.277174 AGGGAGTACATTTTGAAAACAGAAG 57.723 36.000 0.00 0.00 0.00 2.85
2502 4424 6.265422 AGGGAGTACATTTTGAAAACAGAAGG 59.735 38.462 0.00 0.00 0.00 3.46
2503 4425 6.040504 GGGAGTACATTTTGAAAACAGAAGGT 59.959 38.462 0.00 0.00 0.00 3.50
2504 4426 6.918022 GGAGTACATTTTGAAAACAGAAGGTG 59.082 38.462 0.00 0.00 0.00 4.00
2505 4427 7.201785 GGAGTACATTTTGAAAACAGAAGGTGA 60.202 37.037 0.00 0.00 0.00 4.02
2506 4428 7.480810 AGTACATTTTGAAAACAGAAGGTGAC 58.519 34.615 0.00 0.00 0.00 3.67
2507 4429 5.660460 ACATTTTGAAAACAGAAGGTGACC 58.340 37.500 0.00 0.00 0.00 4.02
2508 4430 4.729227 TTTTGAAAACAGAAGGTGACCC 57.271 40.909 0.00 0.00 0.00 4.46
2509 4431 1.961793 TGAAAACAGAAGGTGACCCG 58.038 50.000 0.00 0.00 35.12 5.28
2510 4432 1.210967 TGAAAACAGAAGGTGACCCGT 59.789 47.619 0.00 0.00 35.12 5.28
2511 4433 1.602377 GAAAACAGAAGGTGACCCGTG 59.398 52.381 0.00 0.00 35.12 4.94
2512 4434 0.834612 AAACAGAAGGTGACCCGTGA 59.165 50.000 0.00 0.00 35.12 4.35
2513 4435 0.834612 AACAGAAGGTGACCCGTGAA 59.165 50.000 0.00 0.00 35.12 3.18
2514 4436 0.393077 ACAGAAGGTGACCCGTGAAG 59.607 55.000 0.00 0.00 35.12 3.02
2515 4437 0.320771 CAGAAGGTGACCCGTGAAGG 60.321 60.000 0.00 0.00 40.63 3.46
2516 4438 0.763223 AGAAGGTGACCCGTGAAGGT 60.763 55.000 0.00 0.00 45.12 3.50
2517 4439 0.108019 GAAGGTGACCCGTGAAGGTT 59.892 55.000 0.00 0.00 41.42 3.50
2518 4440 1.345415 GAAGGTGACCCGTGAAGGTTA 59.655 52.381 0.00 0.00 41.42 2.85
2519 4441 1.652947 AGGTGACCCGTGAAGGTTAT 58.347 50.000 0.00 0.00 41.42 1.89
2520 4442 1.278127 AGGTGACCCGTGAAGGTTATG 59.722 52.381 0.00 0.00 41.42 1.90
2521 4443 1.084289 GTGACCCGTGAAGGTTATGC 58.916 55.000 0.00 0.00 41.42 3.14
2522 4444 0.390603 TGACCCGTGAAGGTTATGCG 60.391 55.000 0.00 0.00 41.42 4.73
2523 4445 0.108520 GACCCGTGAAGGTTATGCGA 60.109 55.000 0.00 0.00 41.42 5.10
2524 4446 0.322322 ACCCGTGAAGGTTATGCGAA 59.678 50.000 0.00 0.00 36.44 4.70
2525 4447 0.725117 CCCGTGAAGGTTATGCGAAC 59.275 55.000 0.00 0.00 38.74 3.95
2526 4448 1.434555 CCGTGAAGGTTATGCGAACA 58.565 50.000 3.96 0.00 34.51 3.18
2527 4449 2.006888 CCGTGAAGGTTATGCGAACAT 58.993 47.619 3.96 0.00 36.32 2.71
2528 4450 2.418628 CCGTGAAGGTTATGCGAACATT 59.581 45.455 1.35 1.35 34.81 2.71
2529 4451 3.416277 CGTGAAGGTTATGCGAACATTG 58.584 45.455 6.00 0.00 37.74 2.82
2530 4452 3.727673 CGTGAAGGTTATGCGAACATTGG 60.728 47.826 6.00 0.00 37.74 3.16
2531 4453 3.190535 GTGAAGGTTATGCGAACATTGGT 59.809 43.478 6.00 0.00 37.74 3.67
2532 4454 4.393680 GTGAAGGTTATGCGAACATTGGTA 59.606 41.667 6.00 0.00 37.74 3.25
2533 4455 4.634004 TGAAGGTTATGCGAACATTGGTAG 59.366 41.667 6.00 0.00 37.74 3.18
2534 4456 4.216411 AGGTTATGCGAACATTGGTAGT 57.784 40.909 3.96 0.00 37.74 2.73
2535 4457 5.347620 AGGTTATGCGAACATTGGTAGTA 57.652 39.130 3.96 0.00 37.74 1.82
2536 4458 5.736813 AGGTTATGCGAACATTGGTAGTAA 58.263 37.500 3.96 0.00 37.74 2.24
2537 4459 6.174760 AGGTTATGCGAACATTGGTAGTAAA 58.825 36.000 3.96 0.00 37.74 2.01
2538 4460 6.315393 AGGTTATGCGAACATTGGTAGTAAAG 59.685 38.462 3.96 0.00 37.74 1.85
2539 4461 6.314400 GGTTATGCGAACATTGGTAGTAAAGA 59.686 38.462 3.96 0.00 37.74 2.52
2540 4462 7.148373 GGTTATGCGAACATTGGTAGTAAAGAA 60.148 37.037 3.96 0.00 37.74 2.52
2541 4463 5.600908 TGCGAACATTGGTAGTAAAGAAC 57.399 39.130 0.00 0.00 0.00 3.01
2542 4464 4.453136 TGCGAACATTGGTAGTAAAGAACC 59.547 41.667 0.00 0.00 36.24 3.62
2543 4465 4.453136 GCGAACATTGGTAGTAAAGAACCA 59.547 41.667 0.00 0.00 43.99 3.67
2549 4471 3.731089 TGGTAGTAAAGAACCAACACCG 58.269 45.455 0.00 0.00 42.74 4.94
2550 4472 3.387374 TGGTAGTAAAGAACCAACACCGA 59.613 43.478 0.00 0.00 42.74 4.69
2551 4473 4.040706 TGGTAGTAAAGAACCAACACCGAT 59.959 41.667 0.00 0.00 42.74 4.18
2552 4474 5.245751 TGGTAGTAAAGAACCAACACCGATA 59.754 40.000 0.00 0.00 42.74 2.92
2553 4475 6.165577 GGTAGTAAAGAACCAACACCGATAA 58.834 40.000 0.00 0.00 35.73 1.75
2554 4476 6.650390 GGTAGTAAAGAACCAACACCGATAAA 59.350 38.462 0.00 0.00 35.73 1.40
2555 4477 7.335171 GGTAGTAAAGAACCAACACCGATAAAT 59.665 37.037 0.00 0.00 35.73 1.40
2556 4478 7.373778 AGTAAAGAACCAACACCGATAAATC 57.626 36.000 0.00 0.00 0.00 2.17
2557 4479 6.938030 AGTAAAGAACCAACACCGATAAATCA 59.062 34.615 0.00 0.00 0.00 2.57
2558 4480 5.880054 AAGAACCAACACCGATAAATCAG 57.120 39.130 0.00 0.00 0.00 2.90
2559 4481 5.160607 AGAACCAACACCGATAAATCAGA 57.839 39.130 0.00 0.00 0.00 3.27
2560 4482 5.556915 AGAACCAACACCGATAAATCAGAA 58.443 37.500 0.00 0.00 0.00 3.02
2561 4483 6.180472 AGAACCAACACCGATAAATCAGAAT 58.820 36.000 0.00 0.00 0.00 2.40
2562 4484 5.818136 ACCAACACCGATAAATCAGAATG 57.182 39.130 0.00 0.00 37.54 2.67
2563 4485 4.640201 ACCAACACCGATAAATCAGAATGG 59.360 41.667 0.00 0.00 36.16 3.16
2564 4486 4.881273 CCAACACCGATAAATCAGAATGGA 59.119 41.667 0.00 0.00 36.16 3.41
2565 4487 5.008019 CCAACACCGATAAATCAGAATGGAG 59.992 44.000 0.00 0.00 36.16 3.86
2566 4488 4.708177 ACACCGATAAATCAGAATGGAGG 58.292 43.478 0.00 0.00 36.16 4.30
2567 4489 3.499918 CACCGATAAATCAGAATGGAGGC 59.500 47.826 0.00 0.00 36.16 4.70
2568 4490 3.136443 ACCGATAAATCAGAATGGAGGCA 59.864 43.478 0.00 0.00 36.16 4.75
2569 4491 4.136796 CCGATAAATCAGAATGGAGGCAA 58.863 43.478 0.00 0.00 36.16 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.276138 CTATGGCAGTGTGTGTCCAGA 59.724 52.381 0.00 0.00 36.27 3.86
107 116 1.889545 AGAGCTTGAACTTCACAGGC 58.110 50.000 0.00 0.00 39.93 4.85
111 120 5.047660 TCCTCTTCTAGAGCTTGAACTTCAC 60.048 44.000 0.00 0.00 40.98 3.18
126 138 4.221703 CCTTGTCTCAAGCTTCCTCTTCTA 59.778 45.833 0.00 0.00 0.00 2.10
302 333 0.598065 GTCACCAAATGTCTGCCACC 59.402 55.000 0.00 0.00 0.00 4.61
308 339 1.056660 ACGGGAGTCACCAAATGTCT 58.943 50.000 0.00 0.00 40.62 3.41
400 1836 2.448453 ACTCCAAAACGGTTCACCAAA 58.552 42.857 0.00 0.00 35.57 3.28
413 1849 2.814097 GCAGACTTAGGGCAACTCCAAA 60.814 50.000 0.00 0.00 36.21 3.28
505 2005 4.083003 TCAGATTTGTATTCGGTTGTTGCC 60.083 41.667 0.00 0.00 0.00 4.52
593 2411 5.048013 CGACTATCATGGTACCAAGATGCTA 60.048 44.000 32.92 18.18 35.52 3.49
595 2413 3.990469 CGACTATCATGGTACCAAGATGC 59.010 47.826 32.92 22.85 35.52 3.91
704 2530 8.703378 TGATCACTATTCAGTAGTCAGATCAT 57.297 34.615 6.36 0.00 42.25 2.45
705 2531 8.703378 ATGATCACTATTCAGTAGTCAGATCA 57.297 34.615 10.83 10.83 46.21 2.92
723 2550 2.432146 TGCCCTGTGTCTCTATGATCAC 59.568 50.000 0.00 0.00 0.00 3.06
742 2569 3.123621 CGTAACTTGTCTCTCCATGTTGC 59.876 47.826 0.00 0.00 35.24 4.17
751 2582 4.051922 CAACTTCAGCGTAACTTGTCTCT 58.948 43.478 0.00 0.00 0.00 3.10
797 2628 9.413048 GAAGAGTAGGAATAACTATATGTGCAC 57.587 37.037 10.75 10.75 0.00 4.57
882 2720 3.839353 CTCTGGGGGATGATGCCGC 62.839 68.421 13.11 13.11 41.20 6.53
898 2737 3.368948 GGAGAACAAGATCCCAGACACTC 60.369 52.174 0.00 0.00 0.00 3.51
1065 2904 0.392706 TCACCATGATTATCGCCGCT 59.607 50.000 0.00 0.00 0.00 5.52
1131 2970 4.614967 AAATGAGGGAATGTGGGAGAAT 57.385 40.909 0.00 0.00 0.00 2.40
1179 3018 3.764237 ACGACCTCCACATGTAAGTTT 57.236 42.857 0.00 0.00 0.00 2.66
1186 3025 3.027170 GCGCAACGACCTCCACATG 62.027 63.158 0.30 0.00 0.00 3.21
1229 3070 0.167470 CACCACGAAGAAGCTGCATG 59.833 55.000 1.02 0.00 0.00 4.06
1386 3227 4.377760 TTCCTCCCGACCTCCGCT 62.378 66.667 0.00 0.00 36.84 5.52
1429 3270 3.260483 CACCTGCTCGCAGATCGC 61.260 66.667 19.78 0.23 46.30 4.58
1500 3341 3.312697 TGATGATGAGGAAGTAGACGACG 59.687 47.826 0.00 0.00 0.00 5.12
1647 3522 5.317733 AGAAATCACCGAACAACACAAAA 57.682 34.783 0.00 0.00 0.00 2.44
1660 3535 5.123820 TCGATCATGACCAAAAGAAATCACC 59.876 40.000 0.00 0.00 0.00 4.02
1668 3543 6.482641 AGAAGATGATCGATCATGACCAAAAG 59.517 38.462 38.50 0.00 46.84 2.27
1676 3551 9.205719 ACTAAATGAAGAAGATGATCGATCATG 57.794 33.333 38.50 23.19 46.84 3.07
1678 3553 8.637099 AGACTAAATGAAGAAGATGATCGATCA 58.363 33.333 29.09 29.09 41.70 2.92
1680 3555 8.637099 TGAGACTAAATGAAGAAGATGATCGAT 58.363 33.333 0.00 0.00 0.00 3.59
1736 3627 9.165014 CGAACAAAATATTTTCTTCTCGAACAA 57.835 29.630 20.00 0.00 0.00 2.83
1779 3671 9.695526 TCATTTCAAATCTTCAACACCAATAAG 57.304 29.630 0.00 0.00 0.00 1.73
1811 3704 7.540055 CCTTGCTCAAAAATATGAGTTCAAGAC 59.460 37.037 18.21 0.17 46.85 3.01
1839 3732 1.625315 TCCATGGACTGACACCTCTTG 59.375 52.381 11.44 0.00 0.00 3.02
1910 3815 3.553828 TTTCTTTTGAGGGTGACGTCT 57.446 42.857 17.92 0.00 45.35 4.18
1913 3818 3.630312 TCCTTTTTCTTTTGAGGGTGACG 59.370 43.478 0.00 0.00 0.00 4.35
1932 3837 3.188460 CGGACAACATCGTTGATTTTCCT 59.812 43.478 13.48 0.00 0.00 3.36
1933 3838 3.187637 TCGGACAACATCGTTGATTTTCC 59.812 43.478 13.48 8.58 0.00 3.13
2092 4014 4.424842 ACCAAATTGGAGATGCCCTTAAA 58.575 39.130 20.25 0.00 40.96 1.52
2168 4090 7.429340 CGCATGTTGTAGTCCATTTAAAATCTC 59.571 37.037 0.00 0.00 0.00 2.75
2175 4097 4.209307 TCCGCATGTTGTAGTCCATTTA 57.791 40.909 0.00 0.00 0.00 1.40
2181 4103 7.485277 GTCTATATACATCCGCATGTTGTAGTC 59.515 40.741 0.00 0.00 40.66 2.59
2244 4166 7.692460 AGCAAAATGAGTGAATCTATGTTCA 57.308 32.000 0.00 0.00 35.84 3.18
2245 4167 7.427606 CGAAGCAAAATGAGTGAATCTATGTTC 59.572 37.037 0.00 0.00 0.00 3.18
2246 4168 7.094634 ACGAAGCAAAATGAGTGAATCTATGTT 60.095 33.333 0.00 0.00 0.00 2.71
2247 4169 6.372659 ACGAAGCAAAATGAGTGAATCTATGT 59.627 34.615 0.00 0.00 0.00 2.29
2248 4170 6.779117 ACGAAGCAAAATGAGTGAATCTATG 58.221 36.000 0.00 0.00 0.00 2.23
2249 4171 6.992063 ACGAAGCAAAATGAGTGAATCTAT 57.008 33.333 0.00 0.00 0.00 1.98
2250 4172 6.204688 ACAACGAAGCAAAATGAGTGAATCTA 59.795 34.615 0.00 0.00 0.00 1.98
2251 4173 5.009010 ACAACGAAGCAAAATGAGTGAATCT 59.991 36.000 0.00 0.00 0.00 2.40
2252 4174 5.116074 CACAACGAAGCAAAATGAGTGAATC 59.884 40.000 0.00 0.00 0.00 2.52
2253 4175 4.977963 CACAACGAAGCAAAATGAGTGAAT 59.022 37.500 0.00 0.00 0.00 2.57
2254 4176 4.350346 CACAACGAAGCAAAATGAGTGAA 58.650 39.130 0.00 0.00 0.00 3.18
2255 4177 3.243035 CCACAACGAAGCAAAATGAGTGA 60.243 43.478 0.00 0.00 0.00 3.41
2256 4178 3.044986 CCACAACGAAGCAAAATGAGTG 58.955 45.455 0.00 0.00 0.00 3.51
2257 4179 2.687935 ACCACAACGAAGCAAAATGAGT 59.312 40.909 0.00 0.00 0.00 3.41
2258 4180 3.300009 GACCACAACGAAGCAAAATGAG 58.700 45.455 0.00 0.00 0.00 2.90
2259 4181 2.034053 GGACCACAACGAAGCAAAATGA 59.966 45.455 0.00 0.00 0.00 2.57
2260 4182 2.034558 AGGACCACAACGAAGCAAAATG 59.965 45.455 0.00 0.00 0.00 2.32
2261 4183 2.306847 AGGACCACAACGAAGCAAAAT 58.693 42.857 0.00 0.00 0.00 1.82
2262 4184 1.757682 AGGACCACAACGAAGCAAAA 58.242 45.000 0.00 0.00 0.00 2.44
2263 4185 1.757682 AAGGACCACAACGAAGCAAA 58.242 45.000 0.00 0.00 0.00 3.68
2264 4186 1.403679 CAAAGGACCACAACGAAGCAA 59.596 47.619 0.00 0.00 0.00 3.91
2265 4187 1.021202 CAAAGGACCACAACGAAGCA 58.979 50.000 0.00 0.00 0.00 3.91
2266 4188 1.021968 ACAAAGGACCACAACGAAGC 58.978 50.000 0.00 0.00 0.00 3.86
2267 4189 2.223479 CCAACAAAGGACCACAACGAAG 60.223 50.000 0.00 0.00 0.00 3.79
2268 4190 1.746220 CCAACAAAGGACCACAACGAA 59.254 47.619 0.00 0.00 0.00 3.85
2269 4191 1.065345 TCCAACAAAGGACCACAACGA 60.065 47.619 0.00 0.00 31.23 3.85
2270 4192 1.384525 TCCAACAAAGGACCACAACG 58.615 50.000 0.00 0.00 31.23 4.10
2271 4193 3.636764 AGATTCCAACAAAGGACCACAAC 59.363 43.478 0.00 0.00 37.42 3.32
2272 4194 3.888930 GAGATTCCAACAAAGGACCACAA 59.111 43.478 0.00 0.00 37.42 3.33
2273 4195 3.138283 AGAGATTCCAACAAAGGACCACA 59.862 43.478 0.00 0.00 37.42 4.17
2274 4196 3.756117 AGAGATTCCAACAAAGGACCAC 58.244 45.455 0.00 0.00 37.42 4.16
2275 4197 5.576563 TTAGAGATTCCAACAAAGGACCA 57.423 39.130 0.00 0.00 37.42 4.02
2276 4198 6.894339 TTTTAGAGATTCCAACAAAGGACC 57.106 37.500 0.00 0.00 37.42 4.46
2277 4199 8.076781 GTCTTTTTAGAGATTCCAACAAAGGAC 58.923 37.037 0.00 0.00 37.42 3.85
2278 4200 7.230712 GGTCTTTTTAGAGATTCCAACAAAGGA 59.769 37.037 0.00 0.00 35.41 3.36
2279 4201 7.231519 AGGTCTTTTTAGAGATTCCAACAAAGG 59.768 37.037 0.00 0.00 0.00 3.11
2280 4202 8.171164 AGGTCTTTTTAGAGATTCCAACAAAG 57.829 34.615 0.00 0.00 0.00 2.77
2281 4203 9.807921 ATAGGTCTTTTTAGAGATTCCAACAAA 57.192 29.630 0.00 0.00 0.00 2.83
2296 4218 9.807921 TCTCTGTTTCCAAATATAGGTCTTTTT 57.192 29.630 0.00 0.00 0.00 1.94
2297 4219 9.454859 CTCTCTGTTTCCAAATATAGGTCTTTT 57.545 33.333 0.00 0.00 0.00 2.27
2298 4220 8.826765 TCTCTCTGTTTCCAAATATAGGTCTTT 58.173 33.333 0.00 0.00 0.00 2.52
2299 4221 8.380742 TCTCTCTGTTTCCAAATATAGGTCTT 57.619 34.615 0.00 0.00 0.00 3.01
2300 4222 7.621683 ACTCTCTCTGTTTCCAAATATAGGTCT 59.378 37.037 0.00 0.00 0.00 3.85
2301 4223 7.787028 ACTCTCTCTGTTTCCAAATATAGGTC 58.213 38.462 0.00 0.00 0.00 3.85
2302 4224 7.741554 ACTCTCTCTGTTTCCAAATATAGGT 57.258 36.000 0.00 0.00 0.00 3.08
2303 4225 9.137459 TCTACTCTCTCTGTTTCCAAATATAGG 57.863 37.037 0.00 0.00 0.00 2.57
2306 4228 9.829507 CAATCTACTCTCTCTGTTTCCAAATAT 57.170 33.333 0.00 0.00 0.00 1.28
2307 4229 8.816894 ACAATCTACTCTCTCTGTTTCCAAATA 58.183 33.333 0.00 0.00 0.00 1.40
2308 4230 7.684529 ACAATCTACTCTCTCTGTTTCCAAAT 58.315 34.615 0.00 0.00 0.00 2.32
2309 4231 7.067496 ACAATCTACTCTCTCTGTTTCCAAA 57.933 36.000 0.00 0.00 0.00 3.28
2310 4232 6.672266 ACAATCTACTCTCTCTGTTTCCAA 57.328 37.500 0.00 0.00 0.00 3.53
2311 4233 7.776618 TTACAATCTACTCTCTCTGTTTCCA 57.223 36.000 0.00 0.00 0.00 3.53
2351 4273 8.648693 GGAGGGAGTACATAACATGTTAGTATT 58.351 37.037 22.03 18.41 41.63 1.89
2352 4274 7.039923 CGGAGGGAGTACATAACATGTTAGTAT 60.040 40.741 22.03 12.78 41.63 2.12
2353 4275 6.263842 CGGAGGGAGTACATAACATGTTAGTA 59.736 42.308 22.03 19.07 41.63 1.82
2354 4276 5.068723 CGGAGGGAGTACATAACATGTTAGT 59.931 44.000 22.03 19.90 41.63 2.24
2355 4277 5.068723 ACGGAGGGAGTACATAACATGTTAG 59.931 44.000 22.03 16.00 41.63 2.34
2356 4278 4.957954 ACGGAGGGAGTACATAACATGTTA 59.042 41.667 20.14 20.14 41.63 2.41
2357 4279 3.773119 ACGGAGGGAGTACATAACATGTT 59.227 43.478 16.68 16.68 41.63 2.71
2358 4280 3.371965 ACGGAGGGAGTACATAACATGT 58.628 45.455 0.00 0.00 46.92 3.21
2359 4281 4.142026 TGAACGGAGGGAGTACATAACATG 60.142 45.833 0.00 0.00 0.00 3.21
2360 4282 4.028131 TGAACGGAGGGAGTACATAACAT 58.972 43.478 0.00 0.00 0.00 2.71
2361 4283 3.433343 TGAACGGAGGGAGTACATAACA 58.567 45.455 0.00 0.00 0.00 2.41
2362 4284 3.698040 TCTGAACGGAGGGAGTACATAAC 59.302 47.826 0.00 0.00 0.00 1.89
2363 4285 3.972133 TCTGAACGGAGGGAGTACATAA 58.028 45.455 0.00 0.00 0.00 1.90
2364 4286 3.657398 TCTGAACGGAGGGAGTACATA 57.343 47.619 0.00 0.00 0.00 2.29
2365 4287 2.526888 TCTGAACGGAGGGAGTACAT 57.473 50.000 0.00 0.00 0.00 2.29
2366 4288 2.297698 TTCTGAACGGAGGGAGTACA 57.702 50.000 0.00 0.00 0.00 2.90
2367 4289 3.889520 ATTTCTGAACGGAGGGAGTAC 57.110 47.619 0.00 0.00 0.00 2.73
2368 4290 4.607239 AGTATTTCTGAACGGAGGGAGTA 58.393 43.478 0.00 0.00 0.00 2.59
2369 4291 3.442076 AGTATTTCTGAACGGAGGGAGT 58.558 45.455 0.00 0.00 0.00 3.85
2370 4292 4.184629 CAAGTATTTCTGAACGGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
2371 4293 3.581332 ACAAGTATTTCTGAACGGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
2372 4294 3.933332 GACAAGTATTTCTGAACGGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
2373 4295 3.933332 GGACAAGTATTTCTGAACGGAGG 59.067 47.826 0.00 0.00 0.00 4.30
2374 4296 4.822026 AGGACAAGTATTTCTGAACGGAG 58.178 43.478 0.00 0.00 0.00 4.63
2375 4297 4.884668 AGGACAAGTATTTCTGAACGGA 57.115 40.909 0.00 0.00 0.00 4.69
2376 4298 5.962433 TCTAGGACAAGTATTTCTGAACGG 58.038 41.667 0.00 0.00 0.00 4.44
2377 4299 7.884816 TTTCTAGGACAAGTATTTCTGAACG 57.115 36.000 0.00 0.00 0.00 3.95
2378 4300 8.669243 CCATTTCTAGGACAAGTATTTCTGAAC 58.331 37.037 0.00 0.00 0.00 3.18
2379 4301 8.383175 ACCATTTCTAGGACAAGTATTTCTGAA 58.617 33.333 0.00 0.00 0.00 3.02
2380 4302 7.918076 ACCATTTCTAGGACAAGTATTTCTGA 58.082 34.615 0.00 0.00 0.00 3.27
2381 4303 8.454106 CAACCATTTCTAGGACAAGTATTTCTG 58.546 37.037 0.00 0.00 0.00 3.02
2382 4304 8.383175 TCAACCATTTCTAGGACAAGTATTTCT 58.617 33.333 0.00 0.00 0.00 2.52
2383 4305 8.561738 TCAACCATTTCTAGGACAAGTATTTC 57.438 34.615 0.00 0.00 0.00 2.17
2384 4306 8.934023 TTCAACCATTTCTAGGACAAGTATTT 57.066 30.769 0.00 0.00 0.00 1.40
2385 4307 8.934023 TTTCAACCATTTCTAGGACAAGTATT 57.066 30.769 0.00 0.00 0.00 1.89
2386 4308 8.934023 TTTTCAACCATTTCTAGGACAAGTAT 57.066 30.769 0.00 0.00 0.00 2.12
2387 4309 8.792633 CATTTTCAACCATTTCTAGGACAAGTA 58.207 33.333 0.00 0.00 0.00 2.24
2388 4310 7.255942 CCATTTTCAACCATTTCTAGGACAAGT 60.256 37.037 0.00 0.00 0.00 3.16
2389 4311 7.039784 TCCATTTTCAACCATTTCTAGGACAAG 60.040 37.037 0.00 0.00 0.00 3.16
2390 4312 6.780031 TCCATTTTCAACCATTTCTAGGACAA 59.220 34.615 0.00 0.00 0.00 3.18
2391 4313 6.310941 TCCATTTTCAACCATTTCTAGGACA 58.689 36.000 0.00 0.00 0.00 4.02
2392 4314 6.834168 TCCATTTTCAACCATTTCTAGGAC 57.166 37.500 0.00 0.00 0.00 3.85
2393 4315 6.953520 ACATCCATTTTCAACCATTTCTAGGA 59.046 34.615 0.00 0.00 0.00 2.94
2394 4316 7.174107 ACATCCATTTTCAACCATTTCTAGG 57.826 36.000 0.00 0.00 0.00 3.02
2395 4317 9.956720 GATACATCCATTTTCAACCATTTCTAG 57.043 33.333 0.00 0.00 0.00 2.43
2396 4318 8.912988 GGATACATCCATTTTCAACCATTTCTA 58.087 33.333 3.26 0.00 46.38 2.10
2397 4319 7.785033 GGATACATCCATTTTCAACCATTTCT 58.215 34.615 3.26 0.00 46.38 2.52
2439 4361 9.588096 TGCTTGTCCTAGAAATGACTATATCTA 57.412 33.333 0.00 0.00 32.67 1.98
2440 4362 8.484214 TGCTTGTCCTAGAAATGACTATATCT 57.516 34.615 0.00 0.00 32.67 1.98
2441 4363 9.717942 AATGCTTGTCCTAGAAATGACTATATC 57.282 33.333 0.00 0.00 32.67 1.63
2443 4365 9.547753 GAAATGCTTGTCCTAGAAATGACTATA 57.452 33.333 0.00 0.00 32.67 1.31
2444 4366 7.500559 GGAAATGCTTGTCCTAGAAATGACTAT 59.499 37.037 1.42 0.00 32.67 2.12
2445 4367 6.823689 GGAAATGCTTGTCCTAGAAATGACTA 59.176 38.462 1.42 0.00 32.67 2.59
2446 4368 5.649831 GGAAATGCTTGTCCTAGAAATGACT 59.350 40.000 1.42 0.00 32.67 3.41
2447 4369 5.447818 CGGAAATGCTTGTCCTAGAAATGAC 60.448 44.000 7.20 0.00 0.00 3.06
2448 4370 4.635765 CGGAAATGCTTGTCCTAGAAATGA 59.364 41.667 7.20 0.00 0.00 2.57
2449 4371 4.201950 CCGGAAATGCTTGTCCTAGAAATG 60.202 45.833 0.00 0.00 0.00 2.32
2450 4372 3.947834 CCGGAAATGCTTGTCCTAGAAAT 59.052 43.478 0.00 0.00 0.00 2.17
2451 4373 3.008594 TCCGGAAATGCTTGTCCTAGAAA 59.991 43.478 0.00 0.00 0.00 2.52
2452 4374 2.569853 TCCGGAAATGCTTGTCCTAGAA 59.430 45.455 0.00 0.00 0.00 2.10
2453 4375 2.093658 GTCCGGAAATGCTTGTCCTAGA 60.094 50.000 5.23 1.53 0.00 2.43
2454 4376 2.280628 GTCCGGAAATGCTTGTCCTAG 58.719 52.381 5.23 0.00 0.00 3.02
2455 4377 1.404986 CGTCCGGAAATGCTTGTCCTA 60.405 52.381 5.23 0.00 0.00 2.94
2456 4378 0.673644 CGTCCGGAAATGCTTGTCCT 60.674 55.000 5.23 0.00 0.00 3.85
2457 4379 1.644786 CCGTCCGGAAATGCTTGTCC 61.645 60.000 5.23 0.00 37.50 4.02
2458 4380 0.672401 TCCGTCCGGAAATGCTTGTC 60.672 55.000 5.23 0.00 42.05 3.18
2459 4381 0.673644 CTCCGTCCGGAAATGCTTGT 60.674 55.000 5.23 0.00 44.66 3.16
2460 4382 1.369091 CCTCCGTCCGGAAATGCTTG 61.369 60.000 5.23 0.00 44.66 4.01
2461 4383 1.078426 CCTCCGTCCGGAAATGCTT 60.078 57.895 5.23 0.00 44.66 3.91
2462 4384 2.584608 CCTCCGTCCGGAAATGCT 59.415 61.111 5.23 0.00 44.66 3.79
2463 4385 2.513897 CCCTCCGTCCGGAAATGC 60.514 66.667 5.23 0.00 44.66 3.56
2464 4386 1.144057 CTCCCTCCGTCCGGAAATG 59.856 63.158 5.23 0.00 44.66 2.32
2465 4387 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2466 4388 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
2467 4389 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
2468 4390 1.929860 ATGTACTCCCTCCGTCCGGA 61.930 60.000 0.00 0.00 42.90 5.14
2469 4391 1.041447 AATGTACTCCCTCCGTCCGG 61.041 60.000 0.00 0.00 0.00 5.14
2470 4392 0.822164 AAATGTACTCCCTCCGTCCG 59.178 55.000 0.00 0.00 0.00 4.79
2471 4393 2.235402 TCAAAATGTACTCCCTCCGTCC 59.765 50.000 0.00 0.00 0.00 4.79
2472 4394 3.604875 TCAAAATGTACTCCCTCCGTC 57.395 47.619 0.00 0.00 0.00 4.79
2473 4395 4.360951 TTTCAAAATGTACTCCCTCCGT 57.639 40.909 0.00 0.00 0.00 4.69
2474 4396 4.517453 TGTTTTCAAAATGTACTCCCTCCG 59.483 41.667 0.00 0.00 0.00 4.63
2475 4397 5.768164 TCTGTTTTCAAAATGTACTCCCTCC 59.232 40.000 0.00 0.00 0.00 4.30
2476 4398 6.877611 TCTGTTTTCAAAATGTACTCCCTC 57.122 37.500 0.00 0.00 0.00 4.30
2477 4399 6.265422 CCTTCTGTTTTCAAAATGTACTCCCT 59.735 38.462 0.00 0.00 0.00 4.20
2478 4400 6.040504 ACCTTCTGTTTTCAAAATGTACTCCC 59.959 38.462 0.00 0.00 0.00 4.30
2479 4401 6.918022 CACCTTCTGTTTTCAAAATGTACTCC 59.082 38.462 0.00 0.00 0.00 3.85
2480 4402 7.644157 GTCACCTTCTGTTTTCAAAATGTACTC 59.356 37.037 0.00 0.00 0.00 2.59
2481 4403 7.416326 GGTCACCTTCTGTTTTCAAAATGTACT 60.416 37.037 0.00 0.00 0.00 2.73
2482 4404 6.695713 GGTCACCTTCTGTTTTCAAAATGTAC 59.304 38.462 0.00 0.00 0.00 2.90
2483 4405 6.183360 GGGTCACCTTCTGTTTTCAAAATGTA 60.183 38.462 0.00 0.00 0.00 2.29
2484 4406 5.395214 GGGTCACCTTCTGTTTTCAAAATGT 60.395 40.000 0.00 0.00 0.00 2.71
2485 4407 5.049828 GGGTCACCTTCTGTTTTCAAAATG 58.950 41.667 0.00 0.00 0.00 2.32
2486 4408 4.202111 CGGGTCACCTTCTGTTTTCAAAAT 60.202 41.667 0.00 0.00 33.28 1.82
2487 4409 3.129638 CGGGTCACCTTCTGTTTTCAAAA 59.870 43.478 0.00 0.00 33.28 2.44
2488 4410 2.685897 CGGGTCACCTTCTGTTTTCAAA 59.314 45.455 0.00 0.00 33.28 2.69
2489 4411 2.294074 CGGGTCACCTTCTGTTTTCAA 58.706 47.619 0.00 0.00 33.28 2.69
2490 4412 1.210967 ACGGGTCACCTTCTGTTTTCA 59.789 47.619 0.00 0.00 33.28 2.69
2491 4413 1.602377 CACGGGTCACCTTCTGTTTTC 59.398 52.381 0.00 0.00 33.28 2.29
2492 4414 1.210967 TCACGGGTCACCTTCTGTTTT 59.789 47.619 0.00 0.00 33.28 2.43
2493 4415 0.834612 TCACGGGTCACCTTCTGTTT 59.165 50.000 0.00 0.00 33.28 2.83
2494 4416 0.834612 TTCACGGGTCACCTTCTGTT 59.165 50.000 0.00 0.00 33.28 3.16
2495 4417 0.393077 CTTCACGGGTCACCTTCTGT 59.607 55.000 0.00 0.00 33.28 3.41
2496 4418 0.320771 CCTTCACGGGTCACCTTCTG 60.321 60.000 0.00 0.00 33.28 3.02
2497 4419 0.763223 ACCTTCACGGGTCACCTTCT 60.763 55.000 0.00 0.00 33.84 2.85
2498 4420 0.108019 AACCTTCACGGGTCACCTTC 59.892 55.000 0.00 0.00 38.87 3.46
2499 4421 1.426751 TAACCTTCACGGGTCACCTT 58.573 50.000 0.00 0.00 38.87 3.50
2500 4422 1.278127 CATAACCTTCACGGGTCACCT 59.722 52.381 0.00 0.00 38.87 4.00
2501 4423 1.734163 CATAACCTTCACGGGTCACC 58.266 55.000 0.00 0.00 38.87 4.02
2502 4424 1.084289 GCATAACCTTCACGGGTCAC 58.916 55.000 0.00 0.00 38.87 3.67
2503 4425 0.390603 CGCATAACCTTCACGGGTCA 60.391 55.000 0.00 0.00 38.87 4.02
2504 4426 0.108520 TCGCATAACCTTCACGGGTC 60.109 55.000 0.00 0.00 38.87 4.46
2505 4427 0.322322 TTCGCATAACCTTCACGGGT 59.678 50.000 0.00 0.00 42.05 5.28
2506 4428 0.725117 GTTCGCATAACCTTCACGGG 59.275 55.000 0.00 0.00 36.97 5.28
2507 4429 1.434555 TGTTCGCATAACCTTCACGG 58.565 50.000 0.00 0.00 39.35 4.94
2508 4430 3.416277 CAATGTTCGCATAACCTTCACG 58.584 45.455 0.00 0.00 36.70 4.35
2509 4431 3.190535 ACCAATGTTCGCATAACCTTCAC 59.809 43.478 0.00 0.00 36.70 3.18
2510 4432 3.417101 ACCAATGTTCGCATAACCTTCA 58.583 40.909 0.00 0.00 36.70 3.02
2511 4433 4.634443 ACTACCAATGTTCGCATAACCTTC 59.366 41.667 0.00 0.00 36.70 3.46
2512 4434 4.585879 ACTACCAATGTTCGCATAACCTT 58.414 39.130 0.00 0.00 36.70 3.50
2513 4435 4.216411 ACTACCAATGTTCGCATAACCT 57.784 40.909 0.00 0.00 36.70 3.50
2514 4436 6.314400 TCTTTACTACCAATGTTCGCATAACC 59.686 38.462 0.00 0.00 36.70 2.85
2515 4437 7.298507 TCTTTACTACCAATGTTCGCATAAC 57.701 36.000 0.00 0.00 36.70 1.89
2516 4438 7.148373 GGTTCTTTACTACCAATGTTCGCATAA 60.148 37.037 0.00 0.00 36.70 1.90
2517 4439 6.314400 GGTTCTTTACTACCAATGTTCGCATA 59.686 38.462 0.00 0.00 36.70 3.14
2518 4440 5.123344 GGTTCTTTACTACCAATGTTCGCAT 59.877 40.000 0.00 0.00 40.03 4.73
2519 4441 4.453136 GGTTCTTTACTACCAATGTTCGCA 59.547 41.667 0.00 0.00 34.48 5.10
2520 4442 4.453136 TGGTTCTTTACTACCAATGTTCGC 59.547 41.667 0.00 0.00 41.30 4.70
2521 4443 6.548441 TTGGTTCTTTACTACCAATGTTCG 57.452 37.500 2.74 0.00 46.55 3.95
2528 4450 3.387374 TCGGTGTTGGTTCTTTACTACCA 59.613 43.478 0.00 0.00 42.48 3.25
2529 4451 3.993920 TCGGTGTTGGTTCTTTACTACC 58.006 45.455 0.00 0.00 34.93 3.18
2530 4452 7.656707 TTTATCGGTGTTGGTTCTTTACTAC 57.343 36.000 0.00 0.00 0.00 2.73
2531 4453 8.095792 TGATTTATCGGTGTTGGTTCTTTACTA 58.904 33.333 0.00 0.00 0.00 1.82
2532 4454 6.938030 TGATTTATCGGTGTTGGTTCTTTACT 59.062 34.615 0.00 0.00 0.00 2.24
2533 4455 7.118680 TCTGATTTATCGGTGTTGGTTCTTTAC 59.881 37.037 0.00 0.00 34.76 2.01
2534 4456 7.162761 TCTGATTTATCGGTGTTGGTTCTTTA 58.837 34.615 0.00 0.00 34.76 1.85
2535 4457 6.001460 TCTGATTTATCGGTGTTGGTTCTTT 58.999 36.000 0.00 0.00 34.76 2.52
2536 4458 5.556915 TCTGATTTATCGGTGTTGGTTCTT 58.443 37.500 0.00 0.00 34.76 2.52
2537 4459 5.160607 TCTGATTTATCGGTGTTGGTTCT 57.839 39.130 0.00 0.00 34.76 3.01
2538 4460 5.873179 TTCTGATTTATCGGTGTTGGTTC 57.127 39.130 0.00 0.00 34.76 3.62
2539 4461 5.125417 CCATTCTGATTTATCGGTGTTGGTT 59.875 40.000 0.00 0.00 34.76 3.67
2540 4462 4.640201 CCATTCTGATTTATCGGTGTTGGT 59.360 41.667 0.00 0.00 34.76 3.67
2541 4463 4.881273 TCCATTCTGATTTATCGGTGTTGG 59.119 41.667 0.00 5.17 34.76 3.77
2542 4464 5.008019 CCTCCATTCTGATTTATCGGTGTTG 59.992 44.000 0.00 0.00 34.76 3.33
2543 4465 5.126067 CCTCCATTCTGATTTATCGGTGTT 58.874 41.667 0.00 0.00 34.76 3.32
2544 4466 4.708177 CCTCCATTCTGATTTATCGGTGT 58.292 43.478 0.00 0.00 34.76 4.16
2545 4467 3.499918 GCCTCCATTCTGATTTATCGGTG 59.500 47.826 0.00 0.00 34.76 4.94
2546 4468 3.136443 TGCCTCCATTCTGATTTATCGGT 59.864 43.478 0.00 0.00 34.76 4.69
2547 4469 3.743521 TGCCTCCATTCTGATTTATCGG 58.256 45.455 0.00 0.00 34.46 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.