Multiple sequence alignment - TraesCS7B01G029100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G029100 chr7B 100.000 2719 0 0 1 2719 27596198 27593480 0.000000e+00 5022.0
1 TraesCS7B01G029100 chr7B 97.924 289 6 0 50 338 720720763 720721051 4.040000e-138 501.0
2 TraesCS7B01G029100 chr7B 83.299 479 41 14 1008 1453 27487009 27486537 3.260000e-109 405.0
3 TraesCS7B01G029100 chr7B 86.567 201 16 6 140 339 680754974 680755164 7.630000e-51 211.0
4 TraesCS7B01G029100 chr7B 91.304 92 6 2 339 429 553024196 553024106 1.020000e-24 124.0
5 TraesCS7B01G029100 chr4B 97.529 607 11 4 2115 2719 278424940 278425544 0.000000e+00 1035.0
6 TraesCS7B01G029100 chr4B 95.581 611 20 6 2111 2719 609749397 609748792 0.000000e+00 972.0
7 TraesCS7B01G029100 chr4B 94.040 302 10 1 37 338 608783096 608783389 4.130000e-123 451.0
8 TraesCS7B01G029100 chr2B 96.911 615 18 1 2106 2719 94941297 94941911 0.000000e+00 1029.0
9 TraesCS7B01G029100 chr2B 97.368 608 9 2 2113 2719 357177417 357176816 0.000000e+00 1027.0
10 TraesCS7B01G029100 chr2B 95.878 558 19 4 2163 2719 470513488 470512934 0.000000e+00 900.0
11 TraesCS7B01G029100 chr2B 85.227 88 10 3 2101 2186 765481210 765481296 1.340000e-13 87.9
12 TraesCS7B01G029100 chr1B 97.044 609 15 3 2113 2719 220382967 220383574 0.000000e+00 1022.0
13 TraesCS7B01G029100 chr1B 87.317 205 15 6 138 341 447168735 447168541 9.800000e-55 224.0
14 TraesCS7B01G029100 chr1B 89.583 96 9 1 335 429 593010681 593010776 1.320000e-23 121.0
15 TraesCS7B01G029100 chr5B 96.540 607 18 3 2114 2719 199499867 199499263 0.000000e+00 1002.0
16 TraesCS7B01G029100 chr5B 95.270 592 25 3 2129 2719 673106758 673107347 0.000000e+00 935.0
17 TraesCS7B01G029100 chr3B 96.535 606 17 4 2115 2719 51770857 51770255 0.000000e+00 1000.0
18 TraesCS7B01G029100 chr3B 94.040 302 10 1 37 338 113486988 113487281 4.130000e-123 451.0
19 TraesCS7B01G029100 chr3B 93.069 303 12 2 37 339 495273372 495273079 4.160000e-118 435.0
20 TraesCS7B01G029100 chr3B 86.700 203 16 6 138 339 79291757 79291949 5.900000e-52 215.0
21 TraesCS7B01G029100 chr7A 88.602 658 71 1 1465 2118 83225149 83224492 0.000000e+00 797.0
22 TraesCS7B01G029100 chr7A 92.409 303 15 1 37 339 53280797 53280503 2.500000e-115 425.0
23 TraesCS7B01G029100 chr7A 81.081 481 50 13 1008 1453 83142415 83141941 2.000000e-91 346.0
24 TraesCS7B01G029100 chr7A 91.707 205 14 1 1252 1453 83106453 83106249 5.730000e-72 281.0
25 TraesCS7B01G029100 chr7A 89.109 202 12 3 138 339 30925646 30925837 2.700000e-60 243.0
26 TraesCS7B01G029100 chr7A 88.406 207 15 2 1252 1452 83157733 83157530 9.730000e-60 241.0
27 TraesCS7B01G029100 chr7A 75.758 165 25 9 980 1130 83106755 83106592 4.860000e-08 69.4
28 TraesCS7B01G029100 chr7D 88.911 496 41 7 964 1453 80417619 80417132 1.390000e-167 599.0
29 TraesCS7B01G029100 chr7D 87.578 483 35 15 428 902 80418105 80417640 1.110000e-148 536.0
30 TraesCS7B01G029100 chr7D 82.215 641 94 14 1502 2130 80462262 80461630 3.990000e-148 534.0
31 TraesCS7B01G029100 chr7D 87.569 362 45 0 1445 1806 80470431 80470070 1.160000e-113 420.0
32 TraesCS7B01G029100 chr7D 83.297 461 34 16 1014 1437 80198800 80198346 4.250000e-103 385.0
33 TraesCS7B01G029100 chr7D 93.522 247 12 2 1207 1453 80298487 80298245 5.530000e-97 364.0
34 TraesCS7B01G029100 chr7D 89.474 247 16 4 1207 1453 80462496 80462260 1.220000e-78 303.0
35 TraesCS7B01G029100 chr7D 88.417 259 20 2 84 340 439324919 439325169 1.220000e-78 303.0
36 TraesCS7B01G029100 chr7D 83.333 330 38 11 1811 2130 80469751 80469429 3.430000e-74 289.0
37 TraesCS7B01G029100 chr7D 83.030 330 39 11 1811 2130 80325032 80324710 1.590000e-72 283.0
38 TraesCS7B01G029100 chr7D 90.526 95 7 2 335 428 606792978 606792885 1.020000e-24 124.0
39 TraesCS7B01G029100 chr7D 92.308 39 3 0 988 1026 80298666 80298628 3.780000e-04 56.5
40 TraesCS7B01G029100 chr3A 94.040 302 10 1 37 338 660275145 660274852 4.130000e-123 451.0
41 TraesCS7B01G029100 chr3A 91.667 96 7 1 335 429 737821687 737821782 6.110000e-27 132.0
42 TraesCS7B01G029100 chr1A 94.040 302 10 1 37 338 48032927 48032634 4.130000e-123 451.0
43 TraesCS7B01G029100 chr6B 93.377 302 12 1 37 338 172763139 172762846 8.940000e-120 440.0
44 TraesCS7B01G029100 chr3D 92.739 303 14 1 37 339 19289774 19290068 5.380000e-117 431.0
45 TraesCS7B01G029100 chr3D 90.426 94 7 2 340 431 110587548 110587455 3.680000e-24 122.0
46 TraesCS7B01G029100 chr1D 92.715 302 14 1 37 338 398943775 398943482 1.930000e-116 429.0
47 TraesCS7B01G029100 chr1D 92.308 91 6 1 339 428 455993839 455993749 7.900000e-26 128.0
48 TraesCS7B01G029100 chr5A 91.060 302 19 4 37 338 693358273 693358566 4.220000e-108 401.0
49 TraesCS7B01G029100 chr4A 88.119 202 14 7 138 339 540959719 540959910 5.860000e-57 231.0
50 TraesCS7B01G029100 chr4A 91.304 92 6 2 339 429 600683427 600683337 1.020000e-24 124.0
51 TraesCS7B01G029100 chr6D 92.222 90 6 1 339 428 467983511 467983599 2.840000e-25 126.0
52 TraesCS7B01G029100 chr4D 92.222 90 6 1 339 428 451694023 451693935 2.840000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G029100 chr7B 27593480 27596198 2718 True 5022.0 5022 100.0000 1 2719 1 chr7B.!!$R2 2718
1 TraesCS7B01G029100 chr4B 278424940 278425544 604 False 1035.0 1035 97.5290 2115 2719 1 chr4B.!!$F1 604
2 TraesCS7B01G029100 chr4B 609748792 609749397 605 True 972.0 972 95.5810 2111 2719 1 chr4B.!!$R1 608
3 TraesCS7B01G029100 chr2B 94941297 94941911 614 False 1029.0 1029 96.9110 2106 2719 1 chr2B.!!$F1 613
4 TraesCS7B01G029100 chr2B 357176816 357177417 601 True 1027.0 1027 97.3680 2113 2719 1 chr2B.!!$R1 606
5 TraesCS7B01G029100 chr2B 470512934 470513488 554 True 900.0 900 95.8780 2163 2719 1 chr2B.!!$R2 556
6 TraesCS7B01G029100 chr1B 220382967 220383574 607 False 1022.0 1022 97.0440 2113 2719 1 chr1B.!!$F1 606
7 TraesCS7B01G029100 chr5B 199499263 199499867 604 True 1002.0 1002 96.5400 2114 2719 1 chr5B.!!$R1 605
8 TraesCS7B01G029100 chr5B 673106758 673107347 589 False 935.0 935 95.2700 2129 2719 1 chr5B.!!$F1 590
9 TraesCS7B01G029100 chr3B 51770255 51770857 602 True 1000.0 1000 96.5350 2115 2719 1 chr3B.!!$R1 604
10 TraesCS7B01G029100 chr7A 83224492 83225149 657 True 797.0 797 88.6020 1465 2118 1 chr7A.!!$R4 653
11 TraesCS7B01G029100 chr7D 80417132 80418105 973 True 567.5 599 88.2445 428 1453 2 chr7D.!!$R5 1025
12 TraesCS7B01G029100 chr7D 80461630 80462496 866 True 418.5 534 85.8445 1207 2130 2 chr7D.!!$R6 923
13 TraesCS7B01G029100 chr7D 80469429 80470431 1002 True 354.5 420 85.4510 1445 2130 2 chr7D.!!$R7 685

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
133 134 0.036010 CATGGTCTTGAGAAGGCGGT 60.036 55.0 0.00 0.0 32.70 5.68 F
315 316 0.112218 CCAATTGGACCACCCTGACA 59.888 55.0 20.50 0.0 37.39 3.58 F
761 776 0.179026 CTCCGGATCGACCTCCACTA 60.179 60.0 3.57 0.0 34.78 2.74 F
1122 1140 0.179161 CACTCTTCCTTCGCGACGAT 60.179 55.0 14.93 0.0 35.23 3.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1095 1113 0.603975 GAAGGAAGAGTGGCAGCGTT 60.604 55.000 0.0 0.0 0.00 4.84 R
1450 1477 0.689623 GGCTCCTCCCATACATCTGG 59.310 60.000 0.0 0.0 35.95 3.86 R
1612 1657 1.133407 ACGCCAACGATTTTGTGTTGT 59.867 42.857 0.0 0.0 42.99 3.32 R
2007 2376 6.119144 ACTCAAAATTTCGGGTCATATTCG 57.881 37.500 0.0 0.0 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.562454 TCTAATTCAAAGAACAACTTCCGTT 57.438 32.000 0.00 0.00 37.93 4.44
25 26 7.992008 TCTAATTCAAAGAACAACTTCCGTTT 58.008 30.769 0.00 0.00 37.93 3.60
26 27 9.111613 TCTAATTCAAAGAACAACTTCCGTTTA 57.888 29.630 0.00 0.00 37.93 2.01
27 28 7.980742 AATTCAAAGAACAACTTCCGTTTAC 57.019 32.000 0.00 0.00 37.93 2.01
28 29 6.746745 TTCAAAGAACAACTTCCGTTTACT 57.253 33.333 0.00 0.00 37.93 2.24
29 30 6.354039 TCAAAGAACAACTTCCGTTTACTC 57.646 37.500 0.00 0.00 37.93 2.59
30 31 6.110707 TCAAAGAACAACTTCCGTTTACTCT 58.889 36.000 0.00 0.00 37.93 3.24
31 32 5.986004 AAGAACAACTTCCGTTTACTCTG 57.014 39.130 0.00 0.00 32.91 3.35
32 33 5.272283 AGAACAACTTCCGTTTACTCTGA 57.728 39.130 0.00 0.00 0.00 3.27
33 34 5.667466 AGAACAACTTCCGTTTACTCTGAA 58.333 37.500 0.00 0.00 0.00 3.02
34 35 5.753921 AGAACAACTTCCGTTTACTCTGAAG 59.246 40.000 0.00 0.00 39.99 3.02
35 36 5.272283 ACAACTTCCGTTTACTCTGAAGA 57.728 39.130 5.22 0.00 38.05 2.87
36 37 5.855045 ACAACTTCCGTTTACTCTGAAGAT 58.145 37.500 5.22 0.00 38.05 2.40
37 38 6.289064 ACAACTTCCGTTTACTCTGAAGATT 58.711 36.000 5.22 0.00 38.05 2.40
38 39 6.766467 ACAACTTCCGTTTACTCTGAAGATTT 59.234 34.615 5.22 0.00 38.05 2.17
39 40 6.787085 ACTTCCGTTTACTCTGAAGATTTG 57.213 37.500 5.22 0.00 38.05 2.32
40 41 6.522054 ACTTCCGTTTACTCTGAAGATTTGA 58.478 36.000 5.22 0.00 38.05 2.69
41 42 6.990349 ACTTCCGTTTACTCTGAAGATTTGAA 59.010 34.615 5.22 0.00 38.05 2.69
42 43 6.780706 TCCGTTTACTCTGAAGATTTGAAC 57.219 37.500 0.00 0.00 0.00 3.18
43 44 5.404366 TCCGTTTACTCTGAAGATTTGAACG 59.596 40.000 10.03 10.03 37.62 3.95
44 45 5.404366 CCGTTTACTCTGAAGATTTGAACGA 59.596 40.000 15.12 0.00 39.51 3.85
45 46 6.090898 CCGTTTACTCTGAAGATTTGAACGAT 59.909 38.462 15.12 0.00 39.51 3.73
46 47 7.360101 CCGTTTACTCTGAAGATTTGAACGATT 60.360 37.037 15.12 0.00 39.51 3.34
47 48 8.009974 CGTTTACTCTGAAGATTTGAACGATTT 58.990 33.333 10.92 0.00 39.51 2.17
48 49 9.319223 GTTTACTCTGAAGATTTGAACGATTTC 57.681 33.333 0.00 0.00 0.00 2.17
49 50 6.487689 ACTCTGAAGATTTGAACGATTTCC 57.512 37.500 0.00 0.00 0.00 3.13
50 51 6.234177 ACTCTGAAGATTTGAACGATTTCCT 58.766 36.000 0.00 0.00 0.00 3.36
51 52 7.386851 ACTCTGAAGATTTGAACGATTTCCTA 58.613 34.615 0.00 0.00 0.00 2.94
52 53 7.547370 ACTCTGAAGATTTGAACGATTTCCTAG 59.453 37.037 0.00 0.00 0.00 3.02
53 54 7.386851 TCTGAAGATTTGAACGATTTCCTAGT 58.613 34.615 0.00 0.00 0.00 2.57
54 55 7.545965 TCTGAAGATTTGAACGATTTCCTAGTC 59.454 37.037 0.00 0.00 0.00 2.59
55 56 7.158697 TGAAGATTTGAACGATTTCCTAGTCA 58.841 34.615 0.00 0.00 0.00 3.41
56 57 6.969828 AGATTTGAACGATTTCCTAGTCAC 57.030 37.500 0.00 0.00 0.00 3.67
57 58 6.464222 AGATTTGAACGATTTCCTAGTCACA 58.536 36.000 0.00 0.00 0.00 3.58
58 59 7.106239 AGATTTGAACGATTTCCTAGTCACAT 58.894 34.615 0.00 0.00 0.00 3.21
59 60 8.258007 AGATTTGAACGATTTCCTAGTCACATA 58.742 33.333 0.00 0.00 0.00 2.29
60 61 7.591006 TTTGAACGATTTCCTAGTCACATAC 57.409 36.000 0.00 0.00 0.00 2.39
61 62 6.275494 TGAACGATTTCCTAGTCACATACA 57.725 37.500 0.00 0.00 0.00 2.29
62 63 6.873997 TGAACGATTTCCTAGTCACATACAT 58.126 36.000 0.00 0.00 0.00 2.29
63 64 6.756542 TGAACGATTTCCTAGTCACATACATG 59.243 38.462 0.00 0.00 0.00 3.21
64 65 5.601662 ACGATTTCCTAGTCACATACATGG 58.398 41.667 0.00 0.00 0.00 3.66
65 66 5.362717 ACGATTTCCTAGTCACATACATGGA 59.637 40.000 0.00 0.00 32.26 3.41
66 67 6.127168 ACGATTTCCTAGTCACATACATGGAA 60.127 38.462 0.00 0.00 38.85 3.53
67 68 6.201044 CGATTTCCTAGTCACATACATGGAAC 59.799 42.308 0.00 0.00 39.69 3.62
68 69 4.649088 TCCTAGTCACATACATGGAACG 57.351 45.455 0.00 0.00 31.52 3.95
69 70 4.274978 TCCTAGTCACATACATGGAACGA 58.725 43.478 0.00 0.00 31.52 3.85
70 71 4.338400 TCCTAGTCACATACATGGAACGAG 59.662 45.833 0.00 0.00 31.52 4.18
71 72 4.338400 CCTAGTCACATACATGGAACGAGA 59.662 45.833 0.00 0.00 0.00 4.04
72 73 5.010112 CCTAGTCACATACATGGAACGAGAT 59.990 44.000 0.00 0.00 0.00 2.75
73 74 4.686972 AGTCACATACATGGAACGAGATG 58.313 43.478 0.00 0.00 0.00 2.90
74 75 3.246226 GTCACATACATGGAACGAGATGC 59.754 47.826 0.00 0.00 0.00 3.91
75 76 3.132824 TCACATACATGGAACGAGATGCT 59.867 43.478 0.00 0.00 0.00 3.79
76 77 3.873361 CACATACATGGAACGAGATGCTT 59.127 43.478 0.00 0.00 0.00 3.91
77 78 4.333649 CACATACATGGAACGAGATGCTTT 59.666 41.667 0.00 0.00 0.00 3.51
78 79 4.572389 ACATACATGGAACGAGATGCTTTC 59.428 41.667 0.00 0.00 0.00 2.62
79 80 3.340814 ACATGGAACGAGATGCTTTCT 57.659 42.857 0.00 0.00 37.41 2.52
80 81 3.265791 ACATGGAACGAGATGCTTTCTC 58.734 45.455 0.00 7.06 46.36 2.87
89 90 4.676849 GAGATGCTTTCTCCAAAGTGAC 57.323 45.455 6.09 0.00 44.46 3.67
90 91 4.322567 GAGATGCTTTCTCCAAAGTGACT 58.677 43.478 6.09 0.00 44.46 3.41
91 92 4.070716 AGATGCTTTCTCCAAAGTGACTG 58.929 43.478 0.00 0.00 41.18 3.51
92 93 3.558931 TGCTTTCTCCAAAGTGACTGA 57.441 42.857 0.00 0.00 41.18 3.41
93 94 3.884895 TGCTTTCTCCAAAGTGACTGAA 58.115 40.909 0.00 0.00 41.18 3.02
94 95 3.879295 TGCTTTCTCCAAAGTGACTGAAG 59.121 43.478 0.00 0.00 41.18 3.02
95 96 4.130118 GCTTTCTCCAAAGTGACTGAAGA 58.870 43.478 0.00 0.00 41.18 2.87
96 97 4.759183 GCTTTCTCCAAAGTGACTGAAGAT 59.241 41.667 0.00 0.00 41.18 2.40
97 98 5.934625 GCTTTCTCCAAAGTGACTGAAGATA 59.065 40.000 0.00 0.00 41.18 1.98
98 99 6.428159 GCTTTCTCCAAAGTGACTGAAGATAA 59.572 38.462 0.00 0.00 41.18 1.75
99 100 7.041098 GCTTTCTCCAAAGTGACTGAAGATAAA 60.041 37.037 0.00 0.00 41.18 1.40
100 101 8.746052 TTTCTCCAAAGTGACTGAAGATAAAA 57.254 30.769 0.00 0.00 0.00 1.52
101 102 8.924511 TTCTCCAAAGTGACTGAAGATAAAAT 57.075 30.769 0.00 0.00 0.00 1.82
123 124 9.918630 AAAATAATTGAGACTTTCATGGTCTTG 57.081 29.630 4.83 0.00 43.13 3.02
124 125 8.868522 AATAATTGAGACTTTCATGGTCTTGA 57.131 30.769 4.83 0.00 43.13 3.02
125 126 6.814506 AATTGAGACTTTCATGGTCTTGAG 57.185 37.500 4.83 0.00 43.13 3.02
126 127 5.551305 TTGAGACTTTCATGGTCTTGAGA 57.449 39.130 4.83 0.00 43.13 3.27
127 128 5.551305 TGAGACTTTCATGGTCTTGAGAA 57.449 39.130 4.83 0.00 43.13 2.87
128 129 5.545588 TGAGACTTTCATGGTCTTGAGAAG 58.454 41.667 4.83 0.00 43.13 2.85
129 130 4.904241 AGACTTTCATGGTCTTGAGAAGG 58.096 43.478 0.00 0.00 40.65 3.46
130 131 3.416156 ACTTTCATGGTCTTGAGAAGGC 58.584 45.455 0.00 0.00 0.00 4.35
131 132 2.099141 TTCATGGTCTTGAGAAGGCG 57.901 50.000 0.00 0.00 32.70 5.52
132 133 0.250234 TCATGGTCTTGAGAAGGCGG 59.750 55.000 0.00 0.00 32.70 6.13
133 134 0.036010 CATGGTCTTGAGAAGGCGGT 60.036 55.000 0.00 0.00 32.70 5.68
134 135 1.207089 CATGGTCTTGAGAAGGCGGTA 59.793 52.381 0.00 0.00 32.70 4.02
135 136 1.568504 TGGTCTTGAGAAGGCGGTAT 58.431 50.000 0.00 0.00 32.70 2.73
136 137 2.742348 TGGTCTTGAGAAGGCGGTATA 58.258 47.619 0.00 0.00 32.70 1.47
137 138 2.429610 TGGTCTTGAGAAGGCGGTATAC 59.570 50.000 0.00 0.00 32.70 1.47
138 139 2.223994 GGTCTTGAGAAGGCGGTATACC 60.224 54.545 12.27 12.27 32.70 2.73
153 154 5.978934 GGTATACCGACAAATAAGGTGTG 57.021 43.478 6.06 0.00 38.90 3.82
154 155 5.422145 GGTATACCGACAAATAAGGTGTGT 58.578 41.667 6.06 0.00 38.90 3.72
155 156 5.521372 GGTATACCGACAAATAAGGTGTGTC 59.479 44.000 6.06 0.00 38.90 3.67
156 157 3.478857 ACCGACAAATAAGGTGTGTCA 57.521 42.857 4.14 0.00 41.42 3.58
157 158 4.015872 ACCGACAAATAAGGTGTGTCAT 57.984 40.909 4.14 0.00 41.42 3.06
158 159 5.155278 ACCGACAAATAAGGTGTGTCATA 57.845 39.130 4.14 0.00 41.42 2.15
159 160 5.741011 ACCGACAAATAAGGTGTGTCATAT 58.259 37.500 4.14 0.00 41.42 1.78
160 161 6.177610 ACCGACAAATAAGGTGTGTCATATT 58.822 36.000 4.14 0.00 41.42 1.28
161 162 6.657541 ACCGACAAATAAGGTGTGTCATATTT 59.342 34.615 4.14 0.00 41.42 1.40
162 163 7.175990 ACCGACAAATAAGGTGTGTCATATTTT 59.824 33.333 4.14 0.00 41.42 1.82
163 164 8.670135 CCGACAAATAAGGTGTGTCATATTTTA 58.330 33.333 4.14 0.00 41.42 1.52
164 165 9.485591 CGACAAATAAGGTGTGTCATATTTTAC 57.514 33.333 4.14 0.00 41.42 2.01
165 166 9.485591 GACAAATAAGGTGTGTCATATTTTACG 57.514 33.333 0.00 0.00 41.09 3.18
166 167 7.966204 ACAAATAAGGTGTGTCATATTTTACGC 59.034 33.333 0.00 0.00 0.00 4.42
167 168 7.618502 AATAAGGTGTGTCATATTTTACGCA 57.381 32.000 0.00 0.00 33.93 5.24
168 169 5.950758 AAGGTGTGTCATATTTTACGCAA 57.049 34.783 0.00 0.00 37.81 4.85
169 170 5.950758 AGGTGTGTCATATTTTACGCAAA 57.049 34.783 0.00 0.00 37.81 3.68
170 171 6.509418 AGGTGTGTCATATTTTACGCAAAT 57.491 33.333 0.00 0.00 37.81 2.32
171 172 6.321717 AGGTGTGTCATATTTTACGCAAATG 58.678 36.000 3.90 0.00 37.81 2.32
172 173 6.072175 AGGTGTGTCATATTTTACGCAAATGT 60.072 34.615 3.90 0.00 37.81 2.71
173 174 7.119992 AGGTGTGTCATATTTTACGCAAATGTA 59.880 33.333 3.90 0.00 37.81 2.29
174 175 7.751348 GGTGTGTCATATTTTACGCAAATGTAA 59.249 33.333 3.90 0.00 37.81 2.41
175 176 9.119329 GTGTGTCATATTTTACGCAAATGTAAA 57.881 29.630 3.90 0.00 41.28 2.01
184 185 8.462143 TTTTACGCAAATGTAAAACTTGAACA 57.538 26.923 7.51 0.00 44.85 3.18
185 186 8.635877 TTTACGCAAATGTAAAACTTGAACAT 57.364 26.923 0.00 0.00 40.37 2.71
186 187 6.509317 ACGCAAATGTAAAACTTGAACATG 57.491 33.333 0.00 0.00 34.20 3.21
187 188 6.269315 ACGCAAATGTAAAACTTGAACATGA 58.731 32.000 0.00 0.00 34.20 3.07
188 189 6.754209 ACGCAAATGTAAAACTTGAACATGAA 59.246 30.769 0.00 0.00 34.20 2.57
189 190 7.437862 ACGCAAATGTAAAACTTGAACATGAAT 59.562 29.630 0.00 0.00 34.20 2.57
190 191 8.274939 CGCAAATGTAAAACTTGAACATGAATT 58.725 29.630 0.00 0.00 34.20 2.17
191 192 9.934190 GCAAATGTAAAACTTGAACATGAATTT 57.066 25.926 0.00 0.00 34.20 1.82
205 206 9.433153 TGAACATGAATTTTAATATGCTTTGCA 57.567 25.926 0.00 0.00 44.86 4.08
208 209 9.656040 ACATGAATTTTAATATGCTTTGCAAGA 57.344 25.926 0.00 0.00 43.62 3.02
209 210 9.910511 CATGAATTTTAATATGCTTTGCAAGAC 57.089 29.630 0.00 0.00 43.62 3.01
210 211 8.477984 TGAATTTTAATATGCTTTGCAAGACC 57.522 30.769 0.00 0.00 43.62 3.85
211 212 8.313292 TGAATTTTAATATGCTTTGCAAGACCT 58.687 29.630 0.00 0.00 43.62 3.85
212 213 9.154847 GAATTTTAATATGCTTTGCAAGACCTT 57.845 29.630 0.00 0.00 43.62 3.50
216 217 9.585099 TTTAATATGCTTTGCAAGACCTTATTG 57.415 29.630 0.00 0.00 43.62 1.90
217 218 7.408756 AATATGCTTTGCAAGACCTTATTGA 57.591 32.000 0.00 0.00 43.62 2.57
218 219 5.927281 ATGCTTTGCAAGACCTTATTGAT 57.073 34.783 0.00 0.00 43.62 2.57
219 220 8.696043 ATATGCTTTGCAAGACCTTATTGATA 57.304 30.769 0.00 0.00 43.62 2.15
220 221 7.592885 ATGCTTTGCAAGACCTTATTGATAT 57.407 32.000 0.00 0.00 43.62 1.63
221 222 7.031226 TGCTTTGCAAGACCTTATTGATATC 57.969 36.000 0.00 0.00 34.76 1.63
222 223 6.602803 TGCTTTGCAAGACCTTATTGATATCA 59.397 34.615 0.00 0.00 34.76 2.15
223 224 7.286087 TGCTTTGCAAGACCTTATTGATATCAT 59.714 33.333 6.17 0.00 34.76 2.45
224 225 7.594015 GCTTTGCAAGACCTTATTGATATCATG 59.406 37.037 6.17 0.00 0.00 3.07
225 226 8.750515 TTTGCAAGACCTTATTGATATCATGA 57.249 30.769 6.17 0.00 0.00 3.07
226 227 8.929260 TTGCAAGACCTTATTGATATCATGAT 57.071 30.769 13.81 13.81 0.00 2.45
232 233 9.610705 AGACCTTATTGATATCATGATATGTGC 57.389 33.333 28.79 16.72 34.36 4.57
233 234 9.610705 GACCTTATTGATATCATGATATGTGCT 57.389 33.333 28.79 14.57 34.36 4.40
234 235 9.970553 ACCTTATTGATATCATGATATGTGCTT 57.029 29.630 28.79 8.32 34.36 3.91
238 239 8.873186 ATTGATATCATGATATGTGCTTTGGA 57.127 30.769 28.79 1.01 34.36 3.53
239 240 8.873186 TTGATATCATGATATGTGCTTTGGAT 57.127 30.769 28.79 5.97 34.36 3.41
240 241 9.962809 TTGATATCATGATATGTGCTTTGGATA 57.037 29.630 28.79 0.36 34.36 2.59
251 252 9.970395 ATATGTGCTTTGGATATATTTTGTGTG 57.030 29.630 0.00 0.00 0.00 3.82
252 253 6.098679 TGTGCTTTGGATATATTTTGTGTGC 58.901 36.000 0.00 0.00 0.00 4.57
253 254 6.098679 GTGCTTTGGATATATTTTGTGTGCA 58.901 36.000 0.00 0.00 0.00 4.57
254 255 6.757947 GTGCTTTGGATATATTTTGTGTGCAT 59.242 34.615 0.00 0.00 0.00 3.96
255 256 7.920151 GTGCTTTGGATATATTTTGTGTGCATA 59.080 33.333 0.00 0.00 0.00 3.14
256 257 8.640651 TGCTTTGGATATATTTTGTGTGCATAT 58.359 29.630 0.00 0.00 0.00 1.78
257 258 8.918658 GCTTTGGATATATTTTGTGTGCATATG 58.081 33.333 0.00 0.00 0.00 1.78
258 259 9.970395 CTTTGGATATATTTTGTGTGCATATGT 57.030 29.630 4.29 0.00 0.00 2.29
260 261 9.747293 TTGGATATATTTTGTGTGCATATGTTG 57.253 29.630 4.29 0.00 0.00 3.33
261 262 8.358895 TGGATATATTTTGTGTGCATATGTTGG 58.641 33.333 4.29 0.00 0.00 3.77
262 263 8.359642 GGATATATTTTGTGTGCATATGTTGGT 58.640 33.333 4.29 0.00 0.00 3.67
263 264 9.748708 GATATATTTTGTGTGCATATGTTGGTT 57.251 29.630 4.29 0.00 0.00 3.67
264 265 9.748708 ATATATTTTGTGTGCATATGTTGGTTC 57.251 29.630 4.29 0.00 0.00 3.62
265 266 3.550950 TTGTGTGCATATGTTGGTTCG 57.449 42.857 4.29 0.00 0.00 3.95
266 267 2.499197 TGTGTGCATATGTTGGTTCGT 58.501 42.857 4.29 0.00 0.00 3.85
267 268 2.881513 TGTGTGCATATGTTGGTTCGTT 59.118 40.909 4.29 0.00 0.00 3.85
268 269 4.065789 TGTGTGCATATGTTGGTTCGTTA 58.934 39.130 4.29 0.00 0.00 3.18
269 270 4.515567 TGTGTGCATATGTTGGTTCGTTAA 59.484 37.500 4.29 0.00 0.00 2.01
270 271 5.008712 TGTGTGCATATGTTGGTTCGTTAAA 59.991 36.000 4.29 0.00 0.00 1.52
271 272 6.090129 GTGTGCATATGTTGGTTCGTTAAAT 58.910 36.000 4.29 0.00 0.00 1.40
272 273 6.584563 GTGTGCATATGTTGGTTCGTTAAATT 59.415 34.615 4.29 0.00 0.00 1.82
273 274 7.115663 GTGTGCATATGTTGGTTCGTTAAATTT 59.884 33.333 4.29 0.00 0.00 1.82
274 275 7.115520 TGTGCATATGTTGGTTCGTTAAATTTG 59.884 33.333 4.29 0.00 0.00 2.32
275 276 7.115663 GTGCATATGTTGGTTCGTTAAATTTGT 59.884 33.333 4.29 0.00 0.00 2.83
276 277 7.115520 TGCATATGTTGGTTCGTTAAATTTGTG 59.884 33.333 4.29 0.00 0.00 3.33
277 278 7.411372 GCATATGTTGGTTCGTTAAATTTGTGG 60.411 37.037 4.29 0.00 0.00 4.17
278 279 5.326200 TGTTGGTTCGTTAAATTTGTGGT 57.674 34.783 0.00 0.00 0.00 4.16
279 280 5.103000 TGTTGGTTCGTTAAATTTGTGGTG 58.897 37.500 0.00 0.00 0.00 4.17
280 281 4.985538 TGGTTCGTTAAATTTGTGGTGT 57.014 36.364 0.00 0.00 0.00 4.16
281 282 6.127814 TGTTGGTTCGTTAAATTTGTGGTGTA 60.128 34.615 0.00 0.00 0.00 2.90
282 283 6.446781 TGGTTCGTTAAATTTGTGGTGTAA 57.553 33.333 0.00 0.00 0.00 2.41
283 284 6.860080 TGGTTCGTTAAATTTGTGGTGTAAA 58.140 32.000 0.00 0.00 0.00 2.01
284 285 7.490000 TGGTTCGTTAAATTTGTGGTGTAAAT 58.510 30.769 0.00 0.00 0.00 1.40
285 286 7.980099 TGGTTCGTTAAATTTGTGGTGTAAATT 59.020 29.630 0.00 0.00 38.88 1.82
286 287 8.819015 GGTTCGTTAAATTTGTGGTGTAAATTT 58.181 29.630 0.00 11.62 44.97 1.82
296 297 9.943163 ATTTGTGGTGTAAATTTTATTTTGTGC 57.057 25.926 0.00 0.00 0.00 4.57
297 298 7.484035 TGTGGTGTAAATTTTATTTTGTGCC 57.516 32.000 0.00 0.00 0.00 5.01
298 299 7.047891 TGTGGTGTAAATTTTATTTTGTGCCA 58.952 30.769 0.00 0.00 0.00 4.92
299 300 7.552687 TGTGGTGTAAATTTTATTTTGTGCCAA 59.447 29.630 0.00 0.00 0.00 4.52
300 301 8.563732 GTGGTGTAAATTTTATTTTGTGCCAAT 58.436 29.630 0.00 0.00 0.00 3.16
301 302 9.125026 TGGTGTAAATTTTATTTTGTGCCAATT 57.875 25.926 0.00 0.00 0.00 2.32
302 303 9.392021 GGTGTAAATTTTATTTTGTGCCAATTG 57.608 29.630 0.00 0.00 0.00 2.32
303 304 9.392021 GTGTAAATTTTATTTTGTGCCAATTGG 57.608 29.630 20.81 20.81 38.53 3.16
304 305 9.342308 TGTAAATTTTATTTTGTGCCAATTGGA 57.658 25.926 29.02 10.48 37.39 3.53
305 306 9.605955 GTAAATTTTATTTTGTGCCAATTGGAC 57.394 29.630 29.02 21.23 37.39 4.02
306 307 6.816134 ATTTTATTTTGTGCCAATTGGACC 57.184 33.333 29.02 16.76 37.39 4.46
307 308 4.963318 TTATTTTGTGCCAATTGGACCA 57.037 36.364 29.02 19.16 37.39 4.02
308 309 2.611225 TTTTGTGCCAATTGGACCAC 57.389 45.000 29.02 24.74 37.39 4.16
309 310 0.755686 TTTGTGCCAATTGGACCACC 59.244 50.000 29.02 10.32 37.39 4.61
310 311 1.118356 TTGTGCCAATTGGACCACCC 61.118 55.000 29.02 9.57 37.39 4.61
311 312 1.228862 GTGCCAATTGGACCACCCT 60.229 57.895 29.02 0.00 37.39 4.34
312 313 1.228831 TGCCAATTGGACCACCCTG 60.229 57.895 29.02 0.00 37.39 4.45
313 314 1.076549 GCCAATTGGACCACCCTGA 59.923 57.895 29.02 0.00 37.39 3.86
314 315 1.250840 GCCAATTGGACCACCCTGAC 61.251 60.000 29.02 2.02 37.39 3.51
315 316 0.112218 CCAATTGGACCACCCTGACA 59.888 55.000 20.50 0.00 37.39 3.58
316 317 1.272648 CCAATTGGACCACCCTGACAT 60.273 52.381 20.50 0.00 37.39 3.06
317 318 2.025416 CCAATTGGACCACCCTGACATA 60.025 50.000 20.50 0.00 37.39 2.29
318 319 3.563261 CCAATTGGACCACCCTGACATAA 60.563 47.826 20.50 0.00 37.39 1.90
319 320 4.085733 CAATTGGACCACCCTGACATAAA 58.914 43.478 0.00 0.00 35.38 1.40
320 321 3.885976 TTGGACCACCCTGACATAAAA 57.114 42.857 0.00 0.00 35.38 1.52
321 322 4.396357 TTGGACCACCCTGACATAAAAT 57.604 40.909 0.00 0.00 35.38 1.82
322 323 3.963129 TGGACCACCCTGACATAAAATC 58.037 45.455 0.00 0.00 35.38 2.17
323 324 3.288092 GGACCACCCTGACATAAAATCC 58.712 50.000 0.00 0.00 0.00 3.01
324 325 3.053619 GGACCACCCTGACATAAAATCCT 60.054 47.826 0.00 0.00 0.00 3.24
325 326 3.947834 GACCACCCTGACATAAAATCCTG 59.052 47.826 0.00 0.00 0.00 3.86
326 327 3.290710 CCACCCTGACATAAAATCCTGG 58.709 50.000 0.00 0.00 0.00 4.45
327 328 2.689983 CACCCTGACATAAAATCCTGGC 59.310 50.000 0.00 0.00 0.00 4.85
328 329 2.582636 ACCCTGACATAAAATCCTGGCT 59.417 45.455 0.00 0.00 0.00 4.75
329 330 3.785887 ACCCTGACATAAAATCCTGGCTA 59.214 43.478 0.00 0.00 0.00 3.93
330 331 4.137543 CCCTGACATAAAATCCTGGCTAC 58.862 47.826 0.00 0.00 0.00 3.58
331 332 3.809832 CCTGACATAAAATCCTGGCTACG 59.190 47.826 0.00 0.00 0.00 3.51
332 333 3.202906 TGACATAAAATCCTGGCTACGC 58.797 45.455 0.00 0.00 0.00 4.42
343 344 3.655481 GCTACGCCACTGCTTTGT 58.345 55.556 0.00 0.00 34.43 2.83
344 345 2.835605 GCTACGCCACTGCTTTGTA 58.164 52.632 0.00 0.00 34.43 2.41
345 346 1.153353 GCTACGCCACTGCTTTGTAA 58.847 50.000 0.00 0.00 34.43 2.41
346 347 1.128692 GCTACGCCACTGCTTTGTAAG 59.871 52.381 0.00 0.00 34.43 2.34
347 348 2.413837 CTACGCCACTGCTTTGTAAGT 58.586 47.619 0.00 0.00 34.43 2.24
348 349 1.675552 ACGCCACTGCTTTGTAAGTT 58.324 45.000 0.00 0.00 34.43 2.66
349 350 1.602377 ACGCCACTGCTTTGTAAGTTC 59.398 47.619 0.00 0.00 34.43 3.01
350 351 1.069227 CGCCACTGCTTTGTAAGTTCC 60.069 52.381 0.00 0.00 34.43 3.62
351 352 2.230660 GCCACTGCTTTGTAAGTTCCT 58.769 47.619 0.00 0.00 33.53 3.36
352 353 2.623416 GCCACTGCTTTGTAAGTTCCTT 59.377 45.455 0.00 0.00 33.53 3.36
353 354 3.550842 GCCACTGCTTTGTAAGTTCCTTG 60.551 47.826 0.00 0.00 33.53 3.61
354 355 3.882888 CCACTGCTTTGTAAGTTCCTTGA 59.117 43.478 0.00 0.00 0.00 3.02
355 356 4.023707 CCACTGCTTTGTAAGTTCCTTGAG 60.024 45.833 0.00 0.00 0.00 3.02
356 357 4.816385 CACTGCTTTGTAAGTTCCTTGAGA 59.184 41.667 0.00 0.00 0.00 3.27
357 358 5.296780 CACTGCTTTGTAAGTTCCTTGAGAA 59.703 40.000 0.00 0.00 0.00 2.87
358 359 6.016777 CACTGCTTTGTAAGTTCCTTGAGAAT 60.017 38.462 0.00 0.00 36.69 2.40
359 360 7.173218 CACTGCTTTGTAAGTTCCTTGAGAATA 59.827 37.037 0.00 0.00 36.69 1.75
360 361 7.719633 ACTGCTTTGTAAGTTCCTTGAGAATAA 59.280 33.333 0.00 0.00 36.69 1.40
361 362 7.871853 TGCTTTGTAAGTTCCTTGAGAATAAC 58.128 34.615 0.00 0.00 36.69 1.89
362 363 7.040686 TGCTTTGTAAGTTCCTTGAGAATAACC 60.041 37.037 0.00 0.00 36.69 2.85
363 364 7.040686 GCTTTGTAAGTTCCTTGAGAATAACCA 60.041 37.037 0.00 0.00 36.69 3.67
364 365 8.754991 TTTGTAAGTTCCTTGAGAATAACCAA 57.245 30.769 0.00 0.00 36.69 3.67
365 366 8.934023 TTGTAAGTTCCTTGAGAATAACCAAT 57.066 30.769 0.00 0.00 36.69 3.16
374 375 8.966868 TCCTTGAGAATAACCAATAAAATGACC 58.033 33.333 0.00 0.00 0.00 4.02
375 376 7.915397 CCTTGAGAATAACCAATAAAATGACCG 59.085 37.037 0.00 0.00 0.00 4.79
376 377 6.791303 TGAGAATAACCAATAAAATGACCGC 58.209 36.000 0.00 0.00 0.00 5.68
377 378 6.375736 TGAGAATAACCAATAAAATGACCGCA 59.624 34.615 0.00 0.00 0.00 5.69
378 379 7.068103 TGAGAATAACCAATAAAATGACCGCAT 59.932 33.333 0.00 0.00 35.92 4.73
379 380 7.202526 AGAATAACCAATAAAATGACCGCATG 58.797 34.615 0.00 0.00 34.26 4.06
380 381 3.163630 ACCAATAAAATGACCGCATGC 57.836 42.857 7.91 7.91 34.26 4.06
381 382 2.495270 ACCAATAAAATGACCGCATGCA 59.505 40.909 19.57 0.00 34.26 3.96
382 383 3.132646 ACCAATAAAATGACCGCATGCAT 59.867 39.130 19.57 4.56 34.26 3.96
383 384 3.737266 CCAATAAAATGACCGCATGCATC 59.263 43.478 19.57 14.88 34.26 3.91
384 385 4.500205 CCAATAAAATGACCGCATGCATCT 60.500 41.667 19.57 0.00 34.26 2.90
385 386 2.857592 AAAATGACCGCATGCATCTC 57.142 45.000 19.57 8.81 34.26 2.75
386 387 1.027357 AAATGACCGCATGCATCTCC 58.973 50.000 19.57 2.12 34.26 3.71
387 388 0.820891 AATGACCGCATGCATCTCCC 60.821 55.000 19.57 0.65 34.26 4.30
388 389 1.986632 ATGACCGCATGCATCTCCCA 61.987 55.000 19.57 6.58 32.31 4.37
389 390 1.890979 GACCGCATGCATCTCCCAG 60.891 63.158 19.57 0.00 0.00 4.45
390 391 2.315781 GACCGCATGCATCTCCCAGA 62.316 60.000 19.57 0.00 0.00 3.86
391 392 1.072678 CCGCATGCATCTCCCAGAT 59.927 57.895 19.57 0.00 34.74 2.90
399 400 1.421480 CATCTCCCAGATGCAGAGGA 58.579 55.000 0.61 0.63 44.69 3.71
400 401 1.070445 CATCTCCCAGATGCAGAGGAC 59.930 57.143 0.61 0.00 44.69 3.85
401 402 1.039785 TCTCCCAGATGCAGAGGACG 61.040 60.000 3.61 0.00 0.00 4.79
402 403 2.025767 CTCCCAGATGCAGAGGACGG 62.026 65.000 3.61 0.00 0.00 4.79
403 404 2.503061 CCAGATGCAGAGGACGGG 59.497 66.667 0.00 0.00 0.00 5.28
404 405 2.503061 CAGATGCAGAGGACGGGG 59.497 66.667 0.00 0.00 0.00 5.73
405 406 2.039624 AGATGCAGAGGACGGGGT 59.960 61.111 0.00 0.00 0.00 4.95
406 407 2.060980 AGATGCAGAGGACGGGGTC 61.061 63.158 0.00 0.00 0.00 4.46
407 408 2.284625 ATGCAGAGGACGGGGTCA 60.285 61.111 0.00 0.00 33.68 4.02
408 409 1.690219 GATGCAGAGGACGGGGTCAT 61.690 60.000 0.00 0.00 33.68 3.06
409 410 1.690219 ATGCAGAGGACGGGGTCATC 61.690 60.000 2.45 2.45 42.66 2.92
410 411 3.095347 GCAGAGGACGGGGTCATCC 62.095 68.421 6.78 0.00 43.24 3.51
413 414 2.041819 AGGACGGGGTCATCCTCC 60.042 66.667 0.00 0.00 41.83 4.30
414 415 2.041819 GGACGGGGTCATCCTCCT 60.042 66.667 0.00 0.00 33.68 3.69
415 416 1.689582 GGACGGGGTCATCCTCCTT 60.690 63.158 0.00 0.00 33.68 3.36
416 417 1.272554 GGACGGGGTCATCCTCCTTT 61.273 60.000 0.00 0.00 33.68 3.11
417 418 0.618981 GACGGGGTCATCCTCCTTTT 59.381 55.000 0.00 0.00 35.33 2.27
418 419 1.004394 GACGGGGTCATCCTCCTTTTT 59.996 52.381 0.00 0.00 35.33 1.94
465 474 0.457166 GCGTGTGCATGCATGAATGT 60.457 50.000 30.64 0.00 42.66 2.71
472 481 1.924629 GCATGCATGAATGTAGCAGCG 60.925 52.381 30.64 0.00 42.14 5.18
478 487 2.689553 TGAATGTAGCAGCGATTCCA 57.310 45.000 10.60 0.00 0.00 3.53
484 493 0.687757 TAGCAGCGATTCCAGGACCT 60.688 55.000 0.00 0.00 0.00 3.85
498 507 2.520020 ACCTGGACCGTGTCGTGA 60.520 61.111 0.00 0.00 32.65 4.35
499 508 2.258591 CCTGGACCGTGTCGTGAG 59.741 66.667 0.00 0.00 32.65 3.51
501 510 3.916392 CTGGACCGTGTCGTGAGCC 62.916 68.421 0.00 0.00 32.65 4.70
502 511 4.736896 GGACCGTGTCGTGAGCCC 62.737 72.222 0.00 0.00 32.65 5.19
598 608 1.526575 AAAACGGGCAGGCACATCAG 61.527 55.000 0.00 0.00 0.00 2.90
606 616 0.968901 CAGGCACATCAGCATGGGTT 60.969 55.000 0.00 0.00 42.15 4.11
761 776 0.179026 CTCCGGATCGACCTCCACTA 60.179 60.000 3.57 0.00 34.78 2.74
762 777 0.477204 TCCGGATCGACCTCCACTAT 59.523 55.000 0.00 0.00 34.78 2.12
771 789 1.360551 CCTCCACTATCACCGAGCG 59.639 63.158 0.00 0.00 0.00 5.03
776 794 0.589229 CACTATCACCGAGCGTCGAC 60.589 60.000 5.18 5.18 43.74 4.20
807 825 7.405292 CCATCTAATATCTCTCTCCAGTCTCT 58.595 42.308 0.00 0.00 0.00 3.10
836 854 4.823419 TGCGTATTGTCGGCCCCG 62.823 66.667 0.00 0.00 41.35 5.73
898 916 1.328680 CATCGATGCTACTGTGTTGCC 59.671 52.381 13.37 0.00 33.72 4.52
902 920 0.391661 ATGCTACTGTGTTGCCGGAG 60.392 55.000 5.05 0.00 33.72 4.63
903 921 1.004918 GCTACTGTGTTGCCGGAGT 60.005 57.895 5.05 0.00 0.00 3.85
904 922 0.245539 GCTACTGTGTTGCCGGAGTA 59.754 55.000 5.05 1.29 0.00 2.59
905 923 1.992170 CTACTGTGTTGCCGGAGTAC 58.008 55.000 5.05 0.00 0.00 2.73
906 924 0.241749 TACTGTGTTGCCGGAGTACG 59.758 55.000 5.05 0.00 43.80 3.67
912 930 2.344981 TTGCCGGAGTACGCAGCTA 61.345 57.895 5.05 2.51 42.52 3.32
914 932 2.026301 CCGGAGTACGCAGCTAGC 59.974 66.667 6.62 6.62 42.52 3.42
915 933 2.482333 CCGGAGTACGCAGCTAGCT 61.482 63.158 12.68 12.68 42.61 3.32
931 949 4.477302 CTAGCTTAGCTACCTCGAAGTC 57.523 50.000 10.21 0.00 40.44 3.01
932 950 3.007473 AGCTTAGCTACCTCGAAGTCT 57.993 47.619 4.30 0.00 36.99 3.24
933 951 3.358118 AGCTTAGCTACCTCGAAGTCTT 58.642 45.455 4.30 0.00 36.99 3.01
934 952 3.379057 AGCTTAGCTACCTCGAAGTCTTC 59.621 47.826 4.30 2.18 36.99 2.87
935 953 3.128938 GCTTAGCTACCTCGAAGTCTTCA 59.871 47.826 12.99 0.00 0.00 3.02
936 954 4.380655 GCTTAGCTACCTCGAAGTCTTCAA 60.381 45.833 12.99 0.00 0.00 2.69
937 955 3.579335 AGCTACCTCGAAGTCTTCAAC 57.421 47.619 12.99 0.00 0.00 3.18
938 956 3.158676 AGCTACCTCGAAGTCTTCAACT 58.841 45.455 12.99 0.00 41.10 3.16
939 957 3.057174 AGCTACCTCGAAGTCTTCAACTG 60.057 47.826 12.99 0.94 38.58 3.16
940 958 3.305471 GCTACCTCGAAGTCTTCAACTGT 60.305 47.826 12.99 6.39 38.58 3.55
941 959 3.099267 ACCTCGAAGTCTTCAACTGTG 57.901 47.619 12.99 0.00 38.58 3.66
942 960 2.693591 ACCTCGAAGTCTTCAACTGTGA 59.306 45.455 12.99 0.16 38.58 3.58
943 961 3.322254 ACCTCGAAGTCTTCAACTGTGAT 59.678 43.478 12.99 0.00 38.58 3.06
944 962 3.923461 CCTCGAAGTCTTCAACTGTGATC 59.077 47.826 12.99 0.00 38.58 2.92
945 963 4.550422 CTCGAAGTCTTCAACTGTGATCA 58.450 43.478 12.99 0.00 38.58 2.92
946 964 4.550422 TCGAAGTCTTCAACTGTGATCAG 58.450 43.478 12.99 0.00 46.18 2.90
947 965 4.278419 TCGAAGTCTTCAACTGTGATCAGA 59.722 41.667 12.99 0.00 43.76 3.27
948 966 5.047731 TCGAAGTCTTCAACTGTGATCAGAT 60.048 40.000 12.99 0.00 43.76 2.90
949 967 5.288232 CGAAGTCTTCAACTGTGATCAGATC 59.712 44.000 12.99 3.11 43.76 2.75
950 968 5.735285 AGTCTTCAACTGTGATCAGATCA 57.265 39.130 9.21 9.21 43.76 2.92
960 978 2.031870 TGATCAGATCACGTACAGGGG 58.968 52.381 9.21 0.00 33.59 4.79
961 979 2.307768 GATCAGATCACGTACAGGGGA 58.692 52.381 5.44 0.00 0.00 4.81
962 980 2.225382 TCAGATCACGTACAGGGGAA 57.775 50.000 0.00 0.00 0.00 3.97
963 981 2.531771 TCAGATCACGTACAGGGGAAA 58.468 47.619 0.00 0.00 0.00 3.13
964 982 2.232941 TCAGATCACGTACAGGGGAAAC 59.767 50.000 0.00 0.00 0.00 2.78
978 996 2.027625 GAAACCGCTGTCCTGTCCG 61.028 63.158 0.00 0.00 0.00 4.79
994 1012 3.522731 CGAGGAGAGGAGCCACCG 61.523 72.222 0.00 0.00 44.74 4.94
1087 1105 1.956629 GAAGGAGGCGTTCGGGATCA 61.957 60.000 0.00 0.00 0.00 2.92
1095 1113 1.079405 GTTCGGGATCAACGAGGCA 60.079 57.895 10.88 0.00 41.81 4.75
1096 1114 0.672401 GTTCGGGATCAACGAGGCAA 60.672 55.000 10.88 0.00 41.81 4.52
1097 1115 0.672401 TTCGGGATCAACGAGGCAAC 60.672 55.000 10.88 0.00 41.81 4.17
1113 1131 0.886490 CAACGCTGCCACTCTTCCTT 60.886 55.000 0.00 0.00 0.00 3.36
1122 1140 0.179161 CACTCTTCCTTCGCGACGAT 60.179 55.000 14.93 0.00 35.23 3.73
1125 1143 0.179171 TCTTCCTTCGCGACGATGAC 60.179 55.000 14.93 0.00 35.23 3.06
1126 1144 1.464429 CTTCCTTCGCGACGATGACG 61.464 60.000 14.93 0.13 45.75 4.35
1127 1145 1.914531 TTCCTTCGCGACGATGACGA 61.915 55.000 14.93 0.00 42.66 4.20
1128 1146 2.215604 CCTTCGCGACGATGACGAC 61.216 63.158 14.93 0.00 42.66 4.34
1171 1195 2.409870 GCTCGCCACTGGGAAATGG 61.410 63.158 0.00 0.00 39.16 3.16
1185 1209 2.288395 GGAAATGGGCAACAAGTGAGTG 60.288 50.000 0.00 0.00 39.74 3.51
1186 1210 2.071778 AATGGGCAACAAGTGAGTGT 57.928 45.000 0.00 0.00 39.74 3.55
1194 1218 3.849645 GCAACAAGTGAGTGTTTCATCGG 60.850 47.826 0.00 0.00 39.73 4.18
1201 1225 2.218603 GAGTGTTTCATCGGTGGTGTT 58.781 47.619 0.00 0.00 0.00 3.32
1203 1227 1.265905 GTGTTTCATCGGTGGTGTTCC 59.734 52.381 0.00 0.00 0.00 3.62
1204 1228 1.134068 TGTTTCATCGGTGGTGTTCCA 60.134 47.619 0.00 0.00 42.05 3.53
1205 1229 2.159382 GTTTCATCGGTGGTGTTCCAT 58.841 47.619 0.00 0.00 46.20 3.41
1206 1230 1.819928 TTCATCGGTGGTGTTCCATG 58.180 50.000 0.00 0.00 46.20 3.66
1207 1231 0.676466 TCATCGGTGGTGTTCCATGC 60.676 55.000 0.00 0.00 46.20 4.06
1209 1233 2.837031 ATCGGTGGTGTTCCATGCCC 62.837 60.000 0.00 0.00 46.20 5.36
1210 1234 2.440599 GGTGGTGTTCCATGCCCT 59.559 61.111 0.00 0.00 46.20 5.19
1250 1274 1.423845 GCAGGGTCGCGTGTAATTG 59.576 57.895 5.77 0.00 0.00 2.32
1292 1316 4.778143 GTGGCCGCCGGTGAAGAT 62.778 66.667 18.79 0.00 0.00 2.40
1400 1424 2.066999 CCTCCTACCACCAGCTCCC 61.067 68.421 0.00 0.00 0.00 4.30
1429 1456 2.370445 CGCCTCATGTTCCCCTCCT 61.370 63.158 0.00 0.00 0.00 3.69
1431 1458 1.988982 GCCTCATGTTCCCCTCCTCC 61.989 65.000 0.00 0.00 0.00 4.30
1432 1459 0.621571 CCTCATGTTCCCCTCCTCCA 60.622 60.000 0.00 0.00 0.00 3.86
1434 1461 0.914417 TCATGTTCCCCTCCTCCACC 60.914 60.000 0.00 0.00 0.00 4.61
1435 1462 1.163309 ATGTTCCCCTCCTCCACCA 59.837 57.895 0.00 0.00 0.00 4.17
1436 1463 0.477597 ATGTTCCCCTCCTCCACCAA 60.478 55.000 0.00 0.00 0.00 3.67
1441 1468 0.916358 CCCCTCCTCCACCAATCACT 60.916 60.000 0.00 0.00 0.00 3.41
1472 1499 1.831652 GATGTATGGGAGGAGCCGGG 61.832 65.000 2.18 0.00 37.63 5.73
1526 1553 2.758089 CGGTCACCTACGAGGACGG 61.758 68.421 7.76 0.00 44.46 4.79
1533 1560 1.152819 CTACGAGGACGGGGATGGA 60.153 63.158 0.00 0.00 44.46 3.41
1543 1570 1.050988 CGGGGATGGAGACTGGATGT 61.051 60.000 0.00 0.00 0.00 3.06
1585 1630 4.517832 GGGAGTAAGTCGTGGTTTCATTTT 59.482 41.667 0.00 0.00 0.00 1.82
1606 1651 3.234353 TCCTGTCTATGCATCGAATCCT 58.766 45.455 0.19 0.00 0.00 3.24
1611 1656 3.059325 GTCTATGCATCGAATCCTGTTGC 60.059 47.826 0.19 0.00 33.67 4.17
1612 1657 1.753930 ATGCATCGAATCCTGTTGCA 58.246 45.000 9.77 9.77 43.74 4.08
1637 1682 3.303397 AAAATCGTTGGCGTCGCGG 62.303 57.895 11.75 0.42 39.49 6.46
1652 1697 2.605818 GTCGCGGCTAACAACATTATCA 59.394 45.455 1.90 0.00 0.00 2.15
1721 1766 5.163683 GCTCAAGATACTACTCGTGTAACCA 60.164 44.000 0.00 0.00 0.00 3.67
1753 1798 4.874970 CTTGCCATTGCTAGTTGAGTTTT 58.125 39.130 0.00 0.00 35.88 2.43
1755 1800 3.636300 TGCCATTGCTAGTTGAGTTTTGT 59.364 39.130 0.00 0.00 38.71 2.83
1769 1814 5.132502 TGAGTTTTGTTGTCATGGATCTGT 58.867 37.500 0.00 0.00 0.00 3.41
1772 1817 6.299141 AGTTTTGTTGTCATGGATCTGTACT 58.701 36.000 0.00 0.00 0.00 2.73
1791 1836 2.356553 GCCGGCGTGTGTGACTAA 60.357 61.111 12.58 0.00 0.00 2.24
1803 1848 6.231365 CGTGTGTGACTAATTAGTTTTAGCG 58.769 40.000 18.96 14.58 36.50 4.26
1877 2242 2.163509 TGAGTTTCTCTCTCAGGTCCG 58.836 52.381 0.00 0.00 43.13 4.79
1901 2270 6.194508 CGATGTTTAATCGGCAACATAACAAG 59.805 38.462 0.70 0.00 42.46 3.16
1904 2273 7.203910 TGTTTAATCGGCAACATAACAAGTTT 58.796 30.769 0.00 0.00 0.00 2.66
1942 2311 7.978982 AGTGTCGGAGAATTATTTCAGAATTG 58.021 34.615 0.56 0.00 39.69 2.32
1961 2330 8.408601 CAGAATTGGATCCATCGAAATTTACTT 58.591 33.333 17.06 0.00 29.45 2.24
1990 2359 5.482163 AATGGGTTTTGACCGAATTTGAT 57.518 34.783 0.00 0.00 0.00 2.57
1991 2360 4.250116 TGGGTTTTGACCGAATTTGATG 57.750 40.909 0.00 0.00 0.00 3.07
2007 2376 9.305110 CGAATTTGATGTTTGTTTGAAATTAGC 57.695 29.630 0.00 0.00 0.00 3.09
2065 2434 2.691984 ACACGCGGAAATTACCAAAC 57.308 45.000 12.47 0.00 0.00 2.93
2067 2436 2.619646 ACACGCGGAAATTACCAAACTT 59.380 40.909 12.47 0.00 0.00 2.66
2088 2458 7.609760 ACTTTTGGAGAAATTGTTGGTTTTC 57.390 32.000 0.00 0.00 33.08 2.29
2093 2463 7.654022 TGGAGAAATTGTTGGTTTTCTAACT 57.346 32.000 0.00 0.00 41.12 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 7.291567 GTTCAAATCTTCAGAGTAAACGGAAG 58.708 38.462 0.00 0.00 41.12 3.46
18 19 6.073980 CGTTCAAATCTTCAGAGTAAACGGAA 60.074 38.462 13.09 0.00 37.56 4.30
19 20 5.404366 CGTTCAAATCTTCAGAGTAAACGGA 59.596 40.000 13.09 0.00 37.56 4.69
20 21 5.404366 TCGTTCAAATCTTCAGAGTAAACGG 59.596 40.000 17.51 6.54 39.55 4.44
21 22 6.448053 TCGTTCAAATCTTCAGAGTAAACG 57.552 37.500 14.08 14.08 39.98 3.60
22 23 9.319223 GAAATCGTTCAAATCTTCAGAGTAAAC 57.681 33.333 0.00 0.00 33.61 2.01
23 24 8.504005 GGAAATCGTTCAAATCTTCAGAGTAAA 58.496 33.333 0.00 0.00 35.25 2.01
24 25 7.878127 AGGAAATCGTTCAAATCTTCAGAGTAA 59.122 33.333 0.00 0.00 35.25 2.24
25 26 7.386851 AGGAAATCGTTCAAATCTTCAGAGTA 58.613 34.615 0.00 0.00 35.25 2.59
26 27 6.234177 AGGAAATCGTTCAAATCTTCAGAGT 58.766 36.000 0.00 0.00 35.25 3.24
27 28 6.734104 AGGAAATCGTTCAAATCTTCAGAG 57.266 37.500 0.00 0.00 35.25 3.35
28 29 7.386851 ACTAGGAAATCGTTCAAATCTTCAGA 58.613 34.615 0.00 0.00 35.25 3.27
29 30 7.331934 TGACTAGGAAATCGTTCAAATCTTCAG 59.668 37.037 0.00 0.00 35.25 3.02
30 31 7.117812 GTGACTAGGAAATCGTTCAAATCTTCA 59.882 37.037 0.00 0.00 35.25 3.02
31 32 7.117812 TGTGACTAGGAAATCGTTCAAATCTTC 59.882 37.037 0.00 0.00 35.25 2.87
32 33 6.934645 TGTGACTAGGAAATCGTTCAAATCTT 59.065 34.615 0.00 0.00 35.25 2.40
33 34 6.464222 TGTGACTAGGAAATCGTTCAAATCT 58.536 36.000 0.00 0.00 35.25 2.40
34 35 6.721571 TGTGACTAGGAAATCGTTCAAATC 57.278 37.500 0.00 0.00 35.25 2.17
35 36 7.822334 TGTATGTGACTAGGAAATCGTTCAAAT 59.178 33.333 0.00 0.00 35.25 2.32
36 37 7.156000 TGTATGTGACTAGGAAATCGTTCAAA 58.844 34.615 0.00 0.00 35.25 2.69
37 38 6.693466 TGTATGTGACTAGGAAATCGTTCAA 58.307 36.000 0.00 0.00 35.25 2.69
38 39 6.275494 TGTATGTGACTAGGAAATCGTTCA 57.725 37.500 0.00 0.00 35.25 3.18
39 40 6.201044 CCATGTATGTGACTAGGAAATCGTTC 59.799 42.308 0.00 0.00 0.00 3.95
40 41 6.049149 CCATGTATGTGACTAGGAAATCGTT 58.951 40.000 0.00 0.00 0.00 3.85
41 42 5.362717 TCCATGTATGTGACTAGGAAATCGT 59.637 40.000 0.00 0.00 31.42 3.73
42 43 5.842907 TCCATGTATGTGACTAGGAAATCG 58.157 41.667 0.00 0.00 31.42 3.34
43 44 6.201044 CGTTCCATGTATGTGACTAGGAAATC 59.799 42.308 0.00 0.00 40.78 2.17
44 45 6.049149 CGTTCCATGTATGTGACTAGGAAAT 58.951 40.000 0.00 0.00 40.78 2.17
45 46 5.186215 TCGTTCCATGTATGTGACTAGGAAA 59.814 40.000 0.00 0.00 40.78 3.13
46 47 4.707934 TCGTTCCATGTATGTGACTAGGAA 59.292 41.667 0.00 0.00 38.52 3.36
47 48 4.274978 TCGTTCCATGTATGTGACTAGGA 58.725 43.478 0.00 0.00 32.16 2.94
48 49 4.338400 TCTCGTTCCATGTATGTGACTAGG 59.662 45.833 0.00 0.00 0.00 3.02
49 50 5.500645 TCTCGTTCCATGTATGTGACTAG 57.499 43.478 0.00 0.00 0.00 2.57
50 51 5.736207 GCATCTCGTTCCATGTATGTGACTA 60.736 44.000 0.00 0.00 0.00 2.59
51 52 4.686972 CATCTCGTTCCATGTATGTGACT 58.313 43.478 0.00 0.00 0.00 3.41
52 53 3.246226 GCATCTCGTTCCATGTATGTGAC 59.754 47.826 0.00 0.00 0.00 3.67
53 54 3.132824 AGCATCTCGTTCCATGTATGTGA 59.867 43.478 0.00 0.00 0.00 3.58
54 55 3.461061 AGCATCTCGTTCCATGTATGTG 58.539 45.455 0.00 0.00 0.00 3.21
55 56 3.827008 AGCATCTCGTTCCATGTATGT 57.173 42.857 0.00 0.00 0.00 2.29
56 57 4.813161 AGAAAGCATCTCGTTCCATGTATG 59.187 41.667 0.00 0.00 34.34 2.39
57 58 5.028549 AGAAAGCATCTCGTTCCATGTAT 57.971 39.130 0.00 0.00 34.34 2.29
58 59 4.433615 GAGAAAGCATCTCGTTCCATGTA 58.566 43.478 4.07 0.00 44.89 2.29
59 60 3.265791 GAGAAAGCATCTCGTTCCATGT 58.734 45.455 4.07 0.00 44.89 3.21
60 61 3.940657 GAGAAAGCATCTCGTTCCATG 57.059 47.619 4.07 0.00 44.89 3.66
69 70 4.070716 CAGTCACTTTGGAGAAAGCATCT 58.929 43.478 0.00 0.00 42.19 2.90
70 71 4.067896 TCAGTCACTTTGGAGAAAGCATC 58.932 43.478 0.00 0.00 42.19 3.91
71 72 4.090761 TCAGTCACTTTGGAGAAAGCAT 57.909 40.909 0.00 0.00 42.19 3.79
72 73 3.558931 TCAGTCACTTTGGAGAAAGCA 57.441 42.857 0.00 0.00 42.19 3.91
73 74 4.130118 TCTTCAGTCACTTTGGAGAAAGC 58.870 43.478 0.00 0.00 42.19 3.51
74 75 7.969536 TTATCTTCAGTCACTTTGGAGAAAG 57.030 36.000 0.00 0.00 43.79 2.62
75 76 8.746052 TTTTATCTTCAGTCACTTTGGAGAAA 57.254 30.769 0.00 0.00 34.00 2.52
76 77 8.924511 ATTTTATCTTCAGTCACTTTGGAGAA 57.075 30.769 0.00 0.00 34.00 2.87
97 98 9.918630 CAAGACCATGAAAGTCTCAATTATTTT 57.081 29.630 3.91 0.00 43.77 1.82
98 99 9.300681 TCAAGACCATGAAAGTCTCAATTATTT 57.699 29.630 3.91 0.00 43.77 1.40
99 100 8.868522 TCAAGACCATGAAAGTCTCAATTATT 57.131 30.769 3.91 0.00 43.77 1.40
100 101 8.324306 TCTCAAGACCATGAAAGTCTCAATTAT 58.676 33.333 3.91 0.00 43.77 1.28
101 102 7.679783 TCTCAAGACCATGAAAGTCTCAATTA 58.320 34.615 3.91 0.00 43.77 1.40
102 103 6.537355 TCTCAAGACCATGAAAGTCTCAATT 58.463 36.000 3.91 0.00 43.77 2.32
103 104 6.119240 TCTCAAGACCATGAAAGTCTCAAT 57.881 37.500 3.91 0.00 43.77 2.57
104 105 5.551305 TCTCAAGACCATGAAAGTCTCAA 57.449 39.130 3.91 0.00 43.77 3.02
105 106 5.512060 CCTTCTCAAGACCATGAAAGTCTCA 60.512 44.000 3.91 0.00 43.77 3.27
106 107 4.934602 CCTTCTCAAGACCATGAAAGTCTC 59.065 45.833 3.91 0.00 43.77 3.36
107 108 4.805609 GCCTTCTCAAGACCATGAAAGTCT 60.806 45.833 0.00 0.00 46.50 3.24
108 109 3.438434 GCCTTCTCAAGACCATGAAAGTC 59.562 47.826 0.00 0.00 34.31 3.01
109 110 3.416156 GCCTTCTCAAGACCATGAAAGT 58.584 45.455 0.00 0.00 0.00 2.66
110 111 2.417933 CGCCTTCTCAAGACCATGAAAG 59.582 50.000 0.00 0.00 0.00 2.62
111 112 2.426522 CGCCTTCTCAAGACCATGAAA 58.573 47.619 0.00 0.00 0.00 2.69
112 113 1.339055 CCGCCTTCTCAAGACCATGAA 60.339 52.381 0.00 0.00 0.00 2.57
113 114 0.250234 CCGCCTTCTCAAGACCATGA 59.750 55.000 0.00 0.00 0.00 3.07
114 115 0.036010 ACCGCCTTCTCAAGACCATG 60.036 55.000 0.00 0.00 0.00 3.66
115 116 1.568504 TACCGCCTTCTCAAGACCAT 58.431 50.000 0.00 0.00 0.00 3.55
116 117 1.568504 ATACCGCCTTCTCAAGACCA 58.431 50.000 0.00 0.00 0.00 4.02
117 118 2.223994 GGTATACCGCCTTCTCAAGACC 60.224 54.545 6.06 0.00 0.00 3.85
118 119 3.095102 GGTATACCGCCTTCTCAAGAC 57.905 52.381 6.06 0.00 0.00 3.01
131 132 5.422145 ACACACCTTATTTGTCGGTATACC 58.578 41.667 12.27 12.27 0.00 2.73
132 133 6.101332 TGACACACCTTATTTGTCGGTATAC 58.899 40.000 0.00 0.00 42.20 1.47
133 134 6.283544 TGACACACCTTATTTGTCGGTATA 57.716 37.500 0.00 0.00 42.20 1.47
134 135 5.155278 TGACACACCTTATTTGTCGGTAT 57.845 39.130 0.00 0.00 42.20 2.73
135 136 4.603989 TGACACACCTTATTTGTCGGTA 57.396 40.909 0.00 0.00 42.20 4.02
136 137 3.478857 TGACACACCTTATTTGTCGGT 57.521 42.857 0.00 0.00 42.20 4.69
137 138 6.677781 AATATGACACACCTTATTTGTCGG 57.322 37.500 0.00 0.00 42.20 4.79
138 139 9.485591 GTAAAATATGACACACCTTATTTGTCG 57.514 33.333 0.00 0.00 42.20 4.35
139 140 9.485591 CGTAAAATATGACACACCTTATTTGTC 57.514 33.333 0.00 0.00 40.14 3.18
140 141 7.966204 GCGTAAAATATGACACACCTTATTTGT 59.034 33.333 0.00 0.00 31.19 2.83
141 142 7.965655 TGCGTAAAATATGACACACCTTATTTG 59.034 33.333 0.00 0.00 31.19 2.32
142 143 8.046294 TGCGTAAAATATGACACACCTTATTT 57.954 30.769 0.00 0.00 31.70 1.40
143 144 7.618502 TGCGTAAAATATGACACACCTTATT 57.381 32.000 0.00 0.00 0.00 1.40
144 145 7.618502 TTGCGTAAAATATGACACACCTTAT 57.381 32.000 0.00 0.00 0.00 1.73
145 146 7.436430 TTTGCGTAAAATATGACACACCTTA 57.564 32.000 0.00 0.00 0.00 2.69
146 147 5.950758 TTGCGTAAAATATGACACACCTT 57.049 34.783 0.00 0.00 0.00 3.50
147 148 5.950758 TTTGCGTAAAATATGACACACCT 57.049 34.783 0.00 0.00 0.00 4.00
148 149 6.090129 ACATTTGCGTAAAATATGACACACC 58.910 36.000 1.94 0.00 36.28 4.16
149 150 8.662369 TTACATTTGCGTAAAATATGACACAC 57.338 30.769 1.94 0.00 36.28 3.82
150 151 9.678941 TTTTACATTTGCGTAAAATATGACACA 57.321 25.926 1.94 0.00 43.14 3.72
159 160 8.462143 TGTTCAAGTTTTACATTTGCGTAAAA 57.538 26.923 1.94 5.19 44.82 1.52
160 161 8.535592 CATGTTCAAGTTTTACATTTGCGTAAA 58.464 29.630 0.00 0.00 39.08 2.01
161 162 7.915923 TCATGTTCAAGTTTTACATTTGCGTAA 59.084 29.630 0.00 0.00 30.45 3.18
162 163 7.418408 TCATGTTCAAGTTTTACATTTGCGTA 58.582 30.769 0.00 0.00 30.45 4.42
163 164 6.269315 TCATGTTCAAGTTTTACATTTGCGT 58.731 32.000 0.00 0.00 30.45 5.24
164 165 6.746104 TCATGTTCAAGTTTTACATTTGCG 57.254 33.333 0.00 0.00 30.45 4.85
165 166 9.934190 AAATTCATGTTCAAGTTTTACATTTGC 57.066 25.926 0.00 0.00 30.45 3.68
179 180 9.433153 TGCAAAGCATATTAAAATTCATGTTCA 57.567 25.926 0.00 0.00 31.71 3.18
182 183 9.656040 TCTTGCAAAGCATATTAAAATTCATGT 57.344 25.926 0.00 0.00 45.70 3.21
183 184 9.910511 GTCTTGCAAAGCATATTAAAATTCATG 57.089 29.630 0.00 0.00 45.70 3.07
184 185 9.101655 GGTCTTGCAAAGCATATTAAAATTCAT 57.898 29.630 0.00 0.00 45.70 2.57
185 186 8.313292 AGGTCTTGCAAAGCATATTAAAATTCA 58.687 29.630 0.00 0.00 45.70 2.57
186 187 8.707938 AGGTCTTGCAAAGCATATTAAAATTC 57.292 30.769 0.00 0.00 45.70 2.17
190 191 9.585099 CAATAAGGTCTTGCAAAGCATATTAAA 57.415 29.630 0.00 0.00 45.70 1.52
191 192 8.965819 TCAATAAGGTCTTGCAAAGCATATTAA 58.034 29.630 0.00 0.00 45.70 1.40
192 193 8.518430 TCAATAAGGTCTTGCAAAGCATATTA 57.482 30.769 0.00 0.00 45.70 0.98
193 194 7.408756 TCAATAAGGTCTTGCAAAGCATATT 57.591 32.000 0.00 7.77 45.70 1.28
194 195 7.592885 ATCAATAAGGTCTTGCAAAGCATAT 57.407 32.000 0.00 2.25 45.70 1.78
195 196 8.696043 ATATCAATAAGGTCTTGCAAAGCATA 57.304 30.769 0.00 0.00 45.70 3.14
196 197 5.927281 ATCAATAAGGTCTTGCAAAGCAT 57.073 34.783 0.00 0.00 45.70 3.79
197 198 6.602803 TGATATCAATAAGGTCTTGCAAAGCA 59.397 34.615 1.98 0.00 45.70 3.91
198 199 7.031226 TGATATCAATAAGGTCTTGCAAAGC 57.969 36.000 1.98 1.70 45.70 3.51
200 201 8.750515 TCATGATATCAATAAGGTCTTGCAAA 57.249 30.769 9.99 0.00 0.00 3.68
201 202 8.929260 ATCATGATATCAATAAGGTCTTGCAA 57.071 30.769 9.99 0.00 0.00 4.08
206 207 9.610705 GCACATATCATGATATCAATAAGGTCT 57.389 33.333 22.76 0.00 31.98 3.85
207 208 9.610705 AGCACATATCATGATATCAATAAGGTC 57.389 33.333 22.76 11.11 31.98 3.85
208 209 9.970553 AAGCACATATCATGATATCAATAAGGT 57.029 29.630 22.76 14.01 31.98 3.50
212 213 9.962809 TCCAAAGCACATATCATGATATCAATA 57.037 29.630 22.76 4.57 31.98 1.90
213 214 8.873186 TCCAAAGCACATATCATGATATCAAT 57.127 30.769 22.76 10.61 31.98 2.57
214 215 8.873186 ATCCAAAGCACATATCATGATATCAA 57.127 30.769 22.76 1.73 31.98 2.57
225 226 9.970395 CACACAAAATATATCCAAAGCACATAT 57.030 29.630 0.00 0.00 0.00 1.78
226 227 7.920151 GCACACAAAATATATCCAAAGCACATA 59.080 33.333 0.00 0.00 0.00 2.29
227 228 6.757947 GCACACAAAATATATCCAAAGCACAT 59.242 34.615 0.00 0.00 0.00 3.21
228 229 6.098679 GCACACAAAATATATCCAAAGCACA 58.901 36.000 0.00 0.00 0.00 4.57
229 230 6.098679 TGCACACAAAATATATCCAAAGCAC 58.901 36.000 0.00 0.00 0.00 4.40
230 231 6.278172 TGCACACAAAATATATCCAAAGCA 57.722 33.333 0.00 0.00 0.00 3.91
231 232 8.918658 CATATGCACACAAAATATATCCAAAGC 58.081 33.333 0.00 0.00 0.00 3.51
232 233 9.970395 ACATATGCACACAAAATATATCCAAAG 57.030 29.630 1.58 0.00 0.00 2.77
234 235 9.747293 CAACATATGCACACAAAATATATCCAA 57.253 29.630 1.58 0.00 0.00 3.53
235 236 8.358895 CCAACATATGCACACAAAATATATCCA 58.641 33.333 1.58 0.00 0.00 3.41
236 237 8.359642 ACCAACATATGCACACAAAATATATCC 58.640 33.333 1.58 0.00 0.00 2.59
237 238 9.748708 AACCAACATATGCACACAAAATATATC 57.251 29.630 1.58 0.00 0.00 1.63
238 239 9.748708 GAACCAACATATGCACACAAAATATAT 57.251 29.630 1.58 0.00 0.00 0.86
239 240 7.912773 CGAACCAACATATGCACACAAAATATA 59.087 33.333 1.58 0.00 0.00 0.86
240 241 6.751425 CGAACCAACATATGCACACAAAATAT 59.249 34.615 1.58 0.00 0.00 1.28
241 242 6.089476 CGAACCAACATATGCACACAAAATA 58.911 36.000 1.58 0.00 0.00 1.40
242 243 4.922692 CGAACCAACATATGCACACAAAAT 59.077 37.500 1.58 0.00 0.00 1.82
243 244 4.202060 ACGAACCAACATATGCACACAAAA 60.202 37.500 1.58 0.00 0.00 2.44
244 245 3.316588 ACGAACCAACATATGCACACAAA 59.683 39.130 1.58 0.00 0.00 2.83
245 246 2.881513 ACGAACCAACATATGCACACAA 59.118 40.909 1.58 0.00 0.00 3.33
246 247 2.499197 ACGAACCAACATATGCACACA 58.501 42.857 1.58 0.00 0.00 3.72
247 248 3.552604 AACGAACCAACATATGCACAC 57.447 42.857 1.58 0.00 0.00 3.82
248 249 5.690997 TTTAACGAACCAACATATGCACA 57.309 34.783 1.58 0.00 0.00 4.57
249 250 7.115663 ACAAATTTAACGAACCAACATATGCAC 59.884 33.333 1.58 0.00 0.00 4.57
250 251 7.115520 CACAAATTTAACGAACCAACATATGCA 59.884 33.333 1.58 0.00 0.00 3.96
251 252 7.411372 CCACAAATTTAACGAACCAACATATGC 60.411 37.037 1.58 0.00 0.00 3.14
252 253 7.596995 ACCACAAATTTAACGAACCAACATATG 59.403 33.333 0.00 0.00 0.00 1.78
253 254 7.596995 CACCACAAATTTAACGAACCAACATAT 59.403 33.333 0.00 0.00 0.00 1.78
254 255 6.918569 CACCACAAATTTAACGAACCAACATA 59.081 34.615 0.00 0.00 0.00 2.29
255 256 5.751028 CACCACAAATTTAACGAACCAACAT 59.249 36.000 0.00 0.00 0.00 2.71
256 257 5.103000 CACCACAAATTTAACGAACCAACA 58.897 37.500 0.00 0.00 0.00 3.33
257 258 5.103687 ACACCACAAATTTAACGAACCAAC 58.896 37.500 0.00 0.00 0.00 3.77
258 259 5.326200 ACACCACAAATTTAACGAACCAA 57.674 34.783 0.00 0.00 0.00 3.67
259 260 4.985538 ACACCACAAATTTAACGAACCA 57.014 36.364 0.00 0.00 0.00 3.67
260 261 7.933728 ATTTACACCACAAATTTAACGAACC 57.066 32.000 0.00 0.00 0.00 3.62
270 271 9.943163 GCACAAAATAAAATTTACACCACAAAT 57.057 25.926 0.00 0.00 0.00 2.32
271 272 8.398665 GGCACAAAATAAAATTTACACCACAAA 58.601 29.630 0.00 0.00 0.00 2.83
272 273 7.552687 TGGCACAAAATAAAATTTACACCACAA 59.447 29.630 0.00 0.00 31.92 3.33
273 274 7.047891 TGGCACAAAATAAAATTTACACCACA 58.952 30.769 0.00 0.00 31.92 4.17
274 275 7.484035 TGGCACAAAATAAAATTTACACCAC 57.516 32.000 0.00 0.00 31.92 4.16
285 286 8.868825 GGGTGGTCCAATTGGCACAAAATAAA 62.869 42.308 26.67 4.69 38.65 1.40
286 287 7.490582 GGGTGGTCCAATTGGCACAAAATAA 62.491 44.000 26.67 5.34 38.65 1.40
287 288 6.080893 GGGTGGTCCAATTGGCACAAAATA 62.081 45.833 26.67 5.97 38.65 1.40
288 289 5.390619 GGGTGGTCCAATTGGCACAAAAT 62.391 47.826 26.67 0.00 38.65 1.82
289 290 4.131040 GGGTGGTCCAATTGGCACAAAA 62.131 50.000 26.67 7.27 38.65 2.44
290 291 2.648611 GGGTGGTCCAATTGGCACAAA 61.649 52.381 26.67 13.81 38.65 2.83
291 292 1.118356 GGGTGGTCCAATTGGCACAA 61.118 55.000 26.67 15.39 38.65 3.33
292 293 1.532794 GGGTGGTCCAATTGGCACA 60.533 57.895 26.67 21.16 32.13 4.57
293 294 1.228862 AGGGTGGTCCAATTGGCAC 60.229 57.895 20.33 20.68 38.24 5.01
294 295 1.228831 CAGGGTGGTCCAATTGGCA 60.229 57.895 20.33 10.14 38.24 4.92
295 296 1.076549 TCAGGGTGGTCCAATTGGC 59.923 57.895 20.33 14.24 38.24 4.52
296 297 0.112218 TGTCAGGGTGGTCCAATTGG 59.888 55.000 19.08 19.08 38.24 3.16
297 298 2.220653 ATGTCAGGGTGGTCCAATTG 57.779 50.000 0.00 0.00 38.24 2.32
298 299 4.396357 TTTATGTCAGGGTGGTCCAATT 57.604 40.909 0.00 0.00 38.24 2.32
299 300 4.396357 TTTTATGTCAGGGTGGTCCAAT 57.604 40.909 0.00 0.00 38.24 3.16
300 301 3.885976 TTTTATGTCAGGGTGGTCCAA 57.114 42.857 0.00 0.00 38.24 3.53
301 302 3.308832 GGATTTTATGTCAGGGTGGTCCA 60.309 47.826 0.00 0.00 38.24 4.02
302 303 3.053619 AGGATTTTATGTCAGGGTGGTCC 60.054 47.826 0.00 0.00 0.00 4.46
303 304 3.947834 CAGGATTTTATGTCAGGGTGGTC 59.052 47.826 0.00 0.00 0.00 4.02
304 305 3.309121 CCAGGATTTTATGTCAGGGTGGT 60.309 47.826 0.00 0.00 0.00 4.16
305 306 3.290710 CCAGGATTTTATGTCAGGGTGG 58.709 50.000 0.00 0.00 0.00 4.61
306 307 2.689983 GCCAGGATTTTATGTCAGGGTG 59.310 50.000 0.00 0.00 0.00 4.61
307 308 2.582636 AGCCAGGATTTTATGTCAGGGT 59.417 45.455 0.00 0.00 0.00 4.34
308 309 3.303351 AGCCAGGATTTTATGTCAGGG 57.697 47.619 0.00 0.00 0.00 4.45
309 310 3.809832 CGTAGCCAGGATTTTATGTCAGG 59.190 47.826 0.00 0.00 0.00 3.86
328 329 6.547202 AGGAACTTACAAAGCAGTGGCGTA 62.547 45.833 0.00 0.00 40.65 4.42
329 330 5.873665 AGGAACTTACAAAGCAGTGGCGT 62.874 47.826 0.00 0.00 40.65 5.68
330 331 3.386062 AGGAACTTACAAAGCAGTGGCG 61.386 50.000 0.00 0.00 40.65 5.69
331 332 2.230660 AGGAACTTACAAAGCAGTGGC 58.769 47.619 0.00 0.00 35.55 5.01
348 349 8.966868 GGTCATTTTATTGGTTATTCTCAAGGA 58.033 33.333 0.00 0.00 0.00 3.36
349 350 7.915397 CGGTCATTTTATTGGTTATTCTCAAGG 59.085 37.037 0.00 0.00 0.00 3.61
350 351 7.432252 GCGGTCATTTTATTGGTTATTCTCAAG 59.568 37.037 0.00 0.00 0.00 3.02
351 352 7.094162 TGCGGTCATTTTATTGGTTATTCTCAA 60.094 33.333 0.00 0.00 0.00 3.02
352 353 6.375736 TGCGGTCATTTTATTGGTTATTCTCA 59.624 34.615 0.00 0.00 0.00 3.27
353 354 6.791303 TGCGGTCATTTTATTGGTTATTCTC 58.209 36.000 0.00 0.00 0.00 2.87
354 355 6.767524 TGCGGTCATTTTATTGGTTATTCT 57.232 33.333 0.00 0.00 0.00 2.40
355 356 6.074356 GCATGCGGTCATTTTATTGGTTATTC 60.074 38.462 0.00 0.00 0.00 1.75
356 357 5.752955 GCATGCGGTCATTTTATTGGTTATT 59.247 36.000 0.00 0.00 0.00 1.40
357 358 5.163468 TGCATGCGGTCATTTTATTGGTTAT 60.163 36.000 14.09 0.00 0.00 1.89
358 359 4.158579 TGCATGCGGTCATTTTATTGGTTA 59.841 37.500 14.09 0.00 0.00 2.85
359 360 3.056250 TGCATGCGGTCATTTTATTGGTT 60.056 39.130 14.09 0.00 0.00 3.67
360 361 2.495270 TGCATGCGGTCATTTTATTGGT 59.505 40.909 14.09 0.00 0.00 3.67
361 362 3.162202 TGCATGCGGTCATTTTATTGG 57.838 42.857 14.09 0.00 0.00 3.16
362 363 4.613944 AGATGCATGCGGTCATTTTATTG 58.386 39.130 20.70 0.00 0.00 1.90
363 364 4.261741 GGAGATGCATGCGGTCATTTTATT 60.262 41.667 20.70 2.87 0.00 1.40
364 365 3.254166 GGAGATGCATGCGGTCATTTTAT 59.746 43.478 20.70 3.70 0.00 1.40
365 366 2.618241 GGAGATGCATGCGGTCATTTTA 59.382 45.455 20.70 0.00 0.00 1.52
366 367 1.406539 GGAGATGCATGCGGTCATTTT 59.593 47.619 20.70 4.40 0.00 1.82
367 368 1.027357 GGAGATGCATGCGGTCATTT 58.973 50.000 20.70 2.56 0.00 2.32
368 369 0.820891 GGGAGATGCATGCGGTCATT 60.821 55.000 20.70 5.31 0.00 2.57
369 370 1.228063 GGGAGATGCATGCGGTCAT 60.228 57.895 20.70 6.79 0.00 3.06
370 371 2.190313 GGGAGATGCATGCGGTCA 59.810 61.111 20.70 1.95 0.00 4.02
371 372 1.890979 CTGGGAGATGCATGCGGTC 60.891 63.158 14.09 13.66 0.00 4.79
372 373 1.703014 ATCTGGGAGATGCATGCGGT 61.703 55.000 14.09 3.84 32.80 5.68
373 374 1.072678 ATCTGGGAGATGCATGCGG 59.927 57.895 14.09 0.00 32.80 5.69
374 375 2.244946 CATCTGGGAGATGCATGCG 58.755 57.895 14.09 0.00 44.69 4.73
381 382 1.422531 GTCCTCTGCATCTGGGAGAT 58.577 55.000 1.66 0.00 43.58 2.75
382 383 1.039785 CGTCCTCTGCATCTGGGAGA 61.040 60.000 1.66 0.00 42.24 3.71
383 384 1.440893 CGTCCTCTGCATCTGGGAG 59.559 63.158 0.00 0.00 36.05 4.30
384 385 2.060383 CCGTCCTCTGCATCTGGGA 61.060 63.158 0.00 0.00 0.00 4.37
385 386 2.503061 CCGTCCTCTGCATCTGGG 59.497 66.667 0.00 0.00 0.00 4.45
386 387 2.503061 CCCGTCCTCTGCATCTGG 59.497 66.667 0.00 0.00 0.00 3.86
387 388 2.303549 GACCCCGTCCTCTGCATCTG 62.304 65.000 0.00 0.00 0.00 2.90
388 389 2.039624 ACCCCGTCCTCTGCATCT 59.960 61.111 0.00 0.00 0.00 2.90
389 390 1.690219 ATGACCCCGTCCTCTGCATC 61.690 60.000 0.00 0.00 0.00 3.91
390 391 1.690219 GATGACCCCGTCCTCTGCAT 61.690 60.000 0.00 0.00 0.00 3.96
391 392 2.284625 ATGACCCCGTCCTCTGCA 60.285 61.111 0.00 0.00 0.00 4.41
392 393 2.501610 GATGACCCCGTCCTCTGC 59.498 66.667 0.00 0.00 0.00 4.26
393 394 3.221222 GGATGACCCCGTCCTCTG 58.779 66.667 0.00 0.00 43.62 3.35
397 398 1.272554 AAAGGAGGATGACCCCGTCC 61.273 60.000 0.00 0.00 46.61 4.79
398 399 0.618981 AAAAGGAGGATGACCCCGTC 59.381 55.000 0.00 0.00 36.73 4.79
399 400 1.073098 AAAAAGGAGGATGACCCCGT 58.927 50.000 0.00 0.00 36.73 5.28
400 401 3.978876 AAAAAGGAGGATGACCCCG 57.021 52.632 0.00 0.00 36.73 5.73
424 425 4.795962 GCCTTGTGTGATTCGATGGTTTTT 60.796 41.667 0.00 0.00 0.00 1.94
425 426 3.305335 GCCTTGTGTGATTCGATGGTTTT 60.305 43.478 0.00 0.00 0.00 2.43
426 427 2.228822 GCCTTGTGTGATTCGATGGTTT 59.771 45.455 0.00 0.00 0.00 3.27
465 474 0.687757 AGGTCCTGGAATCGCTGCTA 60.688 55.000 0.00 0.00 0.00 3.49
478 487 2.989824 CGACACGGTCCAGGTCCT 60.990 66.667 0.82 0.00 0.00 3.85
484 493 3.986006 GGCTCACGACACGGTCCA 61.986 66.667 0.00 0.00 0.00 4.02
525 534 1.607148 GGTGTGTTTTGGCTAGTCACC 59.393 52.381 0.00 0.00 37.33 4.02
527 536 1.139256 TCGGTGTGTTTTGGCTAGTCA 59.861 47.619 0.00 0.00 0.00 3.41
609 619 1.787281 CGCTACGTCCATCGATCGATC 60.787 57.143 27.20 15.68 42.86 3.69
699 713 2.257409 GACATGGTGTCGGGGCTCAT 62.257 60.000 0.00 0.00 37.67 2.90
730 745 0.688087 ATCCGGAGAGGGTGAACTCC 60.688 60.000 11.34 0.00 46.31 3.85
733 748 1.035932 TCGATCCGGAGAGGGTGAAC 61.036 60.000 11.34 0.00 41.52 3.18
736 751 2.491022 GGTCGATCCGGAGAGGGTG 61.491 68.421 11.34 0.00 41.52 4.61
737 752 2.123812 GGTCGATCCGGAGAGGGT 60.124 66.667 11.34 0.00 41.52 4.34
761 776 4.175489 CGGTCGACGCTCGGTGAT 62.175 66.667 9.92 0.00 40.88 3.06
771 789 2.694829 ATTAGATGGCCGCGGTCGAC 62.695 60.000 26.87 20.91 38.10 4.20
776 794 1.478510 AGAGATATTAGATGGCCGCGG 59.521 52.381 24.05 24.05 0.00 6.46
887 905 0.241749 CGTACTCCGGCAACACAGTA 59.758 55.000 0.00 0.00 30.92 2.74
912 930 3.007473 AGACTTCGAGGTAGCTAAGCT 57.993 47.619 0.00 0.00 43.41 3.74
914 932 4.966965 TGAAGACTTCGAGGTAGCTAAG 57.033 45.455 10.56 0.00 0.00 2.18
915 933 4.765856 AGTTGAAGACTTCGAGGTAGCTAA 59.234 41.667 10.56 0.00 33.92 3.09
922 940 3.371102 TCACAGTTGAAGACTTCGAGG 57.629 47.619 10.56 6.60 36.10 4.63
925 943 4.550422 TCTGATCACAGTTGAAGACTTCG 58.450 43.478 10.56 0.00 43.81 3.79
928 946 5.735285 TGATCTGATCACAGTTGAAGACT 57.265 39.130 16.06 0.00 43.81 3.24
940 958 2.031870 CCCCTGTACGTGATCTGATCA 58.968 52.381 16.06 16.06 36.84 2.92
941 959 2.307768 TCCCCTGTACGTGATCTGATC 58.692 52.381 10.72 10.72 0.00 2.92
942 960 2.454336 TCCCCTGTACGTGATCTGAT 57.546 50.000 0.00 0.00 0.00 2.90
943 961 2.225382 TTCCCCTGTACGTGATCTGA 57.775 50.000 0.00 0.00 0.00 3.27
944 962 2.618053 GTTTCCCCTGTACGTGATCTG 58.382 52.381 0.00 0.00 0.00 2.90
945 963 1.553704 GGTTTCCCCTGTACGTGATCT 59.446 52.381 0.00 0.00 0.00 2.75
946 964 1.738030 CGGTTTCCCCTGTACGTGATC 60.738 57.143 0.00 0.00 0.00 2.92
947 965 0.248289 CGGTTTCCCCTGTACGTGAT 59.752 55.000 0.00 0.00 0.00 3.06
948 966 1.667151 CGGTTTCCCCTGTACGTGA 59.333 57.895 0.00 0.00 0.00 4.35
949 967 2.030958 GCGGTTTCCCCTGTACGTG 61.031 63.158 0.00 0.00 0.00 4.49
950 968 2.212110 AGCGGTTTCCCCTGTACGT 61.212 57.895 0.00 0.00 0.00 3.57
951 969 1.740296 CAGCGGTTTCCCCTGTACG 60.740 63.158 0.00 0.00 0.00 3.67
952 970 0.672711 GACAGCGGTTTCCCCTGTAC 60.673 60.000 6.15 0.00 40.32 2.90
953 971 1.675219 GACAGCGGTTTCCCCTGTA 59.325 57.895 6.15 0.00 40.32 2.74
954 972 2.430367 GACAGCGGTTTCCCCTGT 59.570 61.111 5.89 5.89 41.86 4.00
955 973 2.359975 GGACAGCGGTTTCCCCTG 60.360 66.667 8.65 0.00 35.99 4.45
956 974 2.529389 AGGACAGCGGTTTCCCCT 60.529 61.111 15.91 2.35 31.51 4.79
957 975 2.359975 CAGGACAGCGGTTTCCCC 60.360 66.667 15.91 0.00 31.51 4.81
958 976 1.671379 GACAGGACAGCGGTTTCCC 60.671 63.158 15.91 2.49 31.51 3.97
959 977 1.671379 GGACAGGACAGCGGTTTCC 60.671 63.158 11.87 11.87 0.00 3.13
960 978 2.027625 CGGACAGGACAGCGGTTTC 61.028 63.158 0.00 0.00 0.00 2.78
961 979 2.030562 CGGACAGGACAGCGGTTT 59.969 61.111 0.00 0.00 0.00 3.27
962 980 2.915659 TCGGACAGGACAGCGGTT 60.916 61.111 0.00 0.00 0.00 4.44
963 981 3.374402 CTCGGACAGGACAGCGGT 61.374 66.667 0.00 0.00 0.00 5.68
978 996 3.151022 CCGGTGGCTCCTCTCCTC 61.151 72.222 3.83 0.00 0.00 3.71
1095 1113 0.603975 GAAGGAAGAGTGGCAGCGTT 60.604 55.000 0.00 0.00 0.00 4.84
1096 1114 1.004440 GAAGGAAGAGTGGCAGCGT 60.004 57.895 0.00 0.00 0.00 5.07
1097 1115 2.097038 CGAAGGAAGAGTGGCAGCG 61.097 63.158 0.00 0.00 0.00 5.18
1108 1126 1.513373 CGTCATCGTCGCGAAGGAA 60.513 57.895 21.64 3.94 39.99 3.36
1113 1131 4.509883 CCGTCGTCATCGTCGCGA 62.510 66.667 3.71 3.71 44.20 5.87
1122 1140 4.918278 TGGTCACCCCCGTCGTCA 62.918 66.667 0.00 0.00 0.00 4.35
1150 1168 3.876589 TTTCCCAGTGGCGAGCGTC 62.877 63.158 2.61 0.00 0.00 5.19
1151 1169 3.254024 ATTTCCCAGTGGCGAGCGT 62.254 57.895 2.61 0.00 0.00 5.07
1153 1171 2.409870 CCATTTCCCAGTGGCGAGC 61.410 63.158 2.61 0.00 0.00 5.03
1154 1172 1.750399 CCCATTTCCCAGTGGCGAG 60.750 63.158 2.61 0.00 34.08 5.03
1155 1173 2.354729 CCCATTTCCCAGTGGCGA 59.645 61.111 2.61 0.00 34.08 5.54
1156 1174 3.451894 GCCCATTTCCCAGTGGCG 61.452 66.667 2.61 0.00 34.08 5.69
1157 1175 1.912763 TTGCCCATTTCCCAGTGGC 60.913 57.895 2.61 0.00 42.49 5.01
1158 1176 0.831288 TGTTGCCCATTTCCCAGTGG 60.831 55.000 0.63 0.63 35.22 4.00
1159 1177 1.001181 CTTGTTGCCCATTTCCCAGTG 59.999 52.381 0.00 0.00 0.00 3.66
1171 1195 3.632189 GATGAAACACTCACTTGTTGCC 58.368 45.455 0.00 0.00 39.70 4.52
1185 1209 1.600023 TGGAACACCACCGATGAAAC 58.400 50.000 0.00 0.00 0.00 2.78
1201 1225 1.351017 ACGAAAGAGAAAGGGCATGGA 59.649 47.619 0.00 0.00 0.00 3.41
1203 1227 2.426522 TCACGAAAGAGAAAGGGCATG 58.573 47.619 0.00 0.00 0.00 4.06
1204 1228 2.859165 TCACGAAAGAGAAAGGGCAT 57.141 45.000 0.00 0.00 0.00 4.40
1205 1229 2.631160 TTCACGAAAGAGAAAGGGCA 57.369 45.000 0.00 0.00 37.75 5.36
1210 1234 3.554324 CGGTCAGTTTCACGAAAGAGAAA 59.446 43.478 0.00 0.00 45.95 2.52
1245 1269 2.239654 CCTCTTCCTCCTGCACCAATTA 59.760 50.000 0.00 0.00 0.00 1.40
1248 1272 2.069776 CCTCTTCCTCCTGCACCAA 58.930 57.895 0.00 0.00 0.00 3.67
1250 1274 2.270527 GCCTCTTCCTCCTGCACC 59.729 66.667 0.00 0.00 0.00 5.01
1441 1468 4.762220 TCCCATACATCTGGATCACCATA 58.238 43.478 0.00 0.00 45.87 2.74
1450 1477 0.689623 GGCTCCTCCCATACATCTGG 59.310 60.000 0.00 0.00 35.95 3.86
1526 1553 3.041946 ACTAACATCCAGTCTCCATCCC 58.958 50.000 0.00 0.00 0.00 3.85
1533 1560 3.193691 CGTCTCCAACTAACATCCAGTCT 59.806 47.826 0.00 0.00 0.00 3.24
1543 1570 2.126228 CGGCGCGTCTCCAACTAA 60.126 61.111 9.90 0.00 0.00 2.24
1585 1630 3.006217 CAGGATTCGATGCATAGACAGGA 59.994 47.826 9.21 0.00 0.00 3.86
1611 1656 1.516453 CGCCAACGATTTTGTGTTGTG 59.484 47.619 0.00 0.00 42.99 3.33
1612 1657 1.133407 ACGCCAACGATTTTGTGTTGT 59.867 42.857 0.00 0.00 42.99 3.32
1637 1682 5.901884 CGATCCGTTTGATAATGTTGTTAGC 59.098 40.000 0.00 0.00 32.41 3.09
1652 1697 2.544685 CTGCAAGAGATCGATCCGTTT 58.455 47.619 21.66 10.78 34.07 3.60
1693 1738 2.613133 ACGAGTAGTATCTTGAGCCGTC 59.387 50.000 0.00 0.00 0.00 4.79
1721 1766 4.021102 AGCAATGGCAAGTACTGTAGTT 57.979 40.909 0.00 2.06 44.61 2.24
1753 1798 3.619733 GCCAGTACAGATCCATGACAACA 60.620 47.826 0.00 0.00 0.00 3.33
1755 1800 2.092968 GGCCAGTACAGATCCATGACAA 60.093 50.000 0.00 0.00 0.00 3.18
1769 1814 4.673298 CACACACGCCGGCCAGTA 62.673 66.667 23.46 0.00 0.00 2.74
1791 1836 9.855021 AAAATTATTCAGTGCGCTAAAACTAAT 57.145 25.926 9.73 7.13 0.00 1.73
1803 1848 7.951565 GCAACATGTACAAAAATTATTCAGTGC 59.048 33.333 0.00 0.00 0.00 4.40
1877 2242 7.027161 ACTTGTTATGTTGCCGATTAAACATC 58.973 34.615 4.42 0.00 43.97 3.06
1895 2264 4.139859 TCGGTGAAGACCAAACTTGTTA 57.860 40.909 0.00 0.00 43.33 2.41
1926 2295 8.786898 TCGATGGATCCAATTCTGAAATAATTC 58.213 33.333 20.67 5.33 36.04 2.17
1961 2330 9.780186 AAATTCGGTCAAAACCCATTAAAATTA 57.220 25.926 0.00 0.00 43.21 1.40
1990 2359 9.123709 GTCATATTCGCTAATTTCAAACAAACA 57.876 29.630 0.00 0.00 0.00 2.83
1991 2360 8.583765 GGTCATATTCGCTAATTTCAAACAAAC 58.416 33.333 0.00 0.00 0.00 2.93
2007 2376 6.119144 ACTCAAAATTTCGGGTCATATTCG 57.881 37.500 0.00 0.00 0.00 3.34
2065 2434 7.848223 AGAAAACCAACAATTTCTCCAAAAG 57.152 32.000 0.00 0.00 40.87 2.27
2067 2436 8.536175 AGTTAGAAAACCAACAATTTCTCCAAA 58.464 29.630 4.21 0.00 43.05 3.28
2076 2445 8.576442 CAGGAACATAGTTAGAAAACCAACAAT 58.424 33.333 0.00 0.00 36.15 2.71
2093 2463 8.684520 GCTAGTAACTCTAAAGACAGGAACATA 58.315 37.037 0.00 0.00 0.00 2.29
2097 2467 7.534723 TTGCTAGTAACTCTAAAGACAGGAA 57.465 36.000 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.