Multiple sequence alignment - TraesCS7B01G026800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G026800 | chr7B | 100.000 | 7560 | 0 | 0 | 1 | 7560 | 25669401 | 25661842 | 0.000000e+00 | 13961.0 |
1 | TraesCS7B01G026800 | chr7B | 96.103 | 2361 | 64 | 5 | 2433 | 4766 | 707580135 | 707577776 | 0.000000e+00 | 3825.0 |
2 | TraesCS7B01G026800 | chr7B | 96.464 | 1103 | 39 | 0 | 4830 | 5932 | 25887101 | 25888203 | 0.000000e+00 | 1821.0 |
3 | TraesCS7B01G026800 | chr7B | 96.253 | 854 | 29 | 3 | 1236 | 2089 | 664046780 | 664047630 | 0.000000e+00 | 1397.0 |
4 | TraesCS7B01G026800 | chr7B | 96.336 | 846 | 30 | 1 | 1236 | 2081 | 4216179 | 4217023 | 0.000000e+00 | 1389.0 |
5 | TraesCS7B01G026800 | chr7B | 94.504 | 655 | 35 | 1 | 5926 | 6580 | 25888233 | 25888886 | 0.000000e+00 | 1009.0 |
6 | TraesCS7B01G026800 | chr7B | 85.572 | 901 | 90 | 13 | 2452 | 3316 | 144515127 | 144514231 | 0.000000e+00 | 907.0 |
7 | TraesCS7B01G026800 | chr7B | 96.532 | 519 | 14 | 4 | 7046 | 7560 | 470294600 | 470294082 | 0.000000e+00 | 856.0 |
8 | TraesCS7B01G026800 | chr7B | 88.315 | 736 | 54 | 11 | 311 | 1035 | 25886368 | 25887082 | 0.000000e+00 | 854.0 |
9 | TraesCS7B01G026800 | chr7B | 96.146 | 519 | 16 | 4 | 7046 | 7560 | 470243613 | 470243095 | 0.000000e+00 | 845.0 |
10 | TraesCS7B01G026800 | chr7B | 88.602 | 658 | 71 | 3 | 5928 | 6583 | 25653932 | 25653277 | 0.000000e+00 | 797.0 |
11 | TraesCS7B01G026800 | chr7B | 88.397 | 655 | 76 | 0 | 5926 | 6580 | 25630447 | 25629793 | 0.000000e+00 | 789.0 |
12 | TraesCS7B01G026800 | chr7B | 85.135 | 740 | 104 | 6 | 5195 | 5932 | 25631212 | 25630477 | 0.000000e+00 | 752.0 |
13 | TraesCS7B01G026800 | chr7B | 85.829 | 621 | 86 | 2 | 5313 | 5932 | 25654583 | 25653964 | 0.000000e+00 | 658.0 |
14 | TraesCS7B01G026800 | chr7B | 84.638 | 345 | 53 | 0 | 4860 | 5204 | 25655072 | 25654728 | 2.020000e-90 | 344.0 |
15 | TraesCS7B01G026800 | chr7B | 82.624 | 282 | 26 | 13 | 6613 | 6875 | 25889625 | 25889902 | 2.120000e-55 | 228.0 |
16 | TraesCS7B01G026800 | chr7B | 93.233 | 133 | 9 | 0 | 6441 | 6573 | 25889412 | 25889544 | 5.980000e-46 | 196.0 |
17 | TraesCS7B01G026800 | chr4B | 97.421 | 2404 | 41 | 2 | 2452 | 4834 | 165044556 | 165042153 | 0.000000e+00 | 4076.0 |
18 | TraesCS7B01G026800 | chr4B | 83.612 | 659 | 86 | 14 | 2433 | 3069 | 618083689 | 618083031 | 3.900000e-167 | 599.0 |
19 | TraesCS7B01G026800 | chr4B | 95.580 | 181 | 8 | 0 | 39 | 219 | 666660158 | 666660338 | 2.670000e-74 | 291.0 |
20 | TraesCS7B01G026800 | chr4B | 95.580 | 181 | 6 | 2 | 39 | 219 | 666696784 | 666696962 | 9.600000e-74 | 289.0 |
21 | TraesCS7B01G026800 | chr1B | 96.839 | 2404 | 51 | 2 | 2433 | 4811 | 642919694 | 642922097 | 0.000000e+00 | 3995.0 |
22 | TraesCS7B01G026800 | chr1B | 96.220 | 1402 | 28 | 2 | 2433 | 3809 | 642916614 | 642918015 | 0.000000e+00 | 2272.0 |
23 | TraesCS7B01G026800 | chr1B | 96.568 | 845 | 23 | 4 | 1238 | 2080 | 211607215 | 211606375 | 0.000000e+00 | 1395.0 |
24 | TraesCS7B01G026800 | chr1B | 96.340 | 847 | 29 | 2 | 1239 | 2085 | 104950820 | 104949976 | 0.000000e+00 | 1391.0 |
25 | TraesCS7B01G026800 | chr1B | 95.030 | 503 | 20 | 5 | 7062 | 7560 | 631822086 | 631822587 | 0.000000e+00 | 785.0 |
26 | TraesCS7B01G026800 | chr1B | 90.361 | 249 | 21 | 2 | 4543 | 4790 | 579787708 | 579787954 | 2.630000e-84 | 324.0 |
27 | TraesCS7B01G026800 | chr7D | 96.646 | 1103 | 37 | 0 | 4830 | 5932 | 78308525 | 78307423 | 0.000000e+00 | 1832.0 |
28 | TraesCS7B01G026800 | chr7D | 94.665 | 656 | 34 | 1 | 5928 | 6583 | 78307391 | 78306737 | 0.000000e+00 | 1016.0 |
29 | TraesCS7B01G026800 | chr7D | 92.434 | 608 | 40 | 5 | 428 | 1035 | 78309145 | 78308544 | 0.000000e+00 | 863.0 |
30 | TraesCS7B01G026800 | chr7D | 88.550 | 655 | 75 | 0 | 5926 | 6580 | 78209278 | 78208624 | 0.000000e+00 | 795.0 |
31 | TraesCS7B01G026800 | chr7D | 87.842 | 658 | 76 | 3 | 5928 | 6583 | 78300785 | 78300130 | 0.000000e+00 | 769.0 |
32 | TraesCS7B01G026800 | chr7D | 84.595 | 740 | 110 | 4 | 5195 | 5932 | 78210045 | 78209308 | 0.000000e+00 | 732.0 |
33 | TraesCS7B01G026800 | chr7D | 85.990 | 621 | 85 | 2 | 5313 | 5932 | 78301436 | 78300817 | 0.000000e+00 | 664.0 |
34 | TraesCS7B01G026800 | chr7D | 83.478 | 345 | 57 | 0 | 4860 | 5204 | 78301925 | 78301581 | 9.460000e-84 | 322.0 |
35 | TraesCS7B01G026800 | chr7D | 78.701 | 385 | 38 | 27 | 6613 | 6961 | 78305985 | 78305609 | 4.590000e-52 | 217.0 |
36 | TraesCS7B01G026800 | chr7D | 92.857 | 140 | 9 | 1 | 6441 | 6580 | 78306199 | 78306061 | 1.290000e-47 | 202.0 |
37 | TraesCS7B01G026800 | chr7D | 80.349 | 229 | 18 | 10 | 1035 | 1241 | 621775775 | 621775552 | 1.700000e-31 | 148.0 |
38 | TraesCS7B01G026800 | chr7D | 93.333 | 75 | 5 | 0 | 961 | 1035 | 78322239 | 78322165 | 2.230000e-20 | 111.0 |
39 | TraesCS7B01G026800 | chr7D | 94.915 | 59 | 3 | 0 | 6964 | 7022 | 78306255 | 78306197 | 8.080000e-15 | 93.5 |
40 | TraesCS7B01G026800 | chr7A | 95.648 | 1103 | 48 | 0 | 4830 | 5932 | 81777401 | 81776299 | 0.000000e+00 | 1772.0 |
41 | TraesCS7B01G026800 | chr7A | 91.983 | 948 | 49 | 15 | 5926 | 6859 | 81776269 | 81775335 | 0.000000e+00 | 1304.0 |
42 | TraesCS7B01G026800 | chr7A | 92.448 | 821 | 43 | 12 | 230 | 1035 | 81778236 | 81777420 | 0.000000e+00 | 1155.0 |
43 | TraesCS7B01G026800 | chr7A | 87.162 | 740 | 91 | 4 | 5195 | 5932 | 81641243 | 81640506 | 0.000000e+00 | 837.0 |
44 | TraesCS7B01G026800 | chr7A | 89.074 | 659 | 72 | 0 | 5926 | 6584 | 81768073 | 81767415 | 0.000000e+00 | 819.0 |
45 | TraesCS7B01G026800 | chr7A | 89.160 | 655 | 71 | 0 | 5926 | 6580 | 81640476 | 81639822 | 0.000000e+00 | 817.0 |
46 | TraesCS7B01G026800 | chr7A | 85.637 | 738 | 90 | 14 | 5200 | 5932 | 81768829 | 81768103 | 0.000000e+00 | 761.0 |
47 | TraesCS7B01G026800 | chr7A | 83.153 | 647 | 84 | 16 | 403 | 1035 | 81642304 | 81641669 | 1.100000e-157 | 568.0 |
48 | TraesCS7B01G026800 | chr7A | 82.051 | 546 | 75 | 10 | 494 | 1035 | 81769786 | 81769260 | 1.940000e-120 | 444.0 |
49 | TraesCS7B01G026800 | chr7A | 83.511 | 376 | 60 | 2 | 4830 | 5204 | 81641650 | 81641276 | 4.340000e-92 | 350.0 |
50 | TraesCS7B01G026800 | chr7A | 97.222 | 180 | 3 | 2 | 40 | 219 | 666676477 | 666676654 | 3.430000e-78 | 303.0 |
51 | TraesCS7B01G026800 | chr7A | 82.319 | 345 | 61 | 0 | 4860 | 5204 | 81769211 | 81768867 | 4.430000e-77 | 300.0 |
52 | TraesCS7B01G026800 | chr7A | 93.069 | 202 | 9 | 5 | 38 | 237 | 399932677 | 399932479 | 2.670000e-74 | 291.0 |
53 | TraesCS7B01G026800 | chr6B | 95.409 | 1089 | 24 | 4 | 2433 | 3495 | 27822061 | 27823149 | 0.000000e+00 | 1711.0 |
54 | TraesCS7B01G026800 | chr6B | 81.346 | 1887 | 291 | 30 | 2435 | 4262 | 481793358 | 481791474 | 0.000000e+00 | 1478.0 |
55 | TraesCS7B01G026800 | chr6B | 94.220 | 519 | 26 | 4 | 7046 | 7560 | 229143737 | 229144255 | 0.000000e+00 | 789.0 |
56 | TraesCS7B01G026800 | chr6B | 89.960 | 249 | 22 | 2 | 4543 | 4790 | 71581787 | 71582033 | 1.220000e-82 | 318.0 |
57 | TraesCS7B01G026800 | chr6B | 89.754 | 244 | 22 | 2 | 4548 | 4790 | 487554915 | 487554674 | 7.370000e-80 | 309.0 |
58 | TraesCS7B01G026800 | chr6B | 94.771 | 153 | 6 | 2 | 2452 | 2603 | 716590373 | 716590524 | 3.530000e-58 | 237.0 |
59 | TraesCS7B01G026800 | chr3B | 97.365 | 835 | 20 | 2 | 1245 | 2077 | 171120912 | 171120078 | 0.000000e+00 | 1419.0 |
60 | TraesCS7B01G026800 | chr3B | 82.297 | 740 | 94 | 19 | 2433 | 3135 | 228676854 | 228676115 | 2.330000e-169 | 606.0 |
61 | TraesCS7B01G026800 | chr3B | 95.028 | 181 | 7 | 2 | 40 | 219 | 477626738 | 477626917 | 4.470000e-72 | 283.0 |
62 | TraesCS7B01G026800 | chr2B | 97.010 | 836 | 22 | 3 | 1243 | 2078 | 683096879 | 683096047 | 0.000000e+00 | 1402.0 |
63 | TraesCS7B01G026800 | chr2B | 95.019 | 522 | 22 | 4 | 7043 | 7560 | 677976818 | 677977339 | 0.000000e+00 | 817.0 |
64 | TraesCS7B01G026800 | chr2B | 94.626 | 521 | 21 | 6 | 7046 | 7560 | 762354173 | 762353654 | 0.000000e+00 | 800.0 |
65 | TraesCS7B01G026800 | chr2B | 94.038 | 520 | 26 | 5 | 7046 | 7560 | 211999116 | 211999635 | 0.000000e+00 | 784.0 |
66 | TraesCS7B01G026800 | chr2B | 90.361 | 249 | 21 | 2 | 4543 | 4790 | 46669892 | 46669646 | 2.630000e-84 | 324.0 |
67 | TraesCS7B01G026800 | chr2B | 89.960 | 249 | 22 | 2 | 4543 | 4790 | 704117906 | 704117660 | 1.220000e-82 | 318.0 |
68 | TraesCS7B01G026800 | chr2B | 92.195 | 205 | 12 | 4 | 39 | 243 | 405271874 | 405271674 | 3.450000e-73 | 287.0 |
69 | TraesCS7B01G026800 | chr2B | 95.000 | 180 | 9 | 0 | 40 | 219 | 78831661 | 78831840 | 4.470000e-72 | 283.0 |
70 | TraesCS7B01G026800 | chr2B | 94.536 | 183 | 8 | 2 | 39 | 220 | 64891594 | 64891775 | 1.610000e-71 | 281.0 |
71 | TraesCS7B01G026800 | chr5B | 96.244 | 852 | 29 | 3 | 1238 | 2088 | 63251590 | 63252439 | 0.000000e+00 | 1393.0 |
72 | TraesCS7B01G026800 | chr5B | 96.244 | 852 | 25 | 7 | 1238 | 2088 | 686832762 | 686831917 | 0.000000e+00 | 1389.0 |
73 | TraesCS7B01G026800 | chr5B | 96.127 | 852 | 30 | 3 | 1233 | 2084 | 281571144 | 281570296 | 0.000000e+00 | 1387.0 |
74 | TraesCS7B01G026800 | chr5B | 95.506 | 178 | 6 | 2 | 42 | 219 | 532890468 | 532890293 | 4.470000e-72 | 283.0 |
75 | TraesCS7B01G026800 | chr6D | 96.731 | 520 | 12 | 5 | 7046 | 7560 | 76067281 | 76066762 | 0.000000e+00 | 861.0 |
76 | TraesCS7B01G026800 | chrUn | 96.339 | 519 | 15 | 4 | 7046 | 7560 | 201220580 | 201221098 | 0.000000e+00 | 850.0 |
77 | TraesCS7B01G026800 | chrUn | 91.358 | 324 | 25 | 2 | 2077 | 2398 | 50131566 | 50131888 | 2.500000e-119 | 440.0 |
78 | TraesCS7B01G026800 | chrUn | 90.093 | 323 | 27 | 3 | 2079 | 2398 | 50135137 | 50135457 | 1.520000e-111 | 414.0 |
79 | TraesCS7B01G026800 | chrUn | 96.809 | 188 | 5 | 1 | 1035 | 1222 | 295726249 | 295726063 | 5.700000e-81 | 313.0 |
80 | TraesCS7B01G026800 | chrUn | 96.809 | 188 | 5 | 1 | 1035 | 1222 | 295741672 | 295741486 | 5.700000e-81 | 313.0 |
81 | TraesCS7B01G026800 | chrUn | 96.809 | 188 | 5 | 1 | 1035 | 1222 | 330472416 | 330472230 | 5.700000e-81 | 313.0 |
82 | TraesCS7B01G026800 | chrUn | 85.507 | 69 | 5 | 2 | 2316 | 2380 | 302638517 | 302638450 | 4.900000e-07 | 67.6 |
83 | TraesCS7B01G026800 | chrUn | 76.087 | 138 | 20 | 10 | 1105 | 1234 | 50131436 | 50131568 | 8.190000e-05 | 60.2 |
84 | TraesCS7B01G026800 | chr2A | 84.787 | 493 | 53 | 9 | 4278 | 4748 | 124289345 | 124288853 | 6.860000e-130 | 475.0 |
85 | TraesCS7B01G026800 | chr2A | 93.204 | 103 | 2 | 1 | 2434 | 2531 | 610980607 | 610980709 | 6.110000e-31 | 147.0 |
86 | TraesCS7B01G026800 | chr2A | 85.714 | 133 | 18 | 1 | 2267 | 2399 | 18394138 | 18394007 | 1.020000e-28 | 139.0 |
87 | TraesCS7B01G026800 | chr4A | 91.358 | 324 | 25 | 2 | 2077 | 2398 | 491604144 | 491603822 | 2.500000e-119 | 440.0 |
88 | TraesCS7B01G026800 | chr4A | 90.407 | 344 | 12 | 6 | 2460 | 2783 | 26016408 | 26016750 | 4.190000e-117 | 433.0 |
89 | TraesCS7B01G026800 | chr4A | 88.957 | 326 | 31 | 3 | 2077 | 2398 | 491600470 | 491600146 | 1.530000e-106 | 398.0 |
90 | TraesCS7B01G026800 | chr4A | 91.071 | 112 | 10 | 0 | 2287 | 2398 | 718788430 | 718788319 | 1.310000e-32 | 152.0 |
91 | TraesCS7B01G026800 | chr5A | 87.768 | 327 | 30 | 5 | 2077 | 2398 | 663098494 | 663098815 | 2.580000e-99 | 374.0 |
92 | TraesCS7B01G026800 | chr3A | 90.556 | 180 | 14 | 2 | 1035 | 1214 | 993324 | 993500 | 1.270000e-57 | 235.0 |
93 | TraesCS7B01G026800 | chr4D | 79.452 | 219 | 20 | 8 | 1035 | 1233 | 115530028 | 115530241 | 1.710000e-26 | 132.0 |
94 | TraesCS7B01G026800 | chr5D | 84.286 | 70 | 5 | 1 | 4242 | 4305 | 410290327 | 410290396 | 6.330000e-06 | 63.9 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G026800 | chr7B | 25661842 | 25669401 | 7559 | True | 13961.000000 | 13961 | 100.000000 | 1 | 7560 | 1 | chr7B.!!$R1 | 7559 |
1 | TraesCS7B01G026800 | chr7B | 707577776 | 707580135 | 2359 | True | 3825.000000 | 3825 | 96.103000 | 2433 | 4766 | 1 | chr7B.!!$R5 | 2333 |
2 | TraesCS7B01G026800 | chr7B | 664046780 | 664047630 | 850 | False | 1397.000000 | 1397 | 96.253000 | 1236 | 2089 | 1 | chr7B.!!$F2 | 853 |
3 | TraesCS7B01G026800 | chr7B | 4216179 | 4217023 | 844 | False | 1389.000000 | 1389 | 96.336000 | 1236 | 2081 | 1 | chr7B.!!$F1 | 845 |
4 | TraesCS7B01G026800 | chr7B | 144514231 | 144515127 | 896 | True | 907.000000 | 907 | 85.572000 | 2452 | 3316 | 1 | chr7B.!!$R2 | 864 |
5 | TraesCS7B01G026800 | chr7B | 470294082 | 470294600 | 518 | True | 856.000000 | 856 | 96.532000 | 7046 | 7560 | 1 | chr7B.!!$R4 | 514 |
6 | TraesCS7B01G026800 | chr7B | 470243095 | 470243613 | 518 | True | 845.000000 | 845 | 96.146000 | 7046 | 7560 | 1 | chr7B.!!$R3 | 514 |
7 | TraesCS7B01G026800 | chr7B | 25886368 | 25889902 | 3534 | False | 821.600000 | 1821 | 91.028000 | 311 | 6875 | 5 | chr7B.!!$F3 | 6564 |
8 | TraesCS7B01G026800 | chr7B | 25629793 | 25631212 | 1419 | True | 770.500000 | 789 | 86.766000 | 5195 | 6580 | 2 | chr7B.!!$R6 | 1385 |
9 | TraesCS7B01G026800 | chr7B | 25653277 | 25655072 | 1795 | True | 599.666667 | 797 | 86.356333 | 4860 | 6583 | 3 | chr7B.!!$R7 | 1723 |
10 | TraesCS7B01G026800 | chr4B | 165042153 | 165044556 | 2403 | True | 4076.000000 | 4076 | 97.421000 | 2452 | 4834 | 1 | chr4B.!!$R1 | 2382 |
11 | TraesCS7B01G026800 | chr4B | 618083031 | 618083689 | 658 | True | 599.000000 | 599 | 83.612000 | 2433 | 3069 | 1 | chr4B.!!$R2 | 636 |
12 | TraesCS7B01G026800 | chr1B | 642916614 | 642922097 | 5483 | False | 3133.500000 | 3995 | 96.529500 | 2433 | 4811 | 2 | chr1B.!!$F3 | 2378 |
13 | TraesCS7B01G026800 | chr1B | 211606375 | 211607215 | 840 | True | 1395.000000 | 1395 | 96.568000 | 1238 | 2080 | 1 | chr1B.!!$R2 | 842 |
14 | TraesCS7B01G026800 | chr1B | 104949976 | 104950820 | 844 | True | 1391.000000 | 1391 | 96.340000 | 1239 | 2085 | 1 | chr1B.!!$R1 | 846 |
15 | TraesCS7B01G026800 | chr1B | 631822086 | 631822587 | 501 | False | 785.000000 | 785 | 95.030000 | 7062 | 7560 | 1 | chr1B.!!$F2 | 498 |
16 | TraesCS7B01G026800 | chr7D | 78208624 | 78210045 | 1421 | True | 763.500000 | 795 | 86.572500 | 5195 | 6580 | 2 | chr7D.!!$R3 | 1385 |
17 | TraesCS7B01G026800 | chr7D | 78300130 | 78309145 | 9015 | True | 664.277778 | 1832 | 89.725333 | 428 | 7022 | 9 | chr7D.!!$R4 | 6594 |
18 | TraesCS7B01G026800 | chr7A | 81775335 | 81778236 | 2901 | True | 1410.333333 | 1772 | 93.359667 | 230 | 6859 | 3 | chr7A.!!$R4 | 6629 |
19 | TraesCS7B01G026800 | chr7A | 81639822 | 81642304 | 2482 | True | 643.000000 | 837 | 85.746500 | 403 | 6580 | 4 | chr7A.!!$R2 | 6177 |
20 | TraesCS7B01G026800 | chr7A | 81767415 | 81769786 | 2371 | True | 581.000000 | 819 | 84.770250 | 494 | 6584 | 4 | chr7A.!!$R3 | 6090 |
21 | TraesCS7B01G026800 | chr6B | 27822061 | 27823149 | 1088 | False | 1711.000000 | 1711 | 95.409000 | 2433 | 3495 | 1 | chr6B.!!$F1 | 1062 |
22 | TraesCS7B01G026800 | chr6B | 481791474 | 481793358 | 1884 | True | 1478.000000 | 1478 | 81.346000 | 2435 | 4262 | 1 | chr6B.!!$R1 | 1827 |
23 | TraesCS7B01G026800 | chr6B | 229143737 | 229144255 | 518 | False | 789.000000 | 789 | 94.220000 | 7046 | 7560 | 1 | chr6B.!!$F3 | 514 |
24 | TraesCS7B01G026800 | chr3B | 171120078 | 171120912 | 834 | True | 1419.000000 | 1419 | 97.365000 | 1245 | 2077 | 1 | chr3B.!!$R1 | 832 |
25 | TraesCS7B01G026800 | chr3B | 228676115 | 228676854 | 739 | True | 606.000000 | 606 | 82.297000 | 2433 | 3135 | 1 | chr3B.!!$R2 | 702 |
26 | TraesCS7B01G026800 | chr2B | 683096047 | 683096879 | 832 | True | 1402.000000 | 1402 | 97.010000 | 1243 | 2078 | 1 | chr2B.!!$R3 | 835 |
27 | TraesCS7B01G026800 | chr2B | 677976818 | 677977339 | 521 | False | 817.000000 | 817 | 95.019000 | 7043 | 7560 | 1 | chr2B.!!$F4 | 517 |
28 | TraesCS7B01G026800 | chr2B | 762353654 | 762354173 | 519 | True | 800.000000 | 800 | 94.626000 | 7046 | 7560 | 1 | chr2B.!!$R5 | 514 |
29 | TraesCS7B01G026800 | chr2B | 211999116 | 211999635 | 519 | False | 784.000000 | 784 | 94.038000 | 7046 | 7560 | 1 | chr2B.!!$F3 | 514 |
30 | TraesCS7B01G026800 | chr5B | 63251590 | 63252439 | 849 | False | 1393.000000 | 1393 | 96.244000 | 1238 | 2088 | 1 | chr5B.!!$F1 | 850 |
31 | TraesCS7B01G026800 | chr5B | 686831917 | 686832762 | 845 | True | 1389.000000 | 1389 | 96.244000 | 1238 | 2088 | 1 | chr5B.!!$R3 | 850 |
32 | TraesCS7B01G026800 | chr5B | 281570296 | 281571144 | 848 | True | 1387.000000 | 1387 | 96.127000 | 1233 | 2084 | 1 | chr5B.!!$R1 | 851 |
33 | TraesCS7B01G026800 | chr6D | 76066762 | 76067281 | 519 | True | 861.000000 | 861 | 96.731000 | 7046 | 7560 | 1 | chr6D.!!$R1 | 514 |
34 | TraesCS7B01G026800 | chrUn | 201220580 | 201221098 | 518 | False | 850.000000 | 850 | 96.339000 | 7046 | 7560 | 1 | chrUn.!!$F1 | 514 |
35 | TraesCS7B01G026800 | chrUn | 50131436 | 50135457 | 4021 | False | 304.733333 | 440 | 85.846000 | 1105 | 2398 | 3 | chrUn.!!$F2 | 1293 |
36 | TraesCS7B01G026800 | chr4A | 491600146 | 491604144 | 3998 | True | 419.000000 | 440 | 90.157500 | 2077 | 2398 | 2 | chr4A.!!$R2 | 321 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
116 | 117 | 0.034089 | CCAATCACCAACCTCTCCCC | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 | F |
117 | 118 | 0.034089 | CAATCACCAACCTCTCCCCC | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 | F |
1086 | 1122 | 0.039798 | GCGGATCGTATACGGAGCAA | 60.040 | 55.000 | 24.18 | 5.75 | 37.01 | 3.91 | F |
1097 | 1133 | 0.537188 | ACGGAGCAATCACCTAGGTG | 59.463 | 55.000 | 32.61 | 32.61 | 46.64 | 4.00 | F |
2398 | 6210 | 0.179073 | CATCGGGTCTAGGCCAACAG | 60.179 | 60.000 | 16.93 | 3.34 | 0.00 | 3.16 | F |
2430 | 6242 | 1.000496 | GTAGCGTATACTGGCCTGACC | 60.000 | 57.143 | 17.64 | 0.04 | 39.84 | 4.02 | F |
3073 | 6927 | 1.002990 | TCTCCACACATGCAGGCTG | 60.003 | 57.895 | 10.94 | 10.94 | 0.00 | 4.85 | F |
3537 | 10475 | 0.666274 | TTCGCTGTCGACATCCACAC | 60.666 | 55.000 | 20.40 | 3.93 | 45.43 | 3.82 | F |
4962 | 11918 | 1.093159 | GCAGCTTCTGATCTTGGTGG | 58.907 | 55.000 | 0.00 | 0.00 | 32.44 | 4.61 | F |
5296 | 12372 | 1.375523 | GGAGCGGGTGACAATTCGT | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1067 | 1103 | 0.039798 | TTGCTCCGTATACGATCCGC | 60.040 | 55.000 | 26.37 | 20.04 | 43.02 | 5.54 | R |
1088 | 1124 | 0.249699 | TGCACGTGTTCACCTAGGTG | 60.250 | 55.000 | 32.61 | 32.61 | 46.64 | 4.00 | R |
2326 | 6137 | 0.589708 | ACGAACGACGATGACAGACA | 59.410 | 50.000 | 0.00 | 0.00 | 45.77 | 3.41 | R |
2872 | 6711 | 0.617935 | TGGGAAGACGATTGGATGCA | 59.382 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 | R |
3302 | 7156 | 0.254178 | ATGGACGAGAAGCATGCCTT | 59.746 | 50.000 | 15.66 | 8.13 | 36.19 | 4.35 | R |
3537 | 10475 | 0.318120 | GTTGGGAATGTTGCTGGTGG | 59.682 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 | R |
4835 | 11791 | 2.033602 | CGGGGTGGTGAAAGGGTC | 59.966 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 | R |
5441 | 12517 | 0.320508 | GACGAAGACAACACTCCCCC | 60.321 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 | R |
5926 | 13003 | 0.776810 | TGGCCAAGGAACCATTCTCA | 59.223 | 50.000 | 0.61 | 0.00 | 0.00 | 3.27 | R |
7006 | 21466 | 0.250124 | TGGCGAACTGGTGATCGTTT | 60.250 | 50.000 | 0.00 | 0.00 | 40.02 | 3.60 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
28 | 29 | 3.479203 | CCGTCCAGGCCCATAGCA | 61.479 | 66.667 | 0.00 | 0.00 | 46.50 | 3.49 |
29 | 30 | 2.822637 | CCGTCCAGGCCCATAGCAT | 61.823 | 63.158 | 0.00 | 0.00 | 46.50 | 3.79 |
35 | 36 | 3.565979 | AGGCCCATAGCATGAGAGA | 57.434 | 52.632 | 0.00 | 0.00 | 46.50 | 3.10 |
36 | 37 | 2.041824 | AGGCCCATAGCATGAGAGAT | 57.958 | 50.000 | 0.00 | 0.00 | 46.50 | 2.75 |
37 | 38 | 2.346529 | AGGCCCATAGCATGAGAGATT | 58.653 | 47.619 | 0.00 | 0.00 | 46.50 | 2.40 |
38 | 39 | 2.040012 | AGGCCCATAGCATGAGAGATTG | 59.960 | 50.000 | 0.00 | 0.00 | 46.50 | 2.67 |
39 | 40 | 1.811359 | GCCCATAGCATGAGAGATTGC | 59.189 | 52.381 | 0.00 | 0.00 | 42.97 | 3.56 |
40 | 41 | 2.812983 | GCCCATAGCATGAGAGATTGCA | 60.813 | 50.000 | 0.00 | 0.00 | 41.35 | 4.08 |
41 | 42 | 3.483421 | CCCATAGCATGAGAGATTGCAA | 58.517 | 45.455 | 0.00 | 0.00 | 41.35 | 4.08 |
42 | 43 | 3.887110 | CCCATAGCATGAGAGATTGCAAA | 59.113 | 43.478 | 1.71 | 0.00 | 41.35 | 3.68 |
43 | 44 | 4.340097 | CCCATAGCATGAGAGATTGCAAAA | 59.660 | 41.667 | 1.71 | 0.00 | 41.35 | 2.44 |
44 | 45 | 5.163488 | CCCATAGCATGAGAGATTGCAAAAA | 60.163 | 40.000 | 1.71 | 0.00 | 41.35 | 1.94 |
45 | 46 | 6.462487 | CCCATAGCATGAGAGATTGCAAAAAT | 60.462 | 38.462 | 1.71 | 0.00 | 41.35 | 1.82 |
46 | 47 | 6.420903 | CCATAGCATGAGAGATTGCAAAAATG | 59.579 | 38.462 | 1.71 | 2.89 | 41.35 | 2.32 |
47 | 48 | 4.181578 | AGCATGAGAGATTGCAAAAATGC | 58.818 | 39.130 | 1.71 | 12.31 | 41.35 | 3.56 |
48 | 49 | 4.081642 | AGCATGAGAGATTGCAAAAATGCT | 60.082 | 37.500 | 19.42 | 19.42 | 43.37 | 3.79 |
49 | 50 | 5.126545 | AGCATGAGAGATTGCAAAAATGCTA | 59.873 | 36.000 | 21.76 | 0.00 | 45.57 | 3.49 |
50 | 51 | 5.459107 | GCATGAGAGATTGCAAAAATGCTAG | 59.541 | 40.000 | 1.71 | 0.00 | 38.72 | 3.42 |
51 | 52 | 6.679638 | GCATGAGAGATTGCAAAAATGCTAGA | 60.680 | 38.462 | 1.71 | 0.00 | 38.72 | 2.43 |
52 | 53 | 6.187125 | TGAGAGATTGCAAAAATGCTAGAC | 57.813 | 37.500 | 1.71 | 0.00 | 35.49 | 2.59 |
53 | 54 | 5.706833 | TGAGAGATTGCAAAAATGCTAGACA | 59.293 | 36.000 | 1.71 | 0.00 | 35.49 | 3.41 |
54 | 55 | 6.376299 | TGAGAGATTGCAAAAATGCTAGACAT | 59.624 | 34.615 | 1.71 | 0.00 | 42.30 | 3.06 |
55 | 56 | 7.553760 | TGAGAGATTGCAAAAATGCTAGACATA | 59.446 | 33.333 | 1.71 | 0.00 | 38.34 | 2.29 |
56 | 57 | 7.701445 | AGAGATTGCAAAAATGCTAGACATAC | 58.299 | 34.615 | 1.71 | 0.00 | 38.34 | 2.39 |
57 | 58 | 7.337689 | AGAGATTGCAAAAATGCTAGACATACA | 59.662 | 33.333 | 1.71 | 0.00 | 38.34 | 2.29 |
58 | 59 | 7.829725 | AGATTGCAAAAATGCTAGACATACAA | 58.170 | 30.769 | 1.71 | 0.00 | 38.34 | 2.41 |
59 | 60 | 8.306038 | AGATTGCAAAAATGCTAGACATACAAA | 58.694 | 29.630 | 1.71 | 0.00 | 38.34 | 2.83 |
60 | 61 | 7.872163 | TTGCAAAAATGCTAGACATACAAAG | 57.128 | 32.000 | 0.00 | 0.00 | 38.34 | 2.77 |
61 | 62 | 7.213216 | TGCAAAAATGCTAGACATACAAAGA | 57.787 | 32.000 | 0.00 | 0.00 | 38.34 | 2.52 |
62 | 63 | 7.083858 | TGCAAAAATGCTAGACATACAAAGAC | 58.916 | 34.615 | 0.00 | 0.00 | 38.34 | 3.01 |
63 | 64 | 7.040478 | TGCAAAAATGCTAGACATACAAAGACT | 60.040 | 33.333 | 0.00 | 0.00 | 38.34 | 3.24 |
64 | 65 | 7.809806 | GCAAAAATGCTAGACATACAAAGACTT | 59.190 | 33.333 | 0.00 | 0.00 | 38.34 | 3.01 |
67 | 68 | 9.502091 | AAAATGCTAGACATACAAAGACTTACA | 57.498 | 29.630 | 0.00 | 0.00 | 38.34 | 2.41 |
68 | 69 | 8.480643 | AATGCTAGACATACAAAGACTTACAC | 57.519 | 34.615 | 0.00 | 0.00 | 38.34 | 2.90 |
69 | 70 | 6.988522 | TGCTAGACATACAAAGACTTACACA | 58.011 | 36.000 | 0.00 | 0.00 | 0.00 | 3.72 |
70 | 71 | 6.866770 | TGCTAGACATACAAAGACTTACACAC | 59.133 | 38.462 | 0.00 | 0.00 | 0.00 | 3.82 |
71 | 72 | 7.091443 | GCTAGACATACAAAGACTTACACACT | 58.909 | 38.462 | 0.00 | 0.00 | 0.00 | 3.55 |
72 | 73 | 7.599245 | GCTAGACATACAAAGACTTACACACTT | 59.401 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
73 | 74 | 9.477484 | CTAGACATACAAAGACTTACACACTTT | 57.523 | 33.333 | 0.00 | 0.00 | 34.77 | 2.66 |
74 | 75 | 8.732746 | AGACATACAAAGACTTACACACTTTT | 57.267 | 30.769 | 0.00 | 0.00 | 32.59 | 2.27 |
75 | 76 | 9.826574 | AGACATACAAAGACTTACACACTTTTA | 57.173 | 29.630 | 0.00 | 0.00 | 32.59 | 1.52 |
76 | 77 | 9.859692 | GACATACAAAGACTTACACACTTTTAC | 57.140 | 33.333 | 0.00 | 0.00 | 32.59 | 2.01 |
77 | 78 | 9.386010 | ACATACAAAGACTTACACACTTTTACA | 57.614 | 29.630 | 0.00 | 0.00 | 32.59 | 2.41 |
78 | 79 | 9.646336 | CATACAAAGACTTACACACTTTTACAC | 57.354 | 33.333 | 0.00 | 0.00 | 32.59 | 2.90 |
79 | 80 | 6.768078 | ACAAAGACTTACACACTTTTACACG | 58.232 | 36.000 | 0.00 | 0.00 | 32.59 | 4.49 |
80 | 81 | 5.399604 | AAGACTTACACACTTTTACACGC | 57.600 | 39.130 | 0.00 | 0.00 | 0.00 | 5.34 |
81 | 82 | 4.690122 | AGACTTACACACTTTTACACGCT | 58.310 | 39.130 | 0.00 | 0.00 | 0.00 | 5.07 |
82 | 83 | 5.114081 | AGACTTACACACTTTTACACGCTT | 58.886 | 37.500 | 0.00 | 0.00 | 0.00 | 4.68 |
83 | 84 | 5.233689 | AGACTTACACACTTTTACACGCTTC | 59.766 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
84 | 85 | 5.114081 | ACTTACACACTTTTACACGCTTCT | 58.886 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
85 | 86 | 5.583457 | ACTTACACACTTTTACACGCTTCTT | 59.417 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
86 | 87 | 4.531659 | ACACACTTTTACACGCTTCTTC | 57.468 | 40.909 | 0.00 | 0.00 | 0.00 | 2.87 |
87 | 88 | 3.311596 | ACACACTTTTACACGCTTCTTCC | 59.688 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
88 | 89 | 3.311322 | CACACTTTTACACGCTTCTTCCA | 59.689 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
89 | 90 | 4.024048 | CACACTTTTACACGCTTCTTCCAT | 60.024 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
90 | 91 | 4.213482 | ACACTTTTACACGCTTCTTCCATC | 59.787 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
91 | 92 | 4.452455 | CACTTTTACACGCTTCTTCCATCT | 59.548 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
92 | 93 | 5.637810 | CACTTTTACACGCTTCTTCCATCTA | 59.362 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
93 | 94 | 6.147164 | CACTTTTACACGCTTCTTCCATCTAA | 59.853 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
94 | 95 | 6.147328 | ACTTTTACACGCTTCTTCCATCTAAC | 59.853 | 38.462 | 0.00 | 0.00 | 0.00 | 2.34 |
95 | 96 | 3.678056 | ACACGCTTCTTCCATCTAACA | 57.322 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
96 | 97 | 4.002906 | ACACGCTTCTTCCATCTAACAA | 57.997 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
97 | 98 | 3.746492 | ACACGCTTCTTCCATCTAACAAC | 59.254 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
98 | 99 | 3.125316 | CACGCTTCTTCCATCTAACAACC | 59.875 | 47.826 | 0.00 | 0.00 | 0.00 | 3.77 |
99 | 100 | 3.244422 | ACGCTTCTTCCATCTAACAACCA | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
100 | 101 | 3.751175 | CGCTTCTTCCATCTAACAACCAA | 59.249 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
101 | 102 | 4.396166 | CGCTTCTTCCATCTAACAACCAAT | 59.604 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
102 | 103 | 5.447818 | CGCTTCTTCCATCTAACAACCAATC | 60.448 | 44.000 | 0.00 | 0.00 | 0.00 | 2.67 |
103 | 104 | 5.415701 | GCTTCTTCCATCTAACAACCAATCA | 59.584 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
104 | 105 | 6.623767 | GCTTCTTCCATCTAACAACCAATCAC | 60.624 | 42.308 | 0.00 | 0.00 | 0.00 | 3.06 |
105 | 106 | 5.253330 | TCTTCCATCTAACAACCAATCACC | 58.747 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
106 | 107 | 4.649267 | TCCATCTAACAACCAATCACCA | 57.351 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
107 | 108 | 4.991776 | TCCATCTAACAACCAATCACCAA | 58.008 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
108 | 109 | 4.764823 | TCCATCTAACAACCAATCACCAAC | 59.235 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
109 | 110 | 4.082245 | CCATCTAACAACCAATCACCAACC | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 3.77 |
110 | 111 | 4.447138 | TCTAACAACCAATCACCAACCT | 57.553 | 40.909 | 0.00 | 0.00 | 0.00 | 3.50 |
111 | 112 | 4.394729 | TCTAACAACCAATCACCAACCTC | 58.605 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
112 | 113 | 3.312736 | AACAACCAATCACCAACCTCT | 57.687 | 42.857 | 0.00 | 0.00 | 0.00 | 3.69 |
113 | 114 | 2.863809 | ACAACCAATCACCAACCTCTC | 58.136 | 47.619 | 0.00 | 0.00 | 0.00 | 3.20 |
114 | 115 | 2.162681 | CAACCAATCACCAACCTCTCC | 58.837 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
115 | 116 | 0.698818 | ACCAATCACCAACCTCTCCC | 59.301 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
116 | 117 | 0.034089 | CCAATCACCAACCTCTCCCC | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
117 | 118 | 0.034089 | CAATCACCAACCTCTCCCCC | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 |
135 | 136 | 3.677156 | CCCCCTGATTTTCAGAGGAAT | 57.323 | 47.619 | 6.64 | 0.00 | 44.24 | 3.01 |
136 | 137 | 3.294214 | CCCCCTGATTTTCAGAGGAATG | 58.706 | 50.000 | 6.64 | 0.00 | 44.24 | 2.67 |
137 | 138 | 3.294214 | CCCCTGATTTTCAGAGGAATGG | 58.706 | 50.000 | 6.09 | 0.00 | 44.24 | 3.16 |
138 | 139 | 3.942909 | CCCCTGATTTTCAGAGGAATGGG | 60.943 | 52.174 | 6.09 | 3.50 | 44.24 | 4.00 |
140 | 141 | 2.738743 | TGATTTTCAGAGGAATGGGCC | 58.261 | 47.619 | 0.00 | 0.00 | 31.93 | 5.80 |
141 | 142 | 1.678101 | GATTTTCAGAGGAATGGGCCG | 59.322 | 52.381 | 0.00 | 0.00 | 31.93 | 6.13 |
142 | 143 | 0.965363 | TTTTCAGAGGAATGGGCCGC | 60.965 | 55.000 | 0.00 | 0.00 | 31.93 | 6.53 |
143 | 144 | 2.837031 | TTTCAGAGGAATGGGCCGCC | 62.837 | 60.000 | 0.00 | 0.00 | 31.93 | 6.13 |
144 | 145 | 4.883354 | CAGAGGAATGGGCCGCCC | 62.883 | 72.222 | 22.81 | 22.81 | 45.71 | 6.13 |
155 | 156 | 4.008933 | GCCGCCCCGCTCATCTAT | 62.009 | 66.667 | 0.00 | 0.00 | 0.00 | 1.98 |
156 | 157 | 2.743718 | CCGCCCCGCTCATCTATT | 59.256 | 61.111 | 0.00 | 0.00 | 0.00 | 1.73 |
157 | 158 | 1.669115 | CCGCCCCGCTCATCTATTG | 60.669 | 63.158 | 0.00 | 0.00 | 0.00 | 1.90 |
158 | 159 | 1.367471 | CGCCCCGCTCATCTATTGA | 59.633 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
159 | 160 | 0.946221 | CGCCCCGCTCATCTATTGAC | 60.946 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
160 | 161 | 0.603975 | GCCCCGCTCATCTATTGACC | 60.604 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
161 | 162 | 0.758734 | CCCCGCTCATCTATTGACCA | 59.241 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
162 | 163 | 1.140852 | CCCCGCTCATCTATTGACCAA | 59.859 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
163 | 164 | 2.224621 | CCCCGCTCATCTATTGACCAAT | 60.225 | 50.000 | 0.64 | 0.64 | 34.93 | 3.16 |
164 | 165 | 3.070018 | CCCGCTCATCTATTGACCAATC | 58.930 | 50.000 | 0.00 | 0.00 | 32.50 | 2.67 |
165 | 166 | 3.494924 | CCCGCTCATCTATTGACCAATCA | 60.495 | 47.826 | 0.00 | 0.00 | 32.50 | 2.57 |
177 | 178 | 5.975693 | TTGACCAATCAAGGTTAACCATC | 57.024 | 39.130 | 26.26 | 10.34 | 43.38 | 3.51 |
178 | 179 | 4.340617 | TGACCAATCAAGGTTAACCATCC | 58.659 | 43.478 | 26.26 | 0.00 | 43.38 | 3.51 |
179 | 180 | 4.044065 | TGACCAATCAAGGTTAACCATCCT | 59.956 | 41.667 | 26.26 | 2.59 | 43.38 | 3.24 |
180 | 181 | 4.344104 | ACCAATCAAGGTTAACCATCCTG | 58.656 | 43.478 | 26.26 | 16.38 | 39.34 | 3.86 |
181 | 182 | 4.202673 | ACCAATCAAGGTTAACCATCCTGT | 60.203 | 41.667 | 26.26 | 11.13 | 39.34 | 4.00 |
182 | 183 | 5.014755 | ACCAATCAAGGTTAACCATCCTGTA | 59.985 | 40.000 | 26.26 | 5.02 | 39.34 | 2.74 |
183 | 184 | 5.949354 | CCAATCAAGGTTAACCATCCTGTAA | 59.051 | 40.000 | 26.26 | 3.53 | 38.89 | 2.41 |
184 | 185 | 6.435904 | CCAATCAAGGTTAACCATCCTGTAAA | 59.564 | 38.462 | 26.26 | 3.51 | 38.89 | 2.01 |
185 | 186 | 7.039363 | CCAATCAAGGTTAACCATCCTGTAAAA | 60.039 | 37.037 | 26.26 | 3.19 | 38.89 | 1.52 |
186 | 187 | 7.703058 | ATCAAGGTTAACCATCCTGTAAAAG | 57.297 | 36.000 | 26.26 | 0.00 | 38.89 | 2.27 |
187 | 188 | 5.475564 | TCAAGGTTAACCATCCTGTAAAAGC | 59.524 | 40.000 | 26.26 | 0.00 | 38.89 | 3.51 |
188 | 189 | 4.341487 | AGGTTAACCATCCTGTAAAAGCC | 58.659 | 43.478 | 26.26 | 0.00 | 38.89 | 4.35 |
189 | 190 | 4.044191 | AGGTTAACCATCCTGTAAAAGCCT | 59.956 | 41.667 | 26.26 | 0.00 | 38.89 | 4.58 |
190 | 191 | 4.157840 | GGTTAACCATCCTGTAAAAGCCTG | 59.842 | 45.833 | 20.12 | 0.00 | 35.64 | 4.85 |
191 | 192 | 3.525800 | AACCATCCTGTAAAAGCCTGT | 57.474 | 42.857 | 0.00 | 0.00 | 0.00 | 4.00 |
192 | 193 | 4.650972 | AACCATCCTGTAAAAGCCTGTA | 57.349 | 40.909 | 0.00 | 0.00 | 0.00 | 2.74 |
193 | 194 | 4.650972 | ACCATCCTGTAAAAGCCTGTAA | 57.349 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
194 | 195 | 4.993028 | ACCATCCTGTAAAAGCCTGTAAA | 58.007 | 39.130 | 0.00 | 0.00 | 0.00 | 2.01 |
195 | 196 | 5.580022 | ACCATCCTGTAAAAGCCTGTAAAT | 58.420 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
196 | 197 | 5.652452 | ACCATCCTGTAAAAGCCTGTAAATC | 59.348 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
197 | 198 | 5.220854 | CCATCCTGTAAAAGCCTGTAAATCG | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 3.34 |
198 | 199 | 4.901868 | TCCTGTAAAAGCCTGTAAATCGT | 58.098 | 39.130 | 0.00 | 0.00 | 0.00 | 3.73 |
199 | 200 | 5.310451 | TCCTGTAAAAGCCTGTAAATCGTT | 58.690 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
200 | 201 | 5.766174 | TCCTGTAAAAGCCTGTAAATCGTTT | 59.234 | 36.000 | 0.00 | 0.00 | 0.00 | 3.60 |
201 | 202 | 5.856455 | CCTGTAAAAGCCTGTAAATCGTTTG | 59.144 | 40.000 | 0.00 | 0.00 | 0.00 | 2.93 |
202 | 203 | 6.380095 | TGTAAAAGCCTGTAAATCGTTTGT | 57.620 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
203 | 204 | 7.308109 | CCTGTAAAAGCCTGTAAATCGTTTGTA | 60.308 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
204 | 205 | 7.354257 | TGTAAAAGCCTGTAAATCGTTTGTAC | 58.646 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
216 | 217 | 2.492001 | CGTTTGTACGTGTAGCATTGC | 58.508 | 47.619 | 0.00 | 0.00 | 42.72 | 3.56 |
217 | 218 | 2.723618 | CGTTTGTACGTGTAGCATTGCC | 60.724 | 50.000 | 4.70 | 0.00 | 42.72 | 4.52 |
218 | 219 | 1.072391 | TTGTACGTGTAGCATTGCCG | 58.928 | 50.000 | 4.70 | 4.23 | 0.00 | 5.69 |
219 | 220 | 0.738063 | TGTACGTGTAGCATTGCCGG | 60.738 | 55.000 | 4.70 | 0.00 | 0.00 | 6.13 |
220 | 221 | 0.458889 | GTACGTGTAGCATTGCCGGA | 60.459 | 55.000 | 5.05 | 0.00 | 0.00 | 5.14 |
221 | 222 | 0.179121 | TACGTGTAGCATTGCCGGAG | 60.179 | 55.000 | 5.05 | 0.00 | 0.00 | 4.63 |
222 | 223 | 1.153647 | CGTGTAGCATTGCCGGAGA | 60.154 | 57.895 | 5.05 | 0.00 | 0.00 | 3.71 |
223 | 224 | 1.148157 | CGTGTAGCATTGCCGGAGAG | 61.148 | 60.000 | 5.05 | 0.00 | 0.00 | 3.20 |
224 | 225 | 0.175760 | GTGTAGCATTGCCGGAGAGA | 59.824 | 55.000 | 5.05 | 0.00 | 0.00 | 3.10 |
225 | 226 | 1.123077 | TGTAGCATTGCCGGAGAGAT | 58.877 | 50.000 | 5.05 | 0.00 | 0.00 | 2.75 |
226 | 227 | 1.486310 | TGTAGCATTGCCGGAGAGATT | 59.514 | 47.619 | 5.05 | 0.00 | 0.00 | 2.40 |
227 | 228 | 1.869767 | GTAGCATTGCCGGAGAGATTG | 59.130 | 52.381 | 5.05 | 0.00 | 0.00 | 2.67 |
228 | 229 | 0.543277 | AGCATTGCCGGAGAGATTGA | 59.457 | 50.000 | 5.05 | 0.00 | 0.00 | 2.57 |
291 | 292 | 2.025636 | AGGCCCTGTACTGTACACTT | 57.974 | 50.000 | 16.26 | 1.60 | 34.46 | 3.16 |
385 | 388 | 6.465084 | GTGGAACTACAAGTTAGAACCAGAT | 58.535 | 40.000 | 0.00 | 0.00 | 38.80 | 2.90 |
423 | 426 | 2.027460 | CGGCCACCAAAAGTGCAC | 59.973 | 61.111 | 9.40 | 9.40 | 45.83 | 4.57 |
439 | 442 | 1.141858 | TGCACACACCTTCACCACATA | 59.858 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
455 | 458 | 4.161189 | ACCACATACATCTCACTCCTTCTG | 59.839 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
459 | 462 | 2.533916 | ACATCTCACTCCTTCTGCTGA | 58.466 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
464 | 470 | 4.540715 | TCTCACTCCTTCTGCTGATGATA | 58.459 | 43.478 | 7.90 | 0.00 | 0.00 | 2.15 |
560 | 587 | 1.382240 | CACCAAGGCCACCACCATA | 59.618 | 57.895 | 5.01 | 0.00 | 0.00 | 2.74 |
571 | 598 | 0.926293 | ACCACCATAACCATCCTGGG | 59.074 | 55.000 | 0.00 | 0.00 | 43.37 | 4.45 |
641 | 668 | 1.556911 | GCCTTCACCTTCTCCATCTGA | 59.443 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
737 | 773 | 4.083862 | AGGCTCGCCTTCCGGAAC | 62.084 | 66.667 | 14.35 | 3.42 | 45.70 | 3.62 |
805 | 841 | 4.953868 | CAACACGACCGCGACCCA | 62.954 | 66.667 | 8.23 | 0.00 | 41.64 | 4.51 |
1035 | 1071 | 0.107654 | GCTCATCTACAACGGCCCTT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1036 | 1072 | 1.656652 | CTCATCTACAACGGCCCTTG | 58.343 | 55.000 | 12.36 | 12.36 | 0.00 | 3.61 |
1037 | 1073 | 0.981183 | TCATCTACAACGGCCCTTGT | 59.019 | 50.000 | 21.49 | 21.49 | 38.03 | 3.16 |
1038 | 1074 | 1.349688 | TCATCTACAACGGCCCTTGTT | 59.650 | 47.619 | 22.67 | 7.05 | 35.87 | 2.83 |
1042 | 1078 | 3.849064 | CAACGGCCCTTGTTGGAA | 58.151 | 55.556 | 12.70 | 0.00 | 42.27 | 3.53 |
1043 | 1079 | 1.659794 | CAACGGCCCTTGTTGGAAG | 59.340 | 57.895 | 12.70 | 0.00 | 42.27 | 3.46 |
1044 | 1080 | 1.106944 | CAACGGCCCTTGTTGGAAGT | 61.107 | 55.000 | 12.70 | 0.00 | 42.27 | 3.01 |
1045 | 1081 | 0.475044 | AACGGCCCTTGTTGGAAGTA | 59.525 | 50.000 | 0.00 | 0.00 | 38.35 | 2.24 |
1046 | 1082 | 0.475044 | ACGGCCCTTGTTGGAAGTAA | 59.525 | 50.000 | 0.00 | 0.00 | 38.35 | 2.24 |
1047 | 1083 | 1.133730 | ACGGCCCTTGTTGGAAGTAAA | 60.134 | 47.619 | 0.00 | 0.00 | 38.35 | 2.01 |
1048 | 1084 | 1.268625 | CGGCCCTTGTTGGAAGTAAAC | 59.731 | 52.381 | 0.00 | 0.00 | 38.35 | 2.01 |
1049 | 1085 | 1.616865 | GGCCCTTGTTGGAAGTAAACC | 59.383 | 52.381 | 0.00 | 0.00 | 38.35 | 3.27 |
1050 | 1086 | 1.616865 | GCCCTTGTTGGAAGTAAACCC | 59.383 | 52.381 | 0.00 | 0.00 | 38.35 | 4.11 |
1051 | 1087 | 1.883926 | CCCTTGTTGGAAGTAAACCCG | 59.116 | 52.381 | 0.00 | 0.00 | 38.35 | 5.28 |
1052 | 1088 | 2.487625 | CCCTTGTTGGAAGTAAACCCGA | 60.488 | 50.000 | 0.00 | 0.00 | 38.35 | 5.14 |
1053 | 1089 | 2.551032 | CCTTGTTGGAAGTAAACCCGAC | 59.449 | 50.000 | 0.00 | 0.00 | 38.35 | 4.79 |
1054 | 1090 | 1.868469 | TGTTGGAAGTAAACCCGACG | 58.132 | 50.000 | 0.00 | 0.00 | 39.23 | 5.12 |
1055 | 1091 | 1.138661 | TGTTGGAAGTAAACCCGACGT | 59.861 | 47.619 | 0.00 | 0.00 | 39.23 | 4.34 |
1056 | 1092 | 2.363680 | TGTTGGAAGTAAACCCGACGTA | 59.636 | 45.455 | 0.00 | 0.00 | 39.23 | 3.57 |
1057 | 1093 | 2.989166 | GTTGGAAGTAAACCCGACGTAG | 59.011 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1083 | 1119 | 3.048942 | GTATGCGGATCGTATACGGAG | 57.951 | 52.381 | 24.18 | 13.88 | 41.32 | 4.63 |
1084 | 1120 | 0.170561 | ATGCGGATCGTATACGGAGC | 59.829 | 55.000 | 24.18 | 21.63 | 41.32 | 4.70 |
1085 | 1121 | 1.167781 | TGCGGATCGTATACGGAGCA | 61.168 | 55.000 | 24.18 | 23.54 | 37.01 | 4.26 |
1086 | 1122 | 0.039798 | GCGGATCGTATACGGAGCAA | 60.040 | 55.000 | 24.18 | 5.75 | 37.01 | 3.91 |
1087 | 1123 | 1.402456 | GCGGATCGTATACGGAGCAAT | 60.402 | 52.381 | 24.18 | 10.52 | 37.01 | 3.56 |
1088 | 1124 | 2.516923 | CGGATCGTATACGGAGCAATC | 58.483 | 52.381 | 24.18 | 17.83 | 40.29 | 2.67 |
1089 | 1125 | 2.095415 | CGGATCGTATACGGAGCAATCA | 60.095 | 50.000 | 24.18 | 3.49 | 40.29 | 2.57 |
1090 | 1126 | 3.243336 | GGATCGTATACGGAGCAATCAC | 58.757 | 50.000 | 24.18 | 9.95 | 40.29 | 3.06 |
1091 | 1127 | 2.787601 | TCGTATACGGAGCAATCACC | 57.212 | 50.000 | 24.18 | 0.00 | 40.29 | 4.02 |
1092 | 1128 | 2.304092 | TCGTATACGGAGCAATCACCT | 58.696 | 47.619 | 24.18 | 0.00 | 40.29 | 4.00 |
1093 | 1129 | 3.479489 | TCGTATACGGAGCAATCACCTA | 58.521 | 45.455 | 24.18 | 0.00 | 40.29 | 3.08 |
1094 | 1130 | 3.501062 | TCGTATACGGAGCAATCACCTAG | 59.499 | 47.826 | 24.18 | 0.00 | 40.29 | 3.02 |
1095 | 1131 | 3.366070 | CGTATACGGAGCAATCACCTAGG | 60.366 | 52.174 | 17.61 | 7.41 | 35.37 | 3.02 |
1096 | 1132 | 2.154567 | TACGGAGCAATCACCTAGGT | 57.845 | 50.000 | 9.21 | 9.21 | 0.00 | 3.08 |
1097 | 1133 | 0.537188 | ACGGAGCAATCACCTAGGTG | 59.463 | 55.000 | 32.61 | 32.61 | 46.64 | 4.00 |
1107 | 1143 | 2.129620 | ACCTAGGTGAACACGTGCA | 58.870 | 52.632 | 15.42 | 3.18 | 0.00 | 4.57 |
1108 | 1144 | 0.685097 | ACCTAGGTGAACACGTGCAT | 59.315 | 50.000 | 15.42 | 4.50 | 0.00 | 3.96 |
1109 | 1145 | 1.078709 | CCTAGGTGAACACGTGCATG | 58.921 | 55.000 | 17.22 | 3.82 | 0.00 | 4.06 |
1110 | 1146 | 1.608025 | CCTAGGTGAACACGTGCATGT | 60.608 | 52.381 | 17.22 | 5.51 | 0.00 | 3.21 |
1111 | 1147 | 2.353307 | CCTAGGTGAACACGTGCATGTA | 60.353 | 50.000 | 17.22 | 0.00 | 30.75 | 2.29 |
1112 | 1148 | 2.472695 | AGGTGAACACGTGCATGTAT | 57.527 | 45.000 | 17.22 | 0.00 | 30.75 | 2.29 |
1113 | 1149 | 3.603158 | AGGTGAACACGTGCATGTATA | 57.397 | 42.857 | 17.22 | 0.00 | 30.75 | 1.47 |
1114 | 1150 | 4.137116 | AGGTGAACACGTGCATGTATAT | 57.863 | 40.909 | 17.22 | 0.34 | 30.75 | 0.86 |
1115 | 1151 | 3.871006 | AGGTGAACACGTGCATGTATATG | 59.129 | 43.478 | 17.22 | 1.67 | 37.36 | 1.78 |
1116 | 1152 | 3.868661 | GGTGAACACGTGCATGTATATGA | 59.131 | 43.478 | 17.22 | 0.00 | 36.36 | 2.15 |
1117 | 1153 | 4.025730 | GGTGAACACGTGCATGTATATGAG | 60.026 | 45.833 | 17.22 | 0.39 | 36.36 | 2.90 |
1118 | 1154 | 3.555547 | TGAACACGTGCATGTATATGAGC | 59.444 | 43.478 | 17.22 | 0.00 | 36.36 | 4.26 |
1120 | 1156 | 2.103094 | ACACGTGCATGTATATGAGCCT | 59.897 | 45.455 | 17.22 | 0.00 | 36.36 | 4.58 |
1122 | 1158 | 2.365293 | ACGTGCATGTATATGAGCCTGA | 59.635 | 45.455 | 10.57 | 0.00 | 36.36 | 3.86 |
1132 | 1168 | 7.066887 | CATGTATATGAGCCTGAGTAGGACTAG | 59.933 | 44.444 | 0.00 | 0.00 | 40.50 | 2.57 |
1146 | 1182 | 6.287525 | AGTAGGACTAGTGTTAGATACCGAC | 58.712 | 44.000 | 0.00 | 0.00 | 31.70 | 4.79 |
1149 | 1185 | 4.210955 | GGACTAGTGTTAGATACCGACTCG | 59.789 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1165 | 1204 | 3.620374 | CGACTCGGTTTGCTAGTACTAGA | 59.380 | 47.826 | 30.09 | 14.35 | 35.21 | 2.43 |
1166 | 1205 | 4.272991 | CGACTCGGTTTGCTAGTACTAGAT | 59.727 | 45.833 | 30.09 | 6.07 | 35.21 | 1.98 |
1167 | 1206 | 5.502153 | ACTCGGTTTGCTAGTACTAGATG | 57.498 | 43.478 | 30.09 | 13.48 | 35.21 | 2.90 |
1168 | 1207 | 4.338682 | ACTCGGTTTGCTAGTACTAGATGG | 59.661 | 45.833 | 30.09 | 13.62 | 35.21 | 3.51 |
1173 | 1212 | 3.595190 | TGCTAGTACTAGATGGGCTGA | 57.405 | 47.619 | 30.09 | 1.16 | 35.21 | 4.26 |
1174 | 1213 | 3.223435 | TGCTAGTACTAGATGGGCTGAC | 58.777 | 50.000 | 30.09 | 11.69 | 35.21 | 3.51 |
1205 | 1244 | 9.979897 | ATATATGTACGTATACCCCTGTAAAGA | 57.020 | 33.333 | 15.49 | 0.00 | 0.00 | 2.52 |
1231 | 1270 | 3.149196 | ACCGTGAGTTGATCAAAGCAAT | 58.851 | 40.909 | 10.35 | 0.00 | 40.43 | 3.56 |
1232 | 1271 | 4.323417 | ACCGTGAGTTGATCAAAGCAATA | 58.677 | 39.130 | 10.35 | 0.00 | 40.43 | 1.90 |
1233 | 1272 | 4.759693 | ACCGTGAGTTGATCAAAGCAATAA | 59.240 | 37.500 | 10.35 | 0.00 | 40.43 | 1.40 |
1234 | 1273 | 5.415701 | ACCGTGAGTTGATCAAAGCAATAAT | 59.584 | 36.000 | 10.35 | 0.00 | 40.43 | 1.28 |
1335 | 1374 | 5.610398 | TGCCACGTATGAATAGATGACATT | 58.390 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
1470 | 1509 | 2.687935 | ACCCCATGTTGATATGTTTCGC | 59.312 | 45.455 | 0.00 | 0.00 | 0.00 | 4.70 |
1474 | 1515 | 4.096231 | CCCATGTTGATATGTTTCGCTGAA | 59.904 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
1475 | 1516 | 5.392919 | CCCATGTTGATATGTTTCGCTGAAA | 60.393 | 40.000 | 0.00 | 0.55 | 0.00 | 2.69 |
1476 | 1517 | 6.267817 | CCATGTTGATATGTTTCGCTGAAAT | 58.732 | 36.000 | 6.93 | 0.00 | 33.97 | 2.17 |
1544 | 1590 | 5.652452 | CCATAGGGCTTAAACTAAAGTTGCT | 59.348 | 40.000 | 0.00 | 0.00 | 38.44 | 3.91 |
1792 | 1838 | 3.249799 | TCATGGCAACTTCAGTGTAAACG | 59.750 | 43.478 | 0.00 | 0.00 | 37.61 | 3.60 |
1833 | 1879 | 7.385267 | TGCAATAGACATGGCAACTTTTAATT | 58.615 | 30.769 | 0.00 | 0.00 | 38.19 | 1.40 |
1877 | 1924 | 9.479549 | AAACATATCAACATGGGATCTAGTTTT | 57.520 | 29.630 | 5.52 | 0.00 | 0.00 | 2.43 |
2005 | 2052 | 2.008328 | CATGCATGCGATGACGTGA | 58.992 | 52.632 | 14.93 | 0.00 | 41.98 | 4.35 |
2031 | 2078 | 8.301720 | ACAATCTGTTTACATTAGAGACGTGTA | 58.698 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2034 | 2081 | 8.552083 | TCTGTTTACATTAGAGACGTGTAGTA | 57.448 | 34.615 | 0.00 | 0.00 | 30.79 | 1.82 |
2145 | 2192 | 1.795872 | CTTCGTACGCATGTGTTTCCA | 59.204 | 47.619 | 18.51 | 0.00 | 0.00 | 3.53 |
2168 | 2215 | 1.276138 | TGGATCGATCAGCTGTTGTGT | 59.724 | 47.619 | 25.93 | 0.00 | 0.00 | 3.72 |
2172 | 2219 | 1.202521 | TCGATCAGCTGTTGTGTGTGT | 60.203 | 47.619 | 14.67 | 0.00 | 0.00 | 3.72 |
2192 | 2239 | 4.062293 | TGTGTTGTGTATCTACCAAGCAC | 58.938 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
2256 | 6067 | 4.380531 | TGCTAGCTTTGCACATAGGTATC | 58.619 | 43.478 | 17.23 | 0.00 | 35.31 | 2.24 |
2304 | 6115 | 1.529865 | GTCTCGGCGTAAAAGCAACTT | 59.470 | 47.619 | 6.85 | 0.00 | 39.27 | 2.66 |
2334 | 6145 | 1.942657 | GTCAGCAAGCTTTGTCTGTCA | 59.057 | 47.619 | 15.61 | 0.87 | 36.69 | 3.58 |
2354 | 6165 | 1.655046 | CGTCGTTCGTCGTTGGTCA | 60.655 | 57.895 | 4.05 | 0.00 | 40.80 | 4.02 |
2356 | 6167 | 0.706729 | GTCGTTCGTCGTTGGTCATC | 59.293 | 55.000 | 0.00 | 0.00 | 40.80 | 2.92 |
2357 | 6168 | 0.726787 | TCGTTCGTCGTTGGTCATCG | 60.727 | 55.000 | 0.00 | 0.00 | 40.80 | 3.84 |
2359 | 6170 | 1.735198 | TTCGTCGTTGGTCATCGCC | 60.735 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
2360 | 6171 | 3.541831 | CGTCGTTGGTCATCGCCG | 61.542 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
2361 | 6172 | 2.431942 | GTCGTTGGTCATCGCCGT | 60.432 | 61.111 | 0.00 | 0.00 | 0.00 | 5.68 |
2362 | 6173 | 2.126228 | TCGTTGGTCATCGCCGTC | 60.126 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
2363 | 6174 | 3.541831 | CGTTGGTCATCGCCGTCG | 61.542 | 66.667 | 0.00 | 0.00 | 0.00 | 5.12 |
2364 | 6175 | 2.431942 | GTTGGTCATCGCCGTCGT | 60.432 | 61.111 | 0.00 | 0.00 | 36.96 | 4.34 |
2365 | 6176 | 2.126228 | TTGGTCATCGCCGTCGTC | 60.126 | 61.111 | 0.00 | 0.00 | 36.96 | 4.20 |
2366 | 6177 | 3.957027 | TTGGTCATCGCCGTCGTCG | 62.957 | 63.158 | 0.00 | 0.00 | 36.96 | 5.12 |
2380 | 6192 | 1.068748 | GTCGTCGGAAAGTACTCAGCA | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 4.41 |
2386 | 6198 | 1.207329 | GGAAAGTACTCAGCATCGGGT | 59.793 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
2398 | 6210 | 0.179073 | CATCGGGTCTAGGCCAACAG | 60.179 | 60.000 | 16.93 | 3.34 | 0.00 | 3.16 |
2399 | 6211 | 1.972660 | ATCGGGTCTAGGCCAACAGC | 61.973 | 60.000 | 16.93 | 0.00 | 42.60 | 4.40 |
2430 | 6242 | 1.000496 | GTAGCGTATACTGGCCTGACC | 60.000 | 57.143 | 17.64 | 0.04 | 39.84 | 4.02 |
2431 | 6243 | 1.069258 | GCGTATACTGGCCTGACCC | 59.931 | 63.158 | 17.64 | 0.38 | 37.83 | 4.46 |
2512 | 6329 | 3.304794 | CCAGTTAATTTGCGGAAAACCGA | 60.305 | 43.478 | 6.08 | 0.00 | 34.88 | 4.69 |
2628 | 6465 | 3.005897 | ACATATGGGTCTCAGTATCGCAC | 59.994 | 47.826 | 7.80 | 0.00 | 0.00 | 5.34 |
2829 | 6668 | 2.496111 | CGCCGGATCTAGAGTTAGAGT | 58.504 | 52.381 | 5.05 | 0.00 | 39.21 | 3.24 |
2848 | 6687 | 2.173569 | AGTCACCCTTCTTGTGCTTCTT | 59.826 | 45.455 | 0.00 | 0.00 | 33.71 | 2.52 |
2872 | 6711 | 5.490357 | TCCTCAGAGATTTTTCCTCCAAGAT | 59.510 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
3073 | 6927 | 1.002990 | TCTCCACACATGCAGGCTG | 60.003 | 57.895 | 10.94 | 10.94 | 0.00 | 4.85 |
3302 | 7156 | 3.112263 | ACGAGGGGAGAAACATCCATAA | 58.888 | 45.455 | 0.00 | 0.00 | 41.52 | 1.90 |
3414 | 7268 | 4.021631 | CGCATGCCATAGCCGCAG | 62.022 | 66.667 | 13.15 | 0.00 | 40.15 | 5.18 |
3537 | 10475 | 0.666274 | TTCGCTGTCGACATCCACAC | 60.666 | 55.000 | 20.40 | 3.93 | 45.43 | 3.82 |
3564 | 10502 | 3.153919 | GCAACATTCCCAACAGAACCTA | 58.846 | 45.455 | 0.00 | 0.00 | 0.00 | 3.08 |
3846 | 10790 | 2.037847 | GGGCAACAATGGAGGCCT | 59.962 | 61.111 | 3.86 | 3.86 | 45.68 | 5.19 |
4010 | 10960 | 1.214367 | GACAACCACGTTCACGATGT | 58.786 | 50.000 | 6.30 | 5.58 | 43.02 | 3.06 |
4237 | 11192 | 1.268283 | GCCCCAGGAGTAGAAGCAGT | 61.268 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
4834 | 11790 | 3.008485 | CCTTCTCTCTTTTACAGTGGCCT | 59.992 | 47.826 | 3.32 | 0.00 | 0.00 | 5.19 |
4835 | 11791 | 3.685139 | TCTCTCTTTTACAGTGGCCTG | 57.315 | 47.619 | 3.32 | 0.00 | 44.68 | 4.85 |
4836 | 11792 | 3.239449 | TCTCTCTTTTACAGTGGCCTGA | 58.761 | 45.455 | 3.32 | 0.00 | 41.50 | 3.86 |
4837 | 11793 | 3.006967 | TCTCTCTTTTACAGTGGCCTGAC | 59.993 | 47.826 | 3.32 | 0.00 | 41.50 | 3.51 |
4962 | 11918 | 1.093159 | GCAGCTTCTGATCTTGGTGG | 58.907 | 55.000 | 0.00 | 0.00 | 32.44 | 4.61 |
5296 | 12372 | 1.375523 | GGAGCGGGTGACAATTCGT | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
5373 | 12449 | 3.057033 | CAGGGAGAAGGCAAATGTTTCAG | 60.057 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
5431 | 12507 | 5.505181 | ACCCTCACACTGACATTTATCTT | 57.495 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
5441 | 12517 | 7.119262 | ACACTGACATTTATCTTAAAGTTCCCG | 59.881 | 37.037 | 0.00 | 0.00 | 0.00 | 5.14 |
5791 | 12867 | 2.711547 | AGGAGCAGTTTACAAGGGAGTT | 59.288 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
5866 | 12943 | 1.620819 | GAGCAGGAGTTCAGGTCTGAA | 59.379 | 52.381 | 9.13 | 9.13 | 46.27 | 3.02 |
5892 | 12969 | 8.854614 | ATAAGTGTCATAGGCAGAATTTATCC | 57.145 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
5926 | 13003 | 3.777522 | TCAGAATTTGGGGGTTTTGTGTT | 59.222 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
5985 | 13101 | 0.392193 | AGCAATTCTCCTGTGCTCCG | 60.392 | 55.000 | 0.00 | 0.00 | 45.32 | 4.63 |
6235 | 13351 | 3.812053 | CAGAATGGGCTCTAAATCTTCCG | 59.188 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
6272 | 13388 | 0.314618 | TGTTTACAGCTACGGCGTGA | 59.685 | 50.000 | 24.86 | 5.90 | 44.37 | 4.35 |
6300 | 13416 | 1.982958 | TGAGTTAGTGAAGGGGGTTCC | 59.017 | 52.381 | 0.00 | 0.00 | 33.75 | 3.62 |
6318 | 13434 | 0.995024 | CCTCTTTCCAGATGGGTGGT | 59.005 | 55.000 | 0.00 | 0.00 | 38.88 | 4.16 |
6349 | 13465 | 0.613012 | AGGAGGTTGAAATGGCTGGC | 60.613 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6387 | 20109 | 9.349713 | TGAAATCCTTAAAGAAAAACTAGCAGA | 57.650 | 29.630 | 0.00 | 0.00 | 0.00 | 4.26 |
6397 | 20119 | 3.746045 | AAACTAGCAGACGAAGACCAA | 57.254 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
6433 | 20155 | 0.387929 | TTGTCGACCACAGACTGGAC | 59.612 | 55.000 | 14.12 | 4.75 | 43.95 | 4.02 |
6469 | 20855 | 6.159293 | CCATTCAGAAGCGATAGTAATGCTA | 58.841 | 40.000 | 0.44 | 0.00 | 38.17 | 3.49 |
6551 | 20937 | 4.056050 | GGTCGAAACTCTGCTTTCACTTA | 58.944 | 43.478 | 0.00 | 0.00 | 31.46 | 2.24 |
6662 | 21093 | 7.654923 | TGATGTGAGAATAATACTCTGTGATGC | 59.345 | 37.037 | 0.00 | 0.00 | 35.66 | 3.91 |
6701 | 21132 | 1.005215 | AGCCTTATCCCTGCCATATGC | 59.995 | 52.381 | 0.00 | 0.00 | 41.77 | 3.14 |
6724 | 21179 | 3.446161 | ACGACTCTCCGGATTTGTATCAA | 59.554 | 43.478 | 3.57 | 0.00 | 32.09 | 2.57 |
6733 | 21188 | 8.701895 | TCTCCGGATTTGTATCAATAACTAGTT | 58.298 | 33.333 | 13.68 | 13.68 | 32.09 | 2.24 |
6734 | 21189 | 9.326413 | CTCCGGATTTGTATCAATAACTAGTTT | 57.674 | 33.333 | 14.49 | 0.00 | 32.09 | 2.66 |
6735 | 21190 | 9.321562 | TCCGGATTTGTATCAATAACTAGTTTC | 57.678 | 33.333 | 14.49 | 0.22 | 32.09 | 2.78 |
6792 | 21247 | 9.277783 | CTGTTTGGATTCTTAGGTCCATATAAG | 57.722 | 37.037 | 7.80 | 0.00 | 43.61 | 1.73 |
6841 | 21301 | 4.704057 | AGAAATCTTTGATCCTGGTGAAGC | 59.296 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
6877 | 21337 | 9.906660 | AGCAAACAAAAATATACGAAATCTGAA | 57.093 | 25.926 | 0.00 | 0.00 | 0.00 | 3.02 |
6891 | 21351 | 8.641499 | ACGAAATCTGAAAGTAGAGATCATTC | 57.359 | 34.615 | 0.00 | 0.00 | 33.76 | 2.67 |
6892 | 21352 | 8.474025 | ACGAAATCTGAAAGTAGAGATCATTCT | 58.526 | 33.333 | 0.00 | 0.00 | 33.76 | 2.40 |
6893 | 21353 | 9.958234 | CGAAATCTGAAAGTAGAGATCATTCTA | 57.042 | 33.333 | 0.00 | 0.00 | 33.76 | 2.10 |
6898 | 21358 | 9.019656 | TCTGAAAGTAGAGATCATTCTATAGGC | 57.980 | 37.037 | 0.00 | 0.00 | 32.63 | 3.93 |
6899 | 21359 | 8.712228 | TGAAAGTAGAGATCATTCTATAGGCA | 57.288 | 34.615 | 0.00 | 0.00 | 32.63 | 4.75 |
6900 | 21360 | 8.801299 | TGAAAGTAGAGATCATTCTATAGGCAG | 58.199 | 37.037 | 0.00 | 0.00 | 32.63 | 4.85 |
6901 | 21361 | 8.719645 | AAAGTAGAGATCATTCTATAGGCAGT | 57.280 | 34.615 | 0.00 | 0.00 | 32.63 | 4.40 |
6902 | 21362 | 8.719645 | AAGTAGAGATCATTCTATAGGCAGTT | 57.280 | 34.615 | 0.00 | 0.00 | 32.63 | 3.16 |
6903 | 21363 | 8.719645 | AGTAGAGATCATTCTATAGGCAGTTT | 57.280 | 34.615 | 0.00 | 0.00 | 32.63 | 2.66 |
6904 | 21364 | 9.153479 | AGTAGAGATCATTCTATAGGCAGTTTT | 57.847 | 33.333 | 0.00 | 0.00 | 32.63 | 2.43 |
6905 | 21365 | 9.771534 | GTAGAGATCATTCTATAGGCAGTTTTT | 57.228 | 33.333 | 0.00 | 0.00 | 32.63 | 1.94 |
6934 | 21394 | 7.205297 | ACTTGATTTACCAATTATCATGCAGC | 58.795 | 34.615 | 0.00 | 0.00 | 30.70 | 5.25 |
6935 | 21395 | 6.088016 | TGATTTACCAATTATCATGCAGCC | 57.912 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
6936 | 21396 | 5.597594 | TGATTTACCAATTATCATGCAGCCA | 59.402 | 36.000 | 0.00 | 0.00 | 0.00 | 4.75 |
6937 | 21397 | 5.518848 | TTTACCAATTATCATGCAGCCAG | 57.481 | 39.130 | 0.00 | 0.00 | 0.00 | 4.85 |
6938 | 21398 | 1.684983 | ACCAATTATCATGCAGCCAGC | 59.315 | 47.619 | 0.00 | 0.00 | 45.96 | 4.85 |
6948 | 21408 | 3.483954 | GCAGCCAGCAGATTAAGGA | 57.516 | 52.632 | 0.00 | 0.00 | 44.79 | 3.36 |
6949 | 21409 | 1.755179 | GCAGCCAGCAGATTAAGGAA | 58.245 | 50.000 | 0.00 | 0.00 | 44.79 | 3.36 |
6950 | 21410 | 1.403323 | GCAGCCAGCAGATTAAGGAAC | 59.597 | 52.381 | 0.00 | 0.00 | 44.79 | 3.62 |
6951 | 21411 | 2.715046 | CAGCCAGCAGATTAAGGAACA | 58.285 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
6952 | 21412 | 3.285484 | CAGCCAGCAGATTAAGGAACAT | 58.715 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
6953 | 21413 | 4.454678 | CAGCCAGCAGATTAAGGAACATA | 58.545 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
6954 | 21414 | 4.883585 | CAGCCAGCAGATTAAGGAACATAA | 59.116 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
6955 | 21415 | 5.533903 | CAGCCAGCAGATTAAGGAACATAAT | 59.466 | 40.000 | 0.00 | 0.00 | 34.74 | 1.28 |
6956 | 21416 | 5.533903 | AGCCAGCAGATTAAGGAACATAATG | 59.466 | 40.000 | 0.00 | 0.00 | 32.01 | 1.90 |
6957 | 21417 | 5.300286 | GCCAGCAGATTAAGGAACATAATGT | 59.700 | 40.000 | 0.00 | 0.00 | 32.01 | 2.71 |
6958 | 21418 | 6.486657 | GCCAGCAGATTAAGGAACATAATGTA | 59.513 | 38.462 | 0.00 | 0.00 | 32.01 | 2.29 |
6959 | 21419 | 7.013274 | GCCAGCAGATTAAGGAACATAATGTAA | 59.987 | 37.037 | 0.00 | 0.00 | 32.01 | 2.41 |
6960 | 21420 | 9.071276 | CCAGCAGATTAAGGAACATAATGTAAT | 57.929 | 33.333 | 0.00 | 0.00 | 32.01 | 1.89 |
6962 | 21422 | 9.851686 | AGCAGATTAAGGAACATAATGTAATCA | 57.148 | 29.630 | 0.00 | 0.00 | 32.01 | 2.57 |
6995 | 21455 | 5.946298 | GATTCAACAGAATCAGCAATGACA | 58.054 | 37.500 | 12.05 | 0.00 | 44.46 | 3.58 |
6996 | 21456 | 5.366829 | TTCAACAGAATCAGCAATGACAG | 57.633 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
6997 | 21457 | 3.754850 | TCAACAGAATCAGCAATGACAGG | 59.245 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
6998 | 21458 | 3.708403 | ACAGAATCAGCAATGACAGGA | 57.292 | 42.857 | 0.00 | 0.00 | 0.00 | 3.86 |
6999 | 21459 | 4.025040 | ACAGAATCAGCAATGACAGGAA | 57.975 | 40.909 | 0.00 | 0.00 | 0.00 | 3.36 |
7000 | 21460 | 4.008330 | ACAGAATCAGCAATGACAGGAAG | 58.992 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
7001 | 21461 | 4.008330 | CAGAATCAGCAATGACAGGAAGT | 58.992 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
7002 | 21462 | 4.008330 | AGAATCAGCAATGACAGGAAGTG | 58.992 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
7003 | 21463 | 2.936919 | TCAGCAATGACAGGAAGTGT | 57.063 | 45.000 | 0.00 | 0.00 | 44.49 | 3.55 |
7004 | 21464 | 2.497138 | TCAGCAATGACAGGAAGTGTG | 58.503 | 47.619 | 0.00 | 0.00 | 40.56 | 3.82 |
7005 | 21465 | 2.104622 | TCAGCAATGACAGGAAGTGTGA | 59.895 | 45.455 | 0.00 | 0.00 | 40.56 | 3.58 |
7006 | 21466 | 2.880268 | CAGCAATGACAGGAAGTGTGAA | 59.120 | 45.455 | 0.00 | 0.00 | 40.56 | 3.18 |
7007 | 21467 | 3.316029 | CAGCAATGACAGGAAGTGTGAAA | 59.684 | 43.478 | 0.00 | 0.00 | 40.56 | 2.69 |
7008 | 21468 | 3.953612 | AGCAATGACAGGAAGTGTGAAAA | 59.046 | 39.130 | 0.00 | 0.00 | 40.56 | 2.29 |
7009 | 21469 | 4.044426 | GCAATGACAGGAAGTGTGAAAAC | 58.956 | 43.478 | 0.00 | 0.00 | 40.56 | 2.43 |
7010 | 21470 | 4.282068 | CAATGACAGGAAGTGTGAAAACG | 58.718 | 43.478 | 0.00 | 0.00 | 40.56 | 3.60 |
7011 | 21471 | 3.254470 | TGACAGGAAGTGTGAAAACGA | 57.746 | 42.857 | 0.00 | 0.00 | 40.56 | 3.85 |
7012 | 21472 | 3.804036 | TGACAGGAAGTGTGAAAACGAT | 58.196 | 40.909 | 0.00 | 0.00 | 40.56 | 3.73 |
7013 | 21473 | 3.807622 | TGACAGGAAGTGTGAAAACGATC | 59.192 | 43.478 | 0.00 | 0.00 | 40.56 | 3.69 |
7014 | 21474 | 3.804036 | ACAGGAAGTGTGAAAACGATCA | 58.196 | 40.909 | 0.00 | 0.00 | 38.28 | 2.92 |
7022 | 21482 | 3.169207 | GTGAAAACGATCACCAGTTCG | 57.831 | 47.619 | 8.79 | 0.00 | 43.11 | 3.95 |
7023 | 21483 | 1.529438 | TGAAAACGATCACCAGTTCGC | 59.471 | 47.619 | 0.00 | 0.00 | 39.86 | 4.70 |
7024 | 21484 | 0.872388 | AAAACGATCACCAGTTCGCC | 59.128 | 50.000 | 0.00 | 0.00 | 39.86 | 5.54 |
7025 | 21485 | 0.250124 | AAACGATCACCAGTTCGCCA | 60.250 | 50.000 | 0.00 | 0.00 | 39.86 | 5.69 |
7026 | 21486 | 0.670546 | AACGATCACCAGTTCGCCAG | 60.671 | 55.000 | 0.00 | 0.00 | 39.86 | 4.85 |
7027 | 21487 | 2.456119 | CGATCACCAGTTCGCCAGC | 61.456 | 63.158 | 0.00 | 0.00 | 31.13 | 4.85 |
7028 | 21488 | 2.434884 | ATCACCAGTTCGCCAGCG | 60.435 | 61.111 | 5.50 | 5.50 | 41.35 | 5.18 |
7034 | 21494 | 4.749310 | AGTTCGCCAGCGCAGGAG | 62.749 | 66.667 | 24.63 | 20.40 | 39.59 | 3.69 |
7211 | 21672 | 2.362717 | GACTAGTAGGGTCCATGTCAGC | 59.637 | 54.545 | 0.00 | 0.00 | 0.00 | 4.26 |
7231 | 21692 | 4.008539 | GCGAGAGGCAATACTTTTTGAG | 57.991 | 45.455 | 0.00 | 0.00 | 42.87 | 3.02 |
7232 | 21693 | 3.437049 | GCGAGAGGCAATACTTTTTGAGT | 59.563 | 43.478 | 0.00 | 0.00 | 42.87 | 3.41 |
7233 | 21694 | 4.670221 | GCGAGAGGCAATACTTTTTGAGTG | 60.670 | 45.833 | 0.00 | 0.00 | 42.87 | 3.51 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
11 | 12 | 2.822637 | ATGCTATGGGCCTGGACGG | 61.823 | 63.158 | 4.53 | 0.00 | 40.92 | 4.79 |
15 | 16 | 0.036448 | CTCTCATGCTATGGGCCTGG | 59.964 | 60.000 | 4.53 | 0.00 | 40.92 | 4.45 |
16 | 17 | 1.054231 | TCTCTCATGCTATGGGCCTG | 58.946 | 55.000 | 4.53 | 0.00 | 40.92 | 4.85 |
17 | 18 | 2.040012 | CAATCTCTCATGCTATGGGCCT | 59.960 | 50.000 | 4.53 | 0.00 | 40.92 | 5.19 |
18 | 19 | 2.434428 | CAATCTCTCATGCTATGGGCC | 58.566 | 52.381 | 0.00 | 0.00 | 40.92 | 5.80 |
19 | 20 | 1.811359 | GCAATCTCTCATGCTATGGGC | 59.189 | 52.381 | 0.00 | 0.00 | 39.46 | 5.36 |
20 | 21 | 3.136009 | TGCAATCTCTCATGCTATGGG | 57.864 | 47.619 | 0.00 | 0.00 | 42.97 | 4.00 |
21 | 22 | 5.509716 | TTTTGCAATCTCTCATGCTATGG | 57.490 | 39.130 | 0.00 | 0.00 | 42.97 | 2.74 |
22 | 23 | 6.074302 | GCATTTTTGCAATCTCTCATGCTATG | 60.074 | 38.462 | 0.00 | 0.00 | 42.97 | 2.23 |
23 | 24 | 5.983720 | GCATTTTTGCAATCTCTCATGCTAT | 59.016 | 36.000 | 0.00 | 0.00 | 42.97 | 2.97 |
24 | 25 | 5.126545 | AGCATTTTTGCAATCTCTCATGCTA | 59.873 | 36.000 | 18.34 | 0.00 | 43.30 | 3.49 |
25 | 26 | 4.081642 | AGCATTTTTGCAATCTCTCATGCT | 60.082 | 37.500 | 15.90 | 15.90 | 42.97 | 3.79 |
26 | 27 | 4.181578 | AGCATTTTTGCAATCTCTCATGC | 58.818 | 39.130 | 0.00 | 8.23 | 42.86 | 4.06 |
27 | 28 | 6.691818 | GTCTAGCATTTTTGCAATCTCTCATG | 59.308 | 38.462 | 0.00 | 0.00 | 37.25 | 3.07 |
28 | 29 | 6.376299 | TGTCTAGCATTTTTGCAATCTCTCAT | 59.624 | 34.615 | 0.00 | 0.00 | 37.25 | 2.90 |
29 | 30 | 5.706833 | TGTCTAGCATTTTTGCAATCTCTCA | 59.293 | 36.000 | 0.00 | 0.00 | 37.25 | 3.27 |
30 | 31 | 6.187125 | TGTCTAGCATTTTTGCAATCTCTC | 57.813 | 37.500 | 0.00 | 0.00 | 37.25 | 3.20 |
31 | 32 | 6.770746 | ATGTCTAGCATTTTTGCAATCTCT | 57.229 | 33.333 | 0.00 | 0.00 | 33.14 | 3.10 |
32 | 33 | 7.475015 | TGTATGTCTAGCATTTTTGCAATCTC | 58.525 | 34.615 | 0.00 | 0.00 | 38.94 | 2.75 |
33 | 34 | 7.395190 | TGTATGTCTAGCATTTTTGCAATCT | 57.605 | 32.000 | 0.00 | 0.00 | 38.94 | 2.40 |
34 | 35 | 8.464770 | TTTGTATGTCTAGCATTTTTGCAATC | 57.535 | 30.769 | 0.00 | 0.00 | 38.94 | 2.67 |
35 | 36 | 8.306038 | TCTTTGTATGTCTAGCATTTTTGCAAT | 58.694 | 29.630 | 0.00 | 0.00 | 38.94 | 3.56 |
36 | 37 | 7.594758 | GTCTTTGTATGTCTAGCATTTTTGCAA | 59.405 | 33.333 | 0.00 | 0.00 | 38.94 | 4.08 |
37 | 38 | 7.040478 | AGTCTTTGTATGTCTAGCATTTTTGCA | 60.040 | 33.333 | 5.22 | 0.00 | 38.94 | 4.08 |
38 | 39 | 7.308435 | AGTCTTTGTATGTCTAGCATTTTTGC | 58.692 | 34.615 | 5.22 | 0.00 | 38.94 | 3.68 |
41 | 42 | 9.502091 | TGTAAGTCTTTGTATGTCTAGCATTTT | 57.498 | 29.630 | 5.22 | 0.00 | 38.94 | 1.82 |
42 | 43 | 8.936864 | GTGTAAGTCTTTGTATGTCTAGCATTT | 58.063 | 33.333 | 5.22 | 0.00 | 38.94 | 2.32 |
43 | 44 | 8.094548 | TGTGTAAGTCTTTGTATGTCTAGCATT | 58.905 | 33.333 | 5.22 | 0.00 | 38.94 | 3.56 |
44 | 45 | 7.545965 | GTGTGTAAGTCTTTGTATGTCTAGCAT | 59.454 | 37.037 | 0.00 | 5.25 | 41.42 | 3.79 |
45 | 46 | 6.866770 | GTGTGTAAGTCTTTGTATGTCTAGCA | 59.133 | 38.462 | 0.00 | 0.00 | 0.00 | 3.49 |
46 | 47 | 7.091443 | AGTGTGTAAGTCTTTGTATGTCTAGC | 58.909 | 38.462 | 0.00 | 0.00 | 0.00 | 3.42 |
47 | 48 | 9.477484 | AAAGTGTGTAAGTCTTTGTATGTCTAG | 57.523 | 33.333 | 0.00 | 0.00 | 31.47 | 2.43 |
48 | 49 | 9.826574 | AAAAGTGTGTAAGTCTTTGTATGTCTA | 57.173 | 29.630 | 0.00 | 0.00 | 32.74 | 2.59 |
49 | 50 | 8.732746 | AAAAGTGTGTAAGTCTTTGTATGTCT | 57.267 | 30.769 | 0.00 | 0.00 | 32.74 | 3.41 |
50 | 51 | 9.859692 | GTAAAAGTGTGTAAGTCTTTGTATGTC | 57.140 | 33.333 | 0.00 | 0.00 | 32.74 | 3.06 |
51 | 52 | 9.386010 | TGTAAAAGTGTGTAAGTCTTTGTATGT | 57.614 | 29.630 | 0.00 | 0.00 | 32.74 | 2.29 |
52 | 53 | 9.646336 | GTGTAAAAGTGTGTAAGTCTTTGTATG | 57.354 | 33.333 | 0.00 | 0.00 | 32.74 | 2.39 |
53 | 54 | 8.545420 | CGTGTAAAAGTGTGTAAGTCTTTGTAT | 58.455 | 33.333 | 0.00 | 0.00 | 32.74 | 2.29 |
54 | 55 | 7.464444 | GCGTGTAAAAGTGTGTAAGTCTTTGTA | 60.464 | 37.037 | 0.00 | 0.00 | 32.74 | 2.41 |
55 | 56 | 6.673796 | GCGTGTAAAAGTGTGTAAGTCTTTGT | 60.674 | 38.462 | 0.00 | 0.00 | 32.74 | 2.83 |
56 | 57 | 5.675444 | GCGTGTAAAAGTGTGTAAGTCTTTG | 59.325 | 40.000 | 0.00 | 0.00 | 32.74 | 2.77 |
57 | 58 | 5.583457 | AGCGTGTAAAAGTGTGTAAGTCTTT | 59.417 | 36.000 | 0.00 | 0.00 | 33.61 | 2.52 |
58 | 59 | 5.114081 | AGCGTGTAAAAGTGTGTAAGTCTT | 58.886 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
59 | 60 | 4.690122 | AGCGTGTAAAAGTGTGTAAGTCT | 58.310 | 39.130 | 0.00 | 0.00 | 0.00 | 3.24 |
60 | 61 | 5.233689 | AGAAGCGTGTAAAAGTGTGTAAGTC | 59.766 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
61 | 62 | 5.114081 | AGAAGCGTGTAAAAGTGTGTAAGT | 58.886 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
62 | 63 | 5.652744 | AGAAGCGTGTAAAAGTGTGTAAG | 57.347 | 39.130 | 0.00 | 0.00 | 0.00 | 2.34 |
63 | 64 | 5.006941 | GGAAGAAGCGTGTAAAAGTGTGTAA | 59.993 | 40.000 | 0.00 | 0.00 | 0.00 | 2.41 |
64 | 65 | 4.508861 | GGAAGAAGCGTGTAAAAGTGTGTA | 59.491 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
65 | 66 | 3.311596 | GGAAGAAGCGTGTAAAAGTGTGT | 59.688 | 43.478 | 0.00 | 0.00 | 0.00 | 3.72 |
66 | 67 | 3.311322 | TGGAAGAAGCGTGTAAAAGTGTG | 59.689 | 43.478 | 0.00 | 0.00 | 0.00 | 3.82 |
67 | 68 | 3.537580 | TGGAAGAAGCGTGTAAAAGTGT | 58.462 | 40.909 | 0.00 | 0.00 | 0.00 | 3.55 |
68 | 69 | 4.452455 | AGATGGAAGAAGCGTGTAAAAGTG | 59.548 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
69 | 70 | 4.642429 | AGATGGAAGAAGCGTGTAAAAGT | 58.358 | 39.130 | 0.00 | 0.00 | 0.00 | 2.66 |
70 | 71 | 6.147164 | TGTTAGATGGAAGAAGCGTGTAAAAG | 59.853 | 38.462 | 0.00 | 0.00 | 0.00 | 2.27 |
71 | 72 | 5.992829 | TGTTAGATGGAAGAAGCGTGTAAAA | 59.007 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
72 | 73 | 5.543714 | TGTTAGATGGAAGAAGCGTGTAAA | 58.456 | 37.500 | 0.00 | 0.00 | 0.00 | 2.01 |
73 | 74 | 5.142061 | TGTTAGATGGAAGAAGCGTGTAA | 57.858 | 39.130 | 0.00 | 0.00 | 0.00 | 2.41 |
74 | 75 | 4.794278 | TGTTAGATGGAAGAAGCGTGTA | 57.206 | 40.909 | 0.00 | 0.00 | 0.00 | 2.90 |
75 | 76 | 3.678056 | TGTTAGATGGAAGAAGCGTGT | 57.322 | 42.857 | 0.00 | 0.00 | 0.00 | 4.49 |
76 | 77 | 3.125316 | GGTTGTTAGATGGAAGAAGCGTG | 59.875 | 47.826 | 0.00 | 0.00 | 0.00 | 5.34 |
77 | 78 | 3.244422 | TGGTTGTTAGATGGAAGAAGCGT | 60.244 | 43.478 | 0.00 | 0.00 | 33.95 | 5.07 |
78 | 79 | 3.334691 | TGGTTGTTAGATGGAAGAAGCG | 58.665 | 45.455 | 0.00 | 0.00 | 33.95 | 4.68 |
79 | 80 | 5.415701 | TGATTGGTTGTTAGATGGAAGAAGC | 59.584 | 40.000 | 0.00 | 0.00 | 32.39 | 3.86 |
80 | 81 | 6.127897 | GGTGATTGGTTGTTAGATGGAAGAAG | 60.128 | 42.308 | 0.00 | 0.00 | 0.00 | 2.85 |
81 | 82 | 5.710099 | GGTGATTGGTTGTTAGATGGAAGAA | 59.290 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
82 | 83 | 5.222027 | TGGTGATTGGTTGTTAGATGGAAGA | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 2.87 |
83 | 84 | 5.009631 | TGGTGATTGGTTGTTAGATGGAAG | 58.990 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
84 | 85 | 4.991776 | TGGTGATTGGTTGTTAGATGGAA | 58.008 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
85 | 86 | 4.649267 | TGGTGATTGGTTGTTAGATGGA | 57.351 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
86 | 87 | 4.082245 | GGTTGGTGATTGGTTGTTAGATGG | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
87 | 88 | 4.766891 | AGGTTGGTGATTGGTTGTTAGATG | 59.233 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
88 | 89 | 4.998051 | AGGTTGGTGATTGGTTGTTAGAT | 58.002 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
89 | 90 | 4.104102 | AGAGGTTGGTGATTGGTTGTTAGA | 59.896 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
90 | 91 | 4.398319 | AGAGGTTGGTGATTGGTTGTTAG | 58.602 | 43.478 | 0.00 | 0.00 | 0.00 | 2.34 |
91 | 92 | 4.394729 | GAGAGGTTGGTGATTGGTTGTTA | 58.605 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
92 | 93 | 3.222603 | GAGAGGTTGGTGATTGGTTGTT | 58.777 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
93 | 94 | 2.489073 | GGAGAGGTTGGTGATTGGTTGT | 60.489 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
94 | 95 | 2.162681 | GGAGAGGTTGGTGATTGGTTG | 58.837 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
95 | 96 | 1.075536 | GGGAGAGGTTGGTGATTGGTT | 59.924 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
96 | 97 | 0.698818 | GGGAGAGGTTGGTGATTGGT | 59.301 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
97 | 98 | 0.034089 | GGGGAGAGGTTGGTGATTGG | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
98 | 99 | 0.034089 | GGGGGAGAGGTTGGTGATTG | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 2.67 |
99 | 100 | 2.398919 | GGGGGAGAGGTTGGTGATT | 58.601 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
100 | 101 | 4.171186 | GGGGGAGAGGTTGGTGAT | 57.829 | 61.111 | 0.00 | 0.00 | 0.00 | 3.06 |
117 | 118 | 3.294214 | CCCATTCCTCTGAAAATCAGGG | 58.706 | 50.000 | 7.47 | 3.95 | 44.51 | 4.45 |
118 | 119 | 2.692041 | GCCCATTCCTCTGAAAATCAGG | 59.308 | 50.000 | 7.47 | 0.00 | 44.39 | 3.86 |
119 | 120 | 2.692041 | GGCCCATTCCTCTGAAAATCAG | 59.308 | 50.000 | 0.00 | 0.88 | 45.59 | 2.90 |
120 | 121 | 2.738743 | GGCCCATTCCTCTGAAAATCA | 58.261 | 47.619 | 0.00 | 0.00 | 33.32 | 2.57 |
121 | 122 | 1.678101 | CGGCCCATTCCTCTGAAAATC | 59.322 | 52.381 | 0.00 | 0.00 | 33.32 | 2.17 |
122 | 123 | 1.767759 | CGGCCCATTCCTCTGAAAAT | 58.232 | 50.000 | 0.00 | 0.00 | 33.32 | 1.82 |
123 | 124 | 0.965363 | GCGGCCCATTCCTCTGAAAA | 60.965 | 55.000 | 0.00 | 0.00 | 33.32 | 2.29 |
124 | 125 | 1.378514 | GCGGCCCATTCCTCTGAAA | 60.379 | 57.895 | 0.00 | 0.00 | 33.32 | 2.69 |
125 | 126 | 2.272146 | GCGGCCCATTCCTCTGAA | 59.728 | 61.111 | 0.00 | 0.00 | 34.33 | 3.02 |
126 | 127 | 3.797353 | GGCGGCCCATTCCTCTGA | 61.797 | 66.667 | 8.12 | 0.00 | 0.00 | 3.27 |
127 | 128 | 4.883354 | GGGCGGCCCATTCCTCTG | 62.883 | 72.222 | 32.90 | 0.00 | 44.65 | 3.35 |
138 | 139 | 3.537206 | AATAGATGAGCGGGGCGGC | 62.537 | 63.158 | 0.00 | 0.00 | 0.00 | 6.53 |
139 | 140 | 1.669115 | CAATAGATGAGCGGGGCGG | 60.669 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
140 | 141 | 0.946221 | GTCAATAGATGAGCGGGGCG | 60.946 | 60.000 | 0.00 | 0.00 | 39.19 | 6.13 |
141 | 142 | 0.603975 | GGTCAATAGATGAGCGGGGC | 60.604 | 60.000 | 0.00 | 0.00 | 45.70 | 5.80 |
142 | 143 | 3.614399 | GGTCAATAGATGAGCGGGG | 57.386 | 57.895 | 0.00 | 0.00 | 45.70 | 5.73 |
147 | 148 | 8.616076 | GTTAACCTTGATTGGTCAATAGATGAG | 58.384 | 37.037 | 0.00 | 0.00 | 43.08 | 2.90 |
148 | 149 | 7.556275 | GGTTAACCTTGATTGGTCAATAGATGA | 59.444 | 37.037 | 17.83 | 0.00 | 43.08 | 2.92 |
149 | 150 | 7.339212 | TGGTTAACCTTGATTGGTCAATAGATG | 59.661 | 37.037 | 24.78 | 0.00 | 43.08 | 2.90 |
150 | 151 | 7.410174 | TGGTTAACCTTGATTGGTCAATAGAT | 58.590 | 34.615 | 24.78 | 0.00 | 43.08 | 1.98 |
151 | 152 | 6.785076 | TGGTTAACCTTGATTGGTCAATAGA | 58.215 | 36.000 | 24.78 | 0.00 | 43.08 | 1.98 |
152 | 153 | 7.201821 | GGATGGTTAACCTTGATTGGTCAATAG | 60.202 | 40.741 | 24.78 | 0.00 | 43.08 | 1.73 |
153 | 154 | 6.605594 | GGATGGTTAACCTTGATTGGTCAATA | 59.394 | 38.462 | 24.78 | 0.07 | 43.08 | 1.90 |
154 | 155 | 5.422012 | GGATGGTTAACCTTGATTGGTCAAT | 59.578 | 40.000 | 24.78 | 5.84 | 43.08 | 2.57 |
155 | 156 | 4.770010 | GGATGGTTAACCTTGATTGGTCAA | 59.230 | 41.667 | 24.78 | 0.73 | 41.89 | 3.18 |
156 | 157 | 4.044065 | AGGATGGTTAACCTTGATTGGTCA | 59.956 | 41.667 | 24.78 | 1.27 | 39.83 | 4.02 |
157 | 158 | 4.399303 | CAGGATGGTTAACCTTGATTGGTC | 59.601 | 45.833 | 24.78 | 9.78 | 39.83 | 4.02 |
158 | 159 | 4.202673 | ACAGGATGGTTAACCTTGATTGGT | 60.203 | 41.667 | 24.78 | 11.57 | 43.62 | 3.67 |
159 | 160 | 4.344104 | ACAGGATGGTTAACCTTGATTGG | 58.656 | 43.478 | 24.78 | 11.00 | 43.62 | 3.16 |
160 | 161 | 7.461182 | TTTACAGGATGGTTAACCTTGATTG | 57.539 | 36.000 | 24.78 | 17.36 | 43.62 | 2.67 |
161 | 162 | 7.309805 | GCTTTTACAGGATGGTTAACCTTGATT | 60.310 | 37.037 | 24.78 | 8.08 | 43.62 | 2.57 |
162 | 163 | 6.152831 | GCTTTTACAGGATGGTTAACCTTGAT | 59.847 | 38.462 | 24.78 | 10.77 | 43.62 | 2.57 |
163 | 164 | 5.475564 | GCTTTTACAGGATGGTTAACCTTGA | 59.524 | 40.000 | 24.78 | 5.89 | 43.62 | 3.02 |
164 | 165 | 5.336451 | GGCTTTTACAGGATGGTTAACCTTG | 60.336 | 44.000 | 24.78 | 18.27 | 43.62 | 3.61 |
165 | 166 | 4.770531 | GGCTTTTACAGGATGGTTAACCTT | 59.229 | 41.667 | 24.78 | 18.87 | 43.62 | 3.50 |
166 | 167 | 4.044191 | AGGCTTTTACAGGATGGTTAACCT | 59.956 | 41.667 | 24.78 | 10.91 | 43.62 | 3.50 |
167 | 168 | 4.157840 | CAGGCTTTTACAGGATGGTTAACC | 59.842 | 45.833 | 18.27 | 18.27 | 43.62 | 2.85 |
168 | 169 | 4.765339 | ACAGGCTTTTACAGGATGGTTAAC | 59.235 | 41.667 | 0.00 | 0.00 | 43.62 | 2.01 |
169 | 170 | 4.993028 | ACAGGCTTTTACAGGATGGTTAA | 58.007 | 39.130 | 0.00 | 0.00 | 43.62 | 2.01 |
170 | 171 | 4.650972 | ACAGGCTTTTACAGGATGGTTA | 57.349 | 40.909 | 0.00 | 0.00 | 43.62 | 2.85 |
171 | 172 | 3.525800 | ACAGGCTTTTACAGGATGGTT | 57.474 | 42.857 | 0.00 | 0.00 | 43.62 | 3.67 |
172 | 173 | 4.650972 | TTACAGGCTTTTACAGGATGGT | 57.349 | 40.909 | 0.00 | 0.00 | 43.62 | 3.55 |
173 | 174 | 5.220854 | CGATTTACAGGCTTTTACAGGATGG | 60.221 | 44.000 | 0.00 | 0.00 | 43.62 | 3.51 |
174 | 175 | 5.354234 | ACGATTTACAGGCTTTTACAGGATG | 59.646 | 40.000 | 0.00 | 0.00 | 46.00 | 3.51 |
175 | 176 | 5.497474 | ACGATTTACAGGCTTTTACAGGAT | 58.503 | 37.500 | 0.00 | 0.00 | 0.00 | 3.24 |
176 | 177 | 4.901868 | ACGATTTACAGGCTTTTACAGGA | 58.098 | 39.130 | 0.00 | 0.00 | 0.00 | 3.86 |
177 | 178 | 5.622770 | AACGATTTACAGGCTTTTACAGG | 57.377 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
178 | 179 | 6.435428 | ACAAACGATTTACAGGCTTTTACAG | 58.565 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
179 | 180 | 6.380095 | ACAAACGATTTACAGGCTTTTACA | 57.620 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
180 | 181 | 7.771219 | GTACAAACGATTTACAGGCTTTTAC | 57.229 | 36.000 | 0.00 | 0.00 | 0.00 | 2.01 |
197 | 198 | 2.723618 | CGGCAATGCTACACGTACAAAC | 60.724 | 50.000 | 4.82 | 0.00 | 0.00 | 2.93 |
198 | 199 | 1.461512 | CGGCAATGCTACACGTACAAA | 59.538 | 47.619 | 4.82 | 0.00 | 0.00 | 2.83 |
199 | 200 | 1.072391 | CGGCAATGCTACACGTACAA | 58.928 | 50.000 | 4.82 | 0.00 | 0.00 | 2.41 |
200 | 201 | 0.738063 | CCGGCAATGCTACACGTACA | 60.738 | 55.000 | 4.82 | 0.00 | 0.00 | 2.90 |
201 | 202 | 0.458889 | TCCGGCAATGCTACACGTAC | 60.459 | 55.000 | 4.82 | 0.00 | 0.00 | 3.67 |
202 | 203 | 0.179121 | CTCCGGCAATGCTACACGTA | 60.179 | 55.000 | 4.82 | 0.00 | 0.00 | 3.57 |
203 | 204 | 1.447838 | CTCCGGCAATGCTACACGT | 60.448 | 57.895 | 4.82 | 0.00 | 0.00 | 4.49 |
204 | 205 | 1.148157 | CTCTCCGGCAATGCTACACG | 61.148 | 60.000 | 4.82 | 0.00 | 0.00 | 4.49 |
205 | 206 | 0.175760 | TCTCTCCGGCAATGCTACAC | 59.824 | 55.000 | 4.82 | 0.00 | 0.00 | 2.90 |
206 | 207 | 1.123077 | ATCTCTCCGGCAATGCTACA | 58.877 | 50.000 | 4.82 | 0.00 | 0.00 | 2.74 |
207 | 208 | 1.869767 | CAATCTCTCCGGCAATGCTAC | 59.130 | 52.381 | 4.82 | 0.00 | 0.00 | 3.58 |
208 | 209 | 1.762370 | TCAATCTCTCCGGCAATGCTA | 59.238 | 47.619 | 4.82 | 0.00 | 0.00 | 3.49 |
209 | 210 | 0.543277 | TCAATCTCTCCGGCAATGCT | 59.457 | 50.000 | 4.82 | 0.00 | 0.00 | 3.79 |
210 | 211 | 0.942962 | CTCAATCTCTCCGGCAATGC | 59.057 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
211 | 212 | 2.322355 | ACTCAATCTCTCCGGCAATG | 57.678 | 50.000 | 0.00 | 0.00 | 0.00 | 2.82 |
212 | 213 | 2.766263 | TGTACTCAATCTCTCCGGCAAT | 59.234 | 45.455 | 0.00 | 0.00 | 0.00 | 3.56 |
213 | 214 | 2.176045 | TGTACTCAATCTCTCCGGCAA | 58.824 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
214 | 215 | 1.847328 | TGTACTCAATCTCTCCGGCA | 58.153 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
215 | 216 | 2.748605 | CATGTACTCAATCTCTCCGGC | 58.251 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
216 | 217 | 2.363680 | AGCATGTACTCAATCTCTCCGG | 59.636 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
217 | 218 | 3.724508 | AGCATGTACTCAATCTCTCCG | 57.275 | 47.619 | 0.00 | 0.00 | 0.00 | 4.63 |
218 | 219 | 5.782893 | AGTAGCATGTACTCAATCTCTCC | 57.217 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
219 | 220 | 7.265647 | TGTAGTAGCATGTACTCAATCTCTC | 57.734 | 40.000 | 10.12 | 0.00 | 0.00 | 3.20 |
220 | 221 | 7.270757 | CTGTAGTAGCATGTACTCAATCTCT | 57.729 | 40.000 | 10.12 | 0.00 | 0.00 | 3.10 |
252 | 253 | 1.279840 | GGCTCACGTGTCAAGTTGC | 59.720 | 57.895 | 16.51 | 9.23 | 0.00 | 4.17 |
255 | 256 | 0.532862 | CCTTGGCTCACGTGTCAAGT | 60.533 | 55.000 | 28.36 | 0.00 | 35.98 | 3.16 |
333 | 335 | 3.912496 | TTCAGTGCTACAGCCATGTAT | 57.088 | 42.857 | 0.00 | 0.00 | 41.05 | 2.29 |
363 | 366 | 6.590677 | GTCATCTGGTTCTAACTTGTAGTTCC | 59.409 | 42.308 | 0.00 | 0.00 | 39.51 | 3.62 |
385 | 388 | 3.017771 | ATCGCCATGGCAGTCGTCA | 62.018 | 57.895 | 34.93 | 12.48 | 42.06 | 4.35 |
423 | 426 | 3.935203 | GAGATGTATGTGGTGAAGGTGTG | 59.065 | 47.826 | 0.00 | 0.00 | 0.00 | 3.82 |
439 | 442 | 2.533916 | TCAGCAGAAGGAGTGAGATGT | 58.466 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
455 | 458 | 1.202580 | AGAGCAACGGGTATCATCAGC | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
459 | 462 | 3.967886 | CGAGAGCAACGGGTATCAT | 57.032 | 52.632 | 0.00 | 0.00 | 32.46 | 2.45 |
1035 | 1071 | 1.138661 | ACGTCGGGTTTACTTCCAACA | 59.861 | 47.619 | 0.00 | 0.00 | 0.00 | 3.33 |
1036 | 1072 | 1.869774 | ACGTCGGGTTTACTTCCAAC | 58.130 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
1037 | 1073 | 2.627699 | ACTACGTCGGGTTTACTTCCAA | 59.372 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
1038 | 1074 | 2.228822 | GACTACGTCGGGTTTACTTCCA | 59.771 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1039 | 1075 | 2.868662 | GACTACGTCGGGTTTACTTCC | 58.131 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
1051 | 1087 | 3.899416 | GCATACGGCGACTACGTC | 58.101 | 61.111 | 16.62 | 0.00 | 44.37 | 4.34 |
1063 | 1099 | 2.790468 | GCTCCGTATACGATCCGCATAC | 60.790 | 54.545 | 26.37 | 1.96 | 43.02 | 2.39 |
1064 | 1100 | 1.399440 | GCTCCGTATACGATCCGCATA | 59.601 | 52.381 | 26.37 | 1.02 | 43.02 | 3.14 |
1065 | 1101 | 0.170561 | GCTCCGTATACGATCCGCAT | 59.829 | 55.000 | 26.37 | 0.00 | 43.02 | 4.73 |
1066 | 1102 | 1.167781 | TGCTCCGTATACGATCCGCA | 61.168 | 55.000 | 26.37 | 22.04 | 43.02 | 5.69 |
1067 | 1103 | 0.039798 | TTGCTCCGTATACGATCCGC | 60.040 | 55.000 | 26.37 | 20.04 | 43.02 | 5.54 |
1068 | 1104 | 2.095415 | TGATTGCTCCGTATACGATCCG | 60.095 | 50.000 | 26.37 | 9.73 | 43.02 | 4.18 |
1069 | 1105 | 3.243336 | GTGATTGCTCCGTATACGATCC | 58.757 | 50.000 | 26.37 | 13.27 | 43.02 | 3.36 |
1070 | 1106 | 3.057456 | AGGTGATTGCTCCGTATACGATC | 60.057 | 47.826 | 26.37 | 19.17 | 43.02 | 3.69 |
1071 | 1107 | 2.891580 | AGGTGATTGCTCCGTATACGAT | 59.108 | 45.455 | 26.37 | 11.29 | 43.02 | 3.73 |
1072 | 1108 | 2.304092 | AGGTGATTGCTCCGTATACGA | 58.696 | 47.619 | 26.37 | 11.41 | 43.02 | 3.43 |
1073 | 1109 | 2.795175 | AGGTGATTGCTCCGTATACG | 57.205 | 50.000 | 18.40 | 18.40 | 39.44 | 3.06 |
1074 | 1110 | 3.573110 | ACCTAGGTGATTGCTCCGTATAC | 59.427 | 47.826 | 15.42 | 0.00 | 32.93 | 1.47 |
1075 | 1111 | 3.840991 | ACCTAGGTGATTGCTCCGTATA | 58.159 | 45.455 | 15.42 | 0.00 | 32.93 | 1.47 |
1076 | 1112 | 2.679082 | ACCTAGGTGATTGCTCCGTAT | 58.321 | 47.619 | 15.42 | 0.00 | 32.93 | 3.06 |
1077 | 1113 | 2.154567 | ACCTAGGTGATTGCTCCGTA | 57.845 | 50.000 | 15.42 | 0.00 | 32.93 | 4.02 |
1078 | 1114 | 2.992476 | ACCTAGGTGATTGCTCCGT | 58.008 | 52.632 | 15.42 | 0.00 | 32.93 | 4.69 |
1088 | 1124 | 0.249699 | TGCACGTGTTCACCTAGGTG | 60.250 | 55.000 | 32.61 | 32.61 | 46.64 | 4.00 |
1089 | 1125 | 0.685097 | ATGCACGTGTTCACCTAGGT | 59.315 | 50.000 | 18.38 | 9.21 | 0.00 | 3.08 |
1090 | 1126 | 1.078709 | CATGCACGTGTTCACCTAGG | 58.921 | 55.000 | 18.38 | 7.41 | 0.00 | 3.02 |
1091 | 1127 | 1.795768 | ACATGCACGTGTTCACCTAG | 58.204 | 50.000 | 18.38 | 1.76 | 0.00 | 3.02 |
1092 | 1128 | 3.603158 | ATACATGCACGTGTTCACCTA | 57.397 | 42.857 | 18.38 | 1.34 | 33.62 | 3.08 |
1093 | 1129 | 2.472695 | ATACATGCACGTGTTCACCT | 57.527 | 45.000 | 18.38 | 0.00 | 33.62 | 4.00 |
1094 | 1130 | 3.868661 | TCATATACATGCACGTGTTCACC | 59.131 | 43.478 | 18.38 | 0.00 | 33.62 | 4.02 |
1095 | 1131 | 4.550831 | GCTCATATACATGCACGTGTTCAC | 60.551 | 45.833 | 18.38 | 0.09 | 33.62 | 3.18 |
1096 | 1132 | 3.555547 | GCTCATATACATGCACGTGTTCA | 59.444 | 43.478 | 18.38 | 7.94 | 33.62 | 3.18 |
1097 | 1133 | 3.059597 | GGCTCATATACATGCACGTGTTC | 60.060 | 47.826 | 18.38 | 1.32 | 33.62 | 3.18 |
1098 | 1134 | 2.872245 | GGCTCATATACATGCACGTGTT | 59.128 | 45.455 | 18.38 | 2.00 | 33.62 | 3.32 |
1099 | 1135 | 2.103094 | AGGCTCATATACATGCACGTGT | 59.897 | 45.455 | 18.38 | 0.00 | 36.13 | 4.49 |
1100 | 1136 | 2.477754 | CAGGCTCATATACATGCACGTG | 59.522 | 50.000 | 12.28 | 12.28 | 31.73 | 4.49 |
1101 | 1137 | 2.365293 | TCAGGCTCATATACATGCACGT | 59.635 | 45.455 | 0.00 | 0.00 | 31.73 | 4.49 |
1102 | 1138 | 2.991866 | CTCAGGCTCATATACATGCACG | 59.008 | 50.000 | 0.00 | 0.00 | 31.73 | 5.34 |
1103 | 1139 | 4.000331 | ACTCAGGCTCATATACATGCAC | 58.000 | 45.455 | 0.00 | 0.00 | 31.73 | 4.57 |
1104 | 1140 | 4.221482 | CCTACTCAGGCTCATATACATGCA | 59.779 | 45.833 | 0.00 | 0.00 | 34.35 | 3.96 |
1105 | 1141 | 4.464244 | TCCTACTCAGGCTCATATACATGC | 59.536 | 45.833 | 0.00 | 0.00 | 42.30 | 4.06 |
1106 | 1142 | 5.714333 | AGTCCTACTCAGGCTCATATACATG | 59.286 | 44.000 | 0.00 | 0.00 | 42.30 | 3.21 |
1107 | 1143 | 5.898120 | AGTCCTACTCAGGCTCATATACAT | 58.102 | 41.667 | 0.00 | 0.00 | 42.30 | 2.29 |
1108 | 1144 | 5.326283 | AGTCCTACTCAGGCTCATATACA | 57.674 | 43.478 | 0.00 | 0.00 | 42.30 | 2.29 |
1109 | 1145 | 6.373216 | CACTAGTCCTACTCAGGCTCATATAC | 59.627 | 46.154 | 0.00 | 0.00 | 42.30 | 1.47 |
1110 | 1146 | 6.044520 | ACACTAGTCCTACTCAGGCTCATATA | 59.955 | 42.308 | 0.00 | 0.00 | 42.30 | 0.86 |
1111 | 1147 | 5.163034 | ACACTAGTCCTACTCAGGCTCATAT | 60.163 | 44.000 | 0.00 | 0.00 | 42.30 | 1.78 |
1112 | 1148 | 4.166337 | ACACTAGTCCTACTCAGGCTCATA | 59.834 | 45.833 | 0.00 | 0.00 | 42.30 | 2.15 |
1113 | 1149 | 3.053245 | ACACTAGTCCTACTCAGGCTCAT | 60.053 | 47.826 | 0.00 | 0.00 | 42.30 | 2.90 |
1114 | 1150 | 2.309162 | ACACTAGTCCTACTCAGGCTCA | 59.691 | 50.000 | 0.00 | 0.00 | 42.30 | 4.26 |
1115 | 1151 | 3.007473 | ACACTAGTCCTACTCAGGCTC | 57.993 | 52.381 | 0.00 | 0.00 | 42.30 | 4.70 |
1116 | 1152 | 3.459710 | AACACTAGTCCTACTCAGGCT | 57.540 | 47.619 | 0.00 | 0.00 | 42.30 | 4.58 |
1117 | 1153 | 4.525024 | TCTAACACTAGTCCTACTCAGGC | 58.475 | 47.826 | 0.00 | 0.00 | 42.30 | 4.85 |
1118 | 1154 | 6.711645 | GGTATCTAACACTAGTCCTACTCAGG | 59.288 | 46.154 | 0.00 | 0.00 | 44.17 | 3.86 |
1120 | 1156 | 6.098838 | TCGGTATCTAACACTAGTCCTACTCA | 59.901 | 42.308 | 0.00 | 0.00 | 0.00 | 3.41 |
1122 | 1158 | 6.099557 | AGTCGGTATCTAACACTAGTCCTACT | 59.900 | 42.308 | 0.00 | 0.00 | 0.00 | 2.57 |
1139 | 1175 | 9.728025 | TCTAGTACTAGCAAACCGAGTCGGTAT | 62.728 | 44.444 | 36.02 | 22.71 | 44.95 | 2.73 |
1140 | 1176 | 8.520199 | TCTAGTACTAGCAAACCGAGTCGGTA | 62.520 | 46.154 | 36.02 | 19.83 | 44.95 | 4.02 |
1141 | 1177 | 7.820331 | TCTAGTACTAGCAAACCGAGTCGGT | 62.820 | 48.000 | 31.35 | 31.35 | 46.29 | 4.69 |
1146 | 1182 | 4.261656 | CCCATCTAGTACTAGCAAACCGAG | 60.262 | 50.000 | 22.87 | 1.26 | 33.32 | 4.63 |
1149 | 1185 | 3.388350 | AGCCCATCTAGTACTAGCAAACC | 59.612 | 47.826 | 22.87 | 11.81 | 33.32 | 3.27 |
1182 | 1221 | 8.579006 | CAATCTTTACAGGGGTATACGTACATA | 58.421 | 37.037 | 0.00 | 0.00 | 32.25 | 2.29 |
1184 | 1223 | 6.380846 | ACAATCTTTACAGGGGTATACGTACA | 59.619 | 38.462 | 0.00 | 0.00 | 32.25 | 2.90 |
1186 | 1225 | 7.014230 | GGTACAATCTTTACAGGGGTATACGTA | 59.986 | 40.741 | 0.00 | 0.00 | 0.00 | 3.57 |
1188 | 1227 | 6.218746 | GGTACAATCTTTACAGGGGTATACG | 58.781 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1189 | 1228 | 6.183360 | ACGGTACAATCTTTACAGGGGTATAC | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 1.47 |
1190 | 1229 | 5.898972 | ACGGTACAATCTTTACAGGGGTATA | 59.101 | 40.000 | 0.00 | 0.00 | 0.00 | 1.47 |
1191 | 1230 | 4.718276 | ACGGTACAATCTTTACAGGGGTAT | 59.282 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
1192 | 1231 | 4.081531 | CACGGTACAATCTTTACAGGGGTA | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
1193 | 1232 | 2.908351 | ACGGTACAATCTTTACAGGGGT | 59.092 | 45.455 | 0.00 | 0.00 | 0.00 | 4.95 |
1194 | 1233 | 3.055675 | TCACGGTACAATCTTTACAGGGG | 60.056 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
1195 | 1234 | 4.181578 | CTCACGGTACAATCTTTACAGGG | 58.818 | 47.826 | 0.00 | 0.00 | 0.00 | 4.45 |
1196 | 1235 | 4.817517 | ACTCACGGTACAATCTTTACAGG | 58.182 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
1197 | 1236 | 5.924254 | TCAACTCACGGTACAATCTTTACAG | 59.076 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1204 | 1243 | 5.671329 | GCTTTGATCAACTCACGGTACAATC | 60.671 | 44.000 | 7.89 | 0.00 | 32.17 | 2.67 |
1205 | 1244 | 4.154195 | GCTTTGATCAACTCACGGTACAAT | 59.846 | 41.667 | 7.89 | 0.00 | 32.17 | 2.71 |
1232 | 1271 | 9.706846 | GCGTTAACATTTCCGTACTTTTATATT | 57.293 | 29.630 | 6.39 | 0.00 | 0.00 | 1.28 |
1233 | 1272 | 8.337532 | GGCGTTAACATTTCCGTACTTTTATAT | 58.662 | 33.333 | 6.39 | 0.00 | 0.00 | 0.86 |
1234 | 1273 | 7.201600 | GGGCGTTAACATTTCCGTACTTTTATA | 60.202 | 37.037 | 6.39 | 0.00 | 0.00 | 0.98 |
1544 | 1590 | 9.237187 | TGATCTACAAACTAAAATTGCCACATA | 57.763 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
1792 | 1838 | 6.805271 | GTCTATTGCATATGAATTGCCATGAC | 59.195 | 38.462 | 6.97 | 0.00 | 39.39 | 3.06 |
2005 | 2052 | 7.152645 | ACACGTCTCTAATGTAAACAGATTGT | 58.847 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
2031 | 2078 | 0.971447 | GGCAGGAAGGGAGACGTACT | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2034 | 2081 | 2.203788 | TGGCAGGAAGGGAGACGT | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 4.34 |
2168 | 2215 | 4.062293 | GCTTGGTAGATACACAACACACA | 58.938 | 43.478 | 0.00 | 0.00 | 0.00 | 3.72 |
2172 | 2219 | 4.344359 | TGTGCTTGGTAGATACACAACA | 57.656 | 40.909 | 0.00 | 0.00 | 38.24 | 3.33 |
2225 | 6034 | 1.334869 | GCAAAGCTAGCACACACAACT | 59.665 | 47.619 | 18.83 | 0.00 | 0.00 | 3.16 |
2256 | 6067 | 1.079503 | GTACAAAGCTGGCTTCCTCG | 58.920 | 55.000 | 8.33 | 1.30 | 34.84 | 4.63 |
2304 | 6115 | 1.081175 | CTTGCTGACGAGCTCGACA | 60.081 | 57.895 | 40.58 | 36.28 | 46.39 | 4.35 |
2326 | 6137 | 0.589708 | ACGAACGACGATGACAGACA | 59.410 | 50.000 | 0.00 | 0.00 | 45.77 | 3.41 |
2334 | 6145 | 0.727122 | GACCAACGACGAACGACGAT | 60.727 | 55.000 | 22.29 | 10.44 | 45.77 | 3.73 |
2359 | 6170 | 1.879646 | CTGAGTACTTTCCGACGACG | 58.120 | 55.000 | 0.00 | 0.00 | 39.43 | 5.12 |
2360 | 6171 | 1.068748 | TGCTGAGTACTTTCCGACGAC | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
2361 | 6172 | 1.241165 | TGCTGAGTACTTTCCGACGA | 58.759 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2362 | 6173 | 2.186076 | GATGCTGAGTACTTTCCGACG | 58.814 | 52.381 | 0.00 | 0.00 | 0.00 | 5.12 |
2363 | 6174 | 2.186076 | CGATGCTGAGTACTTTCCGAC | 58.814 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
2364 | 6175 | 1.134367 | CCGATGCTGAGTACTTTCCGA | 59.866 | 52.381 | 0.00 | 0.00 | 0.00 | 4.55 |
2365 | 6176 | 1.560923 | CCGATGCTGAGTACTTTCCG | 58.439 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2366 | 6177 | 1.207329 | ACCCGATGCTGAGTACTTTCC | 59.793 | 52.381 | 0.00 | 0.00 | 0.00 | 3.13 |
2367 | 6178 | 2.166664 | AGACCCGATGCTGAGTACTTTC | 59.833 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
2377 | 6189 | 1.689233 | TTGGCCTAGACCCGATGCT | 60.689 | 57.895 | 3.32 | 0.00 | 0.00 | 3.79 |
2380 | 6192 | 1.972660 | GCTGTTGGCCTAGACCCGAT | 61.973 | 60.000 | 3.32 | 0.00 | 34.27 | 4.18 |
2401 | 6213 | 4.378978 | GCCAGTATACGCTACTGATCTCAG | 60.379 | 50.000 | 21.27 | 5.66 | 45.69 | 3.35 |
2402 | 6214 | 3.502595 | GCCAGTATACGCTACTGATCTCA | 59.497 | 47.826 | 21.27 | 0.00 | 45.69 | 3.27 |
2446 | 6258 | 1.048601 | AGACGAGGCAAAACTCTCCA | 58.951 | 50.000 | 0.00 | 0.00 | 35.33 | 3.86 |
2512 | 6329 | 1.178276 | TGGTTGTGACGGTTTTTGCT | 58.822 | 45.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2628 | 6465 | 7.380602 | AGCGAGTTGATTGATTTTCTTTTCTTG | 59.619 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
2804 | 6643 | 2.123425 | TCTAGATCCGGCGCCCTT | 60.123 | 61.111 | 23.46 | 5.30 | 0.00 | 3.95 |
2829 | 6668 | 2.487265 | GGAAGAAGCACAAGAAGGGTGA | 60.487 | 50.000 | 0.00 | 0.00 | 38.54 | 4.02 |
2848 | 6687 | 4.846367 | TCTTGGAGGAAAAATCTCTGAGGA | 59.154 | 41.667 | 4.59 | 0.00 | 0.00 | 3.71 |
2872 | 6711 | 0.617935 | TGGGAAGACGATTGGATGCA | 59.382 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
3073 | 6927 | 2.674220 | CCCTCTCCACCTCCCTTGC | 61.674 | 68.421 | 0.00 | 0.00 | 0.00 | 4.01 |
3302 | 7156 | 0.254178 | ATGGACGAGAAGCATGCCTT | 59.746 | 50.000 | 15.66 | 8.13 | 36.19 | 4.35 |
3406 | 7260 | 4.152964 | CTGAGGCTGCTGCGGCTA | 62.153 | 66.667 | 30.31 | 17.02 | 40.21 | 3.93 |
3414 | 7268 | 3.210528 | GGAGCATGCTGAGGCTGC | 61.211 | 66.667 | 28.27 | 8.49 | 39.98 | 5.25 |
3537 | 10475 | 0.318120 | GTTGGGAATGTTGCTGGTGG | 59.682 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3564 | 10502 | 1.744368 | CGCTTGAGATGCCAGCTGT | 60.744 | 57.895 | 13.81 | 0.00 | 0.00 | 4.40 |
3846 | 10790 | 3.120979 | CTCCGCATCGACGCACCTA | 62.121 | 63.158 | 3.68 | 0.00 | 0.00 | 3.08 |
4237 | 11192 | 2.577059 | GTGGGGTGAGCGATTCGA | 59.423 | 61.111 | 10.88 | 0.00 | 0.00 | 3.71 |
4834 | 11790 | 2.824880 | CGGGGTGGTGAAAGGGTCA | 61.825 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
4835 | 11791 | 2.033602 | CGGGGTGGTGAAAGGGTC | 59.966 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
4836 | 11792 | 4.280019 | GCGGGGTGGTGAAAGGGT | 62.280 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
4837 | 11793 | 3.507377 | AAGCGGGGTGGTGAAAGGG | 62.507 | 63.158 | 0.00 | 0.00 | 0.00 | 3.95 |
4924 | 11880 | 4.507388 | GCTGCAAATTTGAAGTTGTTGCTA | 59.493 | 37.500 | 24.22 | 0.00 | 43.85 | 3.49 |
4928 | 11884 | 5.292589 | CAGAAGCTGCAAATTTGAAGTTGTT | 59.707 | 36.000 | 24.22 | 16.16 | 36.17 | 2.83 |
4962 | 11918 | 6.758886 | CAGAGTCAACCTCCTCATAACATTAC | 59.241 | 42.308 | 0.00 | 0.00 | 41.47 | 1.89 |
5296 | 12372 | 4.340666 | TCCAAGCACAAATCTTTGCAGTTA | 59.659 | 37.500 | 2.63 | 0.00 | 41.79 | 2.24 |
5373 | 12449 | 6.490566 | TGCCGTTAAAAAGATAGACCTTTC | 57.509 | 37.500 | 0.00 | 0.00 | 35.50 | 2.62 |
5431 | 12507 | 0.474273 | ACACTCCCCCGGGAACTTTA | 60.474 | 55.000 | 26.32 | 0.00 | 44.66 | 1.85 |
5441 | 12517 | 0.320508 | GACGAAGACAACACTCCCCC | 60.321 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 |
5791 | 12867 | 3.181486 | CGACCTTCCTTTCATCATCGAGA | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 4.04 |
5866 | 12943 | 9.289782 | GGATAAATTCTGCCTATGACACTTATT | 57.710 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
5892 | 12969 | 5.468072 | CCCCAAATTCTGACGAGATTCATAG | 59.532 | 44.000 | 0.00 | 0.00 | 0.00 | 2.23 |
5926 | 13003 | 0.776810 | TGGCCAAGGAACCATTCTCA | 59.223 | 50.000 | 0.61 | 0.00 | 0.00 | 3.27 |
5985 | 13101 | 2.159179 | ATTGTACCTTTGGCCCCATC | 57.841 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6160 | 13276 | 1.780860 | GACAACATTTGTGCGCTTGAC | 59.219 | 47.619 | 9.73 | 0.00 | 45.52 | 3.18 |
6235 | 13351 | 2.851195 | ACATCGGCCTTACCATTGATC | 58.149 | 47.619 | 0.00 | 0.00 | 39.03 | 2.92 |
6272 | 13388 | 4.566488 | CCCCTTCACTAACTCAAGAAGCAT | 60.566 | 45.833 | 0.00 | 0.00 | 36.91 | 3.79 |
6300 | 13416 | 2.040278 | TCAACCACCCATCTGGAAAGAG | 59.960 | 50.000 | 0.00 | 0.00 | 37.39 | 2.85 |
6318 | 13434 | 2.364317 | CCTCCTCCTCGCCCTCAA | 60.364 | 66.667 | 0.00 | 0.00 | 0.00 | 3.02 |
6387 | 20109 | 2.359900 | GAAGCCATGATTGGTCTTCGT | 58.640 | 47.619 | 0.00 | 0.00 | 45.57 | 3.85 |
6397 | 20119 | 3.350833 | GACAAACTCCAGAAGCCATGAT | 58.649 | 45.455 | 0.00 | 0.00 | 0.00 | 2.45 |
6433 | 20155 | 4.437930 | GCTTCTGAATGGTTGAATTCTCCG | 60.438 | 45.833 | 7.05 | 0.00 | 37.44 | 4.63 |
6469 | 20855 | 6.947644 | TGCACACATGATATTGCTATCTTT | 57.052 | 33.333 | 0.00 | 0.00 | 35.69 | 2.52 |
6634 | 21065 | 8.525290 | TCACAGAGTATTATTCTCACATCAGA | 57.475 | 34.615 | 1.91 | 0.00 | 34.73 | 3.27 |
6701 | 21132 | 2.933495 | TACAAATCCGGAGAGTCGTG | 57.067 | 50.000 | 11.34 | 3.84 | 0.00 | 4.35 |
6760 | 21215 | 7.166167 | GGACCTAAGAATCCAAACAGTAAGAA | 58.834 | 38.462 | 0.00 | 0.00 | 34.87 | 2.52 |
6762 | 21217 | 6.472887 | TGGACCTAAGAATCCAAACAGTAAG | 58.527 | 40.000 | 0.00 | 0.00 | 42.14 | 2.34 |
6765 | 21220 | 4.993705 | TGGACCTAAGAATCCAAACAGT | 57.006 | 40.909 | 0.00 | 0.00 | 42.14 | 3.55 |
6776 | 21231 | 9.832445 | GATGTGTTTTCTTATATGGACCTAAGA | 57.168 | 33.333 | 0.00 | 0.00 | 33.32 | 2.10 |
6834 | 21291 | 5.586243 | TGTTTGCTATCAATCTAGCTTCACC | 59.414 | 40.000 | 0.00 | 0.00 | 43.68 | 4.02 |
6867 | 21327 | 8.870160 | AGAATGATCTCTACTTTCAGATTTCG | 57.130 | 34.615 | 0.00 | 0.00 | 29.01 | 3.46 |
6875 | 21335 | 8.802267 | ACTGCCTATAGAATGATCTCTACTTTC | 58.198 | 37.037 | 0.00 | 0.00 | 37.10 | 2.62 |
6876 | 21336 | 8.719645 | ACTGCCTATAGAATGATCTCTACTTT | 57.280 | 34.615 | 0.00 | 0.00 | 37.10 | 2.66 |
6877 | 21337 | 8.719645 | AACTGCCTATAGAATGATCTCTACTT | 57.280 | 34.615 | 0.00 | 0.00 | 37.10 | 2.24 |
6878 | 21338 | 8.719645 | AAACTGCCTATAGAATGATCTCTACT | 57.280 | 34.615 | 0.00 | 0.00 | 37.10 | 2.57 |
6879 | 21339 | 9.771534 | AAAAACTGCCTATAGAATGATCTCTAC | 57.228 | 33.333 | 0.00 | 0.00 | 37.10 | 2.59 |
6908 | 21368 | 8.352201 | GCTGCATGATAATTGGTAAATCAAGTA | 58.648 | 33.333 | 0.00 | 0.00 | 33.60 | 2.24 |
6909 | 21369 | 7.205297 | GCTGCATGATAATTGGTAAATCAAGT | 58.795 | 34.615 | 0.00 | 0.00 | 33.60 | 3.16 |
6910 | 21370 | 6.643770 | GGCTGCATGATAATTGGTAAATCAAG | 59.356 | 38.462 | 0.50 | 0.00 | 33.60 | 3.02 |
6911 | 21371 | 6.097981 | TGGCTGCATGATAATTGGTAAATCAA | 59.902 | 34.615 | 0.50 | 0.00 | 33.60 | 2.57 |
6912 | 21372 | 5.597594 | TGGCTGCATGATAATTGGTAAATCA | 59.402 | 36.000 | 0.50 | 0.00 | 34.35 | 2.57 |
6913 | 21373 | 6.088016 | TGGCTGCATGATAATTGGTAAATC | 57.912 | 37.500 | 0.50 | 0.00 | 0.00 | 2.17 |
6914 | 21374 | 5.510179 | GCTGGCTGCATGATAATTGGTAAAT | 60.510 | 40.000 | 11.80 | 0.00 | 42.31 | 1.40 |
6915 | 21375 | 4.202141 | GCTGGCTGCATGATAATTGGTAAA | 60.202 | 41.667 | 11.80 | 0.00 | 42.31 | 2.01 |
6916 | 21376 | 3.318839 | GCTGGCTGCATGATAATTGGTAA | 59.681 | 43.478 | 11.80 | 0.00 | 42.31 | 2.85 |
6917 | 21377 | 2.886523 | GCTGGCTGCATGATAATTGGTA | 59.113 | 45.455 | 11.80 | 0.00 | 42.31 | 3.25 |
6918 | 21378 | 1.684983 | GCTGGCTGCATGATAATTGGT | 59.315 | 47.619 | 11.80 | 0.00 | 42.31 | 3.67 |
6919 | 21379 | 2.433868 | GCTGGCTGCATGATAATTGG | 57.566 | 50.000 | 11.80 | 0.00 | 42.31 | 3.16 |
6930 | 21390 | 1.403323 | GTTCCTTAATCTGCTGGCTGC | 59.597 | 52.381 | 9.67 | 9.67 | 43.25 | 5.25 |
6931 | 21391 | 2.715046 | TGTTCCTTAATCTGCTGGCTG | 58.285 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
6932 | 21392 | 3.659183 | ATGTTCCTTAATCTGCTGGCT | 57.341 | 42.857 | 0.00 | 0.00 | 0.00 | 4.75 |
6933 | 21393 | 5.300286 | ACATTATGTTCCTTAATCTGCTGGC | 59.700 | 40.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6934 | 21394 | 6.949352 | ACATTATGTTCCTTAATCTGCTGG | 57.051 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
6936 | 21396 | 9.851686 | TGATTACATTATGTTCCTTAATCTGCT | 57.148 | 29.630 | 2.23 | 0.00 | 0.00 | 4.24 |
6973 | 21433 | 5.105877 | CCTGTCATTGCTGATTCTGTTGAAT | 60.106 | 40.000 | 0.00 | 0.00 | 44.79 | 2.57 |
6974 | 21434 | 4.216902 | CCTGTCATTGCTGATTCTGTTGAA | 59.783 | 41.667 | 0.00 | 0.00 | 36.54 | 2.69 |
6975 | 21435 | 3.754850 | CCTGTCATTGCTGATTCTGTTGA | 59.245 | 43.478 | 0.00 | 0.00 | 32.98 | 3.18 |
6976 | 21436 | 3.754850 | TCCTGTCATTGCTGATTCTGTTG | 59.245 | 43.478 | 0.00 | 0.00 | 32.98 | 3.33 |
6977 | 21437 | 4.025040 | TCCTGTCATTGCTGATTCTGTT | 57.975 | 40.909 | 0.00 | 0.00 | 32.98 | 3.16 |
6978 | 21438 | 3.708403 | TCCTGTCATTGCTGATTCTGT | 57.292 | 42.857 | 0.00 | 0.00 | 32.98 | 3.41 |
6979 | 21439 | 4.008330 | ACTTCCTGTCATTGCTGATTCTG | 58.992 | 43.478 | 0.00 | 0.00 | 32.98 | 3.02 |
6980 | 21440 | 4.008330 | CACTTCCTGTCATTGCTGATTCT | 58.992 | 43.478 | 0.00 | 0.00 | 32.98 | 2.40 |
6981 | 21441 | 3.755378 | ACACTTCCTGTCATTGCTGATTC | 59.245 | 43.478 | 0.00 | 0.00 | 32.98 | 2.52 |
6982 | 21442 | 3.504906 | CACACTTCCTGTCATTGCTGATT | 59.495 | 43.478 | 0.00 | 0.00 | 32.98 | 2.57 |
6983 | 21443 | 3.079578 | CACACTTCCTGTCATTGCTGAT | 58.920 | 45.455 | 0.00 | 0.00 | 32.98 | 2.90 |
6984 | 21444 | 2.104622 | TCACACTTCCTGTCATTGCTGA | 59.895 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
6985 | 21445 | 2.497138 | TCACACTTCCTGTCATTGCTG | 58.503 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
6986 | 21446 | 2.936919 | TCACACTTCCTGTCATTGCT | 57.063 | 45.000 | 0.00 | 0.00 | 0.00 | 3.91 |
6987 | 21447 | 3.988379 | TTTCACACTTCCTGTCATTGC | 57.012 | 42.857 | 0.00 | 0.00 | 0.00 | 3.56 |
6988 | 21448 | 4.035091 | TCGTTTTCACACTTCCTGTCATTG | 59.965 | 41.667 | 0.00 | 0.00 | 0.00 | 2.82 |
6989 | 21449 | 4.196193 | TCGTTTTCACACTTCCTGTCATT | 58.804 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
6990 | 21450 | 3.804036 | TCGTTTTCACACTTCCTGTCAT | 58.196 | 40.909 | 0.00 | 0.00 | 0.00 | 3.06 |
6991 | 21451 | 3.254470 | TCGTTTTCACACTTCCTGTCA | 57.746 | 42.857 | 0.00 | 0.00 | 0.00 | 3.58 |
6992 | 21452 | 3.807622 | TGATCGTTTTCACACTTCCTGTC | 59.192 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
6993 | 21453 | 3.560068 | GTGATCGTTTTCACACTTCCTGT | 59.440 | 43.478 | 9.82 | 0.00 | 44.38 | 4.00 |
6994 | 21454 | 3.058914 | GGTGATCGTTTTCACACTTCCTG | 60.059 | 47.826 | 14.52 | 0.00 | 46.32 | 3.86 |
6995 | 21455 | 3.139077 | GGTGATCGTTTTCACACTTCCT | 58.861 | 45.455 | 14.52 | 0.00 | 46.32 | 3.36 |
6996 | 21456 | 2.875933 | TGGTGATCGTTTTCACACTTCC | 59.124 | 45.455 | 14.52 | 2.19 | 46.32 | 3.46 |
6997 | 21457 | 3.560068 | ACTGGTGATCGTTTTCACACTTC | 59.440 | 43.478 | 14.52 | 2.48 | 46.32 | 3.01 |
6998 | 21458 | 3.541632 | ACTGGTGATCGTTTTCACACTT | 58.458 | 40.909 | 14.52 | 0.19 | 46.32 | 3.16 |
6999 | 21459 | 3.194005 | ACTGGTGATCGTTTTCACACT | 57.806 | 42.857 | 14.52 | 0.00 | 46.32 | 3.55 |
7000 | 21460 | 3.603857 | CGAACTGGTGATCGTTTTCACAC | 60.604 | 47.826 | 14.52 | 0.00 | 46.32 | 3.82 |
7001 | 21461 | 2.542178 | CGAACTGGTGATCGTTTTCACA | 59.458 | 45.455 | 14.52 | 4.29 | 46.32 | 3.58 |
7002 | 21462 | 2.661979 | GCGAACTGGTGATCGTTTTCAC | 60.662 | 50.000 | 7.17 | 7.17 | 44.27 | 3.18 |
7003 | 21463 | 1.529438 | GCGAACTGGTGATCGTTTTCA | 59.471 | 47.619 | 0.00 | 0.00 | 40.02 | 2.69 |
7004 | 21464 | 1.136057 | GGCGAACTGGTGATCGTTTTC | 60.136 | 52.381 | 0.00 | 0.00 | 40.02 | 2.29 |
7005 | 21465 | 0.872388 | GGCGAACTGGTGATCGTTTT | 59.128 | 50.000 | 0.00 | 0.00 | 40.02 | 2.43 |
7006 | 21466 | 0.250124 | TGGCGAACTGGTGATCGTTT | 60.250 | 50.000 | 0.00 | 0.00 | 40.02 | 3.60 |
7007 | 21467 | 0.670546 | CTGGCGAACTGGTGATCGTT | 60.671 | 55.000 | 0.00 | 0.00 | 40.02 | 3.85 |
7008 | 21468 | 1.079819 | CTGGCGAACTGGTGATCGT | 60.080 | 57.895 | 0.00 | 0.00 | 40.02 | 3.73 |
7009 | 21469 | 2.456119 | GCTGGCGAACTGGTGATCG | 61.456 | 63.158 | 0.00 | 0.00 | 40.68 | 3.69 |
7010 | 21470 | 2.456119 | CGCTGGCGAACTGGTGATC | 61.456 | 63.158 | 9.51 | 0.00 | 42.83 | 2.92 |
7011 | 21471 | 2.434884 | CGCTGGCGAACTGGTGAT | 60.435 | 61.111 | 9.51 | 0.00 | 42.83 | 3.06 |
7017 | 21477 | 4.749310 | CTCCTGCGCTGGCGAACT | 62.749 | 66.667 | 27.02 | 0.00 | 44.10 | 3.01 |
7036 | 21496 | 3.901797 | AAGGAGTTTGGGCGCCGAG | 62.902 | 63.158 | 22.54 | 0.00 | 33.40 | 4.63 |
7037 | 21497 | 2.969300 | AAAAGGAGTTTGGGCGCCGA | 62.969 | 55.000 | 22.54 | 15.52 | 33.40 | 5.54 |
7038 | 21498 | 2.082629 | AAAAAGGAGTTTGGGCGCCG | 62.083 | 55.000 | 22.54 | 0.00 | 33.40 | 6.46 |
7039 | 21499 | 0.963225 | TAAAAAGGAGTTTGGGCGCC | 59.037 | 50.000 | 21.18 | 21.18 | 0.00 | 6.53 |
7040 | 21500 | 1.336517 | GGTAAAAAGGAGTTTGGGCGC | 60.337 | 52.381 | 0.00 | 0.00 | 0.00 | 6.53 |
7041 | 21501 | 1.068816 | CGGTAAAAAGGAGTTTGGGCG | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
7042 | 21502 | 1.271379 | CCGGTAAAAAGGAGTTTGGGC | 59.729 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 |
7043 | 21503 | 2.817844 | CTCCGGTAAAAAGGAGTTTGGG | 59.182 | 50.000 | 0.00 | 0.00 | 46.68 | 4.12 |
7211 | 21672 | 4.142816 | CCACTCAAAAAGTATTGCCTCTCG | 60.143 | 45.833 | 0.00 | 0.00 | 36.07 | 4.04 |
7231 | 21692 | 0.317269 | GCATGCATGCGTACATCCAC | 60.317 | 55.000 | 33.99 | 6.88 | 44.67 | 4.02 |
7232 | 21693 | 2.024117 | GCATGCATGCGTACATCCA | 58.976 | 52.632 | 33.99 | 0.00 | 44.67 | 3.41 |
7233 | 21694 | 4.929198 | GCATGCATGCGTACATCC | 57.071 | 55.556 | 33.99 | 8.38 | 44.67 | 3.51 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.