Multiple sequence alignment - TraesCS7B01G030000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G030000 chr7B 100.000 3019 0 0 1 3019 28624894 28627912 0.000000e+00 5576.0
1 TraesCS7B01G030000 chr7D 93.373 2369 113 21 1 2352 81231999 81234340 0.000000e+00 3465.0
2 TraesCS7B01G030000 chr7D 94.980 976 31 6 653 1620 81648150 81649115 0.000000e+00 1515.0
3 TraesCS7B01G030000 chr7D 95.000 700 27 2 1 700 81647459 81648150 0.000000e+00 1092.0
4 TraesCS7B01G030000 chr7D 89.456 607 46 14 1757 2352 81371930 81371331 0.000000e+00 750.0
5 TraesCS7B01G030000 chr7D 89.326 534 41 12 1828 2352 81649404 81649930 0.000000e+00 656.0
6 TraesCS7B01G030000 chr7D 81.081 148 13 11 2635 2770 589315347 589315203 1.480000e-18 104.0
7 TraesCS7B01G030000 chr7D 97.297 37 1 0 220 256 601943306 601943270 2.510000e-06 63.9
8 TraesCS7B01G030000 chr7A 93.269 2273 113 18 1 2251 83720207 83722461 0.000000e+00 3314.0
9 TraesCS7B01G030000 chr7A 86.911 191 22 2 291 478 696540434 696540624 8.480000e-51 211.0
10 TraesCS7B01G030000 chr7A 79.518 249 34 14 2460 2699 83723037 83723277 8.660000e-36 161.0
11 TraesCS7B01G030000 chrUn 93.465 1423 77 12 939 2352 394551129 394552544 0.000000e+00 2098.0
12 TraesCS7B01G030000 chrUn 97.297 37 1 0 220 256 68112327 68112291 2.510000e-06 63.9
13 TraesCS7B01G030000 chrUn 97.297 37 1 0 220 256 87583501 87583537 2.510000e-06 63.9
14 TraesCS7B01G030000 chrUn 97.297 37 1 0 220 256 252735230 252735266 2.510000e-06 63.9
15 TraesCS7B01G030000 chr4A 86.893 412 40 8 334 740 725375657 725376059 1.650000e-122 449.0
16 TraesCS7B01G030000 chr2A 88.385 353 31 7 2427 2771 99793208 99792858 1.670000e-112 416.0
17 TraesCS7B01G030000 chr2A 87.571 354 32 10 2427 2771 100114979 100115329 1.690000e-107 399.0
18 TraesCS7B01G030000 chr2B 88.068 352 32 9 2428 2771 151908271 151907922 2.800000e-110 409.0
19 TraesCS7B01G030000 chr2B 88.068 352 32 6 2428 2771 152157860 152158209 2.800000e-110 409.0
20 TraesCS7B01G030000 chr2D 87.500 352 34 7 2428 2771 100190822 100190473 6.060000e-107 398.0
21 TraesCS7B01G030000 chr2D 87.500 352 34 7 2428 2771 100312149 100312498 6.060000e-107 398.0
22 TraesCS7B01G030000 chr3A 85.989 364 46 4 257 616 718339314 718338952 4.720000e-103 385.0
23 TraesCS7B01G030000 chr6A 97.297 37 1 0 220 256 211282455 211282491 2.510000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G030000 chr7B 28624894 28627912 3018 False 5576.000000 5576 100.0000 1 3019 1 chr7B.!!$F1 3018
1 TraesCS7B01G030000 chr7D 81231999 81234340 2341 False 3465.000000 3465 93.3730 1 2352 1 chr7D.!!$F1 2351
2 TraesCS7B01G030000 chr7D 81647459 81649930 2471 False 1087.666667 1515 93.1020 1 2352 3 chr7D.!!$F2 2351
3 TraesCS7B01G030000 chr7D 81371331 81371930 599 True 750.000000 750 89.4560 1757 2352 1 chr7D.!!$R1 595
4 TraesCS7B01G030000 chr7A 83720207 83723277 3070 False 1737.500000 3314 86.3935 1 2699 2 chr7A.!!$F2 2698
5 TraesCS7B01G030000 chrUn 394551129 394552544 1415 False 2098.000000 2098 93.4650 939 2352 1 chrUn.!!$F3 1413

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
133 139 0.322816 GGGCAGCTGAAATCTGGTGA 60.323 55.0 20.43 0.0 43.12 4.02 F
286 292 0.680061 GGAGTCCGAGACAACAGGTT 59.320 55.0 0.00 0.0 34.60 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1337 1403 1.063174 CTTGCCATTAGAGCAGCGAAC 59.937 52.381 0.0 0.0 42.17 3.95 R
2183 2334 1.070601 GCAAGGGCAAACTTCCAACAT 59.929 47.619 0.0 0.0 40.72 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.104630 CGTCAAGAGTCTCTACCCCC 58.895 60.000 1.88 0.00 0.00 5.40
72 73 1.277557 ACCTTGGCTGCTAGTCTCAAG 59.722 52.381 0.00 3.43 35.80 3.02
125 131 1.541147 CGATCTTTTGGGCAGCTGAAA 59.459 47.619 20.43 6.42 0.00 2.69
133 139 0.322816 GGGCAGCTGAAATCTGGTGA 60.323 55.000 20.43 0.00 43.12 4.02
144 150 3.708403 AATCTGGTGATGCAAGTCTGA 57.292 42.857 0.00 0.00 32.44 3.27
284 290 0.900647 AGGGAGTCCGAGACAACAGG 60.901 60.000 2.26 0.00 38.33 4.00
286 292 0.680061 GGAGTCCGAGACAACAGGTT 59.320 55.000 0.00 0.00 34.60 3.50
348 354 4.657824 CTTGGCGTCGACCGTGGT 62.658 66.667 10.58 0.00 39.32 4.16
491 500 2.324014 AAACGTCCTGCTGTCAGCCA 62.324 55.000 21.99 9.28 41.51 4.75
611 621 1.267574 TGGACCTGTGATCTCCCTGC 61.268 60.000 0.00 0.00 0.00 4.85
641 651 4.403752 GCTTATTTCTTTCCCTGCCTGAAT 59.596 41.667 0.00 0.00 0.00 2.57
689 746 4.148838 CTCTTATCTGTACTCTCCCAGGG 58.851 52.174 0.00 0.00 0.00 4.45
765 822 1.271379 CCCACCGGTGACTTCTCAAAT 60.271 52.381 36.07 0.00 0.00 2.32
851 910 5.419155 TCAGTGTCGATCTCACTTAATCCTT 59.581 40.000 14.76 0.00 43.14 3.36
912 978 1.670791 TCGTTCACAACCTTTCCCAC 58.329 50.000 0.00 0.00 0.00 4.61
930 996 2.614057 CCACGCAAAGAAGTCTGAAACT 59.386 45.455 0.00 0.00 41.10 2.66
994 1060 1.073284 TGCTTGGTTGACCCCTACTTC 59.927 52.381 0.00 0.00 34.29 3.01
1430 1496 3.249799 TCAGCATCGACAATTTCAAACGT 59.750 39.130 0.00 0.00 0.00 3.99
1439 1505 3.252458 ACAATTTCAAACGTGACCCTAGC 59.748 43.478 0.00 0.00 31.90 3.42
1646 1712 1.089481 CCGTCTGCATGCCGTACAAT 61.089 55.000 16.68 0.00 0.00 2.71
1649 1715 1.006086 TCTGCATGCCGTACAATTCG 58.994 50.000 16.68 0.00 0.00 3.34
1762 1828 0.950071 GCAAATGGCGGTGCACATTT 60.950 50.000 20.43 12.78 45.34 2.32
1805 1871 2.434185 CGCCACATGTACACCGCT 60.434 61.111 0.00 0.00 0.00 5.52
1982 2129 1.609555 CAGAGAGCCTACCCGTACATC 59.390 57.143 0.00 0.00 0.00 3.06
2003 2150 0.183492 AGCAGAACAAAGGTCTGGCA 59.817 50.000 13.39 0.00 32.55 4.92
2041 2188 1.272212 GAGGGATCTCATCTCCTTCGC 59.728 57.143 0.00 0.00 39.74 4.70
2061 2208 6.456795 TCGCAAGGAGATATATGTAGATGG 57.543 41.667 0.00 0.00 38.47 3.51
2067 2214 8.420222 CAAGGAGATATATGTAGATGGTCATCC 58.580 40.741 7.28 0.00 38.58 3.51
2093 2244 7.065085 CAGAAGACACAATAATAACAGACAGGG 59.935 40.741 0.00 0.00 0.00 4.45
2162 2313 3.904339 GGGAGGAGATAAGCAGATACCAA 59.096 47.826 0.00 0.00 0.00 3.67
2183 2334 6.770785 ACCAAGAAAAGATAGTTACAGCAACA 59.229 34.615 0.00 0.00 39.81 3.33
2189 2340 6.500684 AAGATAGTTACAGCAACATGTTGG 57.499 37.500 33.56 22.62 39.81 3.77
2195 2346 5.127031 AGTTACAGCAACATGTTGGAAGTTT 59.873 36.000 33.56 9.60 32.11 2.66
2202 2353 2.102925 ACATGTTGGAAGTTTGCCCTTG 59.897 45.455 0.00 0.00 0.00 3.61
2203 2354 0.463620 TGTTGGAAGTTTGCCCTTGC 59.536 50.000 0.00 0.00 33.80 4.01
2222 2373 6.238211 CCCTTGCTATTTTTCGTGTATGAGAG 60.238 42.308 0.00 0.00 0.00 3.20
2227 2378 7.147966 TGCTATTTTTCGTGTATGAGAGGAGTA 60.148 37.037 0.00 0.00 0.00 2.59
2239 2390 9.480861 TGTATGAGAGGAGTATAATTATGGGAG 57.519 37.037 8.28 0.00 0.00 4.30
2275 2902 9.661563 TTATGATGTACAATTCTCCGTTTTACT 57.338 29.630 0.00 0.00 0.00 2.24
2276 2903 7.359262 TGATGTACAATTCTCCGTTTTACTG 57.641 36.000 0.00 0.00 0.00 2.74
2277 2904 6.932400 TGATGTACAATTCTCCGTTTTACTGT 59.068 34.615 0.00 0.00 0.00 3.55
2278 2905 6.774354 TGTACAATTCTCCGTTTTACTGTC 57.226 37.500 0.00 0.00 0.00 3.51
2279 2906 4.985044 ACAATTCTCCGTTTTACTGTCG 57.015 40.909 0.00 0.00 0.00 4.35
2280 2907 4.374399 ACAATTCTCCGTTTTACTGTCGT 58.626 39.130 0.00 0.00 0.00 4.34
2281 2908 4.210537 ACAATTCTCCGTTTTACTGTCGTG 59.789 41.667 0.00 0.00 0.00 4.35
2282 2909 3.441496 TTCTCCGTTTTACTGTCGTGT 57.559 42.857 0.00 0.00 0.00 4.49
2283 2910 3.441496 TCTCCGTTTTACTGTCGTGTT 57.559 42.857 0.00 0.00 0.00 3.32
2284 2911 4.566545 TCTCCGTTTTACTGTCGTGTTA 57.433 40.909 0.00 0.00 0.00 2.41
2285 2912 4.930963 TCTCCGTTTTACTGTCGTGTTAA 58.069 39.130 0.00 0.00 0.00 2.01
2286 2913 5.347342 TCTCCGTTTTACTGTCGTGTTAAA 58.653 37.500 0.00 0.00 0.00 1.52
2296 2923 8.750626 TTACTGTCGTGTTAAATTAAACGTTG 57.249 30.769 0.00 10.81 37.32 4.10
2302 2929 6.142480 TCGTGTTAAATTAAACGTTGGCAATG 59.858 34.615 17.61 17.61 37.32 2.82
2303 2930 6.585852 GTGTTAAATTAAACGTTGGCAATGG 58.414 36.000 22.48 11.48 31.76 3.16
2322 2949 1.589716 GCTTGCCACTTCGCCTGAAT 61.590 55.000 0.00 0.00 32.61 2.57
2324 2951 2.083774 CTTGCCACTTCGCCTGAATAA 58.916 47.619 0.00 0.00 32.61 1.40
2339 2967 3.808728 TGAATAAGGAGCCAAATCGAGG 58.191 45.455 0.00 0.00 0.00 4.63
2352 2980 4.793216 CCAAATCGAGGAAATTGTAAAGCG 59.207 41.667 0.00 0.00 0.00 4.68
2354 2982 4.859629 ATCGAGGAAATTGTAAAGCGTC 57.140 40.909 0.00 0.00 0.00 5.19
2355 2983 3.655486 TCGAGGAAATTGTAAAGCGTCA 58.345 40.909 0.00 0.00 0.00 4.35
2356 2984 3.430895 TCGAGGAAATTGTAAAGCGTCAC 59.569 43.478 0.00 0.00 0.00 3.67
2357 2985 3.185594 CGAGGAAATTGTAAAGCGTCACA 59.814 43.478 0.00 0.00 0.00 3.58
2358 2986 4.319190 CGAGGAAATTGTAAAGCGTCACAA 60.319 41.667 0.00 0.00 38.89 3.33
2359 2987 5.616866 CGAGGAAATTGTAAAGCGTCACAAT 60.617 40.000 0.00 0.00 45.03 2.71
2360 2988 6.401688 CGAGGAAATTGTAAAGCGTCACAATA 60.402 38.462 1.31 0.00 42.93 1.90
2361 2989 7.391148 AGGAAATTGTAAAGCGTCACAATAT 57.609 32.000 1.31 0.00 42.93 1.28
2362 2990 8.500753 AGGAAATTGTAAAGCGTCACAATATA 57.499 30.769 1.31 0.00 42.93 0.86
2363 2991 9.120538 AGGAAATTGTAAAGCGTCACAATATAT 57.879 29.630 1.31 0.00 42.93 0.86
2370 2998 9.758651 TGTAAAGCGTCACAATATATATTCAGT 57.241 29.630 4.93 0.00 0.00 3.41
2373 3001 9.982651 AAAGCGTCACAATATATATTCAGTACT 57.017 29.630 4.93 0.00 0.00 2.73
2374 3002 9.627395 AAGCGTCACAATATATATTCAGTACTC 57.373 33.333 4.93 0.00 0.00 2.59
2375 3003 8.793592 AGCGTCACAATATATATTCAGTACTCA 58.206 33.333 4.93 0.00 0.00 3.41
2376 3004 9.574458 GCGTCACAATATATATTCAGTACTCAT 57.426 33.333 4.93 0.00 0.00 2.90
2391 3019 3.073274 ACTCATTTGTACTCCCAAGGC 57.927 47.619 0.00 0.00 0.00 4.35
2392 3020 2.375174 ACTCATTTGTACTCCCAAGGCA 59.625 45.455 0.00 0.00 0.00 4.75
2393 3021 3.010584 ACTCATTTGTACTCCCAAGGCAT 59.989 43.478 0.00 0.00 0.00 4.40
2394 3022 4.227300 ACTCATTTGTACTCCCAAGGCATA 59.773 41.667 0.00 0.00 0.00 3.14
2395 3023 5.103940 ACTCATTTGTACTCCCAAGGCATAT 60.104 40.000 0.00 0.00 0.00 1.78
2396 3024 6.101150 ACTCATTTGTACTCCCAAGGCATATA 59.899 38.462 0.00 0.00 0.00 0.86
2397 3025 6.905736 TCATTTGTACTCCCAAGGCATATAA 58.094 36.000 0.00 0.00 0.00 0.98
2398 3026 7.526041 TCATTTGTACTCCCAAGGCATATAAT 58.474 34.615 0.00 0.00 0.00 1.28
2399 3027 8.004215 TCATTTGTACTCCCAAGGCATATAATT 58.996 33.333 0.00 0.00 0.00 1.40
2400 3028 7.817418 TTTGTACTCCCAAGGCATATAATTC 57.183 36.000 0.00 0.00 0.00 2.17
2401 3029 6.508030 TGTACTCCCAAGGCATATAATTCA 57.492 37.500 0.00 0.00 0.00 2.57
2402 3030 6.296026 TGTACTCCCAAGGCATATAATTCAC 58.704 40.000 0.00 0.00 0.00 3.18
2403 3031 5.387113 ACTCCCAAGGCATATAATTCACA 57.613 39.130 0.00 0.00 0.00 3.58
2404 3032 5.957132 ACTCCCAAGGCATATAATTCACAT 58.043 37.500 0.00 0.00 0.00 3.21
2405 3033 6.376248 ACTCCCAAGGCATATAATTCACATT 58.624 36.000 0.00 0.00 0.00 2.71
2406 3034 6.840705 ACTCCCAAGGCATATAATTCACATTT 59.159 34.615 0.00 0.00 0.00 2.32
2407 3035 7.053316 TCCCAAGGCATATAATTCACATTTG 57.947 36.000 0.00 0.00 0.00 2.32
2408 3036 5.697633 CCCAAGGCATATAATTCACATTTGC 59.302 40.000 0.00 0.00 31.83 3.68
2409 3037 5.697633 CCAAGGCATATAATTCACATTTGCC 59.302 40.000 11.24 11.24 45.51 4.52
2412 3040 5.156355 GGCATATAATTCACATTTGCCTCG 58.844 41.667 11.70 0.00 43.29 4.63
2413 3041 5.278463 GGCATATAATTCACATTTGCCTCGT 60.278 40.000 11.70 0.00 43.29 4.18
2414 3042 6.208644 GCATATAATTCACATTTGCCTCGTT 58.791 36.000 0.00 0.00 0.00 3.85
2415 3043 6.697019 GCATATAATTCACATTTGCCTCGTTT 59.303 34.615 0.00 0.00 0.00 3.60
2416 3044 7.222611 GCATATAATTCACATTTGCCTCGTTTT 59.777 33.333 0.00 0.00 0.00 2.43
2417 3045 8.745837 CATATAATTCACATTTGCCTCGTTTTC 58.254 33.333 0.00 0.00 0.00 2.29
2418 3046 4.582701 ATTCACATTTGCCTCGTTTTCA 57.417 36.364 0.00 0.00 0.00 2.69
2419 3047 4.582701 TTCACATTTGCCTCGTTTTCAT 57.417 36.364 0.00 0.00 0.00 2.57
2420 3048 5.697473 TTCACATTTGCCTCGTTTTCATA 57.303 34.783 0.00 0.00 0.00 2.15
2421 3049 5.295431 TCACATTTGCCTCGTTTTCATAG 57.705 39.130 0.00 0.00 0.00 2.23
2422 3050 3.853671 CACATTTGCCTCGTTTTCATAGC 59.146 43.478 0.00 0.00 0.00 2.97
2423 3051 3.758554 ACATTTGCCTCGTTTTCATAGCT 59.241 39.130 0.00 0.00 0.00 3.32
2424 3052 4.941263 ACATTTGCCTCGTTTTCATAGCTA 59.059 37.500 0.00 0.00 0.00 3.32
2425 3053 4.939509 TTTGCCTCGTTTTCATAGCTAC 57.060 40.909 0.00 0.00 0.00 3.58
2426 3054 3.887621 TGCCTCGTTTTCATAGCTACT 57.112 42.857 0.00 0.00 0.00 2.57
2427 3055 4.202245 TGCCTCGTTTTCATAGCTACTT 57.798 40.909 0.00 0.00 0.00 2.24
2428 3056 5.333299 TGCCTCGTTTTCATAGCTACTTA 57.667 39.130 0.00 0.00 0.00 2.24
2429 3057 5.107133 TGCCTCGTTTTCATAGCTACTTAC 58.893 41.667 0.00 0.00 0.00 2.34
2430 3058 5.107133 GCCTCGTTTTCATAGCTACTTACA 58.893 41.667 0.00 0.00 0.00 2.41
2431 3059 5.579511 GCCTCGTTTTCATAGCTACTTACAA 59.420 40.000 0.00 0.00 0.00 2.41
2432 3060 6.237861 GCCTCGTTTTCATAGCTACTTACAAG 60.238 42.308 0.00 0.00 0.00 3.16
2433 3061 7.033791 CCTCGTTTTCATAGCTACTTACAAGA 58.966 38.462 0.00 0.00 0.00 3.02
2434 3062 7.544566 CCTCGTTTTCATAGCTACTTACAAGAA 59.455 37.037 0.00 0.00 0.00 2.52
2435 3063 8.462143 TCGTTTTCATAGCTACTTACAAGAAG 57.538 34.615 0.00 0.00 0.00 2.85
2436 3064 7.063074 TCGTTTTCATAGCTACTTACAAGAAGC 59.937 37.037 0.00 0.00 35.16 3.86
2437 3065 7.063544 CGTTTTCATAGCTACTTACAAGAAGCT 59.936 37.037 0.00 0.95 46.58 3.74
2438 3066 8.722394 GTTTTCATAGCTACTTACAAGAAGCTT 58.278 33.333 0.00 0.00 42.52 3.74
2439 3067 7.834068 TTCATAGCTACTTACAAGAAGCTTG 57.166 36.000 2.10 5.67 42.52 4.01
2440 3068 6.936279 TCATAGCTACTTACAAGAAGCTTGT 58.064 36.000 16.02 16.02 42.52 3.16
2441 3069 7.386851 TCATAGCTACTTACAAGAAGCTTGTT 58.613 34.615 16.82 2.27 42.52 2.83
2442 3070 5.931441 AGCTACTTACAAGAAGCTTGTTG 57.069 39.130 29.10 29.10 42.52 3.33
2443 3071 5.368989 AGCTACTTACAAGAAGCTTGTTGT 58.631 37.500 35.31 35.31 42.52 3.32
2444 3072 5.237344 AGCTACTTACAAGAAGCTTGTTGTG 59.763 40.000 38.18 28.62 43.42 3.33
2445 3073 5.236478 GCTACTTACAAGAAGCTTGTTGTGA 59.764 40.000 38.18 32.01 43.42 3.58
2446 3074 6.238374 GCTACTTACAAGAAGCTTGTTGTGAA 60.238 38.462 38.18 27.95 43.42 3.18
2447 3075 6.124088 ACTTACAAGAAGCTTGTTGTGAAG 57.876 37.500 38.18 33.57 43.42 3.02
2448 3076 5.066505 ACTTACAAGAAGCTTGTTGTGAAGG 59.933 40.000 38.18 26.71 43.42 3.46
2449 3077 3.620488 ACAAGAAGCTTGTTGTGAAGGA 58.380 40.909 33.71 0.00 42.23 3.36
2450 3078 3.378427 ACAAGAAGCTTGTTGTGAAGGAC 59.622 43.478 33.71 3.37 42.23 3.85
2451 3079 3.567478 AGAAGCTTGTTGTGAAGGACT 57.433 42.857 2.10 0.00 0.00 3.85
2452 3080 3.471680 AGAAGCTTGTTGTGAAGGACTC 58.528 45.455 2.10 0.00 0.00 3.36
2453 3081 3.135530 AGAAGCTTGTTGTGAAGGACTCT 59.864 43.478 2.10 0.00 0.00 3.24
2454 3082 3.567478 AGCTTGTTGTGAAGGACTCTT 57.433 42.857 0.00 0.00 35.62 2.85
2455 3083 3.209410 AGCTTGTTGTGAAGGACTCTTG 58.791 45.455 0.00 0.00 32.52 3.02
2456 3084 2.945668 GCTTGTTGTGAAGGACTCTTGT 59.054 45.455 0.00 0.00 32.52 3.16
2457 3085 3.378427 GCTTGTTGTGAAGGACTCTTGTT 59.622 43.478 0.00 0.00 32.52 2.83
2458 3086 4.574828 GCTTGTTGTGAAGGACTCTTGTTA 59.425 41.667 0.00 0.00 32.52 2.41
2465 3093 7.377766 TGTGAAGGACTCTTGTTATTAATGC 57.622 36.000 0.00 0.00 32.52 3.56
2473 3101 7.659390 GGACTCTTGTTATTAATGCTATCTGCT 59.341 37.037 0.00 0.00 43.37 4.24
2477 3105 9.440773 TCTTGTTATTAATGCTATCTGCTATGG 57.559 33.333 0.00 0.00 43.37 2.74
2481 3109 3.784511 AATGCTATCTGCTATGGTGCT 57.215 42.857 0.00 0.00 43.37 4.40
2485 3113 3.643320 TGCTATCTGCTATGGTGCTAAGT 59.357 43.478 0.00 0.00 43.37 2.24
2491 3119 6.233905 TCTGCTATGGTGCTAAGTTTATGA 57.766 37.500 0.00 0.00 0.00 2.15
2499 3127 5.045213 TGGTGCTAAGTTTATGATTCCTGGA 60.045 40.000 0.00 0.00 0.00 3.86
2501 3129 6.016777 GGTGCTAAGTTTATGATTCCTGGATG 60.017 42.308 0.00 0.00 0.00 3.51
2512 3140 1.750399 CCTGGATGGCTCCGGTTTG 60.750 63.158 0.00 0.00 45.32 2.93
2513 3141 1.299648 CTGGATGGCTCCGGTTTGA 59.700 57.895 0.00 0.00 45.37 2.69
2519 3147 0.690192 TGGCTCCGGTTTGAGAATGA 59.310 50.000 0.00 0.00 34.11 2.57
2522 3150 2.359900 GCTCCGGTTTGAGAATGACAT 58.640 47.619 0.00 0.00 34.11 3.06
2535 3163 4.676109 AGAATGACATTGATGTTGGGGAA 58.324 39.130 5.14 0.00 41.95 3.97
2536 3164 4.708421 AGAATGACATTGATGTTGGGGAAG 59.292 41.667 5.14 0.00 41.95 3.46
2537 3165 3.524095 TGACATTGATGTTGGGGAAGT 57.476 42.857 0.00 0.00 41.95 3.01
2538 3166 3.156293 TGACATTGATGTTGGGGAAGTG 58.844 45.455 0.00 0.00 41.95 3.16
2539 3167 2.493278 GACATTGATGTTGGGGAAGTGG 59.507 50.000 0.00 0.00 41.95 4.00
2540 3168 2.158325 ACATTGATGTTGGGGAAGTGGT 60.158 45.455 0.00 0.00 37.90 4.16
2541 3169 2.765689 TTGATGTTGGGGAAGTGGTT 57.234 45.000 0.00 0.00 0.00 3.67
2542 3170 1.993956 TGATGTTGGGGAAGTGGTTG 58.006 50.000 0.00 0.00 0.00 3.77
2543 3171 1.216678 TGATGTTGGGGAAGTGGTTGT 59.783 47.619 0.00 0.00 0.00 3.32
2544 3172 2.316108 GATGTTGGGGAAGTGGTTGTT 58.684 47.619 0.00 0.00 0.00 2.83
2545 3173 1.770294 TGTTGGGGAAGTGGTTGTTC 58.230 50.000 0.00 0.00 0.00 3.18
2547 3175 1.954382 GTTGGGGAAGTGGTTGTTCTC 59.046 52.381 0.00 0.00 0.00 2.87
2549 3177 1.780309 TGGGGAAGTGGTTGTTCTCAT 59.220 47.619 0.00 0.00 0.00 2.90
2550 3178 2.162681 GGGGAAGTGGTTGTTCTCATG 58.837 52.381 0.00 0.00 0.00 3.07
2551 3179 2.224769 GGGGAAGTGGTTGTTCTCATGA 60.225 50.000 0.00 0.00 0.00 3.07
2552 3180 2.814336 GGGAAGTGGTTGTTCTCATGAC 59.186 50.000 0.00 0.00 0.00 3.06
2553 3181 2.480419 GGAAGTGGTTGTTCTCATGACG 59.520 50.000 0.00 0.00 0.00 4.35
2554 3182 3.390135 GAAGTGGTTGTTCTCATGACGA 58.610 45.455 0.00 0.00 0.00 4.20
2555 3183 2.755650 AGTGGTTGTTCTCATGACGAC 58.244 47.619 0.00 0.00 0.00 4.34
2556 3184 1.798813 GTGGTTGTTCTCATGACGACC 59.201 52.381 13.30 13.30 0.00 4.79
2557 3185 1.414550 TGGTTGTTCTCATGACGACCA 59.585 47.619 17.29 17.29 33.62 4.02
2558 3186 2.158885 TGGTTGTTCTCATGACGACCAA 60.159 45.455 18.41 10.45 33.15 3.67
2560 3188 2.455674 TGTTCTCATGACGACCAAGG 57.544 50.000 0.00 0.00 0.00 3.61
2561 3189 1.001974 TGTTCTCATGACGACCAAGGG 59.998 52.381 0.00 0.00 0.00 3.95
2562 3190 0.613260 TTCTCATGACGACCAAGGGG 59.387 55.000 0.00 0.00 41.29 4.79
2563 3191 1.221840 CTCATGACGACCAAGGGGG 59.778 63.158 0.00 0.00 44.81 5.40
2564 3192 1.229368 TCATGACGACCAAGGGGGA 60.229 57.895 0.00 0.00 41.15 4.81
2565 3193 1.221840 CATGACGACCAAGGGGGAG 59.778 63.158 0.00 0.00 41.15 4.30
2566 3194 1.995626 ATGACGACCAAGGGGGAGG 60.996 63.158 0.00 0.00 41.15 4.30
2567 3195 2.606826 GACGACCAAGGGGGAGGT 60.607 66.667 0.00 0.00 41.83 3.85
2569 3197 2.606519 CGACCAAGGGGGAGGTGA 60.607 66.667 0.00 0.00 38.50 4.02
2571 3199 1.562672 CGACCAAGGGGGAGGTGATT 61.563 60.000 0.00 0.00 38.50 2.57
2572 3200 0.034089 GACCAAGGGGGAGGTGATTG 60.034 60.000 0.00 0.00 38.50 2.67
2573 3201 1.380380 CCAAGGGGGAGGTGATTGC 60.380 63.158 0.00 0.00 40.01 3.56
2595 3223 1.788229 TTGGTATCGCTGAGATCCCA 58.212 50.000 1.65 1.65 42.69 4.37
2615 3243 0.608130 ACTGCTGTTATGGCGACTGA 59.392 50.000 0.00 0.00 0.00 3.41
2648 3276 0.107945 GCAGCGAAGATCAAGAGGGT 60.108 55.000 0.00 0.00 0.00 4.34
2657 3285 1.839994 GATCAAGAGGGTGGTCATGGA 59.160 52.381 0.00 0.00 0.00 3.41
2663 3291 0.911525 AGGGTGGTCATGGACAGAGG 60.912 60.000 0.00 0.00 33.68 3.69
2664 3292 1.078143 GGTGGTCATGGACAGAGGC 60.078 63.158 0.00 0.00 33.68 4.70
2666 3294 0.674895 GTGGTCATGGACAGAGGCAC 60.675 60.000 0.00 0.00 33.68 5.01
2668 3296 0.254178 GGTCATGGACAGAGGCACAT 59.746 55.000 0.00 0.00 33.68 3.21
2671 3299 1.486310 TCATGGACAGAGGCACATACC 59.514 52.381 0.00 0.00 0.00 2.73
2674 3308 0.179000 GGACAGAGGCACATACCAGG 59.821 60.000 0.00 0.00 0.00 4.45
2677 3311 1.985159 ACAGAGGCACATACCAGGAAA 59.015 47.619 0.00 0.00 0.00 3.13
2689 3323 2.309136 CCAGGAAATGGGAACTTGGT 57.691 50.000 0.00 0.00 46.36 3.67
2699 3333 1.966451 GAACTTGGTCCGGTGGCAG 60.966 63.158 0.00 0.00 0.00 4.85
2700 3334 4.643387 ACTTGGTCCGGTGGCAGC 62.643 66.667 6.62 6.62 0.00 5.25
2709 3343 3.423154 GGTGGCAGCGTCCGAAAG 61.423 66.667 0.00 0.00 0.00 2.62
2710 3344 2.357034 GTGGCAGCGTCCGAAAGA 60.357 61.111 0.00 0.00 0.00 2.52
2711 3345 1.741770 GTGGCAGCGTCCGAAAGAT 60.742 57.895 0.00 0.00 0.00 2.40
2712 3346 1.741401 TGGCAGCGTCCGAAAGATG 60.741 57.895 0.00 0.00 34.31 2.90
2713 3347 1.447838 GGCAGCGTCCGAAAGATGA 60.448 57.895 0.00 0.00 32.76 2.92
2714 3348 0.811616 GGCAGCGTCCGAAAGATGAT 60.812 55.000 0.00 0.00 32.76 2.45
2717 3351 2.672961 AGCGTCCGAAAGATGATGAA 57.327 45.000 0.00 0.00 32.76 2.57
2718 3352 2.271800 AGCGTCCGAAAGATGATGAAC 58.728 47.619 0.00 0.00 32.76 3.18
2719 3353 1.005975 GCGTCCGAAAGATGATGAACG 60.006 52.381 0.00 0.00 32.76 3.95
2720 3354 2.526077 CGTCCGAAAGATGATGAACGA 58.474 47.619 0.00 0.00 32.76 3.85
2721 3355 2.531912 CGTCCGAAAGATGATGAACGAG 59.468 50.000 0.00 0.00 32.76 4.18
2722 3356 2.860735 GTCCGAAAGATGATGAACGAGG 59.139 50.000 0.00 0.00 0.00 4.63
2723 3357 2.159099 TCCGAAAGATGATGAACGAGGG 60.159 50.000 0.00 0.00 0.00 4.30
2724 3358 1.594862 CGAAAGATGATGAACGAGGGC 59.405 52.381 0.00 0.00 0.00 5.19
2725 3359 2.739932 CGAAAGATGATGAACGAGGGCT 60.740 50.000 0.00 0.00 0.00 5.19
2726 3360 2.611225 AAGATGATGAACGAGGGCTC 57.389 50.000 0.00 0.00 0.00 4.70
2727 3361 0.755686 AGATGATGAACGAGGGCTCC 59.244 55.000 0.00 0.00 0.00 4.70
2728 3362 0.755686 GATGATGAACGAGGGCTCCT 59.244 55.000 0.00 0.00 36.03 3.69
2729 3363 1.139853 GATGATGAACGAGGGCTCCTT 59.860 52.381 0.00 0.00 31.76 3.36
2730 3364 0.250234 TGATGAACGAGGGCTCCTTG 59.750 55.000 6.87 6.87 40.74 3.61
2731 3365 0.537188 GATGAACGAGGGCTCCTTGA 59.463 55.000 13.69 0.00 37.20 3.02
2732 3366 1.139853 GATGAACGAGGGCTCCTTGAT 59.860 52.381 13.69 3.73 37.20 2.57
2733 3367 1.860641 TGAACGAGGGCTCCTTGATA 58.139 50.000 13.69 0.00 37.20 2.15
2734 3368 2.184533 TGAACGAGGGCTCCTTGATAA 58.815 47.619 13.69 0.00 37.20 1.75
2735 3369 2.168521 TGAACGAGGGCTCCTTGATAAG 59.831 50.000 13.69 0.00 37.20 1.73
2736 3370 0.466124 ACGAGGGCTCCTTGATAAGC 59.534 55.000 13.69 0.00 37.20 3.09
2737 3371 0.465705 CGAGGGCTCCTTGATAAGCA 59.534 55.000 3.02 0.00 40.36 3.91
2738 3372 1.071385 CGAGGGCTCCTTGATAAGCAT 59.929 52.381 3.02 0.00 40.36 3.79
2739 3373 2.502295 GAGGGCTCCTTGATAAGCATG 58.498 52.381 0.00 0.00 40.36 4.06
2740 3374 1.144503 AGGGCTCCTTGATAAGCATGG 59.855 52.381 0.00 0.00 41.86 3.66
2741 3375 1.613836 GGCTCCTTGATAAGCATGGG 58.386 55.000 0.00 0.00 41.08 4.00
2742 3376 1.143684 GGCTCCTTGATAAGCATGGGA 59.856 52.381 0.00 0.00 41.08 4.37
2743 3377 2.423373 GGCTCCTTGATAAGCATGGGAA 60.423 50.000 0.00 0.00 41.08 3.97
2744 3378 3.290710 GCTCCTTGATAAGCATGGGAAA 58.709 45.455 0.00 0.00 41.08 3.13
2745 3379 3.067320 GCTCCTTGATAAGCATGGGAAAC 59.933 47.826 0.00 0.00 41.08 2.78
2746 3380 5.999167 GCTCCTTGATAAGCATGGGAAACC 61.999 50.000 0.00 0.00 44.27 3.27
2760 3394 2.505405 GGAAACCAACTGAGAAGACCC 58.495 52.381 0.00 0.00 0.00 4.46
2761 3395 2.505405 GAAACCAACTGAGAAGACCCC 58.495 52.381 0.00 0.00 0.00 4.95
2762 3396 1.518367 AACCAACTGAGAAGACCCCA 58.482 50.000 0.00 0.00 0.00 4.96
2763 3397 1.059913 ACCAACTGAGAAGACCCCAG 58.940 55.000 0.00 0.00 0.00 4.45
2764 3398 0.322008 CCAACTGAGAAGACCCCAGC 60.322 60.000 0.00 0.00 0.00 4.85
2765 3399 0.689623 CAACTGAGAAGACCCCAGCT 59.310 55.000 0.00 0.00 0.00 4.24
2766 3400 0.689623 AACTGAGAAGACCCCAGCTG 59.310 55.000 6.78 6.78 0.00 4.24
2767 3401 0.178921 ACTGAGAAGACCCCAGCTGA 60.179 55.000 17.39 0.00 0.00 4.26
2768 3402 0.536260 CTGAGAAGACCCCAGCTGAG 59.464 60.000 17.39 8.86 0.00 3.35
2769 3403 0.178921 TGAGAAGACCCCAGCTGAGT 60.179 55.000 17.39 12.50 0.00 3.41
2770 3404 0.248843 GAGAAGACCCCAGCTGAGTG 59.751 60.000 17.39 5.37 0.00 3.51
2771 3405 0.178921 AGAAGACCCCAGCTGAGTGA 60.179 55.000 17.39 0.00 0.00 3.41
2772 3406 0.687354 GAAGACCCCAGCTGAGTGAA 59.313 55.000 17.39 0.00 0.00 3.18
2773 3407 1.280421 GAAGACCCCAGCTGAGTGAAT 59.720 52.381 17.39 0.00 0.00 2.57
2774 3408 2.254152 AGACCCCAGCTGAGTGAATA 57.746 50.000 17.39 0.00 0.00 1.75
2775 3409 2.769209 AGACCCCAGCTGAGTGAATAT 58.231 47.619 17.39 0.00 0.00 1.28
2776 3410 3.118531 AGACCCCAGCTGAGTGAATATT 58.881 45.455 17.39 0.00 0.00 1.28
2777 3411 3.135530 AGACCCCAGCTGAGTGAATATTC 59.864 47.826 17.39 8.60 0.00 1.75
2778 3412 2.846206 ACCCCAGCTGAGTGAATATTCA 59.154 45.455 17.39 14.23 34.20 2.57
2779 3413 3.266772 ACCCCAGCTGAGTGAATATTCAA 59.733 43.478 19.55 4.03 39.21 2.69
2780 3414 4.079558 ACCCCAGCTGAGTGAATATTCAAT 60.080 41.667 19.55 18.63 39.21 2.57
2787 3421 4.999751 GAGTGAATATTCAATCCCGAGC 57.000 45.455 27.60 11.29 44.09 5.03
2788 3422 3.744660 AGTGAATATTCAATCCCGAGCC 58.255 45.455 19.55 4.47 39.21 4.70
2789 3423 3.392616 AGTGAATATTCAATCCCGAGCCT 59.607 43.478 19.55 6.66 39.21 4.58
2790 3424 4.593206 AGTGAATATTCAATCCCGAGCCTA 59.407 41.667 19.55 0.00 39.21 3.93
2791 3425 5.071788 AGTGAATATTCAATCCCGAGCCTAA 59.928 40.000 19.55 0.00 39.21 2.69
2792 3426 5.409826 GTGAATATTCAATCCCGAGCCTAAG 59.590 44.000 19.55 0.00 39.21 2.18
2793 3427 2.938956 ATTCAATCCCGAGCCTAAGG 57.061 50.000 0.00 0.00 0.00 2.69
2794 3428 8.919721 TGAATATTCAATCCCGAGCCTAAGGC 62.920 46.154 15.82 0.00 40.95 4.35
2804 3438 2.700329 GCCTAAGGCTCATCTGCAC 58.300 57.895 0.00 0.00 46.69 4.57
2805 3439 0.817229 GCCTAAGGCTCATCTGCACC 60.817 60.000 0.00 0.00 46.69 5.01
2806 3440 0.179034 CCTAAGGCTCATCTGCACCC 60.179 60.000 0.00 0.00 34.04 4.61
2807 3441 0.531532 CTAAGGCTCATCTGCACCCG 60.532 60.000 0.00 0.00 34.04 5.28
2808 3442 1.971505 TAAGGCTCATCTGCACCCGG 61.972 60.000 0.00 0.00 34.04 5.73
2809 3443 4.101448 GGCTCATCTGCACCCGGT 62.101 66.667 0.00 0.00 34.04 5.28
2810 3444 2.821366 GCTCATCTGCACCCGGTG 60.821 66.667 13.71 13.71 36.51 4.94
2811 3445 2.981302 CTCATCTGCACCCGGTGA 59.019 61.111 22.37 5.69 35.23 4.02
2812 3446 1.296392 CTCATCTGCACCCGGTGAA 59.704 57.895 22.37 10.33 35.23 3.18
2813 3447 1.003839 TCATCTGCACCCGGTGAAC 60.004 57.895 22.37 4.97 35.23 3.18
2814 3448 1.302431 CATCTGCACCCGGTGAACA 60.302 57.895 22.37 9.57 35.23 3.18
2815 3449 1.003355 ATCTGCACCCGGTGAACAG 60.003 57.895 22.37 18.37 35.23 3.16
2816 3450 1.480212 ATCTGCACCCGGTGAACAGA 61.480 55.000 22.37 22.57 37.19 3.41
2817 3451 1.227823 CTGCACCCGGTGAACAGAA 60.228 57.895 22.37 0.00 35.23 3.02
2818 3452 0.606401 CTGCACCCGGTGAACAGAAT 60.606 55.000 22.37 0.00 35.23 2.40
2819 3453 0.179004 TGCACCCGGTGAACAGAATT 60.179 50.000 22.37 0.00 35.23 2.17
2820 3454 0.521735 GCACCCGGTGAACAGAATTC 59.478 55.000 22.37 0.00 35.23 2.17
2821 3455 1.890876 CACCCGGTGAACAGAATTCA 58.109 50.000 12.68 0.00 35.23 2.57
2822 3456 2.436417 CACCCGGTGAACAGAATTCAT 58.564 47.619 12.68 0.00 35.23 2.57
2823 3457 2.162208 CACCCGGTGAACAGAATTCATG 59.838 50.000 12.68 5.85 35.23 3.07
2824 3458 1.745087 CCCGGTGAACAGAATTCATGG 59.255 52.381 8.44 0.00 0.00 3.66
2825 3459 1.133025 CCGGTGAACAGAATTCATGGC 59.867 52.381 8.44 1.71 0.00 4.40
2826 3460 1.811965 CGGTGAACAGAATTCATGGCA 59.188 47.619 8.44 0.00 0.00 4.92
2827 3461 2.228582 CGGTGAACAGAATTCATGGCAA 59.771 45.455 8.44 0.00 0.00 4.52
2828 3462 3.305267 CGGTGAACAGAATTCATGGCAAA 60.305 43.478 8.44 0.00 0.00 3.68
2829 3463 4.630111 GGTGAACAGAATTCATGGCAAAA 58.370 39.130 8.44 0.00 0.00 2.44
2830 3464 5.055812 GGTGAACAGAATTCATGGCAAAAA 58.944 37.500 8.44 0.00 0.00 1.94
2831 3465 5.702209 GGTGAACAGAATTCATGGCAAAAAT 59.298 36.000 8.44 0.00 0.00 1.82
2832 3466 6.347888 GGTGAACAGAATTCATGGCAAAAATG 60.348 38.462 8.44 0.00 0.00 2.32
2833 3467 6.424509 GTGAACAGAATTCATGGCAAAAATGA 59.575 34.615 8.44 0.00 32.24 2.57
2834 3468 6.424509 TGAACAGAATTCATGGCAAAAATGAC 59.575 34.615 8.44 0.00 33.84 3.06
2835 3469 5.856156 ACAGAATTCATGGCAAAAATGACA 58.144 33.333 8.44 0.00 33.84 3.58
2836 3470 6.289834 ACAGAATTCATGGCAAAAATGACAA 58.710 32.000 8.44 0.00 33.84 3.18
2837 3471 6.766944 ACAGAATTCATGGCAAAAATGACAAA 59.233 30.769 8.44 0.00 33.84 2.83
2838 3472 7.282675 ACAGAATTCATGGCAAAAATGACAAAA 59.717 29.630 8.44 0.00 33.84 2.44
2839 3473 8.293867 CAGAATTCATGGCAAAAATGACAAAAT 58.706 29.630 8.44 0.00 33.84 1.82
2840 3474 8.508875 AGAATTCATGGCAAAAATGACAAAATC 58.491 29.630 8.44 0.00 33.84 2.17
2841 3475 6.557291 TTCATGGCAAAAATGACAAAATCC 57.443 33.333 0.00 0.00 33.84 3.01
2842 3476 4.689812 TCATGGCAAAAATGACAAAATCCG 59.310 37.500 0.00 0.00 0.00 4.18
2843 3477 3.397482 TGGCAAAAATGACAAAATCCGG 58.603 40.909 0.00 0.00 0.00 5.14
2844 3478 2.159430 GGCAAAAATGACAAAATCCGGC 59.841 45.455 0.00 0.00 0.00 6.13
2845 3479 2.159430 GCAAAAATGACAAAATCCGGCC 59.841 45.455 0.00 0.00 0.00 6.13
2846 3480 3.663025 CAAAAATGACAAAATCCGGCCT 58.337 40.909 0.00 0.00 0.00 5.19
2847 3481 3.317603 AAAATGACAAAATCCGGCCTG 57.682 42.857 0.00 0.00 0.00 4.85
2848 3482 2.214376 AATGACAAAATCCGGCCTGA 57.786 45.000 0.00 0.00 0.00 3.86
2849 3483 2.214376 ATGACAAAATCCGGCCTGAA 57.786 45.000 0.00 0.00 0.00 3.02
2850 3484 1.243902 TGACAAAATCCGGCCTGAAC 58.756 50.000 0.00 0.00 0.00 3.18
2851 3485 1.243902 GACAAAATCCGGCCTGAACA 58.756 50.000 0.00 0.00 0.00 3.18
2852 3486 1.200020 GACAAAATCCGGCCTGAACAG 59.800 52.381 0.00 0.00 0.00 3.16
2853 3487 1.247567 CAAAATCCGGCCTGAACAGT 58.752 50.000 0.00 0.00 0.00 3.55
2854 3488 2.224670 ACAAAATCCGGCCTGAACAGTA 60.225 45.455 0.00 0.00 0.00 2.74
2855 3489 3.016736 CAAAATCCGGCCTGAACAGTAT 58.983 45.455 0.00 0.00 0.00 2.12
2856 3490 2.332063 AATCCGGCCTGAACAGTATG 57.668 50.000 0.00 0.00 46.00 2.39
2857 3491 0.179045 ATCCGGCCTGAACAGTATGC 60.179 55.000 0.00 0.00 42.53 3.14
2858 3492 1.078497 CCGGCCTGAACAGTATGCA 60.078 57.895 0.00 0.00 42.53 3.96
2859 3493 0.676466 CCGGCCTGAACAGTATGCAA 60.676 55.000 0.00 0.00 42.53 4.08
2860 3494 1.164411 CGGCCTGAACAGTATGCAAA 58.836 50.000 0.00 0.00 42.53 3.68
2861 3495 1.135689 CGGCCTGAACAGTATGCAAAC 60.136 52.381 0.00 0.00 42.53 2.93
2862 3496 1.885887 GGCCTGAACAGTATGCAAACA 59.114 47.619 0.00 0.00 42.53 2.83
2863 3497 2.095059 GGCCTGAACAGTATGCAAACAG 60.095 50.000 0.00 0.00 42.53 3.16
2864 3498 2.554032 GCCTGAACAGTATGCAAACAGT 59.446 45.455 0.00 0.00 42.53 3.55
2865 3499 3.751175 GCCTGAACAGTATGCAAACAGTA 59.249 43.478 0.00 0.00 42.53 2.74
2866 3500 4.215399 GCCTGAACAGTATGCAAACAGTAA 59.785 41.667 0.00 0.00 42.53 2.24
2867 3501 5.278266 GCCTGAACAGTATGCAAACAGTAAA 60.278 40.000 0.00 0.00 42.53 2.01
2868 3502 6.142817 CCTGAACAGTATGCAAACAGTAAAC 58.857 40.000 0.00 0.00 42.53 2.01
2869 3503 6.017109 CCTGAACAGTATGCAAACAGTAAACT 60.017 38.462 0.00 0.00 42.53 2.66
2870 3504 7.328277 TGAACAGTATGCAAACAGTAAACTT 57.672 32.000 0.00 0.00 42.53 2.66
2871 3505 7.414436 TGAACAGTATGCAAACAGTAAACTTC 58.586 34.615 0.00 0.00 42.53 3.01
2872 3506 7.282224 TGAACAGTATGCAAACAGTAAACTTCT 59.718 33.333 0.00 0.00 42.53 2.85
2873 3507 7.190920 ACAGTATGCAAACAGTAAACTTCTC 57.809 36.000 0.00 0.00 42.53 2.87
2874 3508 6.765989 ACAGTATGCAAACAGTAAACTTCTCA 59.234 34.615 0.00 0.00 42.53 3.27
2875 3509 7.072030 CAGTATGCAAACAGTAAACTTCTCAC 58.928 38.462 0.00 0.00 0.00 3.51
2876 3510 6.765989 AGTATGCAAACAGTAAACTTCTCACA 59.234 34.615 0.00 0.00 0.00 3.58
2877 3511 5.484173 TGCAAACAGTAAACTTCTCACAG 57.516 39.130 0.00 0.00 0.00 3.66
2878 3512 5.182487 TGCAAACAGTAAACTTCTCACAGA 58.818 37.500 0.00 0.00 0.00 3.41
2879 3513 5.822519 TGCAAACAGTAAACTTCTCACAGAT 59.177 36.000 0.00 0.00 0.00 2.90
2880 3514 6.017934 TGCAAACAGTAAACTTCTCACAGATC 60.018 38.462 0.00 0.00 0.00 2.75
2881 3515 6.566753 GCAAACAGTAAACTTCTCACAGATCC 60.567 42.308 0.00 0.00 0.00 3.36
2882 3516 5.153950 ACAGTAAACTTCTCACAGATCCC 57.846 43.478 0.00 0.00 0.00 3.85
2883 3517 4.593206 ACAGTAAACTTCTCACAGATCCCA 59.407 41.667 0.00 0.00 0.00 4.37
2884 3518 5.071788 ACAGTAAACTTCTCACAGATCCCAA 59.928 40.000 0.00 0.00 0.00 4.12
2885 3519 5.997746 CAGTAAACTTCTCACAGATCCCAAA 59.002 40.000 0.00 0.00 0.00 3.28
2886 3520 6.656693 CAGTAAACTTCTCACAGATCCCAAAT 59.343 38.462 0.00 0.00 0.00 2.32
2887 3521 7.175641 CAGTAAACTTCTCACAGATCCCAAATT 59.824 37.037 0.00 0.00 0.00 1.82
2888 3522 5.972107 AACTTCTCACAGATCCCAAATTG 57.028 39.130 0.00 0.00 0.00 2.32
2889 3523 4.990526 ACTTCTCACAGATCCCAAATTGT 58.009 39.130 0.00 0.00 0.00 2.71
2890 3524 5.006386 ACTTCTCACAGATCCCAAATTGTC 58.994 41.667 0.00 0.00 0.00 3.18
2891 3525 4.916041 TCTCACAGATCCCAAATTGTCT 57.084 40.909 0.00 0.00 0.00 3.41
2892 3526 5.246981 TCTCACAGATCCCAAATTGTCTT 57.753 39.130 0.00 0.00 0.00 3.01
2893 3527 5.634118 TCTCACAGATCCCAAATTGTCTTT 58.366 37.500 0.00 0.00 0.00 2.52
2894 3528 6.070656 TCTCACAGATCCCAAATTGTCTTTT 58.929 36.000 0.00 0.00 0.00 2.27
2895 3529 6.550854 TCTCACAGATCCCAAATTGTCTTTTT 59.449 34.615 0.00 0.00 0.00 1.94
2921 3555 3.895232 GAGAACTACTCAGATGCCCAA 57.105 47.619 0.00 0.00 44.36 4.12
2922 3556 4.207891 GAGAACTACTCAGATGCCCAAA 57.792 45.455 0.00 0.00 44.36 3.28
2923 3557 3.935828 GAGAACTACTCAGATGCCCAAAC 59.064 47.826 0.00 0.00 44.36 2.93
2924 3558 3.327757 AGAACTACTCAGATGCCCAAACA 59.672 43.478 0.00 0.00 0.00 2.83
2925 3559 3.059352 ACTACTCAGATGCCCAAACAC 57.941 47.619 0.00 0.00 0.00 3.32
2926 3560 2.371841 ACTACTCAGATGCCCAAACACA 59.628 45.455 0.00 0.00 0.00 3.72
2927 3561 2.363306 ACTCAGATGCCCAAACACAA 57.637 45.000 0.00 0.00 0.00 3.33
2928 3562 2.880443 ACTCAGATGCCCAAACACAAT 58.120 42.857 0.00 0.00 0.00 2.71
2929 3563 2.559668 ACTCAGATGCCCAAACACAATG 59.440 45.455 0.00 0.00 0.00 2.82
2930 3564 2.821378 CTCAGATGCCCAAACACAATGA 59.179 45.455 0.00 0.00 0.00 2.57
2931 3565 3.229293 TCAGATGCCCAAACACAATGAA 58.771 40.909 0.00 0.00 0.00 2.57
2932 3566 3.640498 TCAGATGCCCAAACACAATGAAA 59.360 39.130 0.00 0.00 0.00 2.69
2933 3567 4.283978 TCAGATGCCCAAACACAATGAAAT 59.716 37.500 0.00 0.00 0.00 2.17
2934 3568 4.998672 CAGATGCCCAAACACAATGAAATT 59.001 37.500 0.00 0.00 36.63 1.82
2935 3569 5.470777 CAGATGCCCAAACACAATGAAATTT 59.529 36.000 0.00 0.00 31.22 1.82
2936 3570 5.470777 AGATGCCCAAACACAATGAAATTTG 59.529 36.000 0.00 0.00 31.22 2.32
2937 3571 4.521146 TGCCCAAACACAATGAAATTTGT 58.479 34.783 0.00 0.00 40.39 2.83
2938 3572 4.574013 TGCCCAAACACAATGAAATTTGTC 59.426 37.500 0.00 0.00 37.73 3.18
2939 3573 4.574013 GCCCAAACACAATGAAATTTGTCA 59.426 37.500 0.00 0.00 37.73 3.58
2940 3574 5.503846 GCCCAAACACAATGAAATTTGTCAC 60.504 40.000 0.00 0.00 37.73 3.67
2941 3575 5.276773 CCCAAACACAATGAAATTTGTCACG 60.277 40.000 0.00 0.00 37.73 4.35
2942 3576 5.290643 CCAAACACAATGAAATTTGTCACGT 59.709 36.000 0.00 0.00 37.73 4.49
2943 3577 6.473778 CCAAACACAATGAAATTTGTCACGTA 59.526 34.615 0.00 0.00 37.73 3.57
2944 3578 7.326645 CAAACACAATGAAATTTGTCACGTAC 58.673 34.615 0.00 0.00 37.73 3.67
2945 3579 6.125327 ACACAATGAAATTTGTCACGTACA 57.875 33.333 0.00 0.00 37.73 2.90
2946 3580 6.734137 ACACAATGAAATTTGTCACGTACAT 58.266 32.000 0.00 0.00 37.73 2.29
2947 3581 6.855914 ACACAATGAAATTTGTCACGTACATC 59.144 34.615 0.00 0.00 37.73 3.06
2948 3582 6.855403 CACAATGAAATTTGTCACGTACATCA 59.145 34.615 0.00 0.00 37.73 3.07
2949 3583 6.855914 ACAATGAAATTTGTCACGTACATCAC 59.144 34.615 0.00 0.00 38.10 3.06
2950 3584 6.031314 CAATGAAATTTGTCACGTACATCACG 59.969 38.462 0.00 0.00 46.37 4.35
2951 3585 7.319908 AATGAAATTTGTCACGTACATCACGC 61.320 38.462 0.00 0.00 44.97 5.34
2952 3586 9.573507 AATGAAATTTGTCACGTACATCACGCA 62.574 37.037 0.00 0.00 44.97 5.24
2959 3593 2.487406 CGTACATCACGCACTTGAAC 57.513 50.000 0.00 0.00 45.03 3.18
2960 3594 1.790043 CGTACATCACGCACTTGAACA 59.210 47.619 0.00 0.00 45.03 3.18
2961 3595 2.411748 CGTACATCACGCACTTGAACAT 59.588 45.455 0.00 0.00 45.03 2.71
2962 3596 3.481951 CGTACATCACGCACTTGAACATC 60.482 47.826 0.00 0.00 45.03 3.06
2963 3597 2.771089 ACATCACGCACTTGAACATCT 58.229 42.857 0.00 0.00 0.00 2.90
2964 3598 2.738846 ACATCACGCACTTGAACATCTC 59.261 45.455 0.00 0.00 0.00 2.75
2965 3599 1.795768 TCACGCACTTGAACATCTCC 58.204 50.000 0.00 0.00 0.00 3.71
2966 3600 0.798776 CACGCACTTGAACATCTCCC 59.201 55.000 0.00 0.00 0.00 4.30
2967 3601 0.396435 ACGCACTTGAACATCTCCCA 59.604 50.000 0.00 0.00 0.00 4.37
2968 3602 0.798776 CGCACTTGAACATCTCCCAC 59.201 55.000 0.00 0.00 0.00 4.61
2969 3603 0.798776 GCACTTGAACATCTCCCACG 59.201 55.000 0.00 0.00 0.00 4.94
2970 3604 1.442769 CACTTGAACATCTCCCACGG 58.557 55.000 0.00 0.00 0.00 4.94
2971 3605 0.324943 ACTTGAACATCTCCCACGGG 59.675 55.000 0.00 0.00 0.00 5.28
2972 3606 0.324943 CTTGAACATCTCCCACGGGT 59.675 55.000 1.07 0.00 36.47 5.28
2973 3607 0.036164 TTGAACATCTCCCACGGGTG 59.964 55.000 1.07 0.00 36.47 4.61
2974 3608 0.834261 TGAACATCTCCCACGGGTGA 60.834 55.000 9.24 9.24 41.27 4.02
2975 3609 0.323629 GAACATCTCCCACGGGTGAA 59.676 55.000 10.77 0.00 40.55 3.18
2976 3610 0.324943 AACATCTCCCACGGGTGAAG 59.675 55.000 10.77 9.10 40.55 3.02
2977 3611 0.544357 ACATCTCCCACGGGTGAAGA 60.544 55.000 14.54 5.58 40.55 2.87
2978 3612 0.833287 CATCTCCCACGGGTGAAGAT 59.167 55.000 10.77 5.12 40.55 2.40
2979 3613 0.833287 ATCTCCCACGGGTGAAGATG 59.167 55.000 10.77 1.57 40.55 2.90
2980 3614 1.450312 CTCCCACGGGTGAAGATGC 60.450 63.158 1.07 0.00 36.47 3.91
2981 3615 2.184020 CTCCCACGGGTGAAGATGCA 62.184 60.000 1.07 0.00 36.47 3.96
2982 3616 2.040544 CCCACGGGTGAAGATGCAC 61.041 63.158 0.00 0.00 38.05 4.57
2989 3623 3.165606 GTGAAGATGCACCTGAGGG 57.834 57.895 2.38 0.00 38.88 4.30
2990 3624 1.028868 GTGAAGATGCACCTGAGGGC 61.029 60.000 2.38 4.06 35.63 5.19
2991 3625 1.452833 GAAGATGCACCTGAGGGCC 60.453 63.158 2.38 0.00 35.63 5.80
2992 3626 2.202236 GAAGATGCACCTGAGGGCCA 62.202 60.000 6.18 0.00 35.63 5.36
2993 3627 1.792757 AAGATGCACCTGAGGGCCAA 61.793 55.000 6.18 0.00 35.63 4.52
2994 3628 1.304381 GATGCACCTGAGGGCCAAA 60.304 57.895 6.18 0.00 35.63 3.28
2995 3629 0.899717 GATGCACCTGAGGGCCAAAA 60.900 55.000 6.18 0.00 35.63 2.44
2996 3630 1.187567 ATGCACCTGAGGGCCAAAAC 61.188 55.000 6.18 0.00 35.63 2.43
2997 3631 1.832167 GCACCTGAGGGCCAAAACA 60.832 57.895 6.18 0.00 35.63 2.83
2998 3632 2.041153 CACCTGAGGGCCAAAACAC 58.959 57.895 6.18 0.00 35.63 3.32
2999 3633 1.152546 ACCTGAGGGCCAAAACACC 60.153 57.895 6.18 0.00 35.63 4.16
3004 3638 2.526110 GGGCCAAAACACCCTCCT 59.474 61.111 4.39 0.00 43.36 3.69
3005 3639 1.606601 GGGCCAAAACACCCTCCTC 60.607 63.158 4.39 0.00 43.36 3.71
3006 3640 1.606601 GGCCAAAACACCCTCCTCC 60.607 63.158 0.00 0.00 0.00 4.30
3007 3641 1.460699 GCCAAAACACCCTCCTCCT 59.539 57.895 0.00 0.00 0.00 3.69
3008 3642 0.895559 GCCAAAACACCCTCCTCCTG 60.896 60.000 0.00 0.00 0.00 3.86
3009 3643 0.478507 CCAAAACACCCTCCTCCTGT 59.521 55.000 0.00 0.00 0.00 4.00
3010 3644 1.609208 CAAAACACCCTCCTCCTGTG 58.391 55.000 0.00 0.00 36.11 3.66
3011 3645 0.178990 AAAACACCCTCCTCCTGTGC 60.179 55.000 0.00 0.00 33.30 4.57
3012 3646 1.062488 AAACACCCTCCTCCTGTGCT 61.062 55.000 0.00 0.00 33.30 4.40
3013 3647 1.062488 AACACCCTCCTCCTGTGCTT 61.062 55.000 0.00 0.00 33.30 3.91
3014 3648 1.298014 CACCCTCCTCCTGTGCTTC 59.702 63.158 0.00 0.00 0.00 3.86
3015 3649 1.920835 ACCCTCCTCCTGTGCTTCC 60.921 63.158 0.00 0.00 0.00 3.46
3016 3650 1.614824 CCCTCCTCCTGTGCTTCCT 60.615 63.158 0.00 0.00 0.00 3.36
3017 3651 0.325671 CCCTCCTCCTGTGCTTCCTA 60.326 60.000 0.00 0.00 0.00 2.94
3018 3652 0.827368 CCTCCTCCTGTGCTTCCTAC 59.173 60.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.527887 CGATGATTGACGAGTCGTTCTG 59.472 50.000 20.91 5.17 41.37 3.02
72 73 3.866582 CGATGAGGTCCCCTGGGC 61.867 72.222 7.39 0.00 31.76 5.36
125 131 3.008813 ACTTCAGACTTGCATCACCAGAT 59.991 43.478 0.00 0.00 33.87 2.90
133 139 1.620819 AGACGGACTTCAGACTTGCAT 59.379 47.619 0.00 0.00 0.00 3.96
144 150 2.281295 GGGACGGGAAGACGGACTT 61.281 63.158 0.00 0.00 42.03 3.01
155 161 1.627864 AAAAATGGAACTGGGACGGG 58.372 50.000 0.00 0.00 40.47 5.28
187 193 9.213777 TCCTTCTTGTACTATCAAATATGGAGT 57.786 33.333 0.00 0.00 0.00 3.85
192 198 9.698309 CGTGATCCTTCTTGTACTATCAAATAT 57.302 33.333 0.00 0.00 0.00 1.28
274 280 4.464069 AGAGCAGATAACCTGTTGTCTC 57.536 45.455 6.35 3.29 44.71 3.36
284 290 4.260948 GGCAGCATGTAAAGAGCAGATAAC 60.261 45.833 0.00 0.00 39.31 1.89
286 292 3.470709 GGCAGCATGTAAAGAGCAGATA 58.529 45.455 0.00 0.00 39.31 1.98
318 324 2.282462 CCAAGGGCACACCAGACC 60.282 66.667 0.00 0.00 43.89 3.85
358 364 3.059287 GGACCTCCCAGATATCGCT 57.941 57.895 0.00 0.00 34.14 4.93
611 621 5.620879 GCAGGGAAAGAAATAAGCAGAACTG 60.621 44.000 0.00 0.00 0.00 3.16
641 651 3.769844 TGTGGCTTTCTACCCAACAAAAA 59.230 39.130 0.00 0.00 31.90 1.94
689 746 0.319297 CAAAGCAGCAAACCCAGAGC 60.319 55.000 0.00 0.00 0.00 4.09
713 770 6.364701 CCCCACCTGAATATGTATTTCTCAA 58.635 40.000 0.00 0.00 0.00 3.02
748 805 6.059484 TCTTTTTATTTGAGAAGTCACCGGT 58.941 36.000 0.00 0.00 30.10 5.28
765 822 3.499745 GCTTCCCCCAGGACTTCTTTTTA 60.500 47.826 0.00 0.00 43.90 1.52
901 962 1.681264 CTTCTTTGCGTGGGAAAGGTT 59.319 47.619 9.27 0.00 32.26 3.50
959 1025 1.237285 AAGCAATGCACCGGTCTCAC 61.237 55.000 2.59 0.00 0.00 3.51
994 1060 7.646922 GCTAATAAGTGAATCAAGCATTTCCAG 59.353 37.037 0.00 0.00 0.00 3.86
1064 1130 5.005203 GTCAGATAAAGTGAAGATGACAGCG 59.995 44.000 0.00 0.00 36.47 5.18
1131 1197 2.105821 CAGTCAACACCTTTGGGTCCTA 59.894 50.000 0.00 0.00 45.41 2.94
1292 1358 3.869912 GCTTGATACTTCTGGACTTGGCA 60.870 47.826 0.00 0.00 0.00 4.92
1337 1403 1.063174 CTTGCCATTAGAGCAGCGAAC 59.937 52.381 0.00 0.00 42.17 3.95
1649 1715 1.693083 CGTTGGCGATTTCGGAGGTC 61.693 60.000 1.75 0.00 41.33 3.85
1754 1820 3.205338 CACCGAGATATCCAAATGTGCA 58.795 45.455 0.00 0.00 0.00 4.57
1759 1825 2.568623 GGCCACCGAGATATCCAAAT 57.431 50.000 0.00 0.00 0.00 2.32
1787 1853 3.496131 GCGGTGTACATGTGGCGG 61.496 66.667 9.11 4.20 0.00 6.13
1982 2129 1.151668 CCAGACCTTTGTTCTGCTCG 58.848 55.000 0.00 0.00 0.00 5.03
2003 2150 2.492012 CTCACTCACAGCTGCTTCTTT 58.508 47.619 15.27 0.00 0.00 2.52
2041 2188 8.420222 GGATGACCATCTACATATATCTCCTTG 58.580 40.741 9.56 0.00 37.92 3.61
2055 2202 4.352893 TGTGTCTTCTGGATGACCATCTA 58.647 43.478 9.56 3.25 45.87 1.98
2061 2208 8.492673 TGTTATTATTGTGTCTTCTGGATGAC 57.507 34.615 8.94 8.94 36.41 3.06
2067 2214 7.065085 CCCTGTCTGTTATTATTGTGTCTTCTG 59.935 40.741 0.00 0.00 0.00 3.02
2074 2224 4.336433 CCAGCCCTGTCTGTTATTATTGTG 59.664 45.833 0.00 0.00 32.32 3.33
2093 2244 2.047844 TGACGCTTCTCTGCCAGC 60.048 61.111 0.00 0.00 0.00 4.85
2162 2313 7.986085 ACATGTTGCTGTAACTATCTTTTCT 57.014 32.000 9.94 0.00 40.05 2.52
2183 2334 1.070601 GCAAGGGCAAACTTCCAACAT 59.929 47.619 0.00 0.00 40.72 2.71
2189 2340 4.385748 CGAAAAATAGCAAGGGCAAACTTC 59.614 41.667 0.00 0.00 44.61 3.01
2195 2346 2.235016 ACACGAAAAATAGCAAGGGCA 58.765 42.857 0.00 0.00 44.61 5.36
2202 2353 6.043411 ACTCCTCTCATACACGAAAAATAGC 58.957 40.000 0.00 0.00 0.00 2.97
2222 2373 5.882557 CACATGGCTCCCATAATTATACTCC 59.117 44.000 0.00 0.00 43.15 3.85
2227 2378 9.412460 CATAATACACATGGCTCCCATAATTAT 57.588 33.333 0.00 0.00 43.15 1.28
2239 2390 8.786898 AGAATTGTACATCATAATACACATGGC 58.213 33.333 0.00 0.00 31.09 4.40
2266 2893 8.672405 GTTTAATTTAACACGACAGTAAAACGG 58.328 33.333 2.54 0.00 0.00 4.44
2273 2900 6.193761 CCAACGTTTAATTTAACACGACAGT 58.806 36.000 20.42 0.00 36.48 3.55
2274 2901 5.114423 GCCAACGTTTAATTTAACACGACAG 59.886 40.000 20.42 13.17 36.48 3.51
2275 2902 4.968788 GCCAACGTTTAATTTAACACGACA 59.031 37.500 20.42 0.00 36.48 4.35
2276 2903 4.968788 TGCCAACGTTTAATTTAACACGAC 59.031 37.500 20.42 5.32 36.48 4.34
2277 2904 5.165911 TGCCAACGTTTAATTTAACACGA 57.834 34.783 20.42 5.34 36.48 4.35
2278 2905 5.868177 TTGCCAACGTTTAATTTAACACG 57.132 34.783 0.00 15.73 38.62 4.49
2279 2906 6.585852 CCATTGCCAACGTTTAATTTAACAC 58.414 36.000 0.00 0.00 0.00 3.32
2280 2907 5.177696 GCCATTGCCAACGTTTAATTTAACA 59.822 36.000 0.00 0.00 0.00 2.41
2281 2908 5.407084 AGCCATTGCCAACGTTTAATTTAAC 59.593 36.000 0.00 0.00 38.69 2.01
2282 2909 5.542779 AGCCATTGCCAACGTTTAATTTAA 58.457 33.333 0.00 0.00 38.69 1.52
2283 2910 5.140747 AGCCATTGCCAACGTTTAATTTA 57.859 34.783 0.00 0.00 38.69 1.40
2284 2911 4.001618 AGCCATTGCCAACGTTTAATTT 57.998 36.364 0.00 0.00 38.69 1.82
2285 2912 3.676291 AGCCATTGCCAACGTTTAATT 57.324 38.095 0.00 0.00 38.69 1.40
2286 2913 3.324993 CAAGCCATTGCCAACGTTTAAT 58.675 40.909 0.00 0.00 38.69 1.40
2314 2941 1.750193 TTTGGCTCCTTATTCAGGCG 58.250 50.000 0.00 0.00 43.55 5.52
2322 2949 3.992943 TTTCCTCGATTTGGCTCCTTA 57.007 42.857 0.00 0.00 0.00 2.69
2324 2951 3.019564 CAATTTCCTCGATTTGGCTCCT 58.980 45.455 0.00 0.00 0.00 3.69
2333 2961 4.092968 GTGACGCTTTACAATTTCCTCGAT 59.907 41.667 0.00 0.00 0.00 3.59
2369 2997 3.939592 GCCTTGGGAGTACAAATGAGTAC 59.060 47.826 0.00 0.00 43.61 2.73
2370 2998 3.585289 TGCCTTGGGAGTACAAATGAGTA 59.415 43.478 0.00 0.00 0.00 2.59
2371 2999 2.375174 TGCCTTGGGAGTACAAATGAGT 59.625 45.455 0.00 0.00 0.00 3.41
2372 3000 3.071874 TGCCTTGGGAGTACAAATGAG 57.928 47.619 0.00 0.00 0.00 2.90
2373 3001 3.737559 ATGCCTTGGGAGTACAAATGA 57.262 42.857 0.00 0.00 0.00 2.57
2374 3002 7.765695 ATTATATGCCTTGGGAGTACAAATG 57.234 36.000 0.00 0.00 0.00 2.32
2375 3003 8.004215 TGAATTATATGCCTTGGGAGTACAAAT 58.996 33.333 0.00 0.00 0.00 2.32
2376 3004 7.284489 GTGAATTATATGCCTTGGGAGTACAAA 59.716 37.037 0.00 0.00 0.00 2.83
2377 3005 6.770785 GTGAATTATATGCCTTGGGAGTACAA 59.229 38.462 0.00 0.00 0.00 2.41
2378 3006 6.126623 TGTGAATTATATGCCTTGGGAGTACA 60.127 38.462 0.00 0.00 0.00 2.90
2379 3007 6.296026 TGTGAATTATATGCCTTGGGAGTAC 58.704 40.000 0.00 0.00 0.00 2.73
2380 3008 6.508030 TGTGAATTATATGCCTTGGGAGTA 57.492 37.500 0.00 0.00 0.00 2.59
2381 3009 5.387113 TGTGAATTATATGCCTTGGGAGT 57.613 39.130 0.00 0.00 0.00 3.85
2382 3010 6.906157 AATGTGAATTATATGCCTTGGGAG 57.094 37.500 0.00 0.00 0.00 4.30
2383 3011 6.462768 GCAAATGTGAATTATATGCCTTGGGA 60.463 38.462 0.00 0.00 0.00 4.37
2384 3012 5.697633 GCAAATGTGAATTATATGCCTTGGG 59.302 40.000 0.00 0.00 0.00 4.12
2385 3013 5.697633 GGCAAATGTGAATTATATGCCTTGG 59.302 40.000 6.63 0.00 46.34 3.61
2386 3014 6.774354 GGCAAATGTGAATTATATGCCTTG 57.226 37.500 6.63 0.00 46.34 3.61
2390 3018 5.762045 ACGAGGCAAATGTGAATTATATGC 58.238 37.500 0.00 0.00 0.00 3.14
2391 3019 8.633075 AAAACGAGGCAAATGTGAATTATATG 57.367 30.769 0.00 0.00 0.00 1.78
2392 3020 8.465999 TGAAAACGAGGCAAATGTGAATTATAT 58.534 29.630 0.00 0.00 0.00 0.86
2393 3021 7.821652 TGAAAACGAGGCAAATGTGAATTATA 58.178 30.769 0.00 0.00 0.00 0.98
2394 3022 6.686630 TGAAAACGAGGCAAATGTGAATTAT 58.313 32.000 0.00 0.00 0.00 1.28
2395 3023 6.078202 TGAAAACGAGGCAAATGTGAATTA 57.922 33.333 0.00 0.00 0.00 1.40
2396 3024 4.942852 TGAAAACGAGGCAAATGTGAATT 58.057 34.783 0.00 0.00 0.00 2.17
2397 3025 4.582701 TGAAAACGAGGCAAATGTGAAT 57.417 36.364 0.00 0.00 0.00 2.57
2398 3026 4.582701 ATGAAAACGAGGCAAATGTGAA 57.417 36.364 0.00 0.00 0.00 3.18
2399 3027 4.379394 GCTATGAAAACGAGGCAAATGTGA 60.379 41.667 0.00 0.00 0.00 3.58
2400 3028 3.853671 GCTATGAAAACGAGGCAAATGTG 59.146 43.478 0.00 0.00 0.00 3.21
2401 3029 3.758554 AGCTATGAAAACGAGGCAAATGT 59.241 39.130 0.00 0.00 0.00 2.71
2402 3030 4.361451 AGCTATGAAAACGAGGCAAATG 57.639 40.909 0.00 0.00 0.00 2.32
2403 3031 5.186198 AGTAGCTATGAAAACGAGGCAAAT 58.814 37.500 0.00 0.00 0.00 2.32
2404 3032 4.575885 AGTAGCTATGAAAACGAGGCAAA 58.424 39.130 0.00 0.00 0.00 3.68
2405 3033 4.202245 AGTAGCTATGAAAACGAGGCAA 57.798 40.909 0.00 0.00 0.00 4.52
2406 3034 3.887621 AGTAGCTATGAAAACGAGGCA 57.112 42.857 0.00 0.00 0.00 4.75
2407 3035 5.107133 TGTAAGTAGCTATGAAAACGAGGC 58.893 41.667 0.00 0.00 0.00 4.70
2408 3036 7.033791 TCTTGTAAGTAGCTATGAAAACGAGG 58.966 38.462 0.00 0.00 0.00 4.63
2409 3037 8.462143 TTCTTGTAAGTAGCTATGAAAACGAG 57.538 34.615 0.00 1.72 0.00 4.18
2410 3038 7.063074 GCTTCTTGTAAGTAGCTATGAAAACGA 59.937 37.037 13.78 0.00 43.50 3.85
2411 3039 7.174082 GCTTCTTGTAAGTAGCTATGAAAACG 58.826 38.462 13.78 0.00 43.50 3.60
2421 3049 5.236478 TCACAACAAGCTTCTTGTAAGTAGC 59.764 40.000 18.13 13.34 46.10 3.58
2422 3050 6.844696 TCACAACAAGCTTCTTGTAAGTAG 57.155 37.500 18.13 7.47 31.50 2.57
2423 3051 6.260050 CCTTCACAACAAGCTTCTTGTAAGTA 59.740 38.462 18.13 4.02 31.50 2.24
2424 3052 5.066505 CCTTCACAACAAGCTTCTTGTAAGT 59.933 40.000 18.13 10.91 31.50 2.24
2425 3053 5.296780 TCCTTCACAACAAGCTTCTTGTAAG 59.703 40.000 18.13 18.44 31.50 2.34
2426 3054 5.065988 GTCCTTCACAACAAGCTTCTTGTAA 59.934 40.000 18.13 3.07 31.50 2.41
2427 3055 4.574828 GTCCTTCACAACAAGCTTCTTGTA 59.425 41.667 18.13 5.08 31.50 2.41
2428 3056 3.378427 GTCCTTCACAACAAGCTTCTTGT 59.622 43.478 13.62 13.62 0.00 3.16
2429 3057 3.629398 AGTCCTTCACAACAAGCTTCTTG 59.371 43.478 12.33 12.33 0.00 3.02
2430 3058 3.879892 GAGTCCTTCACAACAAGCTTCTT 59.120 43.478 0.00 0.00 0.00 2.52
2431 3059 3.135530 AGAGTCCTTCACAACAAGCTTCT 59.864 43.478 0.00 0.00 0.00 2.85
2432 3060 3.471680 AGAGTCCTTCACAACAAGCTTC 58.528 45.455 0.00 0.00 0.00 3.86
2433 3061 3.567478 AGAGTCCTTCACAACAAGCTT 57.433 42.857 0.00 0.00 0.00 3.74
2434 3062 3.209410 CAAGAGTCCTTCACAACAAGCT 58.791 45.455 0.00 0.00 0.00 3.74
2435 3063 2.945668 ACAAGAGTCCTTCACAACAAGC 59.054 45.455 0.00 0.00 0.00 4.01
2436 3064 6.867662 ATAACAAGAGTCCTTCACAACAAG 57.132 37.500 0.00 0.00 0.00 3.16
2437 3065 8.740123 TTAATAACAAGAGTCCTTCACAACAA 57.260 30.769 0.00 0.00 0.00 2.83
2438 3066 8.783093 CATTAATAACAAGAGTCCTTCACAACA 58.217 33.333 0.00 0.00 0.00 3.33
2439 3067 7.750903 GCATTAATAACAAGAGTCCTTCACAAC 59.249 37.037 0.00 0.00 0.00 3.32
2440 3068 7.665559 AGCATTAATAACAAGAGTCCTTCACAA 59.334 33.333 0.00 0.00 0.00 3.33
2441 3069 7.168219 AGCATTAATAACAAGAGTCCTTCACA 58.832 34.615 0.00 0.00 0.00 3.58
2442 3070 7.617041 AGCATTAATAACAAGAGTCCTTCAC 57.383 36.000 0.00 0.00 0.00 3.18
2443 3071 9.547753 GATAGCATTAATAACAAGAGTCCTTCA 57.452 33.333 0.00 0.00 0.00 3.02
2444 3072 9.771534 AGATAGCATTAATAACAAGAGTCCTTC 57.228 33.333 0.00 0.00 0.00 3.46
2445 3073 9.553064 CAGATAGCATTAATAACAAGAGTCCTT 57.447 33.333 0.00 0.00 0.00 3.36
2446 3074 7.659390 GCAGATAGCATTAATAACAAGAGTCCT 59.341 37.037 0.00 0.00 44.79 3.85
2447 3075 7.801752 GCAGATAGCATTAATAACAAGAGTCC 58.198 38.462 0.00 0.00 44.79 3.85
2465 3093 8.090831 TCATAAACTTAGCACCATAGCAGATAG 58.909 37.037 0.00 0.00 36.85 2.08
2473 3101 6.998074 CCAGGAATCATAAACTTAGCACCATA 59.002 38.462 0.00 0.00 0.00 2.74
2477 3105 6.016777 CCATCCAGGAATCATAAACTTAGCAC 60.017 42.308 0.00 0.00 41.22 4.40
2481 3109 6.266131 AGCCATCCAGGAATCATAAACTTA 57.734 37.500 0.00 0.00 41.22 2.24
2485 3113 4.104383 GGAGCCATCCAGGAATCATAAA 57.896 45.455 0.00 0.00 45.87 1.40
2499 3127 1.281867 TCATTCTCAAACCGGAGCCAT 59.718 47.619 9.46 0.00 34.84 4.40
2501 3129 1.087501 GTCATTCTCAAACCGGAGCC 58.912 55.000 9.46 0.00 34.84 4.70
2512 3140 4.272489 TCCCCAACATCAATGTCATTCTC 58.728 43.478 0.00 0.00 40.80 2.87
2513 3141 4.320546 TCCCCAACATCAATGTCATTCT 57.679 40.909 0.00 0.00 40.80 2.40
2519 3147 2.158325 ACCACTTCCCCAACATCAATGT 60.158 45.455 0.00 0.00 44.20 2.71
2522 3150 2.315176 CAACCACTTCCCCAACATCAA 58.685 47.619 0.00 0.00 0.00 2.57
2535 3163 2.548067 GGTCGTCATGAGAACAACCACT 60.548 50.000 0.00 0.00 0.00 4.00
2536 3164 1.798813 GGTCGTCATGAGAACAACCAC 59.201 52.381 0.00 0.00 0.00 4.16
2537 3165 1.414550 TGGTCGTCATGAGAACAACCA 59.585 47.619 9.57 9.47 31.60 3.67
2538 3166 2.163818 TGGTCGTCATGAGAACAACC 57.836 50.000 9.57 7.42 31.60 3.77
2539 3167 2.480419 CCTTGGTCGTCATGAGAACAAC 59.520 50.000 16.72 3.84 40.03 3.32
2540 3168 2.549992 CCCTTGGTCGTCATGAGAACAA 60.550 50.000 18.50 18.50 42.34 2.83
2541 3169 1.001974 CCCTTGGTCGTCATGAGAACA 59.998 52.381 0.00 2.00 32.86 3.18
2542 3170 1.676014 CCCCTTGGTCGTCATGAGAAC 60.676 57.143 0.00 0.00 0.00 3.01
2543 3171 0.613260 CCCCTTGGTCGTCATGAGAA 59.387 55.000 0.00 0.00 0.00 2.87
2544 3172 1.264749 CCCCCTTGGTCGTCATGAGA 61.265 60.000 0.00 0.00 0.00 3.27
2545 3173 1.221840 CCCCCTTGGTCGTCATGAG 59.778 63.158 0.00 0.00 0.00 2.90
2547 3175 1.221840 CTCCCCCTTGGTCGTCATG 59.778 63.158 0.00 0.00 34.77 3.07
2549 3177 2.606519 CCTCCCCCTTGGTCGTCA 60.607 66.667 0.00 0.00 34.77 4.35
2550 3178 2.606826 ACCTCCCCCTTGGTCGTC 60.607 66.667 0.00 0.00 34.77 4.20
2551 3179 2.765705 ATCACCTCCCCCTTGGTCGT 62.766 60.000 0.00 0.00 33.75 4.34
2552 3180 1.562672 AATCACCTCCCCCTTGGTCG 61.563 60.000 0.00 0.00 33.75 4.79
2553 3181 0.034089 CAATCACCTCCCCCTTGGTC 60.034 60.000 0.00 0.00 33.75 4.02
2554 3182 2.087248 CAATCACCTCCCCCTTGGT 58.913 57.895 0.00 0.00 36.96 3.67
2555 3183 1.380380 GCAATCACCTCCCCCTTGG 60.380 63.158 0.00 0.00 0.00 3.61
2556 3184 1.380380 GGCAATCACCTCCCCCTTG 60.380 63.158 0.00 0.00 0.00 3.61
2557 3185 1.224003 ATGGCAATCACCTCCCCCTT 61.224 55.000 0.00 0.00 0.00 3.95
2558 3186 1.224003 AATGGCAATCACCTCCCCCT 61.224 55.000 0.00 0.00 0.00 4.79
2560 3188 1.044790 CCAATGGCAATCACCTCCCC 61.045 60.000 0.00 0.00 0.00 4.81
2561 3189 0.324645 ACCAATGGCAATCACCTCCC 60.325 55.000 0.00 0.00 0.00 4.30
2562 3190 2.435372 TACCAATGGCAATCACCTCC 57.565 50.000 0.00 0.00 0.00 4.30
2563 3191 2.549754 CGATACCAATGGCAATCACCTC 59.450 50.000 13.50 0.00 0.00 3.85
2564 3192 2.575532 CGATACCAATGGCAATCACCT 58.424 47.619 13.50 0.00 0.00 4.00
2565 3193 1.001378 GCGATACCAATGGCAATCACC 60.001 52.381 13.50 2.92 36.86 4.02
2566 3194 1.949525 AGCGATACCAATGGCAATCAC 59.050 47.619 13.50 5.81 39.14 3.06
2567 3195 1.948834 CAGCGATACCAATGGCAATCA 59.051 47.619 13.50 0.00 39.14 2.57
2569 3197 2.158769 TCTCAGCGATACCAATGGCAAT 60.159 45.455 0.00 0.00 39.14 3.56
2571 3199 0.829990 TCTCAGCGATACCAATGGCA 59.170 50.000 0.00 0.00 39.14 4.92
2572 3200 2.072298 GATCTCAGCGATACCAATGGC 58.928 52.381 0.00 0.00 37.11 4.40
2573 3201 2.693069 GGATCTCAGCGATACCAATGG 58.307 52.381 0.00 0.00 30.84 3.16
2595 3223 1.001974 TCAGTCGCCATAACAGCAGTT 59.998 47.619 0.00 0.00 41.74 3.16
2648 3276 1.126948 TGTGCCTCTGTCCATGACCA 61.127 55.000 0.00 0.00 0.00 4.02
2657 3285 1.656587 TTCCTGGTATGTGCCTCTGT 58.343 50.000 0.00 0.00 0.00 3.41
2663 3291 2.427095 GTTCCCATTTCCTGGTATGTGC 59.573 50.000 0.00 0.00 44.30 4.57
2664 3292 3.968265 AGTTCCCATTTCCTGGTATGTG 58.032 45.455 0.00 0.00 44.30 3.21
2666 3294 3.701040 CCAAGTTCCCATTTCCTGGTATG 59.299 47.826 0.00 0.00 44.30 2.39
2668 3296 2.719705 ACCAAGTTCCCATTTCCTGGTA 59.280 45.455 0.00 0.00 44.30 3.25
2671 3299 2.171003 GGACCAAGTTCCCATTTCCTG 58.829 52.381 0.00 0.00 0.00 3.86
2674 3308 1.173913 CCGGACCAAGTTCCCATTTC 58.826 55.000 0.00 0.00 31.03 2.17
2677 3311 1.378762 CACCGGACCAAGTTCCCAT 59.621 57.895 9.46 0.00 31.03 4.00
2681 3315 1.966451 CTGCCACCGGACCAAGTTC 60.966 63.158 9.46 0.00 0.00 3.01
2682 3316 2.113139 CTGCCACCGGACCAAGTT 59.887 61.111 9.46 0.00 0.00 2.66
2699 3333 1.005975 CGTTCATCATCTTTCGGACGC 60.006 52.381 0.00 0.00 0.00 5.19
2700 3334 2.526077 TCGTTCATCATCTTTCGGACG 58.474 47.619 0.00 0.00 0.00 4.79
2701 3335 2.860735 CCTCGTTCATCATCTTTCGGAC 59.139 50.000 0.00 0.00 0.00 4.79
2702 3336 2.159099 CCCTCGTTCATCATCTTTCGGA 60.159 50.000 0.00 0.00 0.00 4.55
2703 3337 2.205074 CCCTCGTTCATCATCTTTCGG 58.795 52.381 0.00 0.00 0.00 4.30
2704 3338 1.594862 GCCCTCGTTCATCATCTTTCG 59.405 52.381 0.00 0.00 0.00 3.46
2705 3339 2.869192 GAGCCCTCGTTCATCATCTTTC 59.131 50.000 0.00 0.00 0.00 2.62
2706 3340 2.420687 GGAGCCCTCGTTCATCATCTTT 60.421 50.000 0.00 0.00 0.00 2.52
2707 3341 1.139853 GGAGCCCTCGTTCATCATCTT 59.860 52.381 0.00 0.00 0.00 2.40
2708 3342 0.755686 GGAGCCCTCGTTCATCATCT 59.244 55.000 0.00 0.00 0.00 2.90
2709 3343 0.755686 AGGAGCCCTCGTTCATCATC 59.244 55.000 0.00 0.00 0.00 2.92
2710 3344 1.134280 CAAGGAGCCCTCGTTCATCAT 60.134 52.381 0.61 0.00 35.75 2.45
2711 3345 0.250234 CAAGGAGCCCTCGTTCATCA 59.750 55.000 0.61 0.00 35.75 3.07
2712 3346 0.537188 TCAAGGAGCCCTCGTTCATC 59.463 55.000 0.61 0.00 35.75 2.92
2713 3347 1.207791 ATCAAGGAGCCCTCGTTCAT 58.792 50.000 0.61 0.00 35.75 2.57
2714 3348 1.860641 TATCAAGGAGCCCTCGTTCA 58.139 50.000 0.61 0.00 35.75 3.18
2715 3349 2.827652 CTTATCAAGGAGCCCTCGTTC 58.172 52.381 0.61 0.00 35.75 3.95
2716 3350 1.134371 GCTTATCAAGGAGCCCTCGTT 60.134 52.381 0.00 0.00 38.10 3.85
2717 3351 0.466124 GCTTATCAAGGAGCCCTCGT 59.534 55.000 0.00 0.00 30.89 4.18
2718 3352 0.465705 TGCTTATCAAGGAGCCCTCG 59.534 55.000 0.00 0.00 38.11 4.63
2719 3353 2.502295 CATGCTTATCAAGGAGCCCTC 58.498 52.381 0.00 0.00 38.11 4.30
2720 3354 1.144503 CCATGCTTATCAAGGAGCCCT 59.855 52.381 0.00 0.00 35.62 5.19
2721 3355 1.613836 CCATGCTTATCAAGGAGCCC 58.386 55.000 0.00 0.00 35.62 5.19
2722 3356 1.143684 TCCCATGCTTATCAAGGAGCC 59.856 52.381 0.00 0.00 35.62 4.70
2723 3357 2.645838 TCCCATGCTTATCAAGGAGC 57.354 50.000 0.00 0.00 35.62 4.70
2724 3358 3.633986 GGTTTCCCATGCTTATCAAGGAG 59.366 47.826 0.00 0.00 35.62 3.69
2725 3359 3.011144 TGGTTTCCCATGCTTATCAAGGA 59.989 43.478 0.00 0.00 35.62 3.36
2726 3360 3.364549 TGGTTTCCCATGCTTATCAAGG 58.635 45.455 0.00 0.00 35.17 3.61
2727 3361 4.463891 AGTTGGTTTCCCATGCTTATCAAG 59.536 41.667 0.00 0.00 41.49 3.02
2728 3362 4.220382 CAGTTGGTTTCCCATGCTTATCAA 59.780 41.667 0.00 0.00 41.49 2.57
2729 3363 3.763360 CAGTTGGTTTCCCATGCTTATCA 59.237 43.478 0.00 0.00 41.49 2.15
2730 3364 4.016444 TCAGTTGGTTTCCCATGCTTATC 58.984 43.478 0.00 0.00 41.49 1.75
2731 3365 4.019174 CTCAGTTGGTTTCCCATGCTTAT 58.981 43.478 0.00 0.00 41.49 1.73
2732 3366 3.073798 TCTCAGTTGGTTTCCCATGCTTA 59.926 43.478 0.00 0.00 41.49 3.09
2733 3367 2.158475 TCTCAGTTGGTTTCCCATGCTT 60.158 45.455 0.00 0.00 41.49 3.91
2734 3368 1.425066 TCTCAGTTGGTTTCCCATGCT 59.575 47.619 0.00 0.00 41.49 3.79
2735 3369 1.909700 TCTCAGTTGGTTTCCCATGC 58.090 50.000 0.00 0.00 41.49 4.06
2736 3370 3.503748 GTCTTCTCAGTTGGTTTCCCATG 59.496 47.826 0.00 0.00 41.49 3.66
2737 3371 3.498661 GGTCTTCTCAGTTGGTTTCCCAT 60.499 47.826 0.00 0.00 41.49 4.00
2738 3372 2.158667 GGTCTTCTCAGTTGGTTTCCCA 60.159 50.000 0.00 0.00 39.65 4.37
2739 3373 2.505405 GGTCTTCTCAGTTGGTTTCCC 58.495 52.381 0.00 0.00 0.00 3.97
2740 3374 2.505405 GGGTCTTCTCAGTTGGTTTCC 58.495 52.381 0.00 0.00 0.00 3.13
2741 3375 2.158667 TGGGGTCTTCTCAGTTGGTTTC 60.159 50.000 0.00 0.00 0.00 2.78
2742 3376 1.850345 TGGGGTCTTCTCAGTTGGTTT 59.150 47.619 0.00 0.00 0.00 3.27
2743 3377 1.421646 CTGGGGTCTTCTCAGTTGGTT 59.578 52.381 0.00 0.00 0.00 3.67
2744 3378 1.059913 CTGGGGTCTTCTCAGTTGGT 58.940 55.000 0.00 0.00 0.00 3.67
2745 3379 0.322008 GCTGGGGTCTTCTCAGTTGG 60.322 60.000 0.00 0.00 0.00 3.77
2746 3380 0.689623 AGCTGGGGTCTTCTCAGTTG 59.310 55.000 0.00 0.00 0.00 3.16
2747 3381 0.689623 CAGCTGGGGTCTTCTCAGTT 59.310 55.000 5.57 0.00 0.00 3.16
2748 3382 0.178921 TCAGCTGGGGTCTTCTCAGT 60.179 55.000 15.13 0.00 0.00 3.41
2749 3383 0.536260 CTCAGCTGGGGTCTTCTCAG 59.464 60.000 15.13 0.00 0.00 3.35
2750 3384 0.178921 ACTCAGCTGGGGTCTTCTCA 60.179 55.000 20.01 0.00 0.00 3.27
2751 3385 0.248843 CACTCAGCTGGGGTCTTCTC 59.751 60.000 20.01 0.00 0.00 2.87
2752 3386 0.178921 TCACTCAGCTGGGGTCTTCT 60.179 55.000 20.01 0.00 0.00 2.85
2753 3387 0.687354 TTCACTCAGCTGGGGTCTTC 59.313 55.000 20.01 0.00 0.00 2.87
2754 3388 1.366319 ATTCACTCAGCTGGGGTCTT 58.634 50.000 20.01 0.00 0.00 3.01
2755 3389 2.254152 TATTCACTCAGCTGGGGTCT 57.746 50.000 20.01 1.86 0.00 3.85
2756 3390 3.118261 TGAATATTCACTCAGCTGGGGTC 60.118 47.826 20.01 3.95 31.01 4.46
2757 3391 2.846206 TGAATATTCACTCAGCTGGGGT 59.154 45.455 20.01 12.72 31.01 4.95
2758 3392 3.565764 TGAATATTCACTCAGCTGGGG 57.434 47.619 20.01 12.05 31.01 4.96
2759 3393 4.518211 GGATTGAATATTCACTCAGCTGGG 59.482 45.833 27.40 13.44 38.26 4.45
2760 3394 4.518211 GGGATTGAATATTCACTCAGCTGG 59.482 45.833 27.40 7.28 38.26 4.85
2761 3395 4.212847 CGGGATTGAATATTCACTCAGCTG 59.787 45.833 27.40 16.88 38.26 4.24
2762 3396 4.101585 TCGGGATTGAATATTCACTCAGCT 59.898 41.667 27.40 8.23 38.26 4.24
2763 3397 4.380531 TCGGGATTGAATATTCACTCAGC 58.619 43.478 27.40 14.25 38.26 4.26
2764 3398 4.450419 GCTCGGGATTGAATATTCACTCAG 59.550 45.833 27.40 21.92 38.26 3.35
2765 3399 4.380531 GCTCGGGATTGAATATTCACTCA 58.619 43.478 27.40 12.81 38.26 3.41
2766 3400 3.748568 GGCTCGGGATTGAATATTCACTC 59.251 47.826 21.60 21.60 36.83 3.51
2767 3401 3.392616 AGGCTCGGGATTGAATATTCACT 59.607 43.478 17.76 12.72 36.83 3.41
2768 3402 3.744660 AGGCTCGGGATTGAATATTCAC 58.255 45.455 17.76 7.52 36.83 3.18
2769 3403 5.513094 CCTTAGGCTCGGGATTGAATATTCA 60.513 44.000 14.23 14.23 34.92 2.57
2770 3404 4.938226 CCTTAGGCTCGGGATTGAATATTC 59.062 45.833 8.60 8.60 0.00 1.75
2771 3405 4.807643 GCCTTAGGCTCGGGATTGAATATT 60.808 45.833 17.16 0.00 46.69 1.28
2772 3406 3.307762 GCCTTAGGCTCGGGATTGAATAT 60.308 47.826 17.16 0.00 46.69 1.28
2773 3407 2.038557 GCCTTAGGCTCGGGATTGAATA 59.961 50.000 17.16 0.00 46.69 1.75
2774 3408 1.202818 GCCTTAGGCTCGGGATTGAAT 60.203 52.381 17.16 0.00 46.69 2.57
2775 3409 0.180406 GCCTTAGGCTCGGGATTGAA 59.820 55.000 17.16 0.00 46.69 2.69
2776 3410 1.830145 GCCTTAGGCTCGGGATTGA 59.170 57.895 17.16 0.00 46.69 2.57
2777 3411 4.464262 GCCTTAGGCTCGGGATTG 57.536 61.111 17.16 0.00 46.69 2.67
2787 3421 0.179034 GGGTGCAGATGAGCCTTAGG 60.179 60.000 0.00 0.00 0.00 2.69
2788 3422 0.531532 CGGGTGCAGATGAGCCTTAG 60.532 60.000 0.00 0.00 0.00 2.18
2789 3423 1.522092 CGGGTGCAGATGAGCCTTA 59.478 57.895 0.00 0.00 0.00 2.69
2790 3424 2.270205 CGGGTGCAGATGAGCCTT 59.730 61.111 0.00 0.00 0.00 4.35
2791 3425 3.790437 CCGGGTGCAGATGAGCCT 61.790 66.667 0.00 0.00 0.00 4.58
2792 3426 4.101448 ACCGGGTGCAGATGAGCC 62.101 66.667 6.32 0.00 0.00 4.70
2793 3427 2.803155 TTCACCGGGTGCAGATGAGC 62.803 60.000 22.42 0.00 32.98 4.26
2794 3428 1.021390 GTTCACCGGGTGCAGATGAG 61.021 60.000 22.42 0.00 32.98 2.90
2795 3429 1.003839 GTTCACCGGGTGCAGATGA 60.004 57.895 22.42 0.66 32.98 2.92
2796 3430 1.300971 CTGTTCACCGGGTGCAGATG 61.301 60.000 22.84 9.75 32.98 2.90
2797 3431 1.003355 CTGTTCACCGGGTGCAGAT 60.003 57.895 22.84 0.00 32.98 2.90
2798 3432 1.691195 TTCTGTTCACCGGGTGCAGA 61.691 55.000 24.72 24.72 33.33 4.26
2799 3433 0.606401 ATTCTGTTCACCGGGTGCAG 60.606 55.000 22.42 22.07 32.98 4.41
2800 3434 0.179004 AATTCTGTTCACCGGGTGCA 60.179 50.000 22.42 14.04 32.98 4.57
2801 3435 0.521735 GAATTCTGTTCACCGGGTGC 59.478 55.000 22.42 9.95 32.98 5.01
2802 3436 1.890876 TGAATTCTGTTCACCGGGTG 58.109 50.000 21.27 21.27 34.45 4.61
2803 3437 2.436417 CATGAATTCTGTTCACCGGGT 58.564 47.619 6.32 0.00 0.00 5.28
2804 3438 1.745087 CCATGAATTCTGTTCACCGGG 59.255 52.381 6.32 0.00 0.00 5.73
2805 3439 1.133025 GCCATGAATTCTGTTCACCGG 59.867 52.381 7.05 0.00 0.00 5.28
2806 3440 1.811965 TGCCATGAATTCTGTTCACCG 59.188 47.619 7.05 0.00 0.00 4.94
2807 3441 3.940209 TTGCCATGAATTCTGTTCACC 57.060 42.857 7.05 0.00 0.00 4.02
2808 3442 6.424509 TCATTTTTGCCATGAATTCTGTTCAC 59.575 34.615 7.05 0.00 0.00 3.18
2809 3443 6.424509 GTCATTTTTGCCATGAATTCTGTTCA 59.575 34.615 7.05 0.00 32.37 3.18
2810 3444 6.424509 TGTCATTTTTGCCATGAATTCTGTTC 59.575 34.615 7.05 0.00 32.37 3.18
2811 3445 6.289834 TGTCATTTTTGCCATGAATTCTGTT 58.710 32.000 7.05 0.00 32.37 3.16
2812 3446 5.856156 TGTCATTTTTGCCATGAATTCTGT 58.144 33.333 7.05 0.00 32.37 3.41
2813 3447 6.788684 TTGTCATTTTTGCCATGAATTCTG 57.211 33.333 7.05 2.75 32.37 3.02
2814 3448 7.804843 TTTTGTCATTTTTGCCATGAATTCT 57.195 28.000 7.05 0.00 32.37 2.40
2815 3449 7.751793 GGATTTTGTCATTTTTGCCATGAATTC 59.248 33.333 0.00 0.00 32.37 2.17
2816 3450 7.573469 CGGATTTTGTCATTTTTGCCATGAATT 60.573 33.333 0.00 0.00 32.37 2.17
2817 3451 6.128227 CGGATTTTGTCATTTTTGCCATGAAT 60.128 34.615 0.00 0.00 32.37 2.57
2818 3452 5.178996 CGGATTTTGTCATTTTTGCCATGAA 59.821 36.000 0.00 0.00 32.37 2.57
2819 3453 4.689812 CGGATTTTGTCATTTTTGCCATGA 59.310 37.500 0.00 0.00 0.00 3.07
2820 3454 4.142859 CCGGATTTTGTCATTTTTGCCATG 60.143 41.667 0.00 0.00 0.00 3.66
2821 3455 4.002316 CCGGATTTTGTCATTTTTGCCAT 58.998 39.130 0.00 0.00 0.00 4.40
2822 3456 3.397482 CCGGATTTTGTCATTTTTGCCA 58.603 40.909 0.00 0.00 0.00 4.92
2823 3457 2.159430 GCCGGATTTTGTCATTTTTGCC 59.841 45.455 5.05 0.00 0.00 4.52
2824 3458 2.159430 GGCCGGATTTTGTCATTTTTGC 59.841 45.455 5.05 0.00 0.00 3.68
2825 3459 3.432933 CAGGCCGGATTTTGTCATTTTTG 59.567 43.478 5.05 0.00 0.00 2.44
2826 3460 3.323403 TCAGGCCGGATTTTGTCATTTTT 59.677 39.130 5.05 0.00 0.00 1.94
2827 3461 2.896685 TCAGGCCGGATTTTGTCATTTT 59.103 40.909 5.05 0.00 0.00 1.82
2828 3462 2.524306 TCAGGCCGGATTTTGTCATTT 58.476 42.857 5.05 0.00 0.00 2.32
2829 3463 2.214376 TCAGGCCGGATTTTGTCATT 57.786 45.000 5.05 0.00 0.00 2.57
2830 3464 1.818674 GTTCAGGCCGGATTTTGTCAT 59.181 47.619 5.05 0.00 0.00 3.06
2831 3465 1.243902 GTTCAGGCCGGATTTTGTCA 58.756 50.000 5.05 0.00 0.00 3.58
2832 3466 1.200020 CTGTTCAGGCCGGATTTTGTC 59.800 52.381 5.05 0.00 0.00 3.18
2833 3467 1.247567 CTGTTCAGGCCGGATTTTGT 58.752 50.000 5.05 0.00 0.00 2.83
2834 3468 1.247567 ACTGTTCAGGCCGGATTTTG 58.752 50.000 5.05 0.46 0.00 2.44
2835 3469 2.871096 TACTGTTCAGGCCGGATTTT 57.129 45.000 5.05 0.00 0.00 1.82
2836 3470 2.643551 CATACTGTTCAGGCCGGATTT 58.356 47.619 5.05 0.00 0.00 2.17
2837 3471 1.747206 GCATACTGTTCAGGCCGGATT 60.747 52.381 5.05 0.00 0.00 3.01
2838 3472 0.179045 GCATACTGTTCAGGCCGGAT 60.179 55.000 5.05 0.00 0.00 4.18
2839 3473 1.220749 GCATACTGTTCAGGCCGGA 59.779 57.895 5.05 0.00 0.00 5.14
2840 3474 0.676466 TTGCATACTGTTCAGGCCGG 60.676 55.000 0.00 0.00 0.00 6.13
2841 3475 1.135689 GTTTGCATACTGTTCAGGCCG 60.136 52.381 0.00 0.00 0.00 6.13
2842 3476 1.885887 TGTTTGCATACTGTTCAGGCC 59.114 47.619 8.78 0.00 0.00 5.19
2843 3477 2.554032 ACTGTTTGCATACTGTTCAGGC 59.446 45.455 12.78 0.00 0.00 4.85
2844 3478 5.940192 TTACTGTTTGCATACTGTTCAGG 57.060 39.130 21.10 1.98 33.15 3.86
2845 3479 6.959361 AGTTTACTGTTTGCATACTGTTCAG 58.041 36.000 21.10 7.47 33.15 3.02
2846 3480 6.935741 AGTTTACTGTTTGCATACTGTTCA 57.064 33.333 21.10 9.13 33.15 3.18
2847 3481 7.639945 AGAAGTTTACTGTTTGCATACTGTTC 58.360 34.615 21.10 13.69 33.15 3.18
2848 3482 7.282224 TGAGAAGTTTACTGTTTGCATACTGTT 59.718 33.333 21.10 6.64 33.15 3.16
2849 3483 6.765989 TGAGAAGTTTACTGTTTGCATACTGT 59.234 34.615 20.11 20.11 34.96 3.55
2850 3484 7.072030 GTGAGAAGTTTACTGTTTGCATACTG 58.928 38.462 11.61 11.61 0.00 2.74
2851 3485 6.765989 TGTGAGAAGTTTACTGTTTGCATACT 59.234 34.615 8.78 0.00 0.00 2.12
2852 3486 6.954944 TGTGAGAAGTTTACTGTTTGCATAC 58.045 36.000 0.00 0.00 0.00 2.39
2853 3487 6.989759 TCTGTGAGAAGTTTACTGTTTGCATA 59.010 34.615 0.00 0.00 0.00 3.14
2854 3488 5.822519 TCTGTGAGAAGTTTACTGTTTGCAT 59.177 36.000 0.00 0.00 0.00 3.96
2855 3489 5.182487 TCTGTGAGAAGTTTACTGTTTGCA 58.818 37.500 0.00 0.00 0.00 4.08
2856 3490 5.734855 TCTGTGAGAAGTTTACTGTTTGC 57.265 39.130 0.00 0.00 0.00 3.68
2857 3491 6.073003 GGGATCTGTGAGAAGTTTACTGTTTG 60.073 42.308 0.00 0.00 0.00 2.93
2858 3492 5.998363 GGGATCTGTGAGAAGTTTACTGTTT 59.002 40.000 0.00 0.00 0.00 2.83
2859 3493 5.071788 TGGGATCTGTGAGAAGTTTACTGTT 59.928 40.000 0.00 0.00 0.00 3.16
2860 3494 4.593206 TGGGATCTGTGAGAAGTTTACTGT 59.407 41.667 0.00 0.00 0.00 3.55
2861 3495 5.152623 TGGGATCTGTGAGAAGTTTACTG 57.847 43.478 0.00 0.00 0.00 2.74
2862 3496 5.825593 TTGGGATCTGTGAGAAGTTTACT 57.174 39.130 0.00 0.00 0.00 2.24
2863 3497 7.040409 ACAATTTGGGATCTGTGAGAAGTTTAC 60.040 37.037 0.78 0.00 0.00 2.01
2864 3498 7.004086 ACAATTTGGGATCTGTGAGAAGTTTA 58.996 34.615 0.78 0.00 0.00 2.01
2865 3499 5.835280 ACAATTTGGGATCTGTGAGAAGTTT 59.165 36.000 0.78 0.00 0.00 2.66
2866 3500 5.388654 ACAATTTGGGATCTGTGAGAAGTT 58.611 37.500 0.78 0.00 0.00 2.66
2867 3501 4.990526 ACAATTTGGGATCTGTGAGAAGT 58.009 39.130 0.78 0.00 0.00 3.01
2868 3502 5.251764 AGACAATTTGGGATCTGTGAGAAG 58.748 41.667 0.78 0.00 0.00 2.85
2869 3503 5.246981 AGACAATTTGGGATCTGTGAGAA 57.753 39.130 0.78 0.00 0.00 2.87
2870 3504 4.916041 AGACAATTTGGGATCTGTGAGA 57.084 40.909 0.78 0.00 0.00 3.27
2871 3505 5.972107 AAAGACAATTTGGGATCTGTGAG 57.028 39.130 0.78 0.00 0.00 3.51
2872 3506 6.729690 AAAAAGACAATTTGGGATCTGTGA 57.270 33.333 0.78 0.00 0.00 3.58
2901 3535 3.895232 TTGGGCATCTGAGTAGTTCTC 57.105 47.619 0.00 0.00 43.03 2.87
2902 3536 3.327757 TGTTTGGGCATCTGAGTAGTTCT 59.672 43.478 0.00 0.00 0.00 3.01
2903 3537 3.437049 GTGTTTGGGCATCTGAGTAGTTC 59.563 47.826 0.00 0.00 0.00 3.01
2904 3538 3.181445 TGTGTTTGGGCATCTGAGTAGTT 60.181 43.478 0.00 0.00 0.00 2.24
2905 3539 2.371841 TGTGTTTGGGCATCTGAGTAGT 59.628 45.455 0.00 0.00 0.00 2.73
2906 3540 3.057969 TGTGTTTGGGCATCTGAGTAG 57.942 47.619 0.00 0.00 0.00 2.57
2907 3541 3.500448 TTGTGTTTGGGCATCTGAGTA 57.500 42.857 0.00 0.00 0.00 2.59
2908 3542 2.363306 TTGTGTTTGGGCATCTGAGT 57.637 45.000 0.00 0.00 0.00 3.41
2909 3543 2.821378 TCATTGTGTTTGGGCATCTGAG 59.179 45.455 0.00 0.00 0.00 3.35
2910 3544 2.874014 TCATTGTGTTTGGGCATCTGA 58.126 42.857 0.00 0.00 0.00 3.27
2911 3545 3.663995 TTCATTGTGTTTGGGCATCTG 57.336 42.857 0.00 0.00 0.00 2.90
2912 3546 4.895668 ATTTCATTGTGTTTGGGCATCT 57.104 36.364 0.00 0.00 0.00 2.90
2913 3547 5.239087 ACAAATTTCATTGTGTTTGGGCATC 59.761 36.000 12.28 0.00 41.78 3.91
2914 3548 5.131784 ACAAATTTCATTGTGTTTGGGCAT 58.868 33.333 12.28 0.00 41.78 4.40
2915 3549 4.521146 ACAAATTTCATTGTGTTTGGGCA 58.479 34.783 12.28 0.00 41.78 5.36
2916 3550 4.574013 TGACAAATTTCATTGTGTTTGGGC 59.426 37.500 0.00 7.25 43.31 5.36
2917 3551 5.276773 CGTGACAAATTTCATTGTGTTTGGG 60.277 40.000 0.00 0.00 43.31 4.12
2918 3552 5.290643 ACGTGACAAATTTCATTGTGTTTGG 59.709 36.000 0.00 0.00 43.31 3.28
2919 3553 6.329838 ACGTGACAAATTTCATTGTGTTTG 57.670 33.333 0.00 0.00 43.31 2.93
2920 3554 7.030165 TGTACGTGACAAATTTCATTGTGTTT 58.970 30.769 0.00 0.00 43.31 2.83
2921 3555 6.556212 TGTACGTGACAAATTTCATTGTGTT 58.444 32.000 0.00 0.00 43.31 3.32
2922 3556 6.125327 TGTACGTGACAAATTTCATTGTGT 57.875 33.333 0.00 0.00 43.31 3.72
2923 3557 6.855403 TGATGTACGTGACAAATTTCATTGTG 59.145 34.615 0.00 0.00 43.31 3.33
2924 3558 6.855914 GTGATGTACGTGACAAATTTCATTGT 59.144 34.615 0.00 0.00 45.82 2.71
2925 3559 7.252070 GTGATGTACGTGACAAATTTCATTG 57.748 36.000 0.00 0.00 42.78 2.82
2941 3575 3.679980 AGATGTTCAAGTGCGTGATGTAC 59.320 43.478 0.00 0.00 0.00 2.90
2942 3576 3.925379 AGATGTTCAAGTGCGTGATGTA 58.075 40.909 0.00 0.00 0.00 2.29
2943 3577 2.738846 GAGATGTTCAAGTGCGTGATGT 59.261 45.455 0.00 0.00 0.00 3.06
2944 3578 2.094894 GGAGATGTTCAAGTGCGTGATG 59.905 50.000 0.00 0.00 0.00 3.07
2945 3579 2.350522 GGAGATGTTCAAGTGCGTGAT 58.649 47.619 0.00 0.00 0.00 3.06
2946 3580 1.608025 GGGAGATGTTCAAGTGCGTGA 60.608 52.381 0.00 0.00 0.00 4.35
2947 3581 0.798776 GGGAGATGTTCAAGTGCGTG 59.201 55.000 0.00 0.00 0.00 5.34
2948 3582 0.396435 TGGGAGATGTTCAAGTGCGT 59.604 50.000 0.00 0.00 0.00 5.24
2949 3583 0.798776 GTGGGAGATGTTCAAGTGCG 59.201 55.000 0.00 0.00 0.00 5.34
2950 3584 0.798776 CGTGGGAGATGTTCAAGTGC 59.201 55.000 0.00 0.00 0.00 4.40
2951 3585 1.442769 CCGTGGGAGATGTTCAAGTG 58.557 55.000 0.00 0.00 0.00 3.16
2952 3586 0.324943 CCCGTGGGAGATGTTCAAGT 59.675 55.000 0.00 0.00 37.50 3.16
2953 3587 0.324943 ACCCGTGGGAGATGTTCAAG 59.675 55.000 13.01 0.00 38.96 3.02
2954 3588 0.036164 CACCCGTGGGAGATGTTCAA 59.964 55.000 13.01 0.00 38.96 2.69
2955 3589 0.834261 TCACCCGTGGGAGATGTTCA 60.834 55.000 13.01 0.00 38.96 3.18
2956 3590 0.323629 TTCACCCGTGGGAGATGTTC 59.676 55.000 13.01 0.00 34.97 3.18
2957 3591 0.324943 CTTCACCCGTGGGAGATGTT 59.675 55.000 13.01 0.00 34.97 2.71
2958 3592 0.544357 TCTTCACCCGTGGGAGATGT 60.544 55.000 13.01 0.00 34.97 3.06
2959 3593 0.833287 ATCTTCACCCGTGGGAGATG 59.167 55.000 13.01 11.61 34.97 2.90
2960 3594 0.833287 CATCTTCACCCGTGGGAGAT 59.167 55.000 13.01 6.87 34.97 2.75
2961 3595 1.899437 GCATCTTCACCCGTGGGAGA 61.899 60.000 13.01 6.43 38.96 3.71
2962 3596 1.450312 GCATCTTCACCCGTGGGAG 60.450 63.158 13.01 3.53 38.96 4.30
2963 3597 2.220586 TGCATCTTCACCCGTGGGA 61.221 57.895 13.01 0.00 38.96 4.37
2964 3598 2.040544 GTGCATCTTCACCCGTGGG 61.041 63.158 2.58 2.58 42.03 4.61
2965 3599 3.578456 GTGCATCTTCACCCGTGG 58.422 61.111 0.00 0.00 0.00 4.94
2971 3605 1.028868 GCCCTCAGGTGCATCTTCAC 61.029 60.000 0.00 0.00 36.28 3.18
2972 3606 1.300963 GCCCTCAGGTGCATCTTCA 59.699 57.895 0.00 0.00 34.57 3.02
2973 3607 1.452833 GGCCCTCAGGTGCATCTTC 60.453 63.158 0.00 0.00 34.57 2.87
2974 3608 1.792757 TTGGCCCTCAGGTGCATCTT 61.793 55.000 0.00 0.00 34.57 2.40
2975 3609 1.792757 TTTGGCCCTCAGGTGCATCT 61.793 55.000 0.00 0.00 34.57 2.90
2976 3610 0.899717 TTTTGGCCCTCAGGTGCATC 60.900 55.000 0.00 0.00 34.57 3.91
2977 3611 1.155859 TTTTGGCCCTCAGGTGCAT 59.844 52.632 0.00 0.00 34.57 3.96
2978 3612 1.832167 GTTTTGGCCCTCAGGTGCA 60.832 57.895 0.00 0.00 34.57 4.57
2979 3613 1.832167 TGTTTTGGCCCTCAGGTGC 60.832 57.895 0.00 0.00 34.57 5.01
2980 3614 1.463553 GGTGTTTTGGCCCTCAGGTG 61.464 60.000 0.00 0.00 34.57 4.00
2981 3615 1.152546 GGTGTTTTGGCCCTCAGGT 60.153 57.895 0.00 0.00 34.57 4.00
2982 3616 1.908299 GGGTGTTTTGGCCCTCAGG 60.908 63.158 0.00 0.00 41.63 3.86
2983 3617 3.777556 GGGTGTTTTGGCCCTCAG 58.222 61.111 0.00 0.00 41.63 3.35
2987 3621 1.606601 GAGGAGGGTGTTTTGGCCC 60.607 63.158 0.00 0.00 45.16 5.80
2988 3622 1.606601 GGAGGAGGGTGTTTTGGCC 60.607 63.158 0.00 0.00 0.00 5.36
2989 3623 0.895559 CAGGAGGAGGGTGTTTTGGC 60.896 60.000 0.00 0.00 0.00 4.52
2990 3624 0.478507 ACAGGAGGAGGGTGTTTTGG 59.521 55.000 0.00 0.00 0.00 3.28
2991 3625 1.609208 CACAGGAGGAGGGTGTTTTG 58.391 55.000 0.00 0.00 0.00 2.44
2992 3626 0.178990 GCACAGGAGGAGGGTGTTTT 60.179 55.000 0.00 0.00 35.05 2.43
2993 3627 1.062488 AGCACAGGAGGAGGGTGTTT 61.062 55.000 0.00 0.00 35.05 2.83
2994 3628 1.062488 AAGCACAGGAGGAGGGTGTT 61.062 55.000 0.00 0.00 35.05 3.32
2995 3629 1.462238 AAGCACAGGAGGAGGGTGT 60.462 57.895 0.00 0.00 35.05 4.16
2996 3630 1.298014 GAAGCACAGGAGGAGGGTG 59.702 63.158 0.00 0.00 35.68 4.61
2997 3631 1.920835 GGAAGCACAGGAGGAGGGT 60.921 63.158 0.00 0.00 0.00 4.34
2998 3632 0.325671 TAGGAAGCACAGGAGGAGGG 60.326 60.000 0.00 0.00 0.00 4.30
2999 3633 0.827368 GTAGGAAGCACAGGAGGAGG 59.173 60.000 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.