Multiple sequence alignment - TraesCS7B01G029200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G029200 chr7B 100.000 4448 0 0 1 4448 27819149 27823596 0.000000e+00 8215.0
1 TraesCS7B01G029200 chr7B 94.737 114 5 1 3805 3917 28055724 28055837 4.570000e-40 176.0
2 TraesCS7B01G029200 chr7D 89.717 3715 215 76 156 3792 80505153 80508778 0.000000e+00 4590.0
3 TraesCS7B01G029200 chr7D 92.916 367 13 11 3436 3794 80709141 80709502 5.100000e-144 521.0
4 TraesCS7B01G029200 chr7D 94.030 335 16 2 3446 3776 80520237 80520571 5.130000e-139 505.0
5 TraesCS7B01G029200 chr7D 89.423 208 7 10 3980 4183 80509209 80509405 9.550000e-62 248.0
6 TraesCS7B01G029200 chr7D 95.575 113 5 0 3805 3917 80508896 80509008 9.830000e-42 182.0
7 TraesCS7B01G029200 chr7D 94.203 69 3 1 3915 3982 80509046 80509114 2.190000e-18 104.0
8 TraesCS7B01G029200 chr7D 89.583 48 5 0 3935 3982 80520691 80520738 1.340000e-05 62.1
9 TraesCS7B01G029200 chr7A 89.310 3405 219 69 446 3792 83284781 83288098 0.000000e+00 4137.0
10 TraesCS7B01G029200 chr5B 80.702 171 20 8 1664 1831 22811728 22811568 2.170000e-23 121.0
11 TraesCS7B01G029200 chr4A 79.070 172 31 4 4197 4366 477912485 477912317 3.640000e-21 113.0
12 TraesCS7B01G029200 chr5A 84.337 83 11 2 4094 4175 509042447 509042366 3.690000e-11 80.5
13 TraesCS7B01G029200 chr1D 80.435 92 16 2 4091 4181 413199162 413199072 7.980000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G029200 chr7B 27819149 27823596 4447 False 8215.00 8215 100.0000 1 4448 1 chr7B.!!$F1 4447
1 TraesCS7B01G029200 chr7D 80505153 80509405 4252 False 1281.00 4590 92.2295 156 4183 4 chr7D.!!$F2 4027
2 TraesCS7B01G029200 chr7D 80520237 80520738 501 False 283.55 505 91.8065 3446 3982 2 chr7D.!!$F3 536
3 TraesCS7B01G029200 chr7A 83284781 83288098 3317 False 4137.00 4137 89.3100 446 3792 1 chr7A.!!$F1 3346

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
560 585 0.034896 AGCCCAAACAGTACTCCACG 59.965 55.0 0.0 0.0 0.00 4.94 F
1274 1345 0.038599 TGTACTAGACGAGGGTGCCA 59.961 55.0 0.0 0.0 0.00 4.92 F
1937 2030 0.176680 ATGGCTCTCAGGTTACTGCG 59.823 55.0 0.0 0.0 44.54 5.18 F
2417 2522 0.970640 TCGGCTTACACCAGCAGTTA 59.029 50.0 0.0 0.0 42.10 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1623 1698 0.178992 ACACCAGGGGACAATGTGTG 60.179 55.0 0.0 0.0 37.25 3.82 R
3141 3247 0.475044 TACCCTCTTTTGCCAACGGT 59.525 50.0 0.0 0.0 0.00 4.83 R
3420 3526 0.106868 CAGCCAGCCCTTCATCATCA 60.107 55.0 0.0 0.0 0.00 3.07 R
4047 4420 0.037697 AACGACGCTATGTGCCTTGA 60.038 50.0 0.0 0.0 38.78 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 1.616159 TTTTGCAACCACCCTAGAGC 58.384 50.000 0.00 0.00 0.00 4.09
36 37 0.771127 TTTGCAACCACCCTAGAGCT 59.229 50.000 0.00 0.00 0.00 4.09
37 38 1.651737 TTGCAACCACCCTAGAGCTA 58.348 50.000 0.00 0.00 0.00 3.32
38 39 1.651737 TGCAACCACCCTAGAGCTAA 58.348 50.000 0.00 0.00 0.00 3.09
39 40 1.278127 TGCAACCACCCTAGAGCTAAC 59.722 52.381 0.00 0.00 0.00 2.34
40 41 1.555533 GCAACCACCCTAGAGCTAACT 59.444 52.381 0.00 0.00 0.00 2.24
41 42 2.764572 GCAACCACCCTAGAGCTAACTA 59.235 50.000 0.00 0.00 0.00 2.24
42 43 3.181474 GCAACCACCCTAGAGCTAACTAG 60.181 52.174 3.03 3.03 39.40 2.57
43 44 4.024670 CAACCACCCTAGAGCTAACTAGT 58.975 47.826 8.27 0.00 38.41 2.57
44 45 3.633418 ACCACCCTAGAGCTAACTAGTG 58.367 50.000 0.00 4.25 38.41 2.74
45 46 2.959707 CCACCCTAGAGCTAACTAGTGG 59.040 54.545 9.54 9.54 38.41 4.00
46 47 2.959707 CACCCTAGAGCTAACTAGTGGG 59.040 54.545 8.70 8.70 38.41 4.61
47 48 1.964933 CCCTAGAGCTAACTAGTGGGC 59.035 57.143 11.07 11.07 38.41 5.36
48 49 2.425102 CCCTAGAGCTAACTAGTGGGCT 60.425 54.545 18.76 18.76 38.41 5.19
49 50 3.181431 CCCTAGAGCTAACTAGTGGGCTA 60.181 52.174 18.73 7.44 38.41 3.93
50 51 3.822167 CCTAGAGCTAACTAGTGGGCTAC 59.178 52.174 18.73 13.51 38.41 3.58
51 52 2.668625 AGAGCTAACTAGTGGGCTACC 58.331 52.381 18.73 10.36 35.01 3.18
52 53 2.024273 AGAGCTAACTAGTGGGCTACCA 60.024 50.000 18.73 0.00 46.94 3.25
63 64 3.087065 GCTACCAGCCCCTTTCCA 58.913 61.111 0.00 0.00 34.48 3.53
64 65 1.382629 GCTACCAGCCCCTTTCCAA 59.617 57.895 0.00 0.00 34.48 3.53
65 66 0.251608 GCTACCAGCCCCTTTCCAAA 60.252 55.000 0.00 0.00 34.48 3.28
66 67 1.839424 CTACCAGCCCCTTTCCAAAG 58.161 55.000 0.00 0.00 35.79 2.77
67 68 1.075536 CTACCAGCCCCTTTCCAAAGT 59.924 52.381 0.00 0.00 34.20 2.66
68 69 0.264657 ACCAGCCCCTTTCCAAAGTT 59.735 50.000 0.00 0.00 34.20 2.66
69 70 1.501604 ACCAGCCCCTTTCCAAAGTTA 59.498 47.619 0.00 0.00 34.20 2.24
70 71 1.893137 CCAGCCCCTTTCCAAAGTTAC 59.107 52.381 0.00 0.00 34.20 2.50
71 72 1.893137 CAGCCCCTTTCCAAAGTTACC 59.107 52.381 0.00 0.00 34.20 2.85
72 73 1.501604 AGCCCCTTTCCAAAGTTACCA 59.498 47.619 0.00 0.00 34.20 3.25
73 74 2.111792 AGCCCCTTTCCAAAGTTACCAT 59.888 45.455 0.00 0.00 34.20 3.55
74 75 2.496070 GCCCCTTTCCAAAGTTACCATC 59.504 50.000 0.00 0.00 34.20 3.51
75 76 3.773560 CCCCTTTCCAAAGTTACCATCA 58.226 45.455 0.00 0.00 34.20 3.07
76 77 4.156477 CCCCTTTCCAAAGTTACCATCAA 58.844 43.478 0.00 0.00 34.20 2.57
77 78 4.777366 CCCCTTTCCAAAGTTACCATCAAT 59.223 41.667 0.00 0.00 34.20 2.57
78 79 5.955355 CCCCTTTCCAAAGTTACCATCAATA 59.045 40.000 0.00 0.00 34.20 1.90
79 80 6.611236 CCCCTTTCCAAAGTTACCATCAATAT 59.389 38.462 0.00 0.00 34.20 1.28
80 81 7.782644 CCCCTTTCCAAAGTTACCATCAATATA 59.217 37.037 0.00 0.00 34.20 0.86
81 82 9.196139 CCCTTTCCAAAGTTACCATCAATATAA 57.804 33.333 0.00 0.00 34.20 0.98
109 110 8.865090 TCTGAGTAGATCTATTTTGAGGATTCC 58.135 37.037 5.57 0.00 0.00 3.01
110 111 8.789767 TGAGTAGATCTATTTTGAGGATTCCT 57.210 34.615 4.44 4.44 36.03 3.36
111 112 9.218525 TGAGTAGATCTATTTTGAGGATTCCTT 57.781 33.333 6.68 0.00 31.76 3.36
119 120 9.020731 TCTATTTTGAGGATTCCTTTTGTAACC 57.979 33.333 6.68 0.00 31.76 2.85
120 121 6.413783 TTTTGAGGATTCCTTTTGTAACCC 57.586 37.500 6.68 0.00 31.76 4.11
121 122 4.733077 TGAGGATTCCTTTTGTAACCCA 57.267 40.909 6.68 0.00 31.76 4.51
122 123 5.269554 TGAGGATTCCTTTTGTAACCCAT 57.730 39.130 6.68 0.00 31.76 4.00
123 124 6.395780 TGAGGATTCCTTTTGTAACCCATA 57.604 37.500 6.68 0.00 31.76 2.74
124 125 6.184789 TGAGGATTCCTTTTGTAACCCATAC 58.815 40.000 6.68 0.00 31.76 2.39
125 126 5.516044 AGGATTCCTTTTGTAACCCATACC 58.484 41.667 0.00 0.00 33.27 2.73
126 127 5.015817 AGGATTCCTTTTGTAACCCATACCA 59.984 40.000 0.00 0.00 33.27 3.25
127 128 5.717654 GGATTCCTTTTGTAACCCATACCAA 59.282 40.000 0.00 0.00 33.27 3.67
128 129 6.211785 GGATTCCTTTTGTAACCCATACCAAA 59.788 38.462 0.00 0.00 33.27 3.28
129 130 6.408107 TTCCTTTTGTAACCCATACCAAAC 57.592 37.500 0.00 0.00 33.27 2.93
130 131 4.833938 TCCTTTTGTAACCCATACCAAACC 59.166 41.667 0.00 0.00 33.27 3.27
131 132 4.589374 CCTTTTGTAACCCATACCAAACCA 59.411 41.667 0.00 0.00 33.27 3.67
132 133 5.279256 CCTTTTGTAACCCATACCAAACCAG 60.279 44.000 0.00 0.00 33.27 4.00
133 134 2.797786 TGTAACCCATACCAAACCAGC 58.202 47.619 0.00 0.00 33.27 4.85
134 135 1.741145 GTAACCCATACCAAACCAGCG 59.259 52.381 0.00 0.00 0.00 5.18
135 136 0.111639 AACCCATACCAAACCAGCGT 59.888 50.000 0.00 0.00 0.00 5.07
136 137 0.111639 ACCCATACCAAACCAGCGTT 59.888 50.000 0.00 0.00 0.00 4.84
137 138 1.253100 CCCATACCAAACCAGCGTTT 58.747 50.000 0.00 0.00 43.09 3.60
138 139 2.224818 ACCCATACCAAACCAGCGTTTA 60.225 45.455 0.00 0.00 40.28 2.01
139 140 2.162809 CCCATACCAAACCAGCGTTTAC 59.837 50.000 0.00 0.00 40.28 2.01
140 141 2.814919 CCATACCAAACCAGCGTTTACA 59.185 45.455 0.00 0.00 40.28 2.41
141 142 3.253677 CCATACCAAACCAGCGTTTACAA 59.746 43.478 0.00 0.00 40.28 2.41
142 143 4.082463 CCATACCAAACCAGCGTTTACAAT 60.082 41.667 0.00 0.00 40.28 2.71
143 144 3.636282 ACCAAACCAGCGTTTACAATC 57.364 42.857 0.00 0.00 40.28 2.67
144 145 2.952978 ACCAAACCAGCGTTTACAATCA 59.047 40.909 0.00 0.00 40.28 2.57
145 146 3.004315 ACCAAACCAGCGTTTACAATCAG 59.996 43.478 0.00 0.00 40.28 2.90
146 147 3.004315 CCAAACCAGCGTTTACAATCAGT 59.996 43.478 0.00 0.00 40.28 3.41
147 148 4.499019 CCAAACCAGCGTTTACAATCAGTT 60.499 41.667 0.00 0.00 40.28 3.16
148 149 4.911514 AACCAGCGTTTACAATCAGTTT 57.088 36.364 0.00 0.00 0.00 2.66
149 150 6.202937 CAAACCAGCGTTTACAATCAGTTTA 58.797 36.000 0.00 0.00 40.28 2.01
150 151 6.569179 AACCAGCGTTTACAATCAGTTTAT 57.431 33.333 0.00 0.00 0.00 1.40
151 152 6.569179 ACCAGCGTTTACAATCAGTTTATT 57.431 33.333 0.00 0.00 0.00 1.40
152 153 6.977213 ACCAGCGTTTACAATCAGTTTATTT 58.023 32.000 0.00 0.00 0.00 1.40
153 154 6.861055 ACCAGCGTTTACAATCAGTTTATTTG 59.139 34.615 0.00 0.00 0.00 2.32
154 155 6.307800 CCAGCGTTTACAATCAGTTTATTTGG 59.692 38.462 0.00 0.00 0.00 3.28
155 156 7.081349 CAGCGTTTACAATCAGTTTATTTGGA 58.919 34.615 0.00 0.00 0.00 3.53
156 157 7.754924 CAGCGTTTACAATCAGTTTATTTGGAT 59.245 33.333 0.00 0.00 0.00 3.41
157 158 7.754924 AGCGTTTACAATCAGTTTATTTGGATG 59.245 33.333 0.00 0.00 0.00 3.51
158 159 7.009174 GCGTTTACAATCAGTTTATTTGGATGG 59.991 37.037 0.00 0.00 0.00 3.51
159 160 8.240682 CGTTTACAATCAGTTTATTTGGATGGA 58.759 33.333 0.00 0.00 0.00 3.41
160 161 9.921637 GTTTACAATCAGTTTATTTGGATGGAA 57.078 29.630 0.00 0.00 0.00 3.53
161 162 9.921637 TTTACAATCAGTTTATTTGGATGGAAC 57.078 29.630 0.00 0.00 0.00 3.62
191 192 2.287970 GGCCGGAAAGAAACGTGAAAAT 60.288 45.455 5.05 0.00 0.00 1.82
209 210 4.785669 AAATCACGCTCTGAATCGAATC 57.214 40.909 6.08 0.00 30.60 2.52
211 212 1.400494 TCACGCTCTGAATCGAATCGA 59.600 47.619 8.12 8.12 41.13 3.59
224 225 1.668419 GAATCGATTGGGTCCCACTG 58.332 55.000 16.96 3.25 30.78 3.66
229 230 1.228862 ATTGGGTCCCACTGCAACC 60.229 57.895 11.24 0.00 30.78 3.77
235 236 0.321298 GTCCCACTGCAACCGTACAT 60.321 55.000 0.00 0.00 0.00 2.29
238 239 1.338294 CCCACTGCAACCGTACATACA 60.338 52.381 0.00 0.00 0.00 2.29
239 240 1.730064 CCACTGCAACCGTACATACAC 59.270 52.381 0.00 0.00 0.00 2.90
240 241 2.409012 CACTGCAACCGTACATACACA 58.591 47.619 0.00 0.00 0.00 3.72
241 242 3.000041 CACTGCAACCGTACATACACAT 59.000 45.455 0.00 0.00 0.00 3.21
242 243 3.062099 CACTGCAACCGTACATACACATC 59.938 47.826 0.00 0.00 0.00 3.06
243 244 3.056107 ACTGCAACCGTACATACACATCT 60.056 43.478 0.00 0.00 0.00 2.90
244 245 3.517602 TGCAACCGTACATACACATCTC 58.482 45.455 0.00 0.00 0.00 2.75
245 246 3.056465 TGCAACCGTACATACACATCTCA 60.056 43.478 0.00 0.00 0.00 3.27
246 247 4.119862 GCAACCGTACATACACATCTCAT 58.880 43.478 0.00 0.00 0.00 2.90
247 248 4.025730 GCAACCGTACATACACATCTCATG 60.026 45.833 0.00 0.00 0.00 3.07
248 249 4.322080 ACCGTACATACACATCTCATGG 57.678 45.455 0.00 0.00 33.60 3.66
249 250 3.704566 ACCGTACATACACATCTCATGGT 59.295 43.478 0.00 0.00 33.60 3.55
307 309 0.537143 TTGATGAGGCCCACACACAC 60.537 55.000 0.00 0.00 0.00 3.82
319 325 4.502259 GCCCACACACACAATAATCCAAAA 60.502 41.667 0.00 0.00 0.00 2.44
320 326 5.792741 CCCACACACACAATAATCCAAAAT 58.207 37.500 0.00 0.00 0.00 1.82
323 329 7.875041 CCCACACACACAATAATCCAAAATAAA 59.125 33.333 0.00 0.00 0.00 1.40
324 330 8.707839 CCACACACACAATAATCCAAAATAAAC 58.292 33.333 0.00 0.00 0.00 2.01
328 334 9.487790 ACACACAATAATCCAAAATAAACAAGG 57.512 29.630 0.00 0.00 0.00 3.61
329 335 8.934825 CACACAATAATCCAAAATAAACAAGGG 58.065 33.333 0.00 0.00 0.00 3.95
330 336 7.606073 ACACAATAATCCAAAATAAACAAGGGC 59.394 33.333 0.00 0.00 0.00 5.19
331 337 7.605691 CACAATAATCCAAAATAAACAAGGGCA 59.394 33.333 0.00 0.00 0.00 5.36
332 338 8.160106 ACAATAATCCAAAATAAACAAGGGCAA 58.840 29.630 0.00 0.00 0.00 4.52
333 339 9.176460 CAATAATCCAAAATAAACAAGGGCAAT 57.824 29.630 0.00 0.00 0.00 3.56
363 369 5.774498 AAAAACAAAACAAAACAAGGGCA 57.226 30.435 0.00 0.00 0.00 5.36
364 370 5.973899 AAAACAAAACAAAACAAGGGCAT 57.026 30.435 0.00 0.00 0.00 4.40
365 371 5.559427 AAACAAAACAAAACAAGGGCATC 57.441 34.783 0.00 0.00 0.00 3.91
366 372 4.213564 ACAAAACAAAACAAGGGCATCA 57.786 36.364 0.00 0.00 0.00 3.07
384 390 1.202557 TCACACCGTACCAGTCCAAAC 60.203 52.381 0.00 0.00 0.00 2.93
385 391 1.125633 ACACCGTACCAGTCCAAACT 58.874 50.000 0.00 0.00 35.60 2.66
387 393 2.140717 CACCGTACCAGTCCAAACTTC 58.859 52.381 0.00 0.00 31.71 3.01
390 398 3.064931 CCGTACCAGTCCAAACTTCTTC 58.935 50.000 0.00 0.00 31.71 2.87
395 403 4.610333 ACCAGTCCAAACTTCTTCCTTTT 58.390 39.130 0.00 0.00 31.71 2.27
396 404 5.023452 ACCAGTCCAAACTTCTTCCTTTTT 58.977 37.500 0.00 0.00 31.71 1.94
408 421 4.509616 TCTTCCTTTTTATGATTCGCGGA 58.490 39.130 6.13 0.00 0.00 5.54
417 430 7.561237 TTTTATGATTCGCGGAAAAGAAAAG 57.439 32.000 6.13 0.00 0.00 2.27
427 440 2.693250 AAAAGAAAAGCGCCGCACCC 62.693 55.000 13.36 0.00 0.00 4.61
501 515 0.953960 GCCGACCGGAGTCAACAATT 60.954 55.000 9.46 0.00 43.73 2.32
521 540 3.410631 TCGGTTAGAATGGAAAGTGCA 57.589 42.857 0.00 0.00 0.00 4.57
522 541 3.071479 TCGGTTAGAATGGAAAGTGCAC 58.929 45.455 9.40 9.40 0.00 4.57
523 542 2.159707 CGGTTAGAATGGAAAGTGCACG 60.160 50.000 12.01 0.00 0.00 5.34
525 544 1.075542 TAGAATGGAAAGTGCACGCG 58.924 50.000 12.01 3.53 0.00 6.01
526 545 0.884704 AGAATGGAAAGTGCACGCGT 60.885 50.000 5.58 5.58 0.00 6.01
527 546 0.452784 GAATGGAAAGTGCACGCGTC 60.453 55.000 9.86 9.89 0.00 5.19
528 547 1.852067 AATGGAAAGTGCACGCGTCC 61.852 55.000 22.39 22.39 0.00 4.79
529 548 3.723348 GGAAAGTGCACGCGTCCC 61.723 66.667 9.86 3.70 0.00 4.46
530 549 3.723348 GAAAGTGCACGCGTCCCC 61.723 66.667 9.86 0.62 0.00 4.81
531 550 4.250305 AAAGTGCACGCGTCCCCT 62.250 61.111 9.86 0.00 0.00 4.79
532 551 4.988598 AAGTGCACGCGTCCCCTG 62.989 66.667 9.86 0.00 0.00 4.45
560 585 0.034896 AGCCCAAACAGTACTCCACG 59.965 55.000 0.00 0.00 0.00 4.94
832 887 3.039526 CTCCTCCCCCTCCCCTCT 61.040 72.222 0.00 0.00 0.00 3.69
851 906 4.954118 TCGCCCACCAGTCCACCT 62.954 66.667 0.00 0.00 0.00 4.00
852 907 3.953775 CGCCCACCAGTCCACCTT 61.954 66.667 0.00 0.00 0.00 3.50
900 955 2.636412 CCTCCAAGCGACGACTCCA 61.636 63.158 0.00 0.00 0.00 3.86
908 963 1.739338 GCGACGACTCCATCCATCCT 61.739 60.000 0.00 0.00 0.00 3.24
1117 1185 1.178534 CCTTCCCCGCTTTTGCTTCA 61.179 55.000 0.00 0.00 44.80 3.02
1134 1203 2.847234 AACTGGGTGGGCTCGTCA 60.847 61.111 0.00 0.00 0.00 4.35
1209 1280 0.109226 AGTTCGCTCGCTCTAACCAC 60.109 55.000 0.00 0.00 0.00 4.16
1225 1296 1.969064 CACGGTGGGAATTTCGCCA 60.969 57.895 10.57 6.74 34.65 5.69
1226 1297 1.969589 ACGGTGGGAATTTCGCCAC 60.970 57.895 20.27 20.27 37.15 5.01
1230 1301 3.822192 GGGAATTTCGCCACGCCC 61.822 66.667 2.16 0.00 0.00 6.13
1234 1305 3.961838 AATTTCGCCACGCCCGCTA 62.962 57.895 0.00 0.00 0.00 4.26
1258 1329 2.022195 CGCTAGTCTGGCTAGGTTGTA 58.978 52.381 17.34 0.00 45.61 2.41
1262 1333 4.276431 GCTAGTCTGGCTAGGTTGTACTAG 59.724 50.000 17.34 14.78 45.61 2.57
1263 1334 4.587976 AGTCTGGCTAGGTTGTACTAGA 57.412 45.455 0.00 0.00 42.40 2.43
1274 1345 0.038599 TGTACTAGACGAGGGTGCCA 59.961 55.000 0.00 0.00 0.00 4.92
1326 1397 2.202479 GCGGTGCTCAATTTCGCC 60.202 61.111 0.00 0.00 40.44 5.54
1362 1434 1.202952 TCGGCCTGGTTTGGTTTGTAT 60.203 47.619 0.00 0.00 0.00 2.29
1405 1478 1.446366 GTCGGGACTGGGGAATAGC 59.554 63.158 0.00 0.00 0.00 2.97
1408 1481 1.338136 CGGGACTGGGGAATAGCTGT 61.338 60.000 0.00 0.00 0.00 4.40
1410 1483 1.408822 GGGACTGGGGAATAGCTGTTG 60.409 57.143 0.00 0.00 0.00 3.33
1440 1513 2.315925 TTGGGTGCGAATCTCATCTC 57.684 50.000 0.00 0.00 0.00 2.75
1470 1543 4.336932 GTCCAAAACGTGTTGTGTTAGTC 58.663 43.478 17.06 0.00 0.00 2.59
1517 1592 4.273148 TGTTTAAGCCCTCTTGTCTCTC 57.727 45.455 0.00 0.00 33.85 3.20
1590 1665 8.065473 AGTCTATTATGCTCTCATATGGACAG 57.935 38.462 2.13 0.00 35.30 3.51
1609 1684 4.070009 ACAGTAGAACCGAAAATTGGGAC 58.930 43.478 0.89 0.00 0.00 4.46
1620 1695 5.277828 CCGAAAATTGGGACGGAATCTTATC 60.278 44.000 0.00 0.00 46.94 1.75
1623 1698 4.625607 ATTGGGACGGAATCTTATCTCC 57.374 45.455 0.00 0.00 0.00 3.71
1627 1702 3.492829 GGGACGGAATCTTATCTCCACAC 60.493 52.174 0.00 0.00 0.00 3.82
1634 1709 5.529060 GGAATCTTATCTCCACACATTGTCC 59.471 44.000 0.00 0.00 0.00 4.02
1647 1722 1.633432 CATTGTCCCCTGGTGTTCCTA 59.367 52.381 0.00 0.00 34.23 2.94
1654 1729 4.165372 GTCCCCTGGTGTTCCTATGATTTA 59.835 45.833 0.00 0.00 34.23 1.40
1655 1730 4.412199 TCCCCTGGTGTTCCTATGATTTAG 59.588 45.833 0.00 0.00 34.23 1.85
1657 1732 4.166144 CCCTGGTGTTCCTATGATTTAGGT 59.834 45.833 0.00 0.00 36.16 3.08
1658 1733 5.126067 CCTGGTGTTCCTATGATTTAGGTG 58.874 45.833 0.00 0.00 36.16 4.00
1660 1735 6.134535 TGGTGTTCCTATGATTTAGGTGTT 57.865 37.500 0.00 0.00 36.16 3.32
1661 1736 6.177610 TGGTGTTCCTATGATTTAGGTGTTC 58.822 40.000 0.00 0.00 36.16 3.18
1723 1813 4.410883 TCAGTGGAAAGGGAACTAACTTGA 59.589 41.667 0.00 0.00 42.68 3.02
1724 1814 5.073144 TCAGTGGAAAGGGAACTAACTTGAT 59.927 40.000 0.00 0.00 42.68 2.57
1726 1816 4.392138 GTGGAAAGGGAACTAACTTGATCG 59.608 45.833 0.00 0.00 42.68 3.69
1731 1821 2.930682 GGGAACTAACTTGATCGTCTGC 59.069 50.000 0.00 0.00 0.00 4.26
1733 1823 4.142227 GGGAACTAACTTGATCGTCTGCTA 60.142 45.833 0.00 0.00 0.00 3.49
1737 1827 2.285827 ACTTGATCGTCTGCTACTGC 57.714 50.000 0.00 0.00 40.20 4.40
1754 1844 5.122869 GCTACTGCAATTGAAGAGTTCATGA 59.877 40.000 20.85 0.00 38.14 3.07
1762 1852 7.201758 GCAATTGAAGAGTTCATGATCACCATA 60.202 37.037 10.34 0.00 39.84 2.74
1764 1854 8.991783 ATTGAAGAGTTCATGATCACCATATT 57.008 30.769 0.00 0.00 39.84 1.28
1765 1855 8.442632 TTGAAGAGTTCATGATCACCATATTC 57.557 34.615 0.00 0.00 39.84 1.75
1766 1856 7.567458 TGAAGAGTTCATGATCACCATATTCA 58.433 34.615 0.00 0.72 34.08 2.57
1768 1858 7.981102 AGAGTTCATGATCACCATATTCATG 57.019 36.000 0.00 7.68 45.15 3.07
1777 1870 7.988737 TGATCACCATATTCATGACTTTGTTC 58.011 34.615 0.00 0.00 33.67 3.18
1937 2030 0.176680 ATGGCTCTCAGGTTACTGCG 59.823 55.000 0.00 0.00 44.54 5.18
2065 2169 8.842358 AGTAGTTTATTGCTTTACTTGCACTA 57.158 30.769 0.00 0.00 40.40 2.74
2192 2297 5.558818 TCGTTAGGTAGGATATCCTCTCAC 58.441 45.833 27.86 19.49 44.77 3.51
2222 2327 5.526111 GGTCAACTTAGACAACTTGCTACAA 59.474 40.000 0.00 0.00 40.29 2.41
2223 2328 6.204882 GGTCAACTTAGACAACTTGCTACAAT 59.795 38.462 0.00 0.00 40.29 2.71
2224 2329 7.072030 GTCAACTTAGACAACTTGCTACAATG 58.928 38.462 0.00 0.00 38.40 2.82
2225 2330 5.613358 ACTTAGACAACTTGCTACAATGC 57.387 39.130 0.00 0.00 0.00 3.56
2226 2331 5.308825 ACTTAGACAACTTGCTACAATGCT 58.691 37.500 0.00 0.00 0.00 3.79
2227 2332 6.464222 ACTTAGACAACTTGCTACAATGCTA 58.536 36.000 0.00 0.00 0.00 3.49
2228 2333 6.369065 ACTTAGACAACTTGCTACAATGCTAC 59.631 38.462 0.00 0.00 0.00 3.58
2229 2334 4.641396 AGACAACTTGCTACAATGCTACA 58.359 39.130 0.00 0.00 0.00 2.74
2248 2353 5.007724 GCTACAGGTTTGCAAGTATACATCC 59.992 44.000 5.50 0.00 0.00 3.51
2354 2459 5.046591 TCACTCACTGACCACCCTAAAATAG 60.047 44.000 0.00 0.00 0.00 1.73
2355 2460 4.192317 CTCACTGACCACCCTAAAATAGC 58.808 47.826 0.00 0.00 0.00 2.97
2360 2465 6.205464 CACTGACCACCCTAAAATAGCATATG 59.795 42.308 0.00 0.00 0.00 1.78
2362 2467 6.061441 TGACCACCCTAAAATAGCATATGTG 58.939 40.000 4.29 0.00 0.00 3.21
2391 2496 4.695455 GTGCATTAGTTCTGCTCTTACCAA 59.305 41.667 0.00 0.00 40.34 3.67
2395 2500 6.621596 GCATTAGTTCTGCTCTTACCAAGTTG 60.622 42.308 0.00 0.00 36.68 3.16
2396 2501 3.744660 AGTTCTGCTCTTACCAAGTTGG 58.255 45.455 20.76 20.76 45.02 3.77
2400 2505 1.079503 GCTCTTACCAAGTTGGCTCG 58.920 55.000 22.25 9.92 42.67 5.03
2411 2516 1.003839 TTGGCTCGGCTTACACCAG 60.004 57.895 0.00 0.00 0.00 4.00
2412 2517 2.820037 GGCTCGGCTTACACCAGC 60.820 66.667 0.00 0.00 39.28 4.85
2417 2522 0.970640 TCGGCTTACACCAGCAGTTA 59.029 50.000 0.00 0.00 42.10 2.24
2518 2624 3.587797 ATGGAATTTGCTGCAGAAGTG 57.412 42.857 20.43 0.00 0.00 3.16
2685 2791 2.859273 CTTGACTGGCGGCGGAGAAT 62.859 60.000 26.40 0.51 0.00 2.40
2686 2792 2.892425 GACTGGCGGCGGAGAATG 60.892 66.667 26.40 0.79 0.00 2.67
2702 2808 5.624281 CGGAGAATGTTTATTGCCATTGGTT 60.624 40.000 4.26 0.00 31.67 3.67
2735 2841 1.774639 TGCGTGAGTAAACGTCTTCC 58.225 50.000 0.00 0.00 45.32 3.46
2738 2844 2.798847 GCGTGAGTAAACGTCTTCCTTT 59.201 45.455 0.00 0.00 45.32 3.11
2740 2846 4.758561 CGTGAGTAAACGTCTTCCTTTTG 58.241 43.478 0.00 0.00 38.74 2.44
2741 2847 4.269363 CGTGAGTAAACGTCTTCCTTTTGT 59.731 41.667 0.00 0.00 38.74 2.83
2847 2953 1.072173 CTTCACCACCATGAGACACCA 59.928 52.381 0.00 0.00 0.00 4.17
2848 2954 1.135960 TCACCACCATGAGACACCAA 58.864 50.000 0.00 0.00 0.00 3.67
3054 3160 3.057969 TGTGATGTCTACAGCTTTGGG 57.942 47.619 0.00 0.00 32.67 4.12
3141 3247 1.675219 GGTCCGAAACTGGGTGCTA 59.325 57.895 0.00 0.00 0.00 3.49
3150 3256 3.545124 CTGGGTGCTACCGTTGGCA 62.545 63.158 0.00 0.00 39.83 4.92
3174 3280 7.012421 GCAAAAGAGGGTAGATACGATGAAATT 59.988 37.037 0.00 0.00 0.00 1.82
3237 3343 3.628646 AAGGGTGGTGCTGATCGGC 62.629 63.158 20.08 20.08 0.00 5.54
3264 3370 2.022129 CACGCACAGAGAACCCGAC 61.022 63.158 0.00 0.00 0.00 4.79
3375 3481 2.028130 CCAGACTCGATGGCTAGTTCT 58.972 52.381 0.00 0.00 28.96 3.01
3419 3525 2.742053 GCACCGACTGCATTCTTAAGAA 59.258 45.455 19.83 19.83 46.29 2.52
3420 3526 3.375299 GCACCGACTGCATTCTTAAGAAT 59.625 43.478 22.43 22.43 46.29 2.40
3488 3603 4.528596 CCCTAGGTATTGGTAGAGTGGATG 59.471 50.000 8.29 0.00 0.00 3.51
3706 3823 2.779755 TCCTGTTGTCACTGTGTTGT 57.220 45.000 7.79 0.00 0.00 3.32
3733 3850 5.048713 ACTCTAAACAAAATTTCCTCCTGCG 60.049 40.000 0.00 0.00 0.00 5.18
3792 3916 2.912956 TCCTTGACAATAAGCCCTCTGT 59.087 45.455 0.00 0.00 0.00 3.41
3795 3919 4.323485 CCTTGACAATAAGCCCTCTGTACA 60.323 45.833 0.00 0.00 0.00 2.90
3800 3924 4.141620 ACAATAAGCCCTCTGTACATCTGG 60.142 45.833 0.00 0.00 0.00 3.86
3801 3925 1.207791 AAGCCCTCTGTACATCTGGG 58.792 55.000 18.32 18.32 40.74 4.45
3802 3926 0.339859 AGCCCTCTGTACATCTGGGA 59.660 55.000 23.82 6.82 40.23 4.37
3837 4066 5.841237 TGTAAGAAGCTCTGCCTATCCTATT 59.159 40.000 0.00 0.00 0.00 1.73
3840 4069 4.285775 AGAAGCTCTGCCTATCCTATTTCC 59.714 45.833 0.00 0.00 0.00 3.13
3853 4082 7.768120 CCTATCCTATTTCCTGCTATCATGTTC 59.232 40.741 0.00 0.00 0.00 3.18
3928 4197 7.148239 CGCAGAATTTAGGGTAGTGAAAAAGAT 60.148 37.037 0.00 0.00 0.00 2.40
4120 4495 0.533032 ACAGCTCTACGCCTTTCCTC 59.467 55.000 0.00 0.00 40.39 3.71
4123 4498 0.533032 GCTCTACGCCTTTCCTCAGT 59.467 55.000 0.00 0.00 0.00 3.41
4183 4558 5.376625 TGGCATTCCTATGAACCTGTTATC 58.623 41.667 0.00 0.00 33.37 1.75
4184 4559 5.132648 TGGCATTCCTATGAACCTGTTATCT 59.867 40.000 0.00 0.00 33.37 1.98
4185 4560 5.703130 GGCATTCCTATGAACCTGTTATCTC 59.297 44.000 0.00 0.00 33.37 2.75
4186 4561 5.703130 GCATTCCTATGAACCTGTTATCTCC 59.297 44.000 0.00 0.00 33.37 3.71
4187 4562 6.688922 GCATTCCTATGAACCTGTTATCTCCA 60.689 42.308 0.00 0.00 33.37 3.86
4188 4563 7.456725 CATTCCTATGAACCTGTTATCTCCAT 58.543 38.462 0.00 0.00 33.37 3.41
4189 4564 6.672266 TCCTATGAACCTGTTATCTCCATC 57.328 41.667 0.00 0.00 0.00 3.51
4190 4565 6.385443 TCCTATGAACCTGTTATCTCCATCT 58.615 40.000 0.00 0.00 0.00 2.90
4191 4566 6.495181 TCCTATGAACCTGTTATCTCCATCTC 59.505 42.308 0.00 0.00 0.00 2.75
4192 4567 5.559148 ATGAACCTGTTATCTCCATCTCC 57.441 43.478 0.00 0.00 0.00 3.71
4193 4568 3.384789 TGAACCTGTTATCTCCATCTCCG 59.615 47.826 0.00 0.00 0.00 4.63
4194 4569 1.689273 ACCTGTTATCTCCATCTCCGC 59.311 52.381 0.00 0.00 0.00 5.54
4195 4570 1.688735 CCTGTTATCTCCATCTCCGCA 59.311 52.381 0.00 0.00 0.00 5.69
4196 4571 2.103094 CCTGTTATCTCCATCTCCGCAA 59.897 50.000 0.00 0.00 0.00 4.85
4197 4572 3.126831 CTGTTATCTCCATCTCCGCAAC 58.873 50.000 0.00 0.00 0.00 4.17
4198 4573 2.766263 TGTTATCTCCATCTCCGCAACT 59.234 45.455 0.00 0.00 0.00 3.16
4199 4574 3.958147 TGTTATCTCCATCTCCGCAACTA 59.042 43.478 0.00 0.00 0.00 2.24
4200 4575 4.404394 TGTTATCTCCATCTCCGCAACTAA 59.596 41.667 0.00 0.00 0.00 2.24
4201 4576 5.070446 TGTTATCTCCATCTCCGCAACTAAT 59.930 40.000 0.00 0.00 0.00 1.73
4202 4577 6.266786 TGTTATCTCCATCTCCGCAACTAATA 59.733 38.462 0.00 0.00 0.00 0.98
4203 4578 5.808366 ATCTCCATCTCCGCAACTAATAA 57.192 39.130 0.00 0.00 0.00 1.40
4204 4579 5.607939 TCTCCATCTCCGCAACTAATAAA 57.392 39.130 0.00 0.00 0.00 1.40
4205 4580 5.984725 TCTCCATCTCCGCAACTAATAAAA 58.015 37.500 0.00 0.00 0.00 1.52
4206 4581 6.049149 TCTCCATCTCCGCAACTAATAAAAG 58.951 40.000 0.00 0.00 0.00 2.27
4207 4582 5.984725 TCCATCTCCGCAACTAATAAAAGA 58.015 37.500 0.00 0.00 0.00 2.52
4208 4583 6.591935 TCCATCTCCGCAACTAATAAAAGAT 58.408 36.000 0.00 0.00 0.00 2.40
4209 4584 6.706270 TCCATCTCCGCAACTAATAAAAGATC 59.294 38.462 0.00 0.00 0.00 2.75
4210 4585 6.483307 CCATCTCCGCAACTAATAAAAGATCA 59.517 38.462 0.00 0.00 0.00 2.92
4211 4586 7.012327 CCATCTCCGCAACTAATAAAAGATCAA 59.988 37.037 0.00 0.00 0.00 2.57
4212 4587 7.915293 TCTCCGCAACTAATAAAAGATCAAA 57.085 32.000 0.00 0.00 0.00 2.69
4213 4588 7.748847 TCTCCGCAACTAATAAAAGATCAAAC 58.251 34.615 0.00 0.00 0.00 2.93
4214 4589 6.539324 TCCGCAACTAATAAAAGATCAAACG 58.461 36.000 0.00 0.00 0.00 3.60
4215 4590 6.148150 TCCGCAACTAATAAAAGATCAAACGT 59.852 34.615 0.00 0.00 0.00 3.99
4216 4591 6.248420 CCGCAACTAATAAAAGATCAAACGTG 59.752 38.462 0.00 0.00 0.00 4.49
4217 4592 7.012943 CGCAACTAATAAAAGATCAAACGTGA 58.987 34.615 0.00 0.00 38.41 4.35
4219 4594 9.341899 GCAACTAATAAAAGATCAAACGTGATT 57.658 29.630 0.00 0.00 44.83 2.57
4231 4606 8.846607 AGATCAAACGTGATTTATTTTAAACGC 58.153 29.630 0.00 0.00 44.83 4.84
4232 4607 7.909777 TCAAACGTGATTTATTTTAAACGCA 57.090 28.000 0.00 0.00 34.54 5.24
4233 4608 7.765958 TCAAACGTGATTTATTTTAAACGCAC 58.234 30.769 0.00 0.00 34.54 5.34
4234 4609 6.678540 AACGTGATTTATTTTAAACGCACC 57.321 33.333 0.00 0.00 34.54 5.01
4235 4610 5.155643 ACGTGATTTATTTTAAACGCACCC 58.844 37.500 0.00 0.00 34.54 4.61
4236 4611 4.559643 CGTGATTTATTTTAAACGCACCCC 59.440 41.667 0.00 0.00 0.00 4.95
4237 4612 5.471257 GTGATTTATTTTAAACGCACCCCA 58.529 37.500 0.00 0.00 0.00 4.96
4238 4613 5.346551 GTGATTTATTTTAAACGCACCCCAC 59.653 40.000 0.00 0.00 0.00 4.61
4239 4614 4.931661 TTTATTTTAAACGCACCCCACA 57.068 36.364 0.00 0.00 0.00 4.17
4240 4615 4.931661 TTATTTTAAACGCACCCCACAA 57.068 36.364 0.00 0.00 0.00 3.33
4241 4616 3.821421 ATTTTAAACGCACCCCACAAA 57.179 38.095 0.00 0.00 0.00 2.83
4242 4617 3.604875 TTTTAAACGCACCCCACAAAA 57.395 38.095 0.00 0.00 0.00 2.44
4243 4618 2.580966 TTAAACGCACCCCACAAAAC 57.419 45.000 0.00 0.00 0.00 2.43
4244 4619 1.471119 TAAACGCACCCCACAAAACA 58.529 45.000 0.00 0.00 0.00 2.83
4245 4620 0.827368 AAACGCACCCCACAAAACAT 59.173 45.000 0.00 0.00 0.00 2.71
4246 4621 1.693627 AACGCACCCCACAAAACATA 58.306 45.000 0.00 0.00 0.00 2.29
4247 4622 0.955905 ACGCACCCCACAAAACATAC 59.044 50.000 0.00 0.00 0.00 2.39
4248 4623 0.955178 CGCACCCCACAAAACATACA 59.045 50.000 0.00 0.00 0.00 2.29
4249 4624 1.335506 CGCACCCCACAAAACATACAC 60.336 52.381 0.00 0.00 0.00 2.90
4250 4625 1.335506 GCACCCCACAAAACATACACG 60.336 52.381 0.00 0.00 0.00 4.49
4251 4626 2.222886 CACCCCACAAAACATACACGA 58.777 47.619 0.00 0.00 0.00 4.35
4252 4627 2.619177 CACCCCACAAAACATACACGAA 59.381 45.455 0.00 0.00 0.00 3.85
4253 4628 2.619646 ACCCCACAAAACATACACGAAC 59.380 45.455 0.00 0.00 0.00 3.95
4254 4629 2.030628 CCCCACAAAACATACACGAACC 60.031 50.000 0.00 0.00 0.00 3.62
4255 4630 2.619177 CCCACAAAACATACACGAACCA 59.381 45.455 0.00 0.00 0.00 3.67
4256 4631 3.066900 CCCACAAAACATACACGAACCAA 59.933 43.478 0.00 0.00 0.00 3.67
4257 4632 4.261825 CCCACAAAACATACACGAACCAAT 60.262 41.667 0.00 0.00 0.00 3.16
4258 4633 4.915085 CCACAAAACATACACGAACCAATC 59.085 41.667 0.00 0.00 0.00 2.67
4259 4634 4.915085 CACAAAACATACACGAACCAATCC 59.085 41.667 0.00 0.00 0.00 3.01
4260 4635 4.022676 ACAAAACATACACGAACCAATCCC 60.023 41.667 0.00 0.00 0.00 3.85
4261 4636 3.426787 AACATACACGAACCAATCCCA 57.573 42.857 0.00 0.00 0.00 4.37
4262 4637 2.706890 ACATACACGAACCAATCCCAC 58.293 47.619 0.00 0.00 0.00 4.61
4263 4638 2.014128 CATACACGAACCAATCCCACC 58.986 52.381 0.00 0.00 0.00 4.61
4264 4639 1.057471 TACACGAACCAATCCCACCA 58.943 50.000 0.00 0.00 0.00 4.17
4265 4640 0.536460 ACACGAACCAATCCCACCAC 60.536 55.000 0.00 0.00 0.00 4.16
4266 4641 0.536233 CACGAACCAATCCCACCACA 60.536 55.000 0.00 0.00 0.00 4.17
4267 4642 0.404040 ACGAACCAATCCCACCACAT 59.596 50.000 0.00 0.00 0.00 3.21
4268 4643 1.094785 CGAACCAATCCCACCACATC 58.905 55.000 0.00 0.00 0.00 3.06
4269 4644 1.612991 CGAACCAATCCCACCACATCA 60.613 52.381 0.00 0.00 0.00 3.07
4270 4645 2.738743 GAACCAATCCCACCACATCAT 58.261 47.619 0.00 0.00 0.00 2.45
4271 4646 2.925966 ACCAATCCCACCACATCATT 57.074 45.000 0.00 0.00 0.00 2.57
4272 4647 4.277476 GAACCAATCCCACCACATCATTA 58.723 43.478 0.00 0.00 0.00 1.90
4273 4648 4.329638 ACCAATCCCACCACATCATTAA 57.670 40.909 0.00 0.00 0.00 1.40
4274 4649 4.280819 ACCAATCCCACCACATCATTAAG 58.719 43.478 0.00 0.00 0.00 1.85
4275 4650 3.068590 CCAATCCCACCACATCATTAAGC 59.931 47.826 0.00 0.00 0.00 3.09
4276 4651 2.435372 TCCCACCACATCATTAAGCC 57.565 50.000 0.00 0.00 0.00 4.35
4277 4652 1.064017 TCCCACCACATCATTAAGCCC 60.064 52.381 0.00 0.00 0.00 5.19
4278 4653 1.341877 CCCACCACATCATTAAGCCCA 60.342 52.381 0.00 0.00 0.00 5.36
4279 4654 1.750778 CCACCACATCATTAAGCCCAC 59.249 52.381 0.00 0.00 0.00 4.61
4280 4655 2.621407 CCACCACATCATTAAGCCCACT 60.621 50.000 0.00 0.00 0.00 4.00
4281 4656 3.371487 CCACCACATCATTAAGCCCACTA 60.371 47.826 0.00 0.00 0.00 2.74
4282 4657 4.269183 CACCACATCATTAAGCCCACTAA 58.731 43.478 0.00 0.00 0.00 2.24
4283 4658 4.889409 CACCACATCATTAAGCCCACTAAT 59.111 41.667 0.00 0.00 0.00 1.73
4284 4659 5.009010 CACCACATCATTAAGCCCACTAATC 59.991 44.000 0.00 0.00 0.00 1.75
4285 4660 5.103940 ACCACATCATTAAGCCCACTAATCT 60.104 40.000 0.00 0.00 0.00 2.40
4286 4661 5.471456 CCACATCATTAAGCCCACTAATCTC 59.529 44.000 0.00 0.00 0.00 2.75
4287 4662 6.057533 CACATCATTAAGCCCACTAATCTCA 58.942 40.000 0.00 0.00 0.00 3.27
4288 4663 6.543465 CACATCATTAAGCCCACTAATCTCAA 59.457 38.462 0.00 0.00 0.00 3.02
4289 4664 7.230108 CACATCATTAAGCCCACTAATCTCAAT 59.770 37.037 0.00 0.00 0.00 2.57
4290 4665 7.446625 ACATCATTAAGCCCACTAATCTCAATC 59.553 37.037 0.00 0.00 0.00 2.67
4291 4666 7.141758 TCATTAAGCCCACTAATCTCAATCT 57.858 36.000 0.00 0.00 0.00 2.40
4292 4667 8.262601 TCATTAAGCCCACTAATCTCAATCTA 57.737 34.615 0.00 0.00 0.00 1.98
4293 4668 8.713971 TCATTAAGCCCACTAATCTCAATCTAA 58.286 33.333 0.00 0.00 0.00 2.10
4294 4669 8.778358 CATTAAGCCCACTAATCTCAATCTAAC 58.222 37.037 0.00 0.00 0.00 2.34
4295 4670 6.567602 AAGCCCACTAATCTCAATCTAACT 57.432 37.500 0.00 0.00 0.00 2.24
4296 4671 5.923204 AGCCCACTAATCTCAATCTAACTG 58.077 41.667 0.00 0.00 0.00 3.16
4297 4672 5.426833 AGCCCACTAATCTCAATCTAACTGT 59.573 40.000 0.00 0.00 0.00 3.55
4298 4673 6.069963 AGCCCACTAATCTCAATCTAACTGTT 60.070 38.462 0.00 0.00 0.00 3.16
4299 4674 6.258947 GCCCACTAATCTCAATCTAACTGTTC 59.741 42.308 0.00 0.00 0.00 3.18
4300 4675 7.560368 CCCACTAATCTCAATCTAACTGTTCT 58.440 38.462 0.00 0.00 0.00 3.01
4301 4676 7.708752 CCCACTAATCTCAATCTAACTGTTCTC 59.291 40.741 0.00 0.00 0.00 2.87
4302 4677 8.253810 CCACTAATCTCAATCTAACTGTTCTCA 58.746 37.037 0.00 0.00 0.00 3.27
4303 4678 9.645059 CACTAATCTCAATCTAACTGTTCTCAA 57.355 33.333 0.00 0.00 0.00 3.02
4307 4682 9.956640 AATCTCAATCTAACTGTTCTCAATCTT 57.043 29.630 0.00 0.00 0.00 2.40
4317 4692 8.908786 AACTGTTCTCAATCTTAACTTGATCA 57.091 30.769 0.00 0.00 32.50 2.92
4318 4693 8.545229 ACTGTTCTCAATCTTAACTTGATCAG 57.455 34.615 0.00 13.72 35.02 2.90
4319 4694 8.153550 ACTGTTCTCAATCTTAACTTGATCAGT 58.846 33.333 0.00 14.41 36.00 3.41
4321 4696 9.342308 TGTTCTCAATCTTAACTTGATCAGTTT 57.658 29.630 13.40 6.12 43.89 2.66
4324 4699 9.003658 TCTCAATCTTAACTTGATCAGTTTTCC 57.996 33.333 13.40 0.00 43.89 3.13
4325 4700 8.690203 TCAATCTTAACTTGATCAGTTTTCCA 57.310 30.769 13.40 0.00 43.89 3.53
4326 4701 9.300681 TCAATCTTAACTTGATCAGTTTTCCAT 57.699 29.630 13.40 2.77 43.89 3.41
4327 4702 9.350357 CAATCTTAACTTGATCAGTTTTCCATG 57.650 33.333 13.40 0.00 43.89 3.66
4328 4703 8.641498 ATCTTAACTTGATCAGTTTTCCATGT 57.359 30.769 13.40 0.00 43.89 3.21
4329 4704 7.874940 TCTTAACTTGATCAGTTTTCCATGTG 58.125 34.615 13.40 0.00 43.89 3.21
4330 4705 4.510038 ACTTGATCAGTTTTCCATGTGC 57.490 40.909 0.00 0.00 27.32 4.57
4331 4706 3.890756 ACTTGATCAGTTTTCCATGTGCA 59.109 39.130 0.00 0.00 27.32 4.57
4332 4707 3.921119 TGATCAGTTTTCCATGTGCAC 57.079 42.857 10.75 10.75 0.00 4.57
4333 4708 3.489355 TGATCAGTTTTCCATGTGCACT 58.511 40.909 19.41 0.15 0.00 4.40
4334 4709 3.890756 TGATCAGTTTTCCATGTGCACTT 59.109 39.130 19.41 9.21 0.00 3.16
4335 4710 5.069318 TGATCAGTTTTCCATGTGCACTTA 58.931 37.500 19.41 0.00 0.00 2.24
4336 4711 5.181811 TGATCAGTTTTCCATGTGCACTTAG 59.818 40.000 19.41 5.00 0.00 2.18
4337 4712 3.253188 TCAGTTTTCCATGTGCACTTAGC 59.747 43.478 19.41 0.00 45.96 3.09
4352 4727 6.859715 GCACTTAGCAATTTGTATTGACTG 57.140 37.500 2.25 0.00 43.12 3.51
4353 4728 6.611381 GCACTTAGCAATTTGTATTGACTGA 58.389 36.000 2.25 0.00 43.12 3.41
4354 4729 6.524586 GCACTTAGCAATTTGTATTGACTGAC 59.475 38.462 2.25 0.00 43.12 3.51
4355 4730 7.023575 CACTTAGCAATTTGTATTGACTGACC 58.976 38.462 2.25 0.00 43.12 4.02
4356 4731 6.714810 ACTTAGCAATTTGTATTGACTGACCA 59.285 34.615 2.25 0.00 43.12 4.02
4357 4732 7.394359 ACTTAGCAATTTGTATTGACTGACCAT 59.606 33.333 2.25 0.00 43.12 3.55
4358 4733 8.800370 TTAGCAATTTGTATTGACTGACCATA 57.200 30.769 2.25 0.00 43.12 2.74
4359 4734 7.088589 AGCAATTTGTATTGACTGACCATAC 57.911 36.000 2.25 0.00 43.12 2.39
4360 4735 6.886459 AGCAATTTGTATTGACTGACCATACT 59.114 34.615 2.25 0.00 43.12 2.12
4361 4736 7.066284 AGCAATTTGTATTGACTGACCATACTC 59.934 37.037 2.25 0.00 43.12 2.59
4362 4737 7.679638 GCAATTTGTATTGACTGACCATACTCC 60.680 40.741 2.25 0.00 43.12 3.85
4363 4738 6.367374 TTTGTATTGACTGACCATACTCCA 57.633 37.500 3.83 0.00 0.00 3.86
4364 4739 5.339008 TGTATTGACTGACCATACTCCAC 57.661 43.478 3.83 0.00 0.00 4.02
4365 4740 3.914426 ATTGACTGACCATACTCCACC 57.086 47.619 0.00 0.00 0.00 4.61
4366 4741 1.568504 TGACTGACCATACTCCACCC 58.431 55.000 0.00 0.00 0.00 4.61
4367 4742 1.203250 TGACTGACCATACTCCACCCA 60.203 52.381 0.00 0.00 0.00 4.51
4368 4743 1.906574 GACTGACCATACTCCACCCAA 59.093 52.381 0.00 0.00 0.00 4.12
4369 4744 1.909302 ACTGACCATACTCCACCCAAG 59.091 52.381 0.00 0.00 0.00 3.61
4370 4745 1.210478 CTGACCATACTCCACCCAAGG 59.790 57.143 0.00 0.00 0.00 3.61
4371 4746 1.203376 TGACCATACTCCACCCAAGGA 60.203 52.381 0.00 0.00 36.00 3.36
4372 4747 1.209747 GACCATACTCCACCCAAGGAC 59.790 57.143 0.00 0.00 33.19 3.85
4373 4748 1.203440 ACCATACTCCACCCAAGGACT 60.203 52.381 0.00 0.00 33.19 3.85
4374 4749 2.045326 ACCATACTCCACCCAAGGACTA 59.955 50.000 0.00 0.00 33.19 2.59
4375 4750 3.112263 CCATACTCCACCCAAGGACTAA 58.888 50.000 0.00 0.00 33.19 2.24
4376 4751 3.716872 CCATACTCCACCCAAGGACTAAT 59.283 47.826 0.00 0.00 33.19 1.73
4377 4752 4.202367 CCATACTCCACCCAAGGACTAATC 60.202 50.000 0.00 0.00 33.19 1.75
4378 4753 2.915869 ACTCCACCCAAGGACTAATCA 58.084 47.619 0.00 0.00 33.19 2.57
4379 4754 2.572104 ACTCCACCCAAGGACTAATCAC 59.428 50.000 0.00 0.00 33.19 3.06
4380 4755 1.913419 TCCACCCAAGGACTAATCACC 59.087 52.381 0.00 0.00 31.23 4.02
4381 4756 1.064685 CCACCCAAGGACTAATCACCC 60.065 57.143 0.00 0.00 0.00 4.61
4382 4757 1.064685 CACCCAAGGACTAATCACCCC 60.065 57.143 0.00 0.00 0.00 4.95
4383 4758 0.180406 CCCAAGGACTAATCACCCCG 59.820 60.000 0.00 0.00 0.00 5.73
4384 4759 0.909623 CCAAGGACTAATCACCCCGT 59.090 55.000 0.00 0.00 0.00 5.28
4385 4760 1.406887 CCAAGGACTAATCACCCCGTG 60.407 57.143 0.00 0.00 34.45 4.94
4386 4761 1.553248 CAAGGACTAATCACCCCGTGA 59.447 52.381 0.00 0.00 46.90 4.35
4387 4762 1.946984 AGGACTAATCACCCCGTGAA 58.053 50.000 0.00 0.00 45.96 3.18
4388 4763 2.262637 AGGACTAATCACCCCGTGAAA 58.737 47.619 0.00 0.00 45.96 2.69
4389 4764 2.640826 AGGACTAATCACCCCGTGAAAA 59.359 45.455 0.00 0.00 45.96 2.29
4390 4765 3.073356 AGGACTAATCACCCCGTGAAAAA 59.927 43.478 0.00 0.00 45.96 1.94
4411 4786 6.819397 AAAAGGAAACTACTAATCACAGCC 57.181 37.500 0.00 0.00 42.68 4.85
4412 4787 4.124851 AGGAAACTACTAATCACAGCCG 57.875 45.455 0.00 0.00 40.61 5.52
4413 4788 3.767673 AGGAAACTACTAATCACAGCCGA 59.232 43.478 0.00 0.00 40.61 5.54
4414 4789 4.406003 AGGAAACTACTAATCACAGCCGAT 59.594 41.667 0.00 0.00 40.61 4.18
4415 4790 4.745620 GGAAACTACTAATCACAGCCGATC 59.254 45.833 0.00 0.00 0.00 3.69
4416 4791 4.323553 AACTACTAATCACAGCCGATCC 57.676 45.455 0.00 0.00 0.00 3.36
4417 4792 2.628657 ACTACTAATCACAGCCGATCCC 59.371 50.000 0.00 0.00 0.00 3.85
4418 4793 1.794714 ACTAATCACAGCCGATCCCT 58.205 50.000 0.00 0.00 0.00 4.20
4419 4794 2.958818 ACTAATCACAGCCGATCCCTA 58.041 47.619 0.00 0.00 0.00 3.53
4420 4795 3.511477 ACTAATCACAGCCGATCCCTAT 58.489 45.455 0.00 0.00 0.00 2.57
4421 4796 4.673968 ACTAATCACAGCCGATCCCTATA 58.326 43.478 0.00 0.00 0.00 1.31
4422 4797 5.273208 ACTAATCACAGCCGATCCCTATAT 58.727 41.667 0.00 0.00 0.00 0.86
4423 4798 4.478206 AATCACAGCCGATCCCTATATG 57.522 45.455 0.00 0.00 0.00 1.78
4424 4799 2.179427 TCACAGCCGATCCCTATATGG 58.821 52.381 0.00 0.00 0.00 2.74
4425 4800 1.902508 CACAGCCGATCCCTATATGGT 59.097 52.381 0.00 0.00 0.00 3.55
4426 4801 2.093973 CACAGCCGATCCCTATATGGTC 60.094 54.545 0.00 0.00 0.00 4.02
4427 4802 2.179427 CAGCCGATCCCTATATGGTCA 58.821 52.381 0.00 0.00 0.00 4.02
4428 4803 2.567169 CAGCCGATCCCTATATGGTCAA 59.433 50.000 0.00 0.00 0.00 3.18
4429 4804 2.567615 AGCCGATCCCTATATGGTCAAC 59.432 50.000 0.00 0.00 0.00 3.18
4430 4805 2.354805 GCCGATCCCTATATGGTCAACC 60.355 54.545 0.00 0.00 0.00 3.77
4442 4817 3.451141 TGGTCAACCAAAAATGAGCAC 57.549 42.857 0.00 0.00 45.91 4.40
4443 4818 2.102252 TGGTCAACCAAAAATGAGCACC 59.898 45.455 0.00 0.00 45.91 5.01
4444 4819 2.547855 GGTCAACCAAAAATGAGCACCC 60.548 50.000 0.00 0.00 42.19 4.61
4445 4820 1.691434 TCAACCAAAAATGAGCACCCC 59.309 47.619 0.00 0.00 0.00 4.95
4446 4821 1.415659 CAACCAAAAATGAGCACCCCA 59.584 47.619 0.00 0.00 0.00 4.96
4447 4822 1.047801 ACCAAAAATGAGCACCCCAC 58.952 50.000 0.00 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 1.960689 GCTCTAGGGTGGTTGCAAAAA 59.039 47.619 0.00 0.00 0.00 1.94
16 17 1.144913 AGCTCTAGGGTGGTTGCAAAA 59.855 47.619 0.00 0.00 0.00 2.44
17 18 0.771127 AGCTCTAGGGTGGTTGCAAA 59.229 50.000 0.00 0.00 0.00 3.68
18 19 1.651737 TAGCTCTAGGGTGGTTGCAA 58.348 50.000 0.00 0.00 0.00 4.08
19 20 1.278127 GTTAGCTCTAGGGTGGTTGCA 59.722 52.381 0.00 0.00 0.00 4.08
20 21 1.555533 AGTTAGCTCTAGGGTGGTTGC 59.444 52.381 0.00 0.00 0.00 4.17
21 22 4.024670 ACTAGTTAGCTCTAGGGTGGTTG 58.975 47.826 12.67 0.00 40.97 3.77
22 23 4.024670 CACTAGTTAGCTCTAGGGTGGTT 58.975 47.826 12.67 0.00 40.97 3.67
23 24 3.627747 CCACTAGTTAGCTCTAGGGTGGT 60.628 52.174 12.67 0.00 39.14 4.16
24 25 2.959707 CCACTAGTTAGCTCTAGGGTGG 59.040 54.545 12.67 12.18 39.14 4.61
25 26 2.959707 CCCACTAGTTAGCTCTAGGGTG 59.040 54.545 12.67 7.86 39.14 4.61
26 27 2.690329 GCCCACTAGTTAGCTCTAGGGT 60.690 54.545 12.67 0.00 39.14 4.34
27 28 1.964933 GCCCACTAGTTAGCTCTAGGG 59.035 57.143 12.67 9.04 40.97 3.53
28 29 2.952116 AGCCCACTAGTTAGCTCTAGG 58.048 52.381 10.06 0.00 40.97 3.02
29 30 3.822167 GGTAGCCCACTAGTTAGCTCTAG 59.178 52.174 17.54 7.70 41.99 2.43
30 31 3.203710 TGGTAGCCCACTAGTTAGCTCTA 59.796 47.826 17.54 7.25 35.17 2.43
31 32 2.024273 TGGTAGCCCACTAGTTAGCTCT 60.024 50.000 17.54 3.12 35.17 4.09
32 33 2.362717 CTGGTAGCCCACTAGTTAGCTC 59.637 54.545 17.54 10.63 35.17 4.09
33 34 2.389715 CTGGTAGCCCACTAGTTAGCT 58.610 52.381 17.98 17.98 35.17 3.32
34 35 1.202545 GCTGGTAGCCCACTAGTTAGC 60.203 57.143 5.86 5.86 38.01 3.09
35 36 2.892784 GCTGGTAGCCCACTAGTTAG 57.107 55.000 0.00 0.00 38.01 2.34
46 47 0.251608 TTTGGAAAGGGGCTGGTAGC 60.252 55.000 0.00 0.00 41.46 3.58
47 48 1.075536 ACTTTGGAAAGGGGCTGGTAG 59.924 52.381 4.23 0.00 40.31 3.18
48 49 1.154430 ACTTTGGAAAGGGGCTGGTA 58.846 50.000 4.23 0.00 40.31 3.25
49 50 0.264657 AACTTTGGAAAGGGGCTGGT 59.735 50.000 4.23 0.00 40.31 4.00
50 51 1.893137 GTAACTTTGGAAAGGGGCTGG 59.107 52.381 4.23 0.00 40.31 4.85
51 52 1.893137 GGTAACTTTGGAAAGGGGCTG 59.107 52.381 4.23 0.00 40.31 4.85
52 53 1.501604 TGGTAACTTTGGAAAGGGGCT 59.498 47.619 4.23 0.00 40.31 5.19
53 54 2.003937 TGGTAACTTTGGAAAGGGGC 57.996 50.000 4.23 0.00 40.31 5.80
54 55 3.773560 TGATGGTAACTTTGGAAAGGGG 58.226 45.455 4.23 0.00 40.31 4.79
55 56 7.660030 ATATTGATGGTAACTTTGGAAAGGG 57.340 36.000 4.23 0.00 40.31 3.95
83 84 8.865090 GGAATCCTCAAAATAGATCTACTCAGA 58.135 37.037 4.10 0.99 34.56 3.27
84 85 8.869109 AGGAATCCTCAAAATAGATCTACTCAG 58.131 37.037 4.10 0.00 0.00 3.35
85 86 8.789767 AGGAATCCTCAAAATAGATCTACTCA 57.210 34.615 4.10 0.00 0.00 3.41
93 94 9.020731 GGTTACAAAAGGAATCCTCAAAATAGA 57.979 33.333 0.56 0.00 30.89 1.98
94 95 8.251026 GGGTTACAAAAGGAATCCTCAAAATAG 58.749 37.037 0.56 0.00 30.89 1.73
95 96 7.730784 TGGGTTACAAAAGGAATCCTCAAAATA 59.269 33.333 0.56 0.00 30.89 1.40
96 97 6.556874 TGGGTTACAAAAGGAATCCTCAAAAT 59.443 34.615 0.56 0.00 30.89 1.82
97 98 5.900123 TGGGTTACAAAAGGAATCCTCAAAA 59.100 36.000 0.56 0.00 30.89 2.44
98 99 5.459505 TGGGTTACAAAAGGAATCCTCAAA 58.540 37.500 0.56 0.00 30.89 2.69
99 100 5.068215 TGGGTTACAAAAGGAATCCTCAA 57.932 39.130 0.56 0.00 30.89 3.02
100 101 4.733077 TGGGTTACAAAAGGAATCCTCA 57.267 40.909 0.56 0.00 30.89 3.86
101 102 5.593095 GGTATGGGTTACAAAAGGAATCCTC 59.407 44.000 0.56 0.00 29.91 3.71
102 103 5.015817 TGGTATGGGTTACAAAAGGAATCCT 59.984 40.000 0.00 0.00 30.94 3.24
103 104 5.265989 TGGTATGGGTTACAAAAGGAATCC 58.734 41.667 0.00 0.00 31.99 3.01
104 105 6.844097 TTGGTATGGGTTACAAAAGGAATC 57.156 37.500 0.00 0.00 31.99 2.52
105 106 6.014070 GGTTTGGTATGGGTTACAAAAGGAAT 60.014 38.462 0.00 0.00 34.95 3.01
106 107 5.304871 GGTTTGGTATGGGTTACAAAAGGAA 59.695 40.000 0.00 0.00 34.95 3.36
107 108 4.833938 GGTTTGGTATGGGTTACAAAAGGA 59.166 41.667 0.00 0.00 34.95 3.36
108 109 4.589374 TGGTTTGGTATGGGTTACAAAAGG 59.411 41.667 0.00 0.00 34.95 3.11
109 110 5.778862 CTGGTTTGGTATGGGTTACAAAAG 58.221 41.667 0.00 0.00 34.95 2.27
110 111 4.039366 GCTGGTTTGGTATGGGTTACAAAA 59.961 41.667 0.00 0.00 32.37 2.44
111 112 3.574826 GCTGGTTTGGTATGGGTTACAAA 59.425 43.478 0.00 0.00 31.99 2.83
112 113 3.158676 GCTGGTTTGGTATGGGTTACAA 58.841 45.455 0.00 0.00 31.99 2.41
113 114 2.797786 GCTGGTTTGGTATGGGTTACA 58.202 47.619 0.00 0.00 31.99 2.41
114 115 1.741145 CGCTGGTTTGGTATGGGTTAC 59.259 52.381 0.00 0.00 0.00 2.50
115 116 1.351683 ACGCTGGTTTGGTATGGGTTA 59.648 47.619 0.00 0.00 0.00 2.85
116 117 0.111639 ACGCTGGTTTGGTATGGGTT 59.888 50.000 0.00 0.00 0.00 4.11
117 118 0.111639 AACGCTGGTTTGGTATGGGT 59.888 50.000 0.00 0.00 30.42 4.51
118 119 1.253100 AAACGCTGGTTTGGTATGGG 58.747 50.000 0.00 0.00 44.43 4.00
119 120 2.814919 TGTAAACGCTGGTTTGGTATGG 59.185 45.455 2.67 0.00 45.60 2.74
120 121 4.491234 TTGTAAACGCTGGTTTGGTATG 57.509 40.909 2.67 0.00 45.60 2.39
121 122 4.762765 TGATTGTAAACGCTGGTTTGGTAT 59.237 37.500 2.67 0.00 45.60 2.73
122 123 4.135306 TGATTGTAAACGCTGGTTTGGTA 58.865 39.130 2.67 0.00 45.60 3.25
123 124 2.952978 TGATTGTAAACGCTGGTTTGGT 59.047 40.909 2.67 0.00 45.60 3.67
124 125 3.004315 ACTGATTGTAAACGCTGGTTTGG 59.996 43.478 2.67 0.00 45.60 3.28
125 126 4.223320 ACTGATTGTAAACGCTGGTTTG 57.777 40.909 2.67 0.00 45.60 2.93
127 128 4.911514 AAACTGATTGTAAACGCTGGTT 57.088 36.364 0.00 0.00 38.22 3.67
128 129 6.569179 AATAAACTGATTGTAAACGCTGGT 57.431 33.333 0.00 0.00 0.00 4.00
129 130 6.307800 CCAAATAAACTGATTGTAAACGCTGG 59.692 38.462 0.00 0.00 0.00 4.85
130 131 7.081349 TCCAAATAAACTGATTGTAAACGCTG 58.919 34.615 0.00 0.00 0.00 5.18
131 132 7.209471 TCCAAATAAACTGATTGTAAACGCT 57.791 32.000 0.00 0.00 0.00 5.07
132 133 7.009174 CCATCCAAATAAACTGATTGTAAACGC 59.991 37.037 0.00 0.00 0.00 4.84
133 134 8.240682 TCCATCCAAATAAACTGATTGTAAACG 58.759 33.333 0.00 0.00 0.00 3.60
134 135 9.921637 TTCCATCCAAATAAACTGATTGTAAAC 57.078 29.630 0.00 0.00 0.00 2.01
135 136 9.921637 GTTCCATCCAAATAAACTGATTGTAAA 57.078 29.630 0.00 0.00 0.00 2.01
136 137 8.527810 GGTTCCATCCAAATAAACTGATTGTAA 58.472 33.333 0.00 0.00 0.00 2.41
137 138 7.671819 TGGTTCCATCCAAATAAACTGATTGTA 59.328 33.333 0.00 0.00 34.24 2.41
138 139 6.496565 TGGTTCCATCCAAATAAACTGATTGT 59.503 34.615 0.00 0.00 34.24 2.71
139 140 6.934056 TGGTTCCATCCAAATAAACTGATTG 58.066 36.000 0.00 0.00 34.24 2.67
140 141 7.552050 TTGGTTCCATCCAAATAAACTGATT 57.448 32.000 0.00 0.00 43.40 2.57
166 167 0.879090 ACGTTTCTTTCCGGCCATTC 59.121 50.000 2.24 0.00 0.00 2.67
191 192 1.400494 TCGATTCGATTCAGAGCGTGA 59.600 47.619 4.29 0.00 35.84 4.35
209 210 1.303236 TTGCAGTGGGACCCAATCG 60.303 57.895 16.98 10.29 34.18 3.34
211 212 1.228862 GGTTGCAGTGGGACCCAAT 60.229 57.895 16.98 12.43 34.18 3.16
212 213 2.197324 GGTTGCAGTGGGACCCAA 59.803 61.111 16.98 0.00 34.18 4.12
224 225 3.517602 TGAGATGTGTATGTACGGTTGC 58.482 45.455 0.00 0.00 0.00 4.17
229 230 3.975035 CGACCATGAGATGTGTATGTACG 59.025 47.826 0.00 0.00 0.00 3.67
235 236 1.134818 GCACCGACCATGAGATGTGTA 60.135 52.381 0.00 0.00 0.00 2.90
238 239 1.153568 CGCACCGACCATGAGATGT 60.154 57.895 0.00 0.00 0.00 3.06
239 240 1.884464 CCGCACCGACCATGAGATG 60.884 63.158 0.00 0.00 0.00 2.90
240 241 1.613317 TTCCGCACCGACCATGAGAT 61.613 55.000 0.00 0.00 0.00 2.75
241 242 2.279810 TTCCGCACCGACCATGAGA 61.280 57.895 0.00 0.00 0.00 3.27
242 243 2.100631 GTTCCGCACCGACCATGAG 61.101 63.158 0.00 0.00 0.00 2.90
243 244 2.047655 GTTCCGCACCGACCATGA 60.048 61.111 0.00 0.00 0.00 3.07
244 245 3.124921 GGTTCCGCACCGACCATG 61.125 66.667 0.00 0.00 35.12 3.66
262 263 9.098355 AGCTTTAGAAATTTCTTTTGACCAAAC 57.902 29.630 25.02 11.74 38.70 2.93
264 265 9.097257 CAAGCTTTAGAAATTTCTTTTGACCAA 57.903 29.630 25.02 9.33 38.70 3.67
307 309 8.558973 TTGCCCTTGTTTATTTTGGATTATTG 57.441 30.769 0.00 0.00 0.00 1.90
341 347 5.774498 TGCCCTTGTTTTGTTTTGTTTTT 57.226 30.435 0.00 0.00 0.00 1.94
342 348 5.474876 TGATGCCCTTGTTTTGTTTTGTTTT 59.525 32.000 0.00 0.00 0.00 2.43
343 349 5.006386 TGATGCCCTTGTTTTGTTTTGTTT 58.994 33.333 0.00 0.00 0.00 2.83
344 350 4.394610 GTGATGCCCTTGTTTTGTTTTGTT 59.605 37.500 0.00 0.00 0.00 2.83
345 351 3.938334 GTGATGCCCTTGTTTTGTTTTGT 59.062 39.130 0.00 0.00 0.00 2.83
346 352 3.937706 TGTGATGCCCTTGTTTTGTTTTG 59.062 39.130 0.00 0.00 0.00 2.44
347 353 3.938334 GTGTGATGCCCTTGTTTTGTTTT 59.062 39.130 0.00 0.00 0.00 2.43
348 354 3.530535 GTGTGATGCCCTTGTTTTGTTT 58.469 40.909 0.00 0.00 0.00 2.83
349 355 2.158971 GGTGTGATGCCCTTGTTTTGTT 60.159 45.455 0.00 0.00 0.00 2.83
350 356 1.412343 GGTGTGATGCCCTTGTTTTGT 59.588 47.619 0.00 0.00 0.00 2.83
351 357 1.602668 CGGTGTGATGCCCTTGTTTTG 60.603 52.381 0.00 0.00 0.00 2.44
352 358 0.673437 CGGTGTGATGCCCTTGTTTT 59.327 50.000 0.00 0.00 0.00 2.43
353 359 0.467290 ACGGTGTGATGCCCTTGTTT 60.467 50.000 0.00 0.00 0.00 2.83
354 360 0.398696 TACGGTGTGATGCCCTTGTT 59.601 50.000 0.00 0.00 0.00 2.83
355 361 0.321298 GTACGGTGTGATGCCCTTGT 60.321 55.000 0.00 0.00 0.00 3.16
356 362 1.024579 GGTACGGTGTGATGCCCTTG 61.025 60.000 0.00 0.00 0.00 3.61
357 363 1.298667 GGTACGGTGTGATGCCCTT 59.701 57.895 0.00 0.00 0.00 3.95
358 364 1.899437 CTGGTACGGTGTGATGCCCT 61.899 60.000 0.00 0.00 0.00 5.19
359 365 1.449601 CTGGTACGGTGTGATGCCC 60.450 63.158 0.00 0.00 0.00 5.36
360 366 4.201951 CTGGTACGGTGTGATGCC 57.798 61.111 0.00 0.00 0.00 4.40
384 390 5.064707 TCCGCGAATCATAAAAAGGAAGAAG 59.935 40.000 8.23 0.00 0.00 2.85
385 391 4.938832 TCCGCGAATCATAAAAAGGAAGAA 59.061 37.500 8.23 0.00 0.00 2.52
387 393 4.875544 TCCGCGAATCATAAAAAGGAAG 57.124 40.909 8.23 0.00 0.00 3.46
390 398 5.636837 TCTTTTCCGCGAATCATAAAAAGG 58.363 37.500 8.23 0.00 35.48 3.11
395 403 5.092781 GCTTTTCTTTTCCGCGAATCATAA 58.907 37.500 8.23 0.00 0.00 1.90
396 404 4.658071 GCTTTTCTTTTCCGCGAATCATA 58.342 39.130 8.23 0.00 0.00 2.15
408 421 1.299850 GGTGCGGCGCTTTTCTTTT 60.300 52.632 33.26 0.00 0.00 2.27
491 505 5.556915 TCCATTCTAACCGAATTGTTGACT 58.443 37.500 0.00 0.00 40.33 3.41
501 515 3.071479 GTGCACTTTCCATTCTAACCGA 58.929 45.455 10.32 0.00 0.00 4.69
534 553 4.047059 CTGTTTGGGCTGGCGCTG 62.047 66.667 7.64 1.33 36.09 5.18
535 554 3.190738 TACTGTTTGGGCTGGCGCT 62.191 57.895 7.64 0.00 36.09 5.92
536 555 2.671619 TACTGTTTGGGCTGGCGC 60.672 61.111 0.00 0.00 0.00 6.53
537 556 1.298859 GAGTACTGTTTGGGCTGGCG 61.299 60.000 0.00 0.00 0.00 5.69
656 698 3.428282 GTTGGCGTTGGTAGGCGG 61.428 66.667 0.00 0.00 36.03 6.13
657 699 2.666862 TGTTGGCGTTGGTAGGCG 60.667 61.111 0.00 0.00 36.03 5.52
658 700 2.622962 GGTGTTGGCGTTGGTAGGC 61.623 63.158 0.00 0.00 34.46 3.93
659 701 2.322081 CGGTGTTGGCGTTGGTAGG 61.322 63.158 0.00 0.00 0.00 3.18
660 702 1.301087 TCGGTGTTGGCGTTGGTAG 60.301 57.895 0.00 0.00 0.00 3.18
757 799 2.041405 GGAGTCCTGGGCTAGCCT 60.041 66.667 32.18 12.48 36.10 4.58
759 801 2.439104 CCTGGAGTCCTGGGCTAGC 61.439 68.421 24.19 6.04 38.71 3.42
760 802 2.439104 GCCTGGAGTCCTGGGCTAG 61.439 68.421 30.35 10.59 42.02 3.42
761 803 2.365635 GCCTGGAGTCCTGGGCTA 60.366 66.667 30.35 0.88 42.02 3.93
762 804 4.345286 AGCCTGGAGTCCTGGGCT 62.345 66.667 30.47 30.47 43.84 5.19
763 805 4.106925 CAGCCTGGAGTCCTGGGC 62.107 72.222 30.35 29.04 42.02 5.36
832 887 2.112297 GTGGACTGGTGGGCGAAA 59.888 61.111 0.00 0.00 0.00 3.46
878 933 2.602267 TCGTCGCTTGGAGGGGAA 60.602 61.111 0.00 0.00 0.00 3.97
879 934 3.379445 GTCGTCGCTTGGAGGGGA 61.379 66.667 0.00 0.00 0.00 4.81
880 935 3.358076 GAGTCGTCGCTTGGAGGGG 62.358 68.421 0.00 0.00 0.00 4.79
881 936 2.182030 GAGTCGTCGCTTGGAGGG 59.818 66.667 0.00 0.00 0.00 4.30
1117 1185 2.847234 TGACGAGCCCACCCAGTT 60.847 61.111 0.00 0.00 0.00 3.16
1173 1242 4.649705 TCCAACCGAGGGGGCTGA 62.650 66.667 0.00 0.00 40.62 4.26
1174 1243 4.101448 CTCCAACCGAGGGGGCTG 62.101 72.222 0.00 0.00 40.62 4.85
1175 1244 4.658786 ACTCCAACCGAGGGGGCT 62.659 66.667 0.00 0.00 43.57 5.19
1177 1246 2.669240 GAACTCCAACCGAGGGGG 59.331 66.667 0.00 0.00 43.57 5.40
1178 1247 2.264794 CGAACTCCAACCGAGGGG 59.735 66.667 0.00 0.00 43.57 4.79
1180 1249 1.446272 GAGCGAACTCCAACCGAGG 60.446 63.158 0.00 0.00 43.57 4.63
1182 1251 2.257371 CGAGCGAACTCCAACCGA 59.743 61.111 0.00 0.00 40.03 4.69
1184 1253 2.048127 AGCGAGCGAACTCCAACC 60.048 61.111 0.00 0.00 40.03 3.77
1185 1254 0.170561 TAGAGCGAGCGAACTCCAAC 59.829 55.000 0.00 0.00 40.03 3.77
1209 1280 2.874751 GTGGCGAAATTCCCACCG 59.125 61.111 17.35 0.00 44.48 4.94
1230 1301 2.333225 CAGACTAGCGGCCTAGCG 59.667 66.667 0.00 0.00 44.00 4.26
1236 1307 1.677637 AACCTAGCCAGACTAGCGGC 61.678 60.000 9.82 9.82 46.17 6.53
1237 1308 0.103208 CAACCTAGCCAGACTAGCGG 59.897 60.000 0.00 0.00 46.17 5.52
1238 1309 0.818296 ACAACCTAGCCAGACTAGCG 59.182 55.000 0.00 0.00 46.17 4.26
1239 1310 3.025262 AGTACAACCTAGCCAGACTAGC 58.975 50.000 0.00 0.00 46.17 3.42
1240 1311 5.528320 GTCTAGTACAACCTAGCCAGACTAG 59.472 48.000 0.00 0.00 46.95 2.57
1241 1312 5.435291 GTCTAGTACAACCTAGCCAGACTA 58.565 45.833 0.00 0.00 35.43 2.59
1242 1313 4.271661 GTCTAGTACAACCTAGCCAGACT 58.728 47.826 0.00 0.00 35.43 3.24
1258 1329 1.982938 GGTGGCACCCTCGTCTAGT 60.983 63.158 26.51 0.00 30.04 2.57
1262 1333 2.577593 GTAGGTGGCACCCTCGTC 59.422 66.667 32.30 14.55 39.75 4.20
1263 1334 3.379445 CGTAGGTGGCACCCTCGT 61.379 66.667 32.30 16.92 39.75 4.18
1326 1397 0.389948 CCGAACCAAGACTCTTCCCG 60.390 60.000 0.00 0.00 0.00 5.14
1327 1398 0.673956 GCCGAACCAAGACTCTTCCC 60.674 60.000 0.00 0.00 0.00 3.97
1410 1483 2.180017 CACCCAATTGCGAGCTGC 59.820 61.111 0.00 0.00 46.70 5.25
1419 1492 3.209410 GAGATGAGATTCGCACCCAATT 58.791 45.455 0.00 0.00 0.00 2.32
1440 1513 1.228033 ACGTTTTGGACCTTCCGGG 60.228 57.895 0.00 0.00 40.17 5.73
1470 1543 0.606401 ATGCGTCCTCCAACACCAAG 60.606 55.000 0.00 0.00 0.00 3.61
1517 1592 4.466567 TGCGAAACTGTTAACATCACAG 57.533 40.909 9.13 0.00 46.18 3.66
1590 1665 2.417586 CCGTCCCAATTTTCGGTTCTAC 59.582 50.000 0.00 0.00 38.45 2.59
1609 1684 5.118990 ACAATGTGTGGAGATAAGATTCCG 58.881 41.667 0.00 0.00 36.22 4.30
1620 1695 0.322816 CCAGGGGACAATGTGTGGAG 60.323 60.000 0.00 0.00 0.00 3.86
1623 1698 0.178992 ACACCAGGGGACAATGTGTG 60.179 55.000 0.00 0.00 37.25 3.82
1627 1702 0.405585 AGGAACACCAGGGGACAATG 59.594 55.000 0.00 0.00 0.00 2.82
1634 1709 4.166144 ACCTAAATCATAGGAACACCAGGG 59.834 45.833 8.46 0.00 38.09 4.45
1647 1722 6.947733 TGAACCAATCAGAACACCTAAATCAT 59.052 34.615 0.00 0.00 33.04 2.45
1702 1790 5.561679 GATCAAGTTAGTTCCCTTTCCACT 58.438 41.667 0.00 0.00 0.00 4.00
1726 1816 7.725295 TGAACTCTTCAATTGCAGTAGCAGAC 61.725 42.308 4.99 0.00 44.06 3.51
1731 1821 6.732531 TCATGAACTCTTCAATTGCAGTAG 57.267 37.500 4.99 4.46 43.95 2.57
1733 1823 5.708697 TGATCATGAACTCTTCAATTGCAGT 59.291 36.000 0.00 2.33 43.95 4.40
1737 1827 6.505044 TGGTGATCATGAACTCTTCAATTG 57.495 37.500 0.00 0.00 43.95 2.32
1739 1829 8.991783 AATATGGTGATCATGAACTCTTCAAT 57.008 30.769 0.00 0.00 43.95 2.57
1740 1830 8.048514 TGAATATGGTGATCATGAACTCTTCAA 58.951 33.333 0.00 0.00 43.95 2.69
1741 1831 7.567458 TGAATATGGTGATCATGAACTCTTCA 58.433 34.615 0.00 1.85 45.01 3.02
1754 1844 8.585471 AAGAACAAAGTCATGAATATGGTGAT 57.415 30.769 0.00 0.00 34.97 3.06
1762 1852 7.428826 GTTCCTGAAAGAACAAAGTCATGAAT 58.571 34.615 0.00 0.00 44.55 2.57
1764 1854 5.007626 CGTTCCTGAAAGAACAAAGTCATGA 59.992 40.000 0.00 0.00 45.27 3.07
1765 1855 5.007626 TCGTTCCTGAAAGAACAAAGTCATG 59.992 40.000 5.38 0.00 45.27 3.07
1766 1856 5.007724 GTCGTTCCTGAAAGAACAAAGTCAT 59.992 40.000 5.38 0.00 45.27 3.06
1768 1858 4.550255 CGTCGTTCCTGAAAGAACAAAGTC 60.550 45.833 5.38 0.00 45.27 3.01
1777 1870 1.344942 CCGCTCGTCGTTCCTGAAAG 61.345 60.000 0.00 0.00 36.19 2.62
1896 1989 2.107552 CCCAAACTTGTCCCCAGTAGAA 59.892 50.000 0.00 0.00 0.00 2.10
1994 2098 1.002033 CAAGGCGATAAAGCTGGCATC 60.002 52.381 0.00 0.00 37.29 3.91
2192 2297 2.808543 GTTGTCTAAGTTGACCTGCCTG 59.191 50.000 0.00 0.00 36.21 4.85
2222 2327 5.496556 TGTATACTTGCAAACCTGTAGCAT 58.503 37.500 0.00 0.00 38.19 3.79
2223 2328 4.900684 TGTATACTTGCAAACCTGTAGCA 58.099 39.130 0.00 0.80 36.32 3.49
2224 2329 5.007724 GGATGTATACTTGCAAACCTGTAGC 59.992 44.000 0.00 0.00 0.00 3.58
2225 2330 5.234329 CGGATGTATACTTGCAAACCTGTAG 59.766 44.000 0.00 0.00 0.00 2.74
2226 2331 5.113383 CGGATGTATACTTGCAAACCTGTA 58.887 41.667 0.00 0.00 0.00 2.74
2227 2332 3.938963 CGGATGTATACTTGCAAACCTGT 59.061 43.478 0.00 0.00 0.00 4.00
2228 2333 3.242739 GCGGATGTATACTTGCAAACCTG 60.243 47.826 0.00 0.00 0.00 4.00
2229 2334 2.943033 GCGGATGTATACTTGCAAACCT 59.057 45.455 0.00 0.00 0.00 3.50
2373 2478 5.305585 CCAACTTGGTAAGAGCAGAACTAA 58.694 41.667 0.00 0.00 31.35 2.24
2374 2479 4.802918 GCCAACTTGGTAAGAGCAGAACTA 60.803 45.833 9.63 0.00 40.46 2.24
2391 2496 1.003718 GGTGTAAGCCGAGCCAACT 60.004 57.895 0.00 0.00 0.00 3.16
2395 2500 2.820037 GCTGGTGTAAGCCGAGCC 60.820 66.667 0.00 0.00 37.20 4.70
2396 2501 2.047274 TGCTGGTGTAAGCCGAGC 60.047 61.111 0.00 0.00 42.83 5.03
2400 2505 4.514401 ACTAATAACTGCTGGTGTAAGCC 58.486 43.478 0.00 0.00 42.83 4.35
2518 2624 3.948473 GCCTTACTCTTCCCAAAGATTCC 59.052 47.826 0.00 0.00 40.68 3.01
2685 2791 3.577848 AGCAGAACCAATGGCAATAAACA 59.422 39.130 0.00 0.00 0.00 2.83
2686 2792 4.176271 GAGCAGAACCAATGGCAATAAAC 58.824 43.478 0.00 0.00 0.00 2.01
2702 2808 2.106938 CGCAATAGCCCGAGCAGA 59.893 61.111 0.00 0.00 43.56 4.26
2735 2841 8.654230 ATCTATGTCATGCTACTACACAAAAG 57.346 34.615 0.00 0.00 0.00 2.27
2781 2887 3.391296 AGGTTCTCTCAAACTGCTTACCA 59.609 43.478 0.00 0.00 0.00 3.25
2847 2953 4.717877 TGATGCTTCCATGGATTATCGTT 58.282 39.130 17.06 0.00 0.00 3.85
2848 2954 4.356405 TGATGCTTCCATGGATTATCGT 57.644 40.909 17.06 6.39 0.00 3.73
3054 3160 7.367285 CACTAGTGAGCTCCAGAAGTATTATC 58.633 42.308 18.45 0.00 0.00 1.75
3136 3242 0.948678 TCTTTTGCCAACGGTAGCAC 59.051 50.000 0.00 0.00 39.10 4.40
3141 3247 0.475044 TACCCTCTTTTGCCAACGGT 59.525 50.000 0.00 0.00 0.00 4.83
3150 3256 7.012421 GCAATTTCATCGTATCTACCCTCTTTT 59.988 37.037 0.00 0.00 0.00 2.27
3174 3280 4.198530 TGTCATTGAGTTTTGAGTCTGCA 58.801 39.130 0.00 0.00 0.00 4.41
3264 3370 2.950877 GAGCATCGTCGGTCTCTTG 58.049 57.895 0.00 0.00 0.00 3.02
3419 3525 0.851469 AGCCAGCCCTTCATCATCAT 59.149 50.000 0.00 0.00 0.00 2.45
3420 3526 0.106868 CAGCCAGCCCTTCATCATCA 60.107 55.000 0.00 0.00 0.00 3.07
3421 3527 0.822532 CCAGCCAGCCCTTCATCATC 60.823 60.000 0.00 0.00 0.00 2.92
3488 3603 1.831580 AGCTCCAATTCAGCAGGAAC 58.168 50.000 8.33 0.00 39.56 3.62
3706 3823 8.357402 GCAGGAGGAAATTTTGTTTAGAGTAAA 58.643 33.333 0.00 0.00 0.00 2.01
3728 3845 1.129251 CTGCATTCAGTTGTACGCAGG 59.871 52.381 7.09 0.00 42.38 4.85
3792 3916 5.519808 ACAGACAGAATACTCCCAGATGTA 58.480 41.667 0.00 0.00 0.00 2.29
3795 3919 6.436027 TCTTACAGACAGAATACTCCCAGAT 58.564 40.000 0.00 0.00 0.00 2.90
3800 3924 6.096282 AGAGCTTCTTACAGACAGAATACTCC 59.904 42.308 0.00 0.00 35.69 3.85
3801 3925 6.972328 CAGAGCTTCTTACAGACAGAATACTC 59.028 42.308 0.00 0.00 35.50 2.59
3802 3926 6.627065 GCAGAGCTTCTTACAGACAGAATACT 60.627 42.308 0.00 0.00 29.78 2.12
3837 4066 5.453903 GCTTAGGAGAACATGATAGCAGGAA 60.454 44.000 0.00 0.00 0.00 3.36
3840 4069 5.212532 AGCTTAGGAGAACATGATAGCAG 57.787 43.478 0.00 0.00 0.00 4.24
3853 4082 1.414550 GGCTTGGGTCTAGCTTAGGAG 59.585 57.143 0.00 0.00 38.67 3.69
3903 4132 7.448748 TCTTTTTCACTACCCTAAATTCTGC 57.551 36.000 0.00 0.00 0.00 4.26
3928 4197 2.680841 CCCGTTTGCGATGATTTCCTTA 59.319 45.455 0.00 0.00 41.33 2.69
4039 4412 4.991056 ACGCTATGTGCCTTGATATTAGTG 59.009 41.667 0.00 0.00 38.78 2.74
4040 4413 5.215252 ACGCTATGTGCCTTGATATTAGT 57.785 39.130 0.00 0.00 38.78 2.24
4041 4414 4.324669 CGACGCTATGTGCCTTGATATTAG 59.675 45.833 0.00 0.00 38.78 1.73
4042 4415 4.234574 CGACGCTATGTGCCTTGATATTA 58.765 43.478 0.00 0.00 38.78 0.98
4043 4416 3.059884 CGACGCTATGTGCCTTGATATT 58.940 45.455 0.00 0.00 38.78 1.28
4045 4418 1.407618 ACGACGCTATGTGCCTTGATA 59.592 47.619 0.00 0.00 38.78 2.15
4046 4419 0.175760 ACGACGCTATGTGCCTTGAT 59.824 50.000 0.00 0.00 38.78 2.57
4047 4420 0.037697 AACGACGCTATGTGCCTTGA 60.038 50.000 0.00 0.00 38.78 3.02
4048 4421 1.635844 TAACGACGCTATGTGCCTTG 58.364 50.000 0.00 0.00 38.78 3.61
4049 4422 2.373540 TTAACGACGCTATGTGCCTT 57.626 45.000 0.00 0.00 38.78 4.35
4050 4423 2.373540 TTTAACGACGCTATGTGCCT 57.626 45.000 0.00 0.00 38.78 4.75
4051 4424 2.033151 GGATTTAACGACGCTATGTGCC 60.033 50.000 0.00 0.00 38.78 5.01
4052 4425 2.864343 AGGATTTAACGACGCTATGTGC 59.136 45.455 0.00 0.00 38.57 4.57
4053 4426 3.489785 GGAGGATTTAACGACGCTATGTG 59.510 47.826 0.00 0.00 0.00 3.21
4054 4427 3.714391 GGAGGATTTAACGACGCTATGT 58.286 45.455 0.00 0.00 0.00 2.29
4055 4428 2.724690 CGGAGGATTTAACGACGCTATG 59.275 50.000 0.00 0.00 0.00 2.23
4056 4429 2.861360 GCGGAGGATTTAACGACGCTAT 60.861 50.000 0.00 0.00 41.99 2.97
4057 4430 1.534595 GCGGAGGATTTAACGACGCTA 60.535 52.381 0.00 0.00 41.99 4.26
4061 4434 3.817148 TTTTGCGGAGGATTTAACGAC 57.183 42.857 0.00 0.00 0.00 4.34
4183 4558 6.049149 TCTTTTATTAGTTGCGGAGATGGAG 58.951 40.000 0.00 0.00 0.00 3.86
4184 4559 5.984725 TCTTTTATTAGTTGCGGAGATGGA 58.015 37.500 0.00 0.00 0.00 3.41
4185 4560 6.483307 TGATCTTTTATTAGTTGCGGAGATGG 59.517 38.462 0.00 0.00 0.00 3.51
4186 4561 7.482654 TGATCTTTTATTAGTTGCGGAGATG 57.517 36.000 0.00 0.00 0.00 2.90
4187 4562 8.398665 GTTTGATCTTTTATTAGTTGCGGAGAT 58.601 33.333 0.00 0.00 0.00 2.75
4188 4563 7.412563 CGTTTGATCTTTTATTAGTTGCGGAGA 60.413 37.037 0.00 0.00 0.00 3.71
4189 4564 6.682863 CGTTTGATCTTTTATTAGTTGCGGAG 59.317 38.462 0.00 0.00 0.00 4.63
4190 4565 6.148150 ACGTTTGATCTTTTATTAGTTGCGGA 59.852 34.615 0.00 0.00 0.00 5.54
4191 4566 6.248420 CACGTTTGATCTTTTATTAGTTGCGG 59.752 38.462 0.00 0.00 0.00 5.69
4192 4567 7.012943 TCACGTTTGATCTTTTATTAGTTGCG 58.987 34.615 0.00 0.00 0.00 4.85
4193 4568 8.895932 ATCACGTTTGATCTTTTATTAGTTGC 57.104 30.769 0.00 0.00 38.08 4.17
4205 4580 8.846607 GCGTTTAAAATAAATCACGTTTGATCT 58.153 29.630 0.00 0.00 42.00 2.75
4206 4581 8.631695 TGCGTTTAAAATAAATCACGTTTGATC 58.368 29.630 0.00 0.00 42.00 2.92
4207 4582 8.421701 GTGCGTTTAAAATAAATCACGTTTGAT 58.578 29.630 0.00 0.00 44.98 2.57
4208 4583 7.096558 GGTGCGTTTAAAATAAATCACGTTTGA 60.097 33.333 0.00 0.00 35.73 2.69
4209 4584 6.999055 GGTGCGTTTAAAATAAATCACGTTTG 59.001 34.615 0.00 0.00 0.00 2.93
4210 4585 6.144241 GGGTGCGTTTAAAATAAATCACGTTT 59.856 34.615 0.00 0.00 0.00 3.60
4211 4586 5.630264 GGGTGCGTTTAAAATAAATCACGTT 59.370 36.000 0.00 0.00 0.00 3.99
4212 4587 5.155643 GGGTGCGTTTAAAATAAATCACGT 58.844 37.500 0.00 0.00 0.00 4.49
4213 4588 4.559643 GGGGTGCGTTTAAAATAAATCACG 59.440 41.667 0.00 0.00 0.00 4.35
4214 4589 5.346551 GTGGGGTGCGTTTAAAATAAATCAC 59.653 40.000 0.00 8.45 0.00 3.06
4215 4590 5.010719 TGTGGGGTGCGTTTAAAATAAATCA 59.989 36.000 0.00 0.00 0.00 2.57
4216 4591 5.471257 TGTGGGGTGCGTTTAAAATAAATC 58.529 37.500 0.00 0.00 0.00 2.17
4217 4592 5.470047 TGTGGGGTGCGTTTAAAATAAAT 57.530 34.783 0.00 0.00 0.00 1.40
4218 4593 4.931661 TGTGGGGTGCGTTTAAAATAAA 57.068 36.364 0.00 0.00 0.00 1.40
4219 4594 4.931661 TTGTGGGGTGCGTTTAAAATAA 57.068 36.364 0.00 0.00 0.00 1.40
4220 4595 4.931661 TTTGTGGGGTGCGTTTAAAATA 57.068 36.364 0.00 0.00 0.00 1.40
4221 4596 3.821421 TTTGTGGGGTGCGTTTAAAAT 57.179 38.095 0.00 0.00 0.00 1.82
4222 4597 3.259902 GTTTTGTGGGGTGCGTTTAAAA 58.740 40.909 0.00 0.00 0.00 1.52
4223 4598 2.232941 TGTTTTGTGGGGTGCGTTTAAA 59.767 40.909 0.00 0.00 0.00 1.52
4224 4599 1.822990 TGTTTTGTGGGGTGCGTTTAA 59.177 42.857 0.00 0.00 0.00 1.52
4225 4600 1.471119 TGTTTTGTGGGGTGCGTTTA 58.529 45.000 0.00 0.00 0.00 2.01
4226 4601 0.827368 ATGTTTTGTGGGGTGCGTTT 59.173 45.000 0.00 0.00 0.00 3.60
4227 4602 1.338655 GTATGTTTTGTGGGGTGCGTT 59.661 47.619 0.00 0.00 0.00 4.84
4228 4603 0.955905 GTATGTTTTGTGGGGTGCGT 59.044 50.000 0.00 0.00 0.00 5.24
4229 4604 0.955178 TGTATGTTTTGTGGGGTGCG 59.045 50.000 0.00 0.00 0.00 5.34
4230 4605 1.335506 CGTGTATGTTTTGTGGGGTGC 60.336 52.381 0.00 0.00 0.00 5.01
4231 4606 2.222886 TCGTGTATGTTTTGTGGGGTG 58.777 47.619 0.00 0.00 0.00 4.61
4232 4607 2.619646 GTTCGTGTATGTTTTGTGGGGT 59.380 45.455 0.00 0.00 0.00 4.95
4233 4608 2.030628 GGTTCGTGTATGTTTTGTGGGG 60.031 50.000 0.00 0.00 0.00 4.96
4234 4609 2.619177 TGGTTCGTGTATGTTTTGTGGG 59.381 45.455 0.00 0.00 0.00 4.61
4235 4610 3.972950 TGGTTCGTGTATGTTTTGTGG 57.027 42.857 0.00 0.00 0.00 4.17
4236 4611 4.915085 GGATTGGTTCGTGTATGTTTTGTG 59.085 41.667 0.00 0.00 0.00 3.33
4237 4612 4.022676 GGGATTGGTTCGTGTATGTTTTGT 60.023 41.667 0.00 0.00 0.00 2.83
4238 4613 4.022762 TGGGATTGGTTCGTGTATGTTTTG 60.023 41.667 0.00 0.00 0.00 2.44
4239 4614 4.022676 GTGGGATTGGTTCGTGTATGTTTT 60.023 41.667 0.00 0.00 0.00 2.43
4240 4615 3.504520 GTGGGATTGGTTCGTGTATGTTT 59.495 43.478 0.00 0.00 0.00 2.83
4241 4616 3.078837 GTGGGATTGGTTCGTGTATGTT 58.921 45.455 0.00 0.00 0.00 2.71
4242 4617 2.617021 GGTGGGATTGGTTCGTGTATGT 60.617 50.000 0.00 0.00 0.00 2.29
4243 4618 2.014128 GGTGGGATTGGTTCGTGTATG 58.986 52.381 0.00 0.00 0.00 2.39
4244 4619 1.631388 TGGTGGGATTGGTTCGTGTAT 59.369 47.619 0.00 0.00 0.00 2.29
4245 4620 1.057471 TGGTGGGATTGGTTCGTGTA 58.943 50.000 0.00 0.00 0.00 2.90
4246 4621 0.536460 GTGGTGGGATTGGTTCGTGT 60.536 55.000 0.00 0.00 0.00 4.49
4247 4622 0.536233 TGTGGTGGGATTGGTTCGTG 60.536 55.000 0.00 0.00 0.00 4.35
4248 4623 0.404040 ATGTGGTGGGATTGGTTCGT 59.596 50.000 0.00 0.00 0.00 3.85
4249 4624 1.094785 GATGTGGTGGGATTGGTTCG 58.905 55.000 0.00 0.00 0.00 3.95
4250 4625 2.214376 TGATGTGGTGGGATTGGTTC 57.786 50.000 0.00 0.00 0.00 3.62
4251 4626 2.925966 ATGATGTGGTGGGATTGGTT 57.074 45.000 0.00 0.00 0.00 3.67
4252 4627 2.925966 AATGATGTGGTGGGATTGGT 57.074 45.000 0.00 0.00 0.00 3.67
4253 4628 3.068590 GCTTAATGATGTGGTGGGATTGG 59.931 47.826 0.00 0.00 0.00 3.16
4254 4629 3.068590 GGCTTAATGATGTGGTGGGATTG 59.931 47.826 0.00 0.00 0.00 2.67
4255 4630 3.299503 GGCTTAATGATGTGGTGGGATT 58.700 45.455 0.00 0.00 0.00 3.01
4256 4631 2.424812 GGGCTTAATGATGTGGTGGGAT 60.425 50.000 0.00 0.00 0.00 3.85
4257 4632 1.064017 GGGCTTAATGATGTGGTGGGA 60.064 52.381 0.00 0.00 0.00 4.37
4258 4633 1.341877 TGGGCTTAATGATGTGGTGGG 60.342 52.381 0.00 0.00 0.00 4.61
4259 4634 1.750778 GTGGGCTTAATGATGTGGTGG 59.249 52.381 0.00 0.00 0.00 4.61
4260 4635 2.726821 AGTGGGCTTAATGATGTGGTG 58.273 47.619 0.00 0.00 0.00 4.17
4261 4636 4.584638 TTAGTGGGCTTAATGATGTGGT 57.415 40.909 0.00 0.00 0.00 4.16
4262 4637 5.380043 AGATTAGTGGGCTTAATGATGTGG 58.620 41.667 0.00 0.00 0.00 4.17
4263 4638 6.057533 TGAGATTAGTGGGCTTAATGATGTG 58.942 40.000 0.00 0.00 0.00 3.21
4264 4639 6.252599 TGAGATTAGTGGGCTTAATGATGT 57.747 37.500 0.00 0.00 0.00 3.06
4265 4640 7.664731 AGATTGAGATTAGTGGGCTTAATGATG 59.335 37.037 0.00 0.00 0.00 3.07
4266 4641 7.753630 AGATTGAGATTAGTGGGCTTAATGAT 58.246 34.615 0.00 0.00 0.00 2.45
4267 4642 7.141758 AGATTGAGATTAGTGGGCTTAATGA 57.858 36.000 0.00 0.00 0.00 2.57
4268 4643 8.778358 GTTAGATTGAGATTAGTGGGCTTAATG 58.222 37.037 0.00 0.00 0.00 1.90
4269 4644 8.718656 AGTTAGATTGAGATTAGTGGGCTTAAT 58.281 33.333 0.00 0.00 0.00 1.40
4270 4645 7.987458 CAGTTAGATTGAGATTAGTGGGCTTAA 59.013 37.037 0.00 0.00 0.00 1.85
4271 4646 7.125811 ACAGTTAGATTGAGATTAGTGGGCTTA 59.874 37.037 0.00 0.00 0.00 3.09
4272 4647 6.069963 ACAGTTAGATTGAGATTAGTGGGCTT 60.070 38.462 0.00 0.00 0.00 4.35
4273 4648 5.426833 ACAGTTAGATTGAGATTAGTGGGCT 59.573 40.000 0.00 0.00 0.00 5.19
4274 4649 5.675538 ACAGTTAGATTGAGATTAGTGGGC 58.324 41.667 0.00 0.00 0.00 5.36
4275 4650 7.560368 AGAACAGTTAGATTGAGATTAGTGGG 58.440 38.462 0.00 0.00 0.00 4.61
4276 4651 8.253810 TGAGAACAGTTAGATTGAGATTAGTGG 58.746 37.037 0.00 0.00 0.00 4.00
4277 4652 9.645059 TTGAGAACAGTTAGATTGAGATTAGTG 57.355 33.333 0.00 0.00 0.00 2.74
4281 4656 9.956640 AAGATTGAGAACAGTTAGATTGAGATT 57.043 29.630 0.00 0.00 0.00 2.40
4291 4666 9.996554 TGATCAAGTTAAGATTGAGAACAGTTA 57.003 29.630 0.00 0.00 39.86 2.24
4292 4667 8.908786 TGATCAAGTTAAGATTGAGAACAGTT 57.091 30.769 0.00 0.00 39.86 3.16
4293 4668 8.153550 ACTGATCAAGTTAAGATTGAGAACAGT 58.846 33.333 20.05 20.05 39.86 3.55
4294 4669 8.545229 ACTGATCAAGTTAAGATTGAGAACAG 57.455 34.615 19.35 19.35 39.86 3.16
4309 4684 3.890756 TGCACATGGAAAACTGATCAAGT 59.109 39.130 0.00 0.00 42.60 3.16
4310 4685 4.022589 AGTGCACATGGAAAACTGATCAAG 60.023 41.667 21.04 0.00 0.00 3.02
4311 4686 3.890756 AGTGCACATGGAAAACTGATCAA 59.109 39.130 21.04 0.00 0.00 2.57
4312 4687 3.489355 AGTGCACATGGAAAACTGATCA 58.511 40.909 21.04 0.00 0.00 2.92
4313 4688 4.510038 AAGTGCACATGGAAAACTGATC 57.490 40.909 21.04 0.00 0.00 2.92
4314 4689 4.082571 GCTAAGTGCACATGGAAAACTGAT 60.083 41.667 21.04 0.00 42.31 2.90
4315 4690 3.253188 GCTAAGTGCACATGGAAAACTGA 59.747 43.478 21.04 0.00 42.31 3.41
4316 4691 3.568538 GCTAAGTGCACATGGAAAACTG 58.431 45.455 21.04 0.00 42.31 3.16
4317 4692 3.923017 GCTAAGTGCACATGGAAAACT 57.077 42.857 21.04 0.00 42.31 2.66
4329 4704 6.524586 GTCAGTCAATACAAATTGCTAAGTGC 59.475 38.462 0.00 0.00 41.96 4.40
4330 4705 7.023575 GGTCAGTCAATACAAATTGCTAAGTG 58.976 38.462 0.00 0.00 41.96 3.16
4331 4706 6.714810 TGGTCAGTCAATACAAATTGCTAAGT 59.285 34.615 0.00 0.00 41.96 2.24
4332 4707 7.144722 TGGTCAGTCAATACAAATTGCTAAG 57.855 36.000 0.00 0.00 41.96 2.18
4333 4708 7.701539 ATGGTCAGTCAATACAAATTGCTAA 57.298 32.000 0.00 0.00 41.96 3.09
4334 4709 8.046708 AGTATGGTCAGTCAATACAAATTGCTA 58.953 33.333 0.00 0.00 41.96 3.49
4335 4710 6.886459 AGTATGGTCAGTCAATACAAATTGCT 59.114 34.615 0.00 0.00 41.96 3.91
4336 4711 7.088589 AGTATGGTCAGTCAATACAAATTGC 57.911 36.000 0.00 0.00 41.96 3.56
4337 4712 7.336679 TGGAGTATGGTCAGTCAATACAAATTG 59.663 37.037 0.00 0.00 43.32 2.32
4338 4713 7.336931 GTGGAGTATGGTCAGTCAATACAAATT 59.663 37.037 0.00 0.00 0.00 1.82
4339 4714 6.823689 GTGGAGTATGGTCAGTCAATACAAAT 59.176 38.462 0.00 0.00 0.00 2.32
4340 4715 6.170506 GTGGAGTATGGTCAGTCAATACAAA 58.829 40.000 0.00 0.00 0.00 2.83
4341 4716 5.338056 GGTGGAGTATGGTCAGTCAATACAA 60.338 44.000 0.00 0.00 0.00 2.41
4342 4717 4.161565 GGTGGAGTATGGTCAGTCAATACA 59.838 45.833 0.00 0.00 0.00 2.29
4343 4718 4.443034 GGGTGGAGTATGGTCAGTCAATAC 60.443 50.000 0.00 0.00 0.00 1.89
4344 4719 3.709653 GGGTGGAGTATGGTCAGTCAATA 59.290 47.826 0.00 0.00 0.00 1.90
4345 4720 2.505819 GGGTGGAGTATGGTCAGTCAAT 59.494 50.000 0.00 0.00 0.00 2.57
4346 4721 1.906574 GGGTGGAGTATGGTCAGTCAA 59.093 52.381 0.00 0.00 0.00 3.18
4347 4722 1.203250 TGGGTGGAGTATGGTCAGTCA 60.203 52.381 0.00 0.00 0.00 3.41
4348 4723 1.568504 TGGGTGGAGTATGGTCAGTC 58.431 55.000 0.00 0.00 0.00 3.51
4349 4724 1.909302 CTTGGGTGGAGTATGGTCAGT 59.091 52.381 0.00 0.00 0.00 3.41
4350 4725 1.210478 CCTTGGGTGGAGTATGGTCAG 59.790 57.143 0.00 0.00 0.00 3.51
4351 4726 1.203376 TCCTTGGGTGGAGTATGGTCA 60.203 52.381 0.00 0.00 0.00 4.02
4352 4727 1.209747 GTCCTTGGGTGGAGTATGGTC 59.790 57.143 0.00 0.00 36.69 4.02
4353 4728 1.203440 AGTCCTTGGGTGGAGTATGGT 60.203 52.381 0.00 0.00 37.96 3.55
4354 4729 1.584724 AGTCCTTGGGTGGAGTATGG 58.415 55.000 0.00 0.00 37.96 2.74
4355 4730 4.408921 TGATTAGTCCTTGGGTGGAGTATG 59.591 45.833 0.00 0.00 40.52 2.39
4356 4731 4.409247 GTGATTAGTCCTTGGGTGGAGTAT 59.591 45.833 0.00 0.00 40.52 2.12
4357 4732 3.773119 GTGATTAGTCCTTGGGTGGAGTA 59.227 47.826 0.00 0.00 40.10 2.59
4358 4733 2.572104 GTGATTAGTCCTTGGGTGGAGT 59.428 50.000 0.00 0.00 42.08 3.85
4359 4734 2.092914 GGTGATTAGTCCTTGGGTGGAG 60.093 54.545 0.00 0.00 36.69 3.86
4360 4735 1.913419 GGTGATTAGTCCTTGGGTGGA 59.087 52.381 0.00 0.00 0.00 4.02
4361 4736 1.064685 GGGTGATTAGTCCTTGGGTGG 60.065 57.143 0.00 0.00 0.00 4.61
4362 4737 1.064685 GGGGTGATTAGTCCTTGGGTG 60.065 57.143 0.00 0.00 0.00 4.61
4363 4738 1.296002 GGGGTGATTAGTCCTTGGGT 58.704 55.000 0.00 0.00 0.00 4.51
4364 4739 0.180406 CGGGGTGATTAGTCCTTGGG 59.820 60.000 0.00 0.00 0.00 4.12
4365 4740 0.909623 ACGGGGTGATTAGTCCTTGG 59.090 55.000 0.00 0.00 0.00 3.61
4366 4741 1.553248 TCACGGGGTGATTAGTCCTTG 59.447 52.381 0.00 0.00 37.67 3.61
4367 4742 1.946984 TCACGGGGTGATTAGTCCTT 58.053 50.000 0.00 0.00 37.67 3.36
4368 4743 1.946984 TTCACGGGGTGATTAGTCCT 58.053 50.000 0.00 0.00 42.40 3.85
4369 4744 2.773993 TTTCACGGGGTGATTAGTCC 57.226 50.000 0.00 0.00 42.40 3.85
4387 4762 6.072673 CGGCTGTGATTAGTAGTTTCCTTTTT 60.073 38.462 0.00 0.00 0.00 1.94
4388 4763 5.411669 CGGCTGTGATTAGTAGTTTCCTTTT 59.588 40.000 0.00 0.00 0.00 2.27
4389 4764 4.935808 CGGCTGTGATTAGTAGTTTCCTTT 59.064 41.667 0.00 0.00 0.00 3.11
4390 4765 4.222145 TCGGCTGTGATTAGTAGTTTCCTT 59.778 41.667 0.00 0.00 0.00 3.36
4391 4766 3.767673 TCGGCTGTGATTAGTAGTTTCCT 59.232 43.478 0.00 0.00 0.00 3.36
4392 4767 4.119442 TCGGCTGTGATTAGTAGTTTCC 57.881 45.455 0.00 0.00 0.00 3.13
4393 4768 4.745620 GGATCGGCTGTGATTAGTAGTTTC 59.254 45.833 0.00 0.00 0.00 2.78
4394 4769 4.443034 GGGATCGGCTGTGATTAGTAGTTT 60.443 45.833 0.00 0.00 0.00 2.66
4395 4770 3.069729 GGGATCGGCTGTGATTAGTAGTT 59.930 47.826 0.00 0.00 0.00 2.24
4396 4771 2.628657 GGGATCGGCTGTGATTAGTAGT 59.371 50.000 0.00 0.00 0.00 2.73
4397 4772 2.894126 AGGGATCGGCTGTGATTAGTAG 59.106 50.000 0.00 0.00 0.00 2.57
4398 4773 2.958818 AGGGATCGGCTGTGATTAGTA 58.041 47.619 0.00 0.00 0.00 1.82
4399 4774 1.794714 AGGGATCGGCTGTGATTAGT 58.205 50.000 0.00 0.00 0.00 2.24
4400 4775 5.452496 CCATATAGGGATCGGCTGTGATTAG 60.452 48.000 0.00 0.00 0.00 1.73
4401 4776 4.405680 CCATATAGGGATCGGCTGTGATTA 59.594 45.833 0.00 0.00 0.00 1.75
4402 4777 3.198635 CCATATAGGGATCGGCTGTGATT 59.801 47.826 0.00 0.00 0.00 2.57
4403 4778 2.768527 CCATATAGGGATCGGCTGTGAT 59.231 50.000 0.00 0.00 0.00 3.06
4404 4779 2.179427 CCATATAGGGATCGGCTGTGA 58.821 52.381 0.00 0.00 0.00 3.58
4405 4780 1.902508 ACCATATAGGGATCGGCTGTG 59.097 52.381 11.11 0.00 43.89 3.66
4406 4781 2.180276 GACCATATAGGGATCGGCTGT 58.820 52.381 11.11 0.00 43.89 4.40
4407 4782 2.179427 TGACCATATAGGGATCGGCTG 58.821 52.381 11.11 0.00 43.89 4.85
4408 4783 2.567615 GTTGACCATATAGGGATCGGCT 59.432 50.000 11.11 0.00 43.89 5.52
4409 4784 2.354805 GGTTGACCATATAGGGATCGGC 60.355 54.545 11.11 1.79 43.89 5.54
4410 4785 2.903784 TGGTTGACCATATAGGGATCGG 59.096 50.000 11.11 0.00 42.01 4.18
4411 4786 4.617253 TTGGTTGACCATATAGGGATCG 57.383 45.455 11.11 0.00 46.97 3.69
4412 4787 7.505585 TCATTTTTGGTTGACCATATAGGGATC 59.494 37.037 11.11 4.87 46.97 3.36
4413 4788 7.361438 TCATTTTTGGTTGACCATATAGGGAT 58.639 34.615 11.11 0.00 46.97 3.85
4414 4789 6.736581 TCATTTTTGGTTGACCATATAGGGA 58.263 36.000 11.11 0.00 46.97 4.20
4415 4790 6.461509 GCTCATTTTTGGTTGACCATATAGGG 60.462 42.308 0.82 0.82 46.97 3.53
4416 4791 6.096705 TGCTCATTTTTGGTTGACCATATAGG 59.903 38.462 3.28 0.00 46.97 2.57
4417 4792 6.974622 GTGCTCATTTTTGGTTGACCATATAG 59.025 38.462 3.28 0.00 46.97 1.31
4418 4793 6.127479 GGTGCTCATTTTTGGTTGACCATATA 60.127 38.462 3.28 0.00 46.97 0.86
4419 4794 5.337491 GGTGCTCATTTTTGGTTGACCATAT 60.337 40.000 3.28 0.00 46.97 1.78
4420 4795 4.021544 GGTGCTCATTTTTGGTTGACCATA 60.022 41.667 3.28 0.00 46.97 2.74
4421 4796 3.244181 GGTGCTCATTTTTGGTTGACCAT 60.244 43.478 3.28 0.00 46.97 3.55
4422 4797 2.102252 GGTGCTCATTTTTGGTTGACCA 59.898 45.455 0.00 0.00 45.94 4.02
4423 4798 2.547855 GGGTGCTCATTTTTGGTTGACC 60.548 50.000 0.00 0.00 0.00 4.02
4424 4799 2.547855 GGGGTGCTCATTTTTGGTTGAC 60.548 50.000 0.00 0.00 0.00 3.18
4425 4800 1.691434 GGGGTGCTCATTTTTGGTTGA 59.309 47.619 0.00 0.00 0.00 3.18
4426 4801 1.415659 TGGGGTGCTCATTTTTGGTTG 59.584 47.619 0.00 0.00 0.00 3.77
4427 4802 1.416030 GTGGGGTGCTCATTTTTGGTT 59.584 47.619 0.00 0.00 0.00 3.67
4428 4803 1.047801 GTGGGGTGCTCATTTTTGGT 58.952 50.000 0.00 0.00 0.00 3.67
4429 4804 3.912899 GTGGGGTGCTCATTTTTGG 57.087 52.632 0.00 0.00 0.00 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.