Multiple sequence alignment - TraesCS7B01G026400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G026400 chr7B 100.000 3374 0 0 1 3374 25627145 25630518 0.000000e+00 6231.0
1 TraesCS7B01G026400 chr7B 85.437 1030 111 23 2368 3374 25652992 25654005 0.000000e+00 1035.0
2 TraesCS7B01G026400 chr7B 86.651 839 92 9 2538 3374 25888982 25888162 0.000000e+00 911.0
3 TraesCS7B01G026400 chr7B 88.397 655 76 0 2649 3303 25662822 25663476 0.000000e+00 789.0
4 TraesCS7B01G026400 chr7B 97.490 239 6 0 1 239 25601124 25601362 3.130000e-110 409.0
5 TraesCS7B01G026400 chr7B 97.500 240 5 1 1 239 625767590 625767351 3.130000e-110 409.0
6 TraesCS7B01G026400 chr7B 94.697 264 11 2 1 263 625745076 625744815 1.130000e-109 407.0
7 TraesCS7B01G026400 chr7B 96.667 240 7 1 1 239 252702082 252702321 6.780000e-107 398.0
8 TraesCS7B01G026400 chr7B 96.653 239 8 0 1 239 261681921 261681683 6.780000e-107 398.0
9 TraesCS7B01G026400 chr7B 96.667 240 7 1 1 239 342307710 342307949 6.780000e-107 398.0
10 TraesCS7B01G026400 chr7B 91.270 126 9 2 2664 2788 25889536 25889412 1.610000e-38 171.0
11 TraesCS7B01G026400 chr7B 85.034 147 19 3 1674 1819 25890296 25890152 2.710000e-31 147.0
12 TraesCS7B01G026400 chr7D 92.795 2776 103 49 647 3374 78206623 78209349 0.000000e+00 3928.0
13 TraesCS7B01G026400 chr7D 86.130 1031 101 25 2368 3374 78299846 78300858 0.000000e+00 1074.0
14 TraesCS7B01G026400 chr7D 87.101 845 92 9 2538 3374 78306629 78307464 0.000000e+00 941.0
15 TraesCS7B01G026400 chr7D 88.966 145 13 3 2645 2788 78306057 78306199 3.460000e-40 176.0
16 TraesCS7B01G026400 chr7D 100.000 31 0 0 288 318 584306668 584306698 1.310000e-04 58.4
17 TraesCS7B01G026400 chr7A 94.102 2255 96 20 1139 3374 81638311 81640547 0.000000e+00 3393.0
18 TraesCS7B01G026400 chr7A 84.380 1178 129 30 2232 3374 81766987 81768144 0.000000e+00 1105.0
19 TraesCS7B01G026400 chr7A 89.160 738 69 7 2646 3374 81775605 81776340 0.000000e+00 909.0
20 TraesCS7B01G026400 chr7A 82.477 428 28 20 674 1075 81637580 81637986 6.980000e-87 331.0
21 TraesCS7B01G026400 chr3B 97.490 239 4 1 3 239 574383489 574383251 1.130000e-109 407.0
22 TraesCS7B01G026400 chr6B 96.653 239 8 0 1 239 520600696 520600458 6.780000e-107 398.0
23 TraesCS7B01G026400 chr6B 100.000 31 0 0 288 318 171123048 171123078 1.310000e-04 58.4
24 TraesCS7B01G026400 chr4B 96.653 239 8 0 1 239 611309204 611308966 6.780000e-107 398.0
25 TraesCS7B01G026400 chr3D 80.992 242 43 3 309 549 496100503 496100742 4.440000e-44 189.0
26 TraesCS7B01G026400 chr3D 100.000 31 0 0 288 318 401520911 401520881 1.310000e-04 58.4
27 TraesCS7B01G026400 chr6A 100.000 32 0 0 289 320 229354230 229354261 3.640000e-05 60.2
28 TraesCS7B01G026400 chr6A 100.000 31 0 0 289 319 545223938 545223908 1.310000e-04 58.4
29 TraesCS7B01G026400 chr6A 92.683 41 0 3 285 322 311188747 311188787 4.700000e-04 56.5
30 TraesCS7B01G026400 chr1A 100.000 31 0 0 288 318 190042317 190042287 1.310000e-04 58.4
31 TraesCS7B01G026400 chr6D 94.595 37 1 1 289 324 170494850 170494886 4.700000e-04 56.5
32 TraesCS7B01G026400 chr3A 100.000 30 0 0 289 318 578919070 578919099 4.700000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G026400 chr7B 25627145 25630518 3373 False 6231.000000 6231 100.000000 1 3374 1 chr7B.!!$F2 3373
1 TraesCS7B01G026400 chr7B 25652992 25654005 1013 False 1035.000000 1035 85.437000 2368 3374 1 chr7B.!!$F3 1006
2 TraesCS7B01G026400 chr7B 25662822 25663476 654 False 789.000000 789 88.397000 2649 3303 1 chr7B.!!$F4 654
3 TraesCS7B01G026400 chr7B 25888162 25890296 2134 True 409.666667 911 87.651667 1674 3374 3 chr7B.!!$R4 1700
4 TraesCS7B01G026400 chr7D 78206623 78209349 2726 False 3928.000000 3928 92.795000 647 3374 1 chr7D.!!$F1 2727
5 TraesCS7B01G026400 chr7D 78299846 78300858 1012 False 1074.000000 1074 86.130000 2368 3374 1 chr7D.!!$F2 1006
6 TraesCS7B01G026400 chr7D 78306057 78307464 1407 False 558.500000 941 88.033500 2538 3374 2 chr7D.!!$F4 836
7 TraesCS7B01G026400 chr7A 81637580 81640547 2967 False 1862.000000 3393 88.289500 674 3374 2 chr7A.!!$F3 2700
8 TraesCS7B01G026400 chr7A 81766987 81768144 1157 False 1105.000000 1105 84.380000 2232 3374 1 chr7A.!!$F1 1142
9 TraesCS7B01G026400 chr7A 81775605 81776340 735 False 909.000000 909 89.160000 2646 3374 1 chr7A.!!$F2 728

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
131 132 0.034896 TCCACGCAAAGAAGAGTCCC 59.965 55.0 0.00 0.0 0.0 4.46 F
373 374 0.036306 GGATCCGGGCCATACGAAAT 59.964 55.0 4.39 0.0 0.0 2.17 F
377 378 0.250727 CCGGGCCATACGAAATCCAT 60.251 55.0 4.39 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2102 2417 0.834612 CTGCATTGCCCCCAAATCAT 59.165 50.0 6.12 0.0 34.05 2.45 R
2225 2540 5.616270 TGTTAAACAATCACCAGTGCTAGA 58.384 37.5 0.00 0.0 0.00 2.43 R
2441 2791 5.593909 TCCAGCAGTTTTGAAGAAGAAATCA 59.406 36.0 0.00 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.758790 AAACCCTAGAAGTCTAAACCCTC 57.241 43.478 0.00 0.00 0.00 4.30
24 25 3.722172 ACCCTAGAAGTCTAAACCCTCC 58.278 50.000 0.00 0.00 0.00 4.30
25 26 2.694109 CCCTAGAAGTCTAAACCCTCCG 59.306 54.545 0.00 0.00 0.00 4.63
26 27 2.694109 CCTAGAAGTCTAAACCCTCCGG 59.306 54.545 0.00 0.00 0.00 5.14
40 41 3.899980 ACCCTCCGGTTTATATAGACACC 59.100 47.826 0.00 2.59 40.58 4.16
44 45 3.308438 CGGTTTATATAGACACCGGGG 57.692 52.381 15.65 0.00 46.92 5.73
45 46 2.028748 CGGTTTATATAGACACCGGGGG 60.029 54.545 15.65 0.00 46.92 5.40
60 61 3.404636 GGGGGACTAGGGTTGTACA 57.595 57.895 0.00 0.00 0.00 2.90
61 62 1.660242 GGGGGACTAGGGTTGTACAA 58.340 55.000 3.59 3.59 0.00 2.41
62 63 1.987368 GGGGGACTAGGGTTGTACAAA 59.013 52.381 10.51 0.00 0.00 2.83
63 64 2.026542 GGGGGACTAGGGTTGTACAAAG 60.027 54.545 10.51 6.67 0.00 2.77
64 65 2.641321 GGGGACTAGGGTTGTACAAAGT 59.359 50.000 10.51 10.11 0.00 2.66
65 66 3.307269 GGGGACTAGGGTTGTACAAAGTC 60.307 52.174 21.96 21.96 34.08 3.01
66 67 3.582780 GGACTAGGGTTGTACAAAGTCG 58.417 50.000 22.66 10.27 35.34 4.18
67 68 3.582780 GACTAGGGTTGTACAAAGTCGG 58.417 50.000 17.84 9.08 0.00 4.79
68 69 2.967887 ACTAGGGTTGTACAAAGTCGGT 59.032 45.455 10.51 4.58 0.00 4.69
69 70 3.389002 ACTAGGGTTGTACAAAGTCGGTT 59.611 43.478 10.51 0.00 0.00 4.44
70 71 4.588528 ACTAGGGTTGTACAAAGTCGGTTA 59.411 41.667 10.51 0.00 0.00 2.85
71 72 3.732212 AGGGTTGTACAAAGTCGGTTAC 58.268 45.455 10.51 0.00 0.00 2.50
72 73 3.134442 AGGGTTGTACAAAGTCGGTTACA 59.866 43.478 10.51 0.00 0.00 2.41
73 74 3.495753 GGGTTGTACAAAGTCGGTTACAG 59.504 47.826 10.51 0.00 0.00 2.74
74 75 4.370917 GGTTGTACAAAGTCGGTTACAGA 58.629 43.478 10.51 0.00 0.00 3.41
75 76 4.446719 GGTTGTACAAAGTCGGTTACAGAG 59.553 45.833 10.51 0.00 0.00 3.35
76 77 5.284079 GTTGTACAAAGTCGGTTACAGAGA 58.716 41.667 10.51 0.00 0.00 3.10
77 78 5.518848 TGTACAAAGTCGGTTACAGAGAA 57.481 39.130 0.00 0.00 0.00 2.87
78 79 5.904941 TGTACAAAGTCGGTTACAGAGAAA 58.095 37.500 0.00 0.00 0.00 2.52
79 80 5.981315 TGTACAAAGTCGGTTACAGAGAAAG 59.019 40.000 0.00 0.00 0.00 2.62
80 81 4.377897 ACAAAGTCGGTTACAGAGAAAGG 58.622 43.478 0.00 0.00 0.00 3.11
81 82 4.100498 ACAAAGTCGGTTACAGAGAAAGGA 59.900 41.667 0.00 0.00 0.00 3.36
82 83 4.950205 AAGTCGGTTACAGAGAAAGGAA 57.050 40.909 0.00 0.00 0.00 3.36
83 84 5.485209 AAGTCGGTTACAGAGAAAGGAAT 57.515 39.130 0.00 0.00 0.00 3.01
84 85 5.074584 AGTCGGTTACAGAGAAAGGAATC 57.925 43.478 0.00 0.00 0.00 2.52
85 86 4.773149 AGTCGGTTACAGAGAAAGGAATCT 59.227 41.667 0.00 0.00 0.00 2.40
86 87 5.950549 AGTCGGTTACAGAGAAAGGAATCTA 59.049 40.000 0.00 0.00 0.00 1.98
87 88 6.035217 GTCGGTTACAGAGAAAGGAATCTAC 58.965 44.000 0.00 0.00 0.00 2.59
88 89 5.713389 TCGGTTACAGAGAAAGGAATCTACA 59.287 40.000 0.00 0.00 0.00 2.74
89 90 6.380274 TCGGTTACAGAGAAAGGAATCTACAT 59.620 38.462 0.00 0.00 0.00 2.29
90 91 7.558807 TCGGTTACAGAGAAAGGAATCTACATA 59.441 37.037 0.00 0.00 0.00 2.29
91 92 8.361139 CGGTTACAGAGAAAGGAATCTACATAT 58.639 37.037 0.00 0.00 0.00 1.78
92 93 9.699703 GGTTACAGAGAAAGGAATCTACATATC 57.300 37.037 0.00 0.00 0.00 1.63
93 94 9.699703 GTTACAGAGAAAGGAATCTACATATCC 57.300 37.037 0.00 0.00 0.00 2.59
94 95 6.987386 ACAGAGAAAGGAATCTACATATCCG 58.013 40.000 0.00 0.00 38.31 4.18
95 96 6.778069 ACAGAGAAAGGAATCTACATATCCGA 59.222 38.462 0.00 0.00 38.31 4.55
96 97 7.287927 ACAGAGAAAGGAATCTACATATCCGAA 59.712 37.037 0.00 0.00 38.31 4.30
97 98 8.310382 CAGAGAAAGGAATCTACATATCCGAAT 58.690 37.037 0.00 0.00 38.31 3.34
98 99 8.527810 AGAGAAAGGAATCTACATATCCGAATC 58.472 37.037 0.00 0.00 38.31 2.52
99 100 7.316640 AGAAAGGAATCTACATATCCGAATCG 58.683 38.462 0.00 0.00 38.31 3.34
100 101 5.000012 AGGAATCTACATATCCGAATCGC 58.000 43.478 0.00 0.00 38.31 4.58
101 102 4.113354 GGAATCTACATATCCGAATCGCC 58.887 47.826 0.00 0.00 0.00 5.54
102 103 4.381612 GGAATCTACATATCCGAATCGCCA 60.382 45.833 0.00 0.00 0.00 5.69
103 104 4.801330 ATCTACATATCCGAATCGCCAA 57.199 40.909 0.00 0.00 0.00 4.52
104 105 4.174411 TCTACATATCCGAATCGCCAAG 57.826 45.455 0.00 0.00 0.00 3.61
105 106 1.512926 ACATATCCGAATCGCCAAGC 58.487 50.000 0.00 0.00 0.00 4.01
106 107 1.070758 ACATATCCGAATCGCCAAGCT 59.929 47.619 0.00 0.00 0.00 3.74
107 108 2.146342 CATATCCGAATCGCCAAGCTT 58.854 47.619 0.00 0.00 0.00 3.74
108 109 1.581934 TATCCGAATCGCCAAGCTTG 58.418 50.000 19.93 19.93 0.00 4.01
109 110 1.718757 ATCCGAATCGCCAAGCTTGC 61.719 55.000 21.43 14.85 0.00 4.01
110 111 2.100991 CGAATCGCCAAGCTTGCC 59.899 61.111 21.43 9.45 0.00 4.52
111 112 2.401766 CGAATCGCCAAGCTTGCCT 61.402 57.895 21.43 2.43 0.00 4.75
112 113 1.885871 GAATCGCCAAGCTTGCCTT 59.114 52.632 21.43 10.35 0.00 4.35
113 114 0.179153 GAATCGCCAAGCTTGCCTTC 60.179 55.000 21.43 14.81 0.00 3.46
114 115 1.598701 AATCGCCAAGCTTGCCTTCC 61.599 55.000 21.43 5.26 0.00 3.46
115 116 2.769652 ATCGCCAAGCTTGCCTTCCA 62.770 55.000 21.43 1.33 0.00 3.53
116 117 2.653115 GCCAAGCTTGCCTTCCAC 59.347 61.111 21.43 0.12 0.00 4.02
117 118 2.956987 CCAAGCTTGCCTTCCACG 59.043 61.111 21.43 0.62 0.00 4.94
118 119 2.256461 CAAGCTTGCCTTCCACGC 59.744 61.111 14.65 0.00 38.87 5.34
119 120 2.203337 AAGCTTGCCTTCCACGCA 60.203 55.556 0.00 0.00 40.87 5.24
120 121 1.827789 AAGCTTGCCTTCCACGCAA 60.828 52.632 0.00 0.00 43.71 4.85
121 122 1.391157 AAGCTTGCCTTCCACGCAAA 61.391 50.000 0.00 0.00 45.11 3.68
122 123 1.372128 GCTTGCCTTCCACGCAAAG 60.372 57.895 0.00 0.00 45.11 2.77
123 124 1.795170 GCTTGCCTTCCACGCAAAGA 61.795 55.000 0.00 0.00 45.11 2.52
124 125 0.667993 CTTGCCTTCCACGCAAAGAA 59.332 50.000 0.00 0.00 45.11 2.52
125 126 0.667993 TTGCCTTCCACGCAAAGAAG 59.332 50.000 0.00 0.00 43.00 2.85
126 127 0.179032 TGCCTTCCACGCAAAGAAGA 60.179 50.000 7.89 0.00 41.69 2.87
127 128 0.519077 GCCTTCCACGCAAAGAAGAG 59.481 55.000 7.89 1.31 41.69 2.85
128 129 1.884235 CCTTCCACGCAAAGAAGAGT 58.116 50.000 7.89 0.00 41.69 3.24
129 130 1.801178 CCTTCCACGCAAAGAAGAGTC 59.199 52.381 7.89 0.00 41.69 3.36
130 131 1.801178 CTTCCACGCAAAGAAGAGTCC 59.199 52.381 1.36 0.00 41.69 3.85
131 132 0.034896 TCCACGCAAAGAAGAGTCCC 59.965 55.000 0.00 0.00 0.00 4.46
132 133 0.250295 CCACGCAAAGAAGAGTCCCA 60.250 55.000 0.00 0.00 0.00 4.37
133 134 1.611673 CCACGCAAAGAAGAGTCCCAT 60.612 52.381 0.00 0.00 0.00 4.00
134 135 1.734465 CACGCAAAGAAGAGTCCCATC 59.266 52.381 0.00 0.00 0.00 3.51
135 136 1.339151 ACGCAAAGAAGAGTCCCATCC 60.339 52.381 0.00 0.00 0.00 3.51
136 137 1.373570 GCAAAGAAGAGTCCCATCCG 58.626 55.000 0.00 0.00 0.00 4.18
137 138 2.014068 GCAAAGAAGAGTCCCATCCGG 61.014 57.143 0.00 0.00 0.00 5.14
138 139 1.555075 CAAAGAAGAGTCCCATCCGGA 59.445 52.381 6.61 6.61 38.83 5.14
147 148 4.935495 CCATCCGGACATGGGGCG 62.935 72.222 15.34 0.00 39.95 6.13
148 149 3.860605 CATCCGGACATGGGGCGA 61.861 66.667 6.12 0.00 0.00 5.54
149 150 3.087253 ATCCGGACATGGGGCGAA 61.087 61.111 6.12 0.00 0.00 4.70
150 151 3.106986 ATCCGGACATGGGGCGAAG 62.107 63.158 6.12 0.00 0.00 3.79
151 152 4.096003 CCGGACATGGGGCGAAGT 62.096 66.667 0.00 0.00 0.00 3.01
152 153 2.511600 CGGACATGGGGCGAAGTC 60.512 66.667 0.00 0.00 0.00 3.01
153 154 2.990479 GGACATGGGGCGAAGTCT 59.010 61.111 0.00 0.00 0.00 3.24
154 155 1.299976 GGACATGGGGCGAAGTCTT 59.700 57.895 0.00 0.00 0.00 3.01
155 156 0.744771 GGACATGGGGCGAAGTCTTC 60.745 60.000 2.18 2.18 0.00 2.87
156 157 0.250513 GACATGGGGCGAAGTCTTCT 59.749 55.000 10.81 0.00 0.00 2.85
157 158 1.480954 GACATGGGGCGAAGTCTTCTA 59.519 52.381 10.81 0.00 0.00 2.10
158 159 2.103263 GACATGGGGCGAAGTCTTCTAT 59.897 50.000 10.81 0.00 0.00 1.98
159 160 2.103263 ACATGGGGCGAAGTCTTCTATC 59.897 50.000 10.81 0.33 0.00 2.08
160 161 2.160721 TGGGGCGAAGTCTTCTATCT 57.839 50.000 10.81 0.00 0.00 1.98
161 162 2.467880 TGGGGCGAAGTCTTCTATCTT 58.532 47.619 10.81 0.00 0.00 2.40
162 163 2.168521 TGGGGCGAAGTCTTCTATCTTG 59.831 50.000 10.81 0.00 0.00 3.02
163 164 2.168728 GGGGCGAAGTCTTCTATCTTGT 59.831 50.000 10.81 0.00 0.00 3.16
164 165 3.383825 GGGGCGAAGTCTTCTATCTTGTA 59.616 47.826 10.81 0.00 0.00 2.41
165 166 4.039366 GGGGCGAAGTCTTCTATCTTGTAT 59.961 45.833 10.81 0.00 0.00 2.29
166 167 5.224135 GGGCGAAGTCTTCTATCTTGTATC 58.776 45.833 10.81 0.00 0.00 2.24
167 168 5.010213 GGGCGAAGTCTTCTATCTTGTATCT 59.990 44.000 10.81 0.00 0.00 1.98
168 169 6.461788 GGGCGAAGTCTTCTATCTTGTATCTT 60.462 42.308 10.81 0.00 0.00 2.40
169 170 6.639279 GGCGAAGTCTTCTATCTTGTATCTTC 59.361 42.308 10.81 0.00 0.00 2.87
170 171 7.197017 GCGAAGTCTTCTATCTTGTATCTTCA 58.803 38.462 10.81 0.00 32.10 3.02
171 172 7.865385 GCGAAGTCTTCTATCTTGTATCTTCAT 59.135 37.037 10.81 0.00 32.10 2.57
177 178 9.868160 TCTTCTATCTTGTATCTTCATAGTCCA 57.132 33.333 0.00 0.00 0.00 4.02
180 181 9.421399 TCTATCTTGTATCTTCATAGTCCAACA 57.579 33.333 0.00 0.00 0.00 3.33
181 182 9.689976 CTATCTTGTATCTTCATAGTCCAACAG 57.310 37.037 0.00 0.00 0.00 3.16
182 183 7.482169 TCTTGTATCTTCATAGTCCAACAGT 57.518 36.000 0.00 0.00 0.00 3.55
183 184 7.548097 TCTTGTATCTTCATAGTCCAACAGTC 58.452 38.462 0.00 0.00 0.00 3.51
184 185 6.222038 TGTATCTTCATAGTCCAACAGTCC 57.778 41.667 0.00 0.00 0.00 3.85
185 186 3.868757 TCTTCATAGTCCAACAGTCCG 57.131 47.619 0.00 0.00 0.00 4.79
186 187 2.496070 TCTTCATAGTCCAACAGTCCGG 59.504 50.000 0.00 0.00 0.00 5.14
187 188 0.535335 TCATAGTCCAACAGTCCGGC 59.465 55.000 0.00 0.00 0.00 6.13
188 189 0.462047 CATAGTCCAACAGTCCGGCC 60.462 60.000 0.00 0.00 0.00 6.13
189 190 0.907704 ATAGTCCAACAGTCCGGCCA 60.908 55.000 2.24 0.00 0.00 5.36
190 191 1.122632 TAGTCCAACAGTCCGGCCAA 61.123 55.000 2.24 0.00 0.00 4.52
191 192 1.527380 GTCCAACAGTCCGGCCAAA 60.527 57.895 2.24 0.00 0.00 3.28
192 193 1.228124 TCCAACAGTCCGGCCAAAG 60.228 57.895 2.24 0.00 0.00 2.77
193 194 1.528309 CCAACAGTCCGGCCAAAGT 60.528 57.895 2.24 0.00 0.00 2.66
194 195 0.250553 CCAACAGTCCGGCCAAAGTA 60.251 55.000 2.24 0.00 0.00 2.24
195 196 1.613255 CCAACAGTCCGGCCAAAGTAT 60.613 52.381 2.24 0.00 0.00 2.12
196 197 2.355310 CCAACAGTCCGGCCAAAGTATA 60.355 50.000 2.24 0.00 0.00 1.47
197 198 3.541632 CAACAGTCCGGCCAAAGTATAT 58.458 45.455 2.24 0.00 0.00 0.86
198 199 4.443739 CCAACAGTCCGGCCAAAGTATATA 60.444 45.833 2.24 0.00 0.00 0.86
199 200 4.602340 ACAGTCCGGCCAAAGTATATAG 57.398 45.455 2.24 0.00 0.00 1.31
200 201 3.965347 ACAGTCCGGCCAAAGTATATAGT 59.035 43.478 2.24 0.00 0.00 2.12
201 202 4.038883 ACAGTCCGGCCAAAGTATATAGTC 59.961 45.833 2.24 0.00 0.00 2.59
202 203 3.577415 AGTCCGGCCAAAGTATATAGTCC 59.423 47.826 2.24 0.00 0.00 3.85
203 204 2.559668 TCCGGCCAAAGTATATAGTCCG 59.440 50.000 2.24 7.97 35.80 4.79
204 205 2.955614 CGGCCAAAGTATATAGTCCGG 58.044 52.381 2.24 0.00 32.75 5.14
205 206 2.696506 GGCCAAAGTATATAGTCCGGC 58.303 52.381 16.68 16.68 37.57 6.13
206 207 2.302157 GGCCAAAGTATATAGTCCGGCT 59.698 50.000 21.14 0.00 38.37 5.52
207 208 3.326747 GCCAAAGTATATAGTCCGGCTG 58.673 50.000 17.30 0.00 35.39 4.85
208 209 3.244112 GCCAAAGTATATAGTCCGGCTGT 60.244 47.826 17.30 0.00 35.39 4.40
209 210 4.557205 CCAAAGTATATAGTCCGGCTGTC 58.443 47.826 0.00 0.00 0.00 3.51
210 211 4.557205 CAAAGTATATAGTCCGGCTGTCC 58.443 47.826 0.00 0.00 0.00 4.02
221 222 3.003763 GCTGTCCGAGGACCCCTT 61.004 66.667 18.57 0.00 43.97 3.95
222 223 1.684734 GCTGTCCGAGGACCCCTTA 60.685 63.158 18.57 0.00 43.97 2.69
223 224 1.677637 GCTGTCCGAGGACCCCTTAG 61.678 65.000 18.57 10.32 43.97 2.18
224 225 0.324460 CTGTCCGAGGACCCCTTAGT 60.324 60.000 18.57 0.00 43.97 2.24
225 226 0.324091 TGTCCGAGGACCCCTTAGTC 60.324 60.000 18.57 0.00 43.97 2.59
232 233 3.713867 GACCCCTTAGTCCAGGACT 57.286 57.895 25.92 25.92 45.54 3.85
233 234 1.487300 GACCCCTTAGTCCAGGACTC 58.513 60.000 26.42 6.18 42.40 3.36
234 235 0.042881 ACCCCTTAGTCCAGGACTCC 59.957 60.000 26.42 0.00 42.40 3.85
235 236 0.691413 CCCCTTAGTCCAGGACTCCC 60.691 65.000 26.42 0.00 42.40 4.30
236 237 0.340208 CCCTTAGTCCAGGACTCCCT 59.660 60.000 26.42 4.72 42.40 4.20
237 238 1.689892 CCCTTAGTCCAGGACTCCCTC 60.690 61.905 26.42 0.00 42.40 4.30
238 239 1.007238 CCTTAGTCCAGGACTCCCTCA 59.993 57.143 26.42 5.02 42.40 3.86
239 240 2.104170 CTTAGTCCAGGACTCCCTCAC 58.896 57.143 26.42 0.00 42.40 3.51
240 241 0.335361 TAGTCCAGGACTCCCTCACC 59.665 60.000 26.42 0.00 42.40 4.02
241 242 1.990614 GTCCAGGACTCCCTCACCC 60.991 68.421 12.94 0.00 42.02 4.61
242 243 2.122729 CCAGGACTCCCTCACCCA 59.877 66.667 0.00 0.00 42.02 4.51
243 244 2.294078 CCAGGACTCCCTCACCCAC 61.294 68.421 0.00 0.00 42.02 4.61
244 245 2.122954 AGGACTCCCTCACCCACC 59.877 66.667 0.00 0.00 38.86 4.61
245 246 2.122954 GGACTCCCTCACCCACCT 59.877 66.667 0.00 0.00 0.00 4.00
246 247 1.990614 GGACTCCCTCACCCACCTC 60.991 68.421 0.00 0.00 0.00 3.85
247 248 1.990614 GACTCCCTCACCCACCTCC 60.991 68.421 0.00 0.00 0.00 4.30
248 249 2.452114 CTCCCTCACCCACCTCCT 59.548 66.667 0.00 0.00 0.00 3.69
249 250 1.687493 CTCCCTCACCCACCTCCTC 60.687 68.421 0.00 0.00 0.00 3.71
250 251 2.689034 CCCTCACCCACCTCCTCC 60.689 72.222 0.00 0.00 0.00 4.30
251 252 2.689034 CCTCACCCACCTCCTCCC 60.689 72.222 0.00 0.00 0.00 4.30
252 253 2.452114 CTCACCCACCTCCTCCCT 59.548 66.667 0.00 0.00 0.00 4.20
253 254 1.229658 CTCACCCACCTCCTCCCTT 60.230 63.158 0.00 0.00 0.00 3.95
254 255 1.229529 TCACCCACCTCCTCCCTTC 60.230 63.158 0.00 0.00 0.00 3.46
255 256 2.125225 ACCCACCTCCTCCCTTCC 59.875 66.667 0.00 0.00 0.00 3.46
256 257 3.083997 CCCACCTCCTCCCTTCCG 61.084 72.222 0.00 0.00 0.00 4.30
257 258 2.038975 CCACCTCCTCCCTTCCGA 59.961 66.667 0.00 0.00 0.00 4.55
258 259 2.060980 CCACCTCCTCCCTTCCGAG 61.061 68.421 0.00 0.00 0.00 4.63
263 264 3.787001 CCTCCCTTCCGAGGTGGC 61.787 72.222 0.00 0.00 43.94 5.01
264 265 4.148825 CTCCCTTCCGAGGTGGCG 62.149 72.222 0.00 0.00 41.85 5.69
297 298 2.104170 GATCTATGGATCCGAGGACCC 58.896 57.143 7.39 0.00 41.70 4.46
298 299 0.114560 TCTATGGATCCGAGGACCCC 59.885 60.000 7.39 2.97 0.00 4.95
299 300 0.115349 CTATGGATCCGAGGACCCCT 59.885 60.000 7.39 0.00 36.03 4.79
300 301 0.566176 TATGGATCCGAGGACCCCTT 59.434 55.000 7.39 3.57 31.76 3.95
301 302 0.566176 ATGGATCCGAGGACCCCTTA 59.434 55.000 7.39 0.00 31.76 2.69
302 303 0.105658 TGGATCCGAGGACCCCTTAG 60.106 60.000 7.39 0.00 31.76 2.18
303 304 0.105607 GGATCCGAGGACCCCTTAGT 60.106 60.000 0.00 0.00 31.76 2.24
304 305 1.330234 GATCCGAGGACCCCTTAGTC 58.670 60.000 0.00 0.00 31.76 2.59
311 312 3.713867 GACCCCTTAGTCCAGGACT 57.286 57.895 25.92 25.92 45.54 3.85
312 313 1.954035 GACCCCTTAGTCCAGGACTT 58.046 55.000 27.73 8.27 40.28 3.01
313 314 1.832366 GACCCCTTAGTCCAGGACTTC 59.168 57.143 27.73 13.74 40.28 3.01
314 315 1.205055 CCCCTTAGTCCAGGACTTCC 58.795 60.000 27.73 0.00 40.28 3.46
316 317 2.112190 CCCTTAGTCCAGGACTTCCTC 58.888 57.143 27.73 0.00 46.65 3.71
317 318 2.559931 CCCTTAGTCCAGGACTTCCTCA 60.560 54.545 27.73 6.14 46.65 3.86
318 319 3.379452 CCTTAGTCCAGGACTTCCTCAT 58.621 50.000 27.73 3.85 46.65 2.90
319 320 3.386402 CCTTAGTCCAGGACTTCCTCATC 59.614 52.174 27.73 0.00 46.65 2.92
320 321 2.938428 AGTCCAGGACTTCCTCATCT 57.062 50.000 17.31 0.00 46.65 2.90
321 322 3.197927 AGTCCAGGACTTCCTCATCTT 57.802 47.619 17.31 0.00 46.65 2.40
322 323 3.103742 AGTCCAGGACTTCCTCATCTTC 58.896 50.000 17.31 0.00 46.65 2.87
323 324 2.103373 TCCAGGACTTCCTCATCTTCG 58.897 52.381 0.00 0.00 46.65 3.79
324 325 2.103373 CCAGGACTTCCTCATCTTCGA 58.897 52.381 0.00 0.00 46.65 3.71
325 326 2.497675 CCAGGACTTCCTCATCTTCGAA 59.502 50.000 0.00 0.00 46.65 3.71
326 327 3.133721 CCAGGACTTCCTCATCTTCGAAT 59.866 47.826 0.00 0.00 46.65 3.34
327 328 4.367450 CAGGACTTCCTCATCTTCGAATC 58.633 47.826 0.00 0.00 46.65 2.52
328 329 3.386402 AGGACTTCCTCATCTTCGAATCC 59.614 47.826 0.00 0.00 44.77 3.01
329 330 3.386402 GGACTTCCTCATCTTCGAATCCT 59.614 47.826 0.00 0.00 0.00 3.24
330 331 4.367450 GACTTCCTCATCTTCGAATCCTG 58.633 47.826 0.00 0.00 0.00 3.86
331 332 4.026744 ACTTCCTCATCTTCGAATCCTGA 58.973 43.478 0.00 1.38 0.00 3.86
332 333 4.653341 ACTTCCTCATCTTCGAATCCTGAT 59.347 41.667 0.00 0.00 0.00 2.90
333 334 4.862902 TCCTCATCTTCGAATCCTGATC 57.137 45.455 0.00 0.00 0.00 2.92
334 335 4.478203 TCCTCATCTTCGAATCCTGATCT 58.522 43.478 0.00 0.00 0.00 2.75
335 336 4.280425 TCCTCATCTTCGAATCCTGATCTG 59.720 45.833 0.00 0.00 0.00 2.90
336 337 4.558178 CTCATCTTCGAATCCTGATCTGG 58.442 47.826 12.30 12.30 0.00 3.86
337 338 2.898729 TCTTCGAATCCTGATCTGGC 57.101 50.000 13.60 0.00 0.00 4.85
338 339 1.067669 TCTTCGAATCCTGATCTGGCG 59.932 52.381 13.60 11.44 0.00 5.69
339 340 0.104855 TTCGAATCCTGATCTGGCGG 59.895 55.000 13.60 3.33 0.00 6.13
340 341 1.958205 CGAATCCTGATCTGGCGGC 60.958 63.158 13.60 0.00 0.00 6.53
341 342 1.449353 GAATCCTGATCTGGCGGCT 59.551 57.895 13.60 0.00 0.00 5.52
342 343 0.681733 GAATCCTGATCTGGCGGCTA 59.318 55.000 13.60 0.00 0.00 3.93
343 344 1.277557 GAATCCTGATCTGGCGGCTAT 59.722 52.381 13.60 3.53 0.00 2.97
344 345 0.612229 ATCCTGATCTGGCGGCTATG 59.388 55.000 13.60 0.32 0.00 2.23
345 346 0.760567 TCCTGATCTGGCGGCTATGT 60.761 55.000 13.60 0.00 0.00 2.29
346 347 0.602106 CCTGATCTGGCGGCTATGTG 60.602 60.000 11.43 0.00 0.00 3.21
347 348 0.390492 CTGATCTGGCGGCTATGTGA 59.610 55.000 11.43 1.17 0.00 3.58
348 349 0.104855 TGATCTGGCGGCTATGTGAC 59.895 55.000 11.43 0.00 0.00 3.67
349 350 0.390860 GATCTGGCGGCTATGTGACT 59.609 55.000 11.43 0.00 0.00 3.41
350 351 0.105593 ATCTGGCGGCTATGTGACTG 59.894 55.000 11.43 0.00 0.00 3.51
351 352 2.125147 TGGCGGCTATGTGACTGC 60.125 61.111 11.43 0.00 0.00 4.40
352 353 2.187946 GGCGGCTATGTGACTGCT 59.812 61.111 0.00 0.00 0.00 4.24
353 354 1.884926 GGCGGCTATGTGACTGCTC 60.885 63.158 0.00 0.00 0.00 4.26
354 355 2.233654 GCGGCTATGTGACTGCTCG 61.234 63.158 0.00 0.00 0.00 5.03
355 356 1.589993 CGGCTATGTGACTGCTCGG 60.590 63.158 0.00 0.00 0.00 4.63
356 357 1.816537 GGCTATGTGACTGCTCGGA 59.183 57.895 0.00 0.00 0.00 4.55
357 358 0.390860 GGCTATGTGACTGCTCGGAT 59.609 55.000 0.00 0.00 0.00 4.18
358 359 1.604185 GGCTATGTGACTGCTCGGATC 60.604 57.143 0.00 0.00 0.00 3.36
359 360 1.604185 GCTATGTGACTGCTCGGATCC 60.604 57.143 0.00 0.00 0.00 3.36
360 361 0.668535 TATGTGACTGCTCGGATCCG 59.331 55.000 28.62 28.62 41.35 4.18
361 362 2.021068 ATGTGACTGCTCGGATCCGG 62.021 60.000 32.79 23.49 40.25 5.14
362 363 3.147595 TGACTGCTCGGATCCGGG 61.148 66.667 32.79 31.58 43.79 5.73
368 369 2.657237 CTCGGATCCGGGCCATAC 59.343 66.667 32.79 0.00 40.25 2.39
369 370 3.282745 CTCGGATCCGGGCCATACG 62.283 68.421 32.79 1.60 40.25 3.06
370 371 3.299977 CGGATCCGGGCCATACGA 61.300 66.667 26.95 0.00 35.56 3.43
371 372 2.863346 CGGATCCGGGCCATACGAA 61.863 63.158 26.95 0.00 35.56 3.85
372 373 1.448497 GGATCCGGGCCATACGAAA 59.552 57.895 4.39 0.00 0.00 3.46
373 374 0.036306 GGATCCGGGCCATACGAAAT 59.964 55.000 4.39 0.00 0.00 2.17
374 375 1.439679 GATCCGGGCCATACGAAATC 58.560 55.000 4.39 2.53 0.00 2.17
375 376 0.036306 ATCCGGGCCATACGAAATCC 59.964 55.000 4.39 0.00 0.00 3.01
376 377 1.147376 CCGGGCCATACGAAATCCA 59.853 57.895 4.39 0.00 0.00 3.41
377 378 0.250727 CCGGGCCATACGAAATCCAT 60.251 55.000 4.39 0.00 0.00 3.41
378 379 0.874390 CGGGCCATACGAAATCCATG 59.126 55.000 4.39 0.00 0.00 3.66
379 380 0.598065 GGGCCATACGAAATCCATGC 59.402 55.000 4.39 0.00 0.00 4.06
380 381 0.598065 GGCCATACGAAATCCATGCC 59.402 55.000 0.00 0.00 0.00 4.40
381 382 0.598065 GCCATACGAAATCCATGCCC 59.402 55.000 0.00 0.00 0.00 5.36
382 383 0.874390 CCATACGAAATCCATGCCCG 59.126 55.000 0.00 0.00 0.00 6.13
383 384 0.874390 CATACGAAATCCATGCCCGG 59.126 55.000 0.00 0.00 0.00 5.73
384 385 0.889186 ATACGAAATCCATGCCCGGC 60.889 55.000 1.04 1.04 0.00 6.13
385 386 1.978455 TACGAAATCCATGCCCGGCT 61.978 55.000 11.61 0.00 0.00 5.52
386 387 2.120909 CGAAATCCATGCCCGGCTT 61.121 57.895 11.61 0.47 0.00 4.35
387 388 1.438814 GAAATCCATGCCCGGCTTG 59.561 57.895 16.67 16.67 34.20 4.01
388 389 2.633681 GAAATCCATGCCCGGCTTGC 62.634 60.000 17.91 0.00 33.27 4.01
389 390 3.667217 AATCCATGCCCGGCTTGCT 62.667 57.895 17.91 6.33 33.27 3.91
392 393 2.831742 CATGCCCGGCTTGCTGAT 60.832 61.111 11.61 0.00 0.00 2.90
393 394 2.831742 ATGCCCGGCTTGCTGATG 60.832 61.111 11.61 0.00 0.00 3.07
414 415 4.152625 GCAGCGGCGACACATGTC 62.153 66.667 12.98 1.70 41.47 3.06
422 423 2.357034 GACACATGTCGGTGCCGT 60.357 61.111 10.60 0.00 42.55 5.68
423 424 1.959226 GACACATGTCGGTGCCGTT 60.959 57.895 10.60 0.00 42.55 4.44
424 425 1.503818 GACACATGTCGGTGCCGTTT 61.504 55.000 10.60 0.00 42.55 3.60
425 426 1.206578 CACATGTCGGTGCCGTTTC 59.793 57.895 10.60 3.88 40.74 2.78
426 427 1.964373 ACATGTCGGTGCCGTTTCC 60.964 57.895 10.60 0.00 40.74 3.13
427 428 2.359478 ATGTCGGTGCCGTTTCCC 60.359 61.111 10.60 0.00 40.74 3.97
428 429 2.890766 ATGTCGGTGCCGTTTCCCT 61.891 57.895 10.60 0.00 40.74 4.20
429 430 2.281276 GTCGGTGCCGTTTCCCTT 60.281 61.111 10.60 0.00 40.74 3.95
430 431 2.031465 TCGGTGCCGTTTCCCTTC 59.969 61.111 10.60 0.00 40.74 3.46
431 432 2.032071 CGGTGCCGTTTCCCTTCT 59.968 61.111 1.93 0.00 34.35 2.85
432 433 1.599797 CGGTGCCGTTTCCCTTCTT 60.600 57.895 1.93 0.00 34.35 2.52
433 434 1.852067 CGGTGCCGTTTCCCTTCTTG 61.852 60.000 1.93 0.00 34.35 3.02
434 435 1.524008 GGTGCCGTTTCCCTTCTTGG 61.524 60.000 0.00 0.00 0.00 3.61
435 436 0.536460 GTGCCGTTTCCCTTCTTGGA 60.536 55.000 0.00 0.00 38.35 3.53
436 437 0.250727 TGCCGTTTCCCTTCTTGGAG 60.251 55.000 0.00 0.00 38.35 3.86
437 438 0.960861 GCCGTTTCCCTTCTTGGAGG 60.961 60.000 0.00 0.00 38.35 4.30
438 439 0.960861 CCGTTTCCCTTCTTGGAGGC 60.961 60.000 0.00 0.00 38.35 4.70
439 440 1.298859 CGTTTCCCTTCTTGGAGGCG 61.299 60.000 0.00 0.00 38.35 5.52
440 441 0.250770 GTTTCCCTTCTTGGAGGCGT 60.251 55.000 0.00 0.00 38.35 5.68
441 442 0.476771 TTTCCCTTCTTGGAGGCGTT 59.523 50.000 0.00 0.00 38.35 4.84
442 443 0.250727 TTCCCTTCTTGGAGGCGTTG 60.251 55.000 0.00 0.00 38.35 4.10
443 444 2.335712 CCCTTCTTGGAGGCGTTGC 61.336 63.158 0.00 0.00 38.35 4.17
455 456 3.585856 CGTTGCCACGGCCTTTAT 58.414 55.556 5.42 0.00 43.16 1.40
456 457 1.427819 CGTTGCCACGGCCTTTATC 59.572 57.895 5.42 0.00 43.16 1.75
457 458 1.807226 GTTGCCACGGCCTTTATCC 59.193 57.895 5.42 0.00 41.09 2.59
465 466 4.564110 GCCTTTATCCGCGCCCCT 62.564 66.667 0.00 0.00 0.00 4.79
466 467 2.280865 CCTTTATCCGCGCCCCTC 60.281 66.667 0.00 0.00 0.00 4.30
467 468 2.808206 CCTTTATCCGCGCCCCTCT 61.808 63.158 0.00 0.00 0.00 3.69
468 469 1.146263 CTTTATCCGCGCCCCTCTT 59.854 57.895 0.00 0.00 0.00 2.85
469 470 0.880718 CTTTATCCGCGCCCCTCTTC 60.881 60.000 0.00 0.00 0.00 2.87
470 471 1.618876 TTTATCCGCGCCCCTCTTCA 61.619 55.000 0.00 0.00 0.00 3.02
471 472 1.618876 TTATCCGCGCCCCTCTTCAA 61.619 55.000 0.00 0.00 0.00 2.69
472 473 2.028125 TATCCGCGCCCCTCTTCAAG 62.028 60.000 0.00 0.00 0.00 3.02
486 487 5.538067 CTCTTCAAGGATCGAGGAAAAAC 57.462 43.478 0.00 0.00 0.00 2.43
487 488 3.994392 TCTTCAAGGATCGAGGAAAAACG 59.006 43.478 0.00 0.00 0.00 3.60
488 489 2.073816 TCAAGGATCGAGGAAAAACGC 58.926 47.619 0.00 0.00 0.00 4.84
489 490 1.804151 CAAGGATCGAGGAAAAACGCA 59.196 47.619 0.00 0.00 0.00 5.24
490 491 1.726853 AGGATCGAGGAAAAACGCAG 58.273 50.000 0.00 0.00 0.00 5.18
491 492 0.727398 GGATCGAGGAAAAACGCAGG 59.273 55.000 0.00 0.00 0.00 4.85
492 493 1.439679 GATCGAGGAAAAACGCAGGT 58.560 50.000 0.00 0.00 0.00 4.00
493 494 1.393883 GATCGAGGAAAAACGCAGGTC 59.606 52.381 0.00 0.00 0.00 3.85
494 495 0.601841 TCGAGGAAAAACGCAGGTCC 60.602 55.000 0.00 0.00 0.00 4.46
495 496 1.866925 GAGGAAAAACGCAGGTCCG 59.133 57.895 0.00 0.00 35.19 4.79
496 497 1.574702 GAGGAAAAACGCAGGTCCGG 61.575 60.000 0.00 0.00 35.19 5.14
497 498 2.254350 GAAAAACGCAGGTCCGGC 59.746 61.111 3.55 3.55 0.00 6.13
498 499 2.203294 AAAAACGCAGGTCCGGCT 60.203 55.556 12.42 0.00 0.00 5.52
499 500 2.183858 GAAAAACGCAGGTCCGGCTC 62.184 60.000 12.42 0.00 0.00 4.70
500 501 2.676163 AAAAACGCAGGTCCGGCTCT 62.676 55.000 12.42 0.00 0.00 4.09
501 502 3.591254 AAACGCAGGTCCGGCTCTC 62.591 63.158 12.42 0.00 0.00 3.20
542 543 4.065281 CGGCGTCGTTCCCCTTCT 62.065 66.667 0.00 0.00 0.00 2.85
543 544 2.125633 GGCGTCGTTCCCCTTCTC 60.126 66.667 0.00 0.00 0.00 2.87
544 545 2.506438 GCGTCGTTCCCCTTCTCG 60.506 66.667 0.00 0.00 0.00 4.04
545 546 2.986306 GCGTCGTTCCCCTTCTCGA 61.986 63.158 0.00 0.00 0.00 4.04
546 547 1.582968 CGTCGTTCCCCTTCTCGAA 59.417 57.895 0.00 0.00 34.23 3.71
547 548 0.456312 CGTCGTTCCCCTTCTCGAAG 60.456 60.000 0.00 0.00 38.14 3.79
558 559 3.320673 CTTCTCGAAGGTAGCAGGTTT 57.679 47.619 0.00 0.00 34.87 3.27
559 560 3.665190 CTTCTCGAAGGTAGCAGGTTTT 58.335 45.455 0.00 0.00 34.87 2.43
560 561 3.764237 TCTCGAAGGTAGCAGGTTTTT 57.236 42.857 0.00 0.00 0.00 1.94
594 595 9.425577 AGTTAGACAGATTTAAGCTAGTTTGAC 57.574 33.333 1.54 0.00 0.00 3.18
595 596 9.425577 GTTAGACAGATTTAAGCTAGTTTGACT 57.574 33.333 1.54 0.00 0.00 3.41
596 597 9.998106 TTAGACAGATTTAAGCTAGTTTGACTT 57.002 29.630 1.54 0.00 0.00 3.01
597 598 8.316640 AGACAGATTTAAGCTAGTTTGACTTG 57.683 34.615 1.54 0.00 0.00 3.16
598 599 7.389053 AGACAGATTTAAGCTAGTTTGACTTGG 59.611 37.037 1.54 0.00 0.00 3.61
599 600 6.431234 ACAGATTTAAGCTAGTTTGACTTGGG 59.569 38.462 1.54 0.00 0.00 4.12
600 601 6.655003 CAGATTTAAGCTAGTTTGACTTGGGA 59.345 38.462 1.54 0.00 0.00 4.37
601 602 7.337942 CAGATTTAAGCTAGTTTGACTTGGGAT 59.662 37.037 1.54 0.00 0.00 3.85
602 603 6.817765 TTTAAGCTAGTTTGACTTGGGATG 57.182 37.500 1.54 0.00 0.00 3.51
603 604 4.640771 AAGCTAGTTTGACTTGGGATGA 57.359 40.909 0.00 0.00 0.00 2.92
604 605 4.640771 AGCTAGTTTGACTTGGGATGAA 57.359 40.909 0.00 0.00 0.00 2.57
605 606 4.985538 AGCTAGTTTGACTTGGGATGAAA 58.014 39.130 0.00 0.00 0.00 2.69
606 607 4.762251 AGCTAGTTTGACTTGGGATGAAAC 59.238 41.667 0.00 0.00 0.00 2.78
607 608 4.762251 GCTAGTTTGACTTGGGATGAAACT 59.238 41.667 0.00 0.00 39.54 2.66
608 609 5.335191 GCTAGTTTGACTTGGGATGAAACTG 60.335 44.000 0.00 0.00 37.42 3.16
609 610 4.792068 AGTTTGACTTGGGATGAAACTGA 58.208 39.130 0.00 0.00 35.92 3.41
610 611 5.200483 AGTTTGACTTGGGATGAAACTGAA 58.800 37.500 0.00 0.00 35.92 3.02
611 612 5.656416 AGTTTGACTTGGGATGAAACTGAAA 59.344 36.000 0.00 0.00 35.92 2.69
612 613 5.514274 TTGACTTGGGATGAAACTGAAAC 57.486 39.130 0.00 0.00 0.00 2.78
613 614 4.792068 TGACTTGGGATGAAACTGAAACT 58.208 39.130 0.00 0.00 0.00 2.66
614 615 5.200483 TGACTTGGGATGAAACTGAAACTT 58.800 37.500 0.00 0.00 0.00 2.66
615 616 5.299279 TGACTTGGGATGAAACTGAAACTTC 59.701 40.000 0.00 0.00 0.00 3.01
616 617 4.275936 ACTTGGGATGAAACTGAAACTTCG 59.724 41.667 0.00 0.00 0.00 3.79
617 618 4.079980 TGGGATGAAACTGAAACTTCGA 57.920 40.909 0.00 0.00 0.00 3.71
618 619 4.651778 TGGGATGAAACTGAAACTTCGAT 58.348 39.130 0.00 0.00 0.00 3.59
619 620 5.070001 TGGGATGAAACTGAAACTTCGATT 58.930 37.500 0.00 0.00 0.00 3.34
620 621 6.234920 TGGGATGAAACTGAAACTTCGATTA 58.765 36.000 0.00 0.00 0.00 1.75
621 622 6.884295 TGGGATGAAACTGAAACTTCGATTAT 59.116 34.615 0.00 0.00 0.00 1.28
622 623 7.065803 TGGGATGAAACTGAAACTTCGATTATC 59.934 37.037 0.00 0.00 0.00 1.75
623 624 7.281100 GGGATGAAACTGAAACTTCGATTATCT 59.719 37.037 0.00 0.00 0.00 1.98
624 625 8.669243 GGATGAAACTGAAACTTCGATTATCTT 58.331 33.333 0.00 0.00 0.00 2.40
625 626 9.483062 GATGAAACTGAAACTTCGATTATCTTG 57.517 33.333 0.00 0.00 0.00 3.02
626 627 7.806690 TGAAACTGAAACTTCGATTATCTTGG 58.193 34.615 0.00 0.00 0.00 3.61
627 628 7.444183 TGAAACTGAAACTTCGATTATCTTGGT 59.556 33.333 0.00 0.00 0.00 3.67
628 629 7.745620 AACTGAAACTTCGATTATCTTGGTT 57.254 32.000 0.00 0.00 0.00 3.67
629 630 7.133891 ACTGAAACTTCGATTATCTTGGTTG 57.866 36.000 0.00 0.00 0.00 3.77
630 631 6.149474 ACTGAAACTTCGATTATCTTGGTTGG 59.851 38.462 0.00 0.00 0.00 3.77
631 632 6.001460 TGAAACTTCGATTATCTTGGTTGGT 58.999 36.000 0.00 0.00 0.00 3.67
632 633 7.162761 TGAAACTTCGATTATCTTGGTTGGTA 58.837 34.615 0.00 0.00 0.00 3.25
633 634 6.980051 AACTTCGATTATCTTGGTTGGTAC 57.020 37.500 0.00 0.00 0.00 3.34
634 635 6.045072 ACTTCGATTATCTTGGTTGGTACA 57.955 37.500 0.00 0.00 0.00 2.90
651 652 0.842467 ACAAAGGGAGGGAGGGAGTG 60.842 60.000 0.00 0.00 0.00 3.51
723 724 5.163602 GGATAGGATAGGATTAGAGCACACG 60.164 48.000 0.00 0.00 0.00 4.49
740 741 3.305773 GCTCGCGTCGATCGACAC 61.306 66.667 38.62 31.24 44.77 3.67
747 748 3.872728 TCGATCGACACGAGCCCG 61.873 66.667 15.15 5.68 39.19 6.13
783 784 5.070001 CCTAGTGGACTTTTGACAAATCCA 58.930 41.667 16.09 16.09 37.11 3.41
785 786 5.712152 AGTGGACTTTTGACAAATCCATC 57.288 39.130 20.80 15.54 41.38 3.51
786 787 4.524328 AGTGGACTTTTGACAAATCCATCC 59.476 41.667 20.80 15.59 41.38 3.51
794 795 3.599343 TGACAAATCCATCCTCTTGTCG 58.401 45.455 8.71 0.00 46.87 4.35
802 803 0.537188 ATCCTCTTGTCGCGATTGGT 59.463 50.000 14.06 0.00 0.00 3.67
807 808 0.673644 CTTGTCGCGATTGGTTCCCT 60.674 55.000 14.06 0.00 0.00 4.20
834 849 1.826385 CCCTGTAGCAACCTTTCCAG 58.174 55.000 0.00 0.00 0.00 3.86
989 1031 2.487265 CCCTCCATACAAAATCCCTCCG 60.487 54.545 0.00 0.00 0.00 4.63
990 1032 2.222027 CTCCATACAAAATCCCTCCGC 58.778 52.381 0.00 0.00 0.00 5.54
991 1033 1.843851 TCCATACAAAATCCCTCCGCT 59.156 47.619 0.00 0.00 0.00 5.52
992 1034 2.158813 TCCATACAAAATCCCTCCGCTC 60.159 50.000 0.00 0.00 0.00 5.03
1004 1046 2.202797 CCGCTCACCCATCGACAG 60.203 66.667 0.00 0.00 0.00 3.51
1543 1855 1.878656 CGTCCTCCTCGCCAACTTCT 61.879 60.000 0.00 0.00 0.00 2.85
1570 1882 1.609783 CTCGCCTTCCCCTCCAATT 59.390 57.895 0.00 0.00 0.00 2.32
1576 1888 1.926426 CTTCCCCTCCAATTCGGCCT 61.926 60.000 0.00 0.00 33.14 5.19
1577 1889 1.921869 TTCCCCTCCAATTCGGCCTC 61.922 60.000 0.00 0.00 33.14 4.70
1579 1891 2.378634 CCCTCCAATTCGGCCTCCT 61.379 63.158 0.00 0.00 33.14 3.69
1585 1897 1.003573 AATTCGGCCTCCTCCTCCT 59.996 57.895 0.00 0.00 0.00 3.69
1586 1898 1.051556 AATTCGGCCTCCTCCTCCTC 61.052 60.000 0.00 0.00 0.00 3.71
1587 1899 2.243774 ATTCGGCCTCCTCCTCCTCA 62.244 60.000 0.00 0.00 0.00 3.86
1910 2222 4.724697 CTTCAACGCCGCGCACAG 62.725 66.667 13.88 0.00 0.00 3.66
2095 2407 3.231298 CGGAGGAGGGGGATGAAC 58.769 66.667 0.00 0.00 0.00 3.18
2102 2417 1.584724 GAGGGGGATGAACCAGAGAA 58.415 55.000 0.00 0.00 41.20 2.87
2309 2642 8.135382 AGTTTGTATAGTGGTGAGTATTCTGT 57.865 34.615 0.00 0.00 0.00 3.41
2942 4746 1.562672 AACCCGGATCCCCTTCACTG 61.563 60.000 0.73 0.00 0.00 3.66
2974 4778 3.797256 GCACTACTCCATAGCTGTAAACG 59.203 47.826 0.00 0.00 33.73 3.60
3163 4967 1.609932 GCTTGACATCACAATGCACG 58.390 50.000 0.00 0.00 36.26 5.34
3170 4974 2.615447 ACATCACAATGCACGATCCATC 59.385 45.455 0.00 0.00 36.26 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.723405 GGAGGGTTTAGACTTCTAGGGTTTA 59.277 44.000 0.00 0.00 0.00 2.01
2 3 4.102598 GGAGGGTTTAGACTTCTAGGGTT 58.897 47.826 0.00 0.00 0.00 4.11
4 5 2.694109 CGGAGGGTTTAGACTTCTAGGG 59.306 54.545 0.00 0.00 0.00 3.53
25 26 3.690475 CCCCCGGTGTCTATATAAACC 57.310 52.381 0.00 0.68 0.00 3.27
42 43 1.660242 TTGTACAACCCTAGTCCCCC 58.340 55.000 3.59 0.00 0.00 5.40
43 44 2.641321 ACTTTGTACAACCCTAGTCCCC 59.359 50.000 8.07 0.00 0.00 4.81
44 45 3.615834 CGACTTTGTACAACCCTAGTCCC 60.616 52.174 23.15 8.72 30.79 4.46
45 46 3.582780 CGACTTTGTACAACCCTAGTCC 58.417 50.000 23.15 11.91 30.79 3.85
46 47 3.006217 ACCGACTTTGTACAACCCTAGTC 59.994 47.826 20.86 20.86 0.00 2.59
47 48 2.967887 ACCGACTTTGTACAACCCTAGT 59.032 45.455 8.07 9.11 0.00 2.57
48 49 3.672767 ACCGACTTTGTACAACCCTAG 57.327 47.619 8.07 5.62 0.00 3.02
49 50 4.343526 TGTAACCGACTTTGTACAACCCTA 59.656 41.667 8.07 0.00 0.00 3.53
50 51 3.134442 TGTAACCGACTTTGTACAACCCT 59.866 43.478 8.07 0.00 0.00 4.34
51 52 3.465871 TGTAACCGACTTTGTACAACCC 58.534 45.455 8.07 0.00 0.00 4.11
52 53 4.370917 TCTGTAACCGACTTTGTACAACC 58.629 43.478 8.07 0.00 0.00 3.77
53 54 5.284079 TCTCTGTAACCGACTTTGTACAAC 58.716 41.667 8.07 0.00 0.00 3.32
54 55 5.518848 TCTCTGTAACCGACTTTGTACAA 57.481 39.130 3.59 3.59 0.00 2.41
55 56 5.518848 TTCTCTGTAACCGACTTTGTACA 57.481 39.130 0.00 0.00 0.00 2.90
56 57 5.404667 CCTTTCTCTGTAACCGACTTTGTAC 59.595 44.000 0.00 0.00 0.00 2.90
57 58 5.302568 TCCTTTCTCTGTAACCGACTTTGTA 59.697 40.000 0.00 0.00 0.00 2.41
58 59 4.100498 TCCTTTCTCTGTAACCGACTTTGT 59.900 41.667 0.00 0.00 0.00 2.83
59 60 4.628074 TCCTTTCTCTGTAACCGACTTTG 58.372 43.478 0.00 0.00 0.00 2.77
60 61 4.950205 TCCTTTCTCTGTAACCGACTTT 57.050 40.909 0.00 0.00 0.00 2.66
61 62 4.950205 TTCCTTTCTCTGTAACCGACTT 57.050 40.909 0.00 0.00 0.00 3.01
62 63 4.773149 AGATTCCTTTCTCTGTAACCGACT 59.227 41.667 0.00 0.00 0.00 4.18
63 64 5.074584 AGATTCCTTTCTCTGTAACCGAC 57.925 43.478 0.00 0.00 0.00 4.79
64 65 5.713389 TGTAGATTCCTTTCTCTGTAACCGA 59.287 40.000 0.00 0.00 0.00 4.69
65 66 5.962433 TGTAGATTCCTTTCTCTGTAACCG 58.038 41.667 0.00 0.00 0.00 4.44
66 67 9.699703 GATATGTAGATTCCTTTCTCTGTAACC 57.300 37.037 0.00 0.00 0.00 2.85
67 68 9.699703 GGATATGTAGATTCCTTTCTCTGTAAC 57.300 37.037 0.00 0.00 0.00 2.50
68 69 8.577296 CGGATATGTAGATTCCTTTCTCTGTAA 58.423 37.037 0.00 0.00 0.00 2.41
69 70 7.942894 TCGGATATGTAGATTCCTTTCTCTGTA 59.057 37.037 0.00 0.00 0.00 2.74
70 71 6.778069 TCGGATATGTAGATTCCTTTCTCTGT 59.222 38.462 0.00 0.00 0.00 3.41
71 72 7.220741 TCGGATATGTAGATTCCTTTCTCTG 57.779 40.000 0.00 0.00 0.00 3.35
72 73 7.841282 TTCGGATATGTAGATTCCTTTCTCT 57.159 36.000 0.00 0.00 0.00 3.10
73 74 7.486551 CGATTCGGATATGTAGATTCCTTTCTC 59.513 40.741 0.00 0.00 0.00 2.87
74 75 7.316640 CGATTCGGATATGTAGATTCCTTTCT 58.683 38.462 0.00 0.00 0.00 2.52
75 76 6.035112 GCGATTCGGATATGTAGATTCCTTTC 59.965 42.308 8.34 0.00 0.00 2.62
76 77 5.869888 GCGATTCGGATATGTAGATTCCTTT 59.130 40.000 8.34 0.00 0.00 3.11
77 78 5.411781 GCGATTCGGATATGTAGATTCCTT 58.588 41.667 8.34 0.00 0.00 3.36
78 79 4.142138 GGCGATTCGGATATGTAGATTCCT 60.142 45.833 8.34 0.00 0.00 3.36
79 80 4.113354 GGCGATTCGGATATGTAGATTCC 58.887 47.826 8.34 0.00 0.00 3.01
80 81 4.744570 TGGCGATTCGGATATGTAGATTC 58.255 43.478 8.34 0.00 0.00 2.52
81 82 4.801330 TGGCGATTCGGATATGTAGATT 57.199 40.909 8.34 0.00 0.00 2.40
82 83 4.748892 CTTGGCGATTCGGATATGTAGAT 58.251 43.478 8.34 0.00 0.00 1.98
83 84 3.614150 GCTTGGCGATTCGGATATGTAGA 60.614 47.826 8.34 0.00 0.00 2.59
84 85 2.668457 GCTTGGCGATTCGGATATGTAG 59.332 50.000 8.34 0.00 0.00 2.74
85 86 2.299013 AGCTTGGCGATTCGGATATGTA 59.701 45.455 8.34 0.00 0.00 2.29
86 87 1.070758 AGCTTGGCGATTCGGATATGT 59.929 47.619 8.34 0.00 0.00 2.29
87 88 1.800805 AGCTTGGCGATTCGGATATG 58.199 50.000 8.34 0.00 0.00 1.78
88 89 2.146342 CAAGCTTGGCGATTCGGATAT 58.854 47.619 19.14 0.00 0.00 1.63
89 90 1.581934 CAAGCTTGGCGATTCGGATA 58.418 50.000 19.14 0.00 0.00 2.59
90 91 1.718757 GCAAGCTTGGCGATTCGGAT 61.719 55.000 27.10 0.00 0.00 4.18
91 92 2.398554 GCAAGCTTGGCGATTCGGA 61.399 57.895 27.10 0.00 0.00 4.55
92 93 2.100991 GCAAGCTTGGCGATTCGG 59.899 61.111 27.10 0.00 0.00 4.30
93 94 2.100991 GGCAAGCTTGGCGATTCG 59.899 61.111 33.68 4.49 43.97 3.34
100 101 2.956987 CGTGGAAGGCAAGCTTGG 59.043 61.111 27.10 9.80 0.00 3.61
109 110 1.801178 GACTCTTCTTTGCGTGGAAGG 59.199 52.381 10.83 6.15 39.30 3.46
110 111 1.801178 GGACTCTTCTTTGCGTGGAAG 59.199 52.381 6.16 6.16 39.94 3.46
111 112 1.542547 GGGACTCTTCTTTGCGTGGAA 60.543 52.381 0.00 0.00 0.00 3.53
112 113 0.034896 GGGACTCTTCTTTGCGTGGA 59.965 55.000 0.00 0.00 0.00 4.02
113 114 0.250295 TGGGACTCTTCTTTGCGTGG 60.250 55.000 0.00 0.00 0.00 4.94
114 115 1.734465 GATGGGACTCTTCTTTGCGTG 59.266 52.381 0.00 0.00 0.00 5.34
115 116 1.339151 GGATGGGACTCTTCTTTGCGT 60.339 52.381 0.00 0.00 0.00 5.24
116 117 1.373570 GGATGGGACTCTTCTTTGCG 58.626 55.000 0.00 0.00 0.00 4.85
117 118 1.373570 CGGATGGGACTCTTCTTTGC 58.626 55.000 0.00 0.00 0.00 3.68
118 119 1.555075 TCCGGATGGGACTCTTCTTTG 59.445 52.381 0.00 0.00 40.94 2.77
119 120 1.952621 TCCGGATGGGACTCTTCTTT 58.047 50.000 0.00 0.00 40.94 2.52
120 121 3.711849 TCCGGATGGGACTCTTCTT 57.288 52.632 0.00 0.00 40.94 2.52
130 131 4.935495 CGCCCCATGTCCGGATGG 62.935 72.222 16.07 16.07 42.45 3.51
131 132 3.399105 TTCGCCCCATGTCCGGATG 62.399 63.158 7.81 1.85 0.00 3.51
132 133 3.087253 TTCGCCCCATGTCCGGAT 61.087 61.111 7.81 0.00 0.00 4.18
133 134 3.781307 CTTCGCCCCATGTCCGGA 61.781 66.667 0.00 0.00 0.00 5.14
134 135 4.096003 ACTTCGCCCCATGTCCGG 62.096 66.667 0.00 0.00 0.00 5.14
135 136 2.511600 GACTTCGCCCCATGTCCG 60.512 66.667 0.00 0.00 0.00 4.79
136 137 0.744771 GAAGACTTCGCCCCATGTCC 60.745 60.000 0.00 0.00 0.00 4.02
137 138 0.250513 AGAAGACTTCGCCCCATGTC 59.749 55.000 9.53 0.00 34.02 3.06
138 139 1.568504 TAGAAGACTTCGCCCCATGT 58.431 50.000 9.53 0.00 34.02 3.21
139 140 2.366916 AGATAGAAGACTTCGCCCCATG 59.633 50.000 9.53 0.00 34.02 3.66
140 141 2.683768 AGATAGAAGACTTCGCCCCAT 58.316 47.619 9.53 0.27 34.02 4.00
141 142 2.160721 AGATAGAAGACTTCGCCCCA 57.839 50.000 9.53 0.00 34.02 4.96
142 143 2.168728 ACAAGATAGAAGACTTCGCCCC 59.831 50.000 9.53 1.49 34.02 5.80
143 144 3.528597 ACAAGATAGAAGACTTCGCCC 57.471 47.619 9.53 3.13 34.02 6.13
144 145 6.079424 AGATACAAGATAGAAGACTTCGCC 57.921 41.667 9.53 3.46 34.02 5.54
145 146 7.197017 TGAAGATACAAGATAGAAGACTTCGC 58.803 38.462 9.53 3.96 35.49 4.70
151 152 9.868160 TGGACTATGAAGATACAAGATAGAAGA 57.132 33.333 0.00 0.00 0.00 2.87
154 155 9.421399 TGTTGGACTATGAAGATACAAGATAGA 57.579 33.333 0.00 0.00 0.00 1.98
155 156 9.689976 CTGTTGGACTATGAAGATACAAGATAG 57.310 37.037 0.00 0.00 0.00 2.08
156 157 9.201989 ACTGTTGGACTATGAAGATACAAGATA 57.798 33.333 0.00 0.00 0.00 1.98
157 158 8.083828 ACTGTTGGACTATGAAGATACAAGAT 57.916 34.615 0.00 0.00 0.00 2.40
158 159 7.363880 GGACTGTTGGACTATGAAGATACAAGA 60.364 40.741 0.00 0.00 0.00 3.02
159 160 6.758886 GGACTGTTGGACTATGAAGATACAAG 59.241 42.308 0.00 0.00 0.00 3.16
160 161 6.627287 CGGACTGTTGGACTATGAAGATACAA 60.627 42.308 0.00 0.00 0.00 2.41
161 162 5.163550 CGGACTGTTGGACTATGAAGATACA 60.164 44.000 0.00 0.00 0.00 2.29
162 163 5.282510 CGGACTGTTGGACTATGAAGATAC 58.717 45.833 0.00 0.00 0.00 2.24
163 164 4.341235 CCGGACTGTTGGACTATGAAGATA 59.659 45.833 0.00 0.00 0.00 1.98
164 165 3.133003 CCGGACTGTTGGACTATGAAGAT 59.867 47.826 0.00 0.00 0.00 2.40
165 166 2.496070 CCGGACTGTTGGACTATGAAGA 59.504 50.000 0.00 0.00 0.00 2.87
166 167 2.893637 CCGGACTGTTGGACTATGAAG 58.106 52.381 0.00 0.00 0.00 3.02
167 168 1.066430 GCCGGACTGTTGGACTATGAA 60.066 52.381 5.05 0.00 0.00 2.57
168 169 0.535335 GCCGGACTGTTGGACTATGA 59.465 55.000 5.05 0.00 0.00 2.15
169 170 0.462047 GGCCGGACTGTTGGACTATG 60.462 60.000 5.05 0.00 0.00 2.23
170 171 0.907704 TGGCCGGACTGTTGGACTAT 60.908 55.000 9.82 0.00 33.02 2.12
171 172 1.122632 TTGGCCGGACTGTTGGACTA 61.123 55.000 9.82 0.00 33.02 2.59
172 173 1.990160 TTTGGCCGGACTGTTGGACT 61.990 55.000 9.82 0.00 33.02 3.85
173 174 1.515521 CTTTGGCCGGACTGTTGGAC 61.516 60.000 9.82 1.90 0.00 4.02
174 175 1.228124 CTTTGGCCGGACTGTTGGA 60.228 57.895 9.82 0.00 0.00 3.53
175 176 0.250553 TACTTTGGCCGGACTGTTGG 60.251 55.000 9.82 0.00 0.00 3.77
176 177 1.821216 ATACTTTGGCCGGACTGTTG 58.179 50.000 9.82 0.00 0.00 3.33
177 178 3.926058 ATATACTTTGGCCGGACTGTT 57.074 42.857 9.82 0.00 0.00 3.16
178 179 3.965347 ACTATATACTTTGGCCGGACTGT 59.035 43.478 9.82 7.70 0.00 3.55
179 180 4.557205 GACTATATACTTTGGCCGGACTG 58.443 47.826 9.82 0.54 0.00 3.51
180 181 3.577415 GGACTATATACTTTGGCCGGACT 59.423 47.826 9.82 0.00 0.00 3.85
181 182 3.613432 CGGACTATATACTTTGGCCGGAC 60.613 52.174 5.05 0.56 34.29 4.79
182 183 2.559668 CGGACTATATACTTTGGCCGGA 59.440 50.000 5.05 0.00 34.29 5.14
183 184 2.955614 CGGACTATATACTTTGGCCGG 58.044 52.381 6.17 0.00 34.29 6.13
184 185 2.929592 GCCGGACTATATACTTTGGCCG 60.930 54.545 5.05 6.96 35.24 6.13
185 186 2.302157 AGCCGGACTATATACTTTGGCC 59.698 50.000 5.05 0.00 42.14 5.36
186 187 3.244112 ACAGCCGGACTATATACTTTGGC 60.244 47.826 5.05 0.00 41.50 4.52
187 188 4.557205 GACAGCCGGACTATATACTTTGG 58.443 47.826 5.05 0.00 0.00 3.28
188 189 4.557205 GGACAGCCGGACTATATACTTTG 58.443 47.826 5.05 0.00 0.00 2.77
189 190 4.868314 GGACAGCCGGACTATATACTTT 57.132 45.455 5.05 0.00 0.00 2.66
204 205 1.677637 CTAAGGGGTCCTCGGACAGC 61.678 65.000 17.21 1.56 46.20 4.40
205 206 0.324460 ACTAAGGGGTCCTCGGACAG 60.324 60.000 17.21 8.32 46.20 3.51
206 207 0.324091 GACTAAGGGGTCCTCGGACA 60.324 60.000 17.21 0.00 46.20 4.02
207 208 2.502633 GACTAAGGGGTCCTCGGAC 58.497 63.158 7.57 7.57 43.87 4.79
214 215 1.487300 GAGTCCTGGACTAAGGGGTC 58.513 60.000 28.41 11.40 43.53 4.46
215 216 0.042881 GGAGTCCTGGACTAAGGGGT 59.957 60.000 28.41 5.74 43.53 4.95
216 217 0.691413 GGGAGTCCTGGACTAAGGGG 60.691 65.000 28.41 0.00 43.53 4.79
217 218 0.340208 AGGGAGTCCTGGACTAAGGG 59.660 60.000 28.41 0.00 43.53 3.95
218 219 1.007238 TGAGGGAGTCCTGGACTAAGG 59.993 57.143 28.41 0.00 43.53 2.69
219 220 2.104170 GTGAGGGAGTCCTGGACTAAG 58.896 57.143 28.41 0.00 43.53 2.18
220 221 1.273098 GGTGAGGGAGTCCTGGACTAA 60.273 57.143 28.41 9.96 43.53 2.24
221 222 0.335361 GGTGAGGGAGTCCTGGACTA 59.665 60.000 28.41 10.70 43.53 2.59
222 223 1.079438 GGTGAGGGAGTCCTGGACT 59.921 63.158 28.70 28.70 46.42 3.85
223 224 1.990614 GGGTGAGGGAGTCCTGGAC 60.991 68.421 19.20 19.20 45.05 4.02
224 225 2.450243 GGGTGAGGGAGTCCTGGA 59.550 66.667 9.58 0.00 45.05 3.86
225 226 2.122729 TGGGTGAGGGAGTCCTGG 59.877 66.667 9.58 0.00 45.05 4.45
226 227 2.294078 GGTGGGTGAGGGAGTCCTG 61.294 68.421 9.58 0.00 45.05 3.86
228 229 1.990614 GAGGTGGGTGAGGGAGTCC 60.991 68.421 0.00 0.00 0.00 3.85
229 230 1.990614 GGAGGTGGGTGAGGGAGTC 60.991 68.421 0.00 0.00 0.00 3.36
230 231 2.122954 GGAGGTGGGTGAGGGAGT 59.877 66.667 0.00 0.00 0.00 3.85
231 232 1.687493 GAGGAGGTGGGTGAGGGAG 60.687 68.421 0.00 0.00 0.00 4.30
232 233 2.450243 GAGGAGGTGGGTGAGGGA 59.550 66.667 0.00 0.00 0.00 4.20
233 234 2.689034 GGAGGAGGTGGGTGAGGG 60.689 72.222 0.00 0.00 0.00 4.30
234 235 2.689034 GGGAGGAGGTGGGTGAGG 60.689 72.222 0.00 0.00 0.00 3.86
235 236 1.229658 AAGGGAGGAGGTGGGTGAG 60.230 63.158 0.00 0.00 0.00 3.51
236 237 1.229529 GAAGGGAGGAGGTGGGTGA 60.230 63.158 0.00 0.00 0.00 4.02
237 238 2.301738 GGAAGGGAGGAGGTGGGTG 61.302 68.421 0.00 0.00 0.00 4.61
238 239 2.125225 GGAAGGGAGGAGGTGGGT 59.875 66.667 0.00 0.00 0.00 4.51
239 240 3.083997 CGGAAGGGAGGAGGTGGG 61.084 72.222 0.00 0.00 0.00 4.61
240 241 2.038975 TCGGAAGGGAGGAGGTGG 59.961 66.667 0.00 0.00 0.00 4.61
241 242 3.622514 CTCGGAAGGGAGGAGGTG 58.377 66.667 0.00 0.00 0.00 4.00
265 266 1.482593 CCATAGATCCCATAGGGCGAC 59.517 57.143 0.00 0.00 43.94 5.19
266 267 1.361197 TCCATAGATCCCATAGGGCGA 59.639 52.381 0.00 0.00 43.94 5.54
267 268 1.866015 TCCATAGATCCCATAGGGCG 58.134 55.000 0.00 0.00 43.94 6.13
277 278 2.104170 GGGTCCTCGGATCCATAGATC 58.896 57.143 13.41 4.60 44.55 2.75
278 279 1.273324 GGGGTCCTCGGATCCATAGAT 60.273 57.143 16.76 0.00 46.89 1.98
279 280 0.114560 GGGGTCCTCGGATCCATAGA 59.885 60.000 16.76 1.18 46.89 1.98
280 281 0.115349 AGGGGTCCTCGGATCCATAG 59.885 60.000 16.76 8.34 46.89 2.23
281 282 0.566176 AAGGGGTCCTCGGATCCATA 59.434 55.000 16.76 0.00 46.89 2.74
282 283 0.566176 TAAGGGGTCCTCGGATCCAT 59.434 55.000 16.76 7.11 46.89 3.41
283 284 0.105658 CTAAGGGGTCCTCGGATCCA 60.106 60.000 16.76 0.00 46.89 3.41
284 285 0.105607 ACTAAGGGGTCCTCGGATCC 60.106 60.000 6.71 6.71 44.44 3.36
285 286 1.330234 GACTAAGGGGTCCTCGGATC 58.670 60.000 0.00 0.00 30.89 3.36
286 287 3.535574 GACTAAGGGGTCCTCGGAT 57.464 57.895 0.00 0.00 30.89 4.18
293 294 1.832366 GAAGTCCTGGACTAAGGGGTC 59.168 57.143 28.55 17.40 42.59 4.46
294 295 1.555058 GGAAGTCCTGGACTAAGGGGT 60.555 57.143 28.55 12.80 42.59 4.95
295 296 1.205055 GGAAGTCCTGGACTAAGGGG 58.795 60.000 28.55 0.00 42.59 4.79
296 297 2.255770 AGGAAGTCCTGGACTAAGGG 57.744 55.000 28.55 0.00 46.55 3.95
300 301 8.724011 TTCGAAGATGAGGAAGTCCTGGACTA 62.724 46.154 28.55 13.88 41.87 2.59
302 303 5.887941 TTCGAAGATGAGGAAGTCCTGGAC 61.888 50.000 19.20 19.20 41.87 4.02
303 304 3.817931 TTCGAAGATGAGGAAGTCCTGGA 60.818 47.826 4.10 0.00 41.87 3.86
304 305 2.497675 TTCGAAGATGAGGAAGTCCTGG 59.502 50.000 4.10 0.00 41.87 4.45
305 306 3.876274 TTCGAAGATGAGGAAGTCCTG 57.124 47.619 4.10 0.00 41.87 3.86
306 307 3.386402 GGATTCGAAGATGAGGAAGTCCT 59.614 47.826 3.35 0.00 44.01 3.85
307 308 3.386402 AGGATTCGAAGATGAGGAAGTCC 59.614 47.826 3.35 1.35 35.04 3.85
308 309 4.098654 TCAGGATTCGAAGATGAGGAAGTC 59.901 45.833 3.35 0.00 35.04 3.01
309 310 4.026744 TCAGGATTCGAAGATGAGGAAGT 58.973 43.478 3.35 0.00 35.04 3.01
310 311 4.662468 TCAGGATTCGAAGATGAGGAAG 57.338 45.455 3.35 0.00 35.04 3.46
311 312 4.898265 AGATCAGGATTCGAAGATGAGGAA 59.102 41.667 3.35 0.00 35.04 3.36
312 313 4.280425 CAGATCAGGATTCGAAGATGAGGA 59.720 45.833 3.35 0.00 35.04 3.71
313 314 4.558178 CAGATCAGGATTCGAAGATGAGG 58.442 47.826 3.35 0.00 35.04 3.86
314 315 4.558178 CCAGATCAGGATTCGAAGATGAG 58.442 47.826 3.35 0.00 35.04 2.90
315 316 3.244009 GCCAGATCAGGATTCGAAGATGA 60.244 47.826 8.61 8.02 35.04 2.92
316 317 3.065655 GCCAGATCAGGATTCGAAGATG 58.934 50.000 8.61 2.34 35.04 2.90
317 318 2.288702 CGCCAGATCAGGATTCGAAGAT 60.289 50.000 8.61 0.17 35.04 2.40
318 319 1.067669 CGCCAGATCAGGATTCGAAGA 59.932 52.381 8.61 0.00 0.00 2.87
319 320 1.495878 CGCCAGATCAGGATTCGAAG 58.504 55.000 8.61 0.00 0.00 3.79
320 321 0.104855 CCGCCAGATCAGGATTCGAA 59.895 55.000 8.61 0.00 0.00 3.71
321 322 1.742146 CCGCCAGATCAGGATTCGA 59.258 57.895 8.61 0.00 0.00 3.71
322 323 1.958205 GCCGCCAGATCAGGATTCG 60.958 63.158 8.61 2.02 0.00 3.34
323 324 0.681733 TAGCCGCCAGATCAGGATTC 59.318 55.000 8.61 0.00 0.00 2.52
324 325 1.002888 CATAGCCGCCAGATCAGGATT 59.997 52.381 8.61 0.00 0.00 3.01
325 326 0.612229 CATAGCCGCCAGATCAGGAT 59.388 55.000 8.61 0.45 0.00 3.24
326 327 0.760567 ACATAGCCGCCAGATCAGGA 60.761 55.000 8.61 0.00 0.00 3.86
327 328 0.602106 CACATAGCCGCCAGATCAGG 60.602 60.000 0.00 0.00 0.00 3.86
328 329 0.390492 TCACATAGCCGCCAGATCAG 59.610 55.000 0.00 0.00 0.00 2.90
329 330 0.104855 GTCACATAGCCGCCAGATCA 59.895 55.000 0.00 0.00 0.00 2.92
330 331 0.390860 AGTCACATAGCCGCCAGATC 59.609 55.000 0.00 0.00 0.00 2.75
331 332 0.105593 CAGTCACATAGCCGCCAGAT 59.894 55.000 0.00 0.00 0.00 2.90
332 333 1.517361 CAGTCACATAGCCGCCAGA 59.483 57.895 0.00 0.00 0.00 3.86
333 334 2.176273 GCAGTCACATAGCCGCCAG 61.176 63.158 0.00 0.00 0.00 4.85
334 335 2.125147 GCAGTCACATAGCCGCCA 60.125 61.111 0.00 0.00 0.00 5.69
335 336 1.884926 GAGCAGTCACATAGCCGCC 60.885 63.158 0.00 0.00 0.00 6.13
336 337 2.233654 CGAGCAGTCACATAGCCGC 61.234 63.158 0.00 0.00 0.00 6.53
337 338 1.589993 CCGAGCAGTCACATAGCCG 60.590 63.158 0.00 0.00 0.00 5.52
338 339 0.390860 ATCCGAGCAGTCACATAGCC 59.609 55.000 0.00 0.00 0.00 3.93
339 340 1.604185 GGATCCGAGCAGTCACATAGC 60.604 57.143 0.00 0.00 0.00 2.97
340 341 1.335415 CGGATCCGAGCAGTCACATAG 60.335 57.143 30.62 0.00 42.83 2.23
341 342 0.668535 CGGATCCGAGCAGTCACATA 59.331 55.000 30.62 0.00 42.83 2.29
342 343 1.439228 CGGATCCGAGCAGTCACAT 59.561 57.895 30.62 0.00 42.83 3.21
343 344 2.710902 CCGGATCCGAGCAGTCACA 61.711 63.158 35.42 0.00 42.83 3.58
344 345 2.105128 CCGGATCCGAGCAGTCAC 59.895 66.667 35.42 0.00 42.83 3.67
345 346 3.147595 CCCGGATCCGAGCAGTCA 61.148 66.667 35.42 0.00 42.83 3.41
346 347 4.593864 GCCCGGATCCGAGCAGTC 62.594 72.222 32.80 12.51 42.66 3.51
350 351 3.311110 TATGGCCCGGATCCGAGC 61.311 66.667 35.42 32.91 42.40 5.03
351 352 2.657237 GTATGGCCCGGATCCGAG 59.343 66.667 35.42 24.49 42.83 4.63
352 353 3.299977 CGTATGGCCCGGATCCGA 61.300 66.667 35.42 16.09 42.83 4.55
353 354 2.372040 TTTCGTATGGCCCGGATCCG 62.372 60.000 27.65 27.65 39.44 4.18
354 355 0.036306 ATTTCGTATGGCCCGGATCC 59.964 55.000 0.73 0.00 0.00 3.36
355 356 1.439679 GATTTCGTATGGCCCGGATC 58.560 55.000 0.73 1.16 0.00 3.36
356 357 0.036306 GGATTTCGTATGGCCCGGAT 59.964 55.000 0.73 0.00 0.00 4.18
357 358 1.338890 TGGATTTCGTATGGCCCGGA 61.339 55.000 0.73 0.00 0.00 5.14
358 359 0.250727 ATGGATTTCGTATGGCCCGG 60.251 55.000 0.00 0.00 0.00 5.73
359 360 0.874390 CATGGATTTCGTATGGCCCG 59.126 55.000 0.00 0.00 0.00 6.13
360 361 0.598065 GCATGGATTTCGTATGGCCC 59.402 55.000 0.00 0.00 0.00 5.80
361 362 0.598065 GGCATGGATTTCGTATGGCC 59.402 55.000 0.00 0.00 40.33 5.36
362 363 0.598065 GGGCATGGATTTCGTATGGC 59.402 55.000 0.00 0.00 44.01 4.40
363 364 0.874390 CGGGCATGGATTTCGTATGG 59.126 55.000 0.00 0.00 0.00 2.74
364 365 0.874390 CCGGGCATGGATTTCGTATG 59.126 55.000 0.00 0.00 0.00 2.39
365 366 0.889186 GCCGGGCATGGATTTCGTAT 60.889 55.000 15.62 0.00 0.00 3.06
366 367 1.525077 GCCGGGCATGGATTTCGTA 60.525 57.895 15.62 0.00 0.00 3.43
367 368 2.828549 GCCGGGCATGGATTTCGT 60.829 61.111 15.62 0.00 0.00 3.85
368 369 2.120909 AAGCCGGGCATGGATTTCG 61.121 57.895 23.09 0.00 32.70 3.46
369 370 1.438814 CAAGCCGGGCATGGATTTC 59.561 57.895 23.09 0.00 34.87 2.17
370 371 2.724273 GCAAGCCGGGCATGGATTT 61.724 57.895 24.03 4.75 34.87 2.17
371 372 3.149648 GCAAGCCGGGCATGGATT 61.150 61.111 24.03 5.51 38.38 3.01
372 373 4.133373 AGCAAGCCGGGCATGGAT 62.133 61.111 24.03 7.89 0.00 3.41
375 376 2.831742 ATCAGCAAGCCGGGCATG 60.832 61.111 23.09 21.12 0.00 4.06
376 377 2.831742 CATCAGCAAGCCGGGCAT 60.832 61.111 23.09 6.30 0.00 4.40
383 384 4.189188 CTGCCGGCATCAGCAAGC 62.189 66.667 32.87 0.00 44.61 4.01
397 398 4.152625 GACATGTGTCGCCGCTGC 62.153 66.667 1.15 0.00 35.12 5.25
405 406 1.503818 AAACGGCACCGACATGTGTC 61.504 55.000 17.40 3.07 42.83 3.67
406 407 1.503818 GAAACGGCACCGACATGTGT 61.504 55.000 17.40 0.00 42.83 3.72
407 408 1.206578 GAAACGGCACCGACATGTG 59.793 57.895 17.40 0.00 42.83 3.21
408 409 1.964373 GGAAACGGCACCGACATGT 60.964 57.895 17.40 0.00 42.83 3.21
409 410 2.686816 GGGAAACGGCACCGACATG 61.687 63.158 17.40 0.00 42.83 3.21
410 411 2.359478 GGGAAACGGCACCGACAT 60.359 61.111 17.40 0.65 42.83 3.06
411 412 2.999739 GAAGGGAAACGGCACCGACA 63.000 60.000 17.40 0.00 42.83 4.35
412 413 2.281276 AAGGGAAACGGCACCGAC 60.281 61.111 17.40 6.61 42.83 4.79
413 414 2.031465 GAAGGGAAACGGCACCGA 59.969 61.111 17.40 0.00 42.83 4.69
414 415 1.599797 AAGAAGGGAAACGGCACCG 60.600 57.895 7.71 7.71 46.03 4.94
415 416 1.524008 CCAAGAAGGGAAACGGCACC 61.524 60.000 0.00 0.00 0.00 5.01
416 417 0.536460 TCCAAGAAGGGAAACGGCAC 60.536 55.000 0.00 0.00 38.24 5.01
417 418 0.250727 CTCCAAGAAGGGAAACGGCA 60.251 55.000 0.00 0.00 36.27 5.69
418 419 0.960861 CCTCCAAGAAGGGAAACGGC 60.961 60.000 0.00 0.00 36.27 5.68
419 420 0.960861 GCCTCCAAGAAGGGAAACGG 60.961 60.000 0.00 0.00 36.27 4.44
420 421 1.298859 CGCCTCCAAGAAGGGAAACG 61.299 60.000 0.00 0.00 36.27 3.60
421 422 0.250770 ACGCCTCCAAGAAGGGAAAC 60.251 55.000 0.00 0.00 36.27 2.78
422 423 0.476771 AACGCCTCCAAGAAGGGAAA 59.523 50.000 0.00 0.00 36.27 3.13
423 424 0.250727 CAACGCCTCCAAGAAGGGAA 60.251 55.000 0.00 0.00 36.27 3.97
424 425 1.374947 CAACGCCTCCAAGAAGGGA 59.625 57.895 0.00 0.00 36.88 4.20
425 426 2.335712 GCAACGCCTCCAAGAAGGG 61.336 63.158 0.00 0.00 36.88 3.95
426 427 2.335712 GGCAACGCCTCCAAGAAGG 61.336 63.158 0.00 0.00 46.69 3.46
427 428 3.267974 GGCAACGCCTCCAAGAAG 58.732 61.111 0.00 0.00 46.69 2.85
439 440 1.807226 GGATAAAGGCCGTGGCAAC 59.193 57.895 13.76 0.00 44.11 4.17
440 441 1.747367 CGGATAAAGGCCGTGGCAA 60.747 57.895 13.76 0.00 43.66 4.52
441 442 2.124901 CGGATAAAGGCCGTGGCA 60.125 61.111 13.76 0.00 43.66 4.92
448 449 4.564110 AGGGGCGCGGATAAAGGC 62.564 66.667 8.83 0.00 0.00 4.35
449 450 2.280865 GAGGGGCGCGGATAAAGG 60.281 66.667 8.83 0.00 0.00 3.11
450 451 0.880718 GAAGAGGGGCGCGGATAAAG 60.881 60.000 8.83 0.00 0.00 1.85
451 452 1.145377 GAAGAGGGGCGCGGATAAA 59.855 57.895 8.83 0.00 0.00 1.40
452 453 1.618876 TTGAAGAGGGGCGCGGATAA 61.619 55.000 8.83 0.00 0.00 1.75
453 454 2.028125 CTTGAAGAGGGGCGCGGATA 62.028 60.000 8.83 0.00 0.00 2.59
454 455 3.391665 CTTGAAGAGGGGCGCGGAT 62.392 63.158 8.83 0.00 0.00 4.18
455 456 4.082523 CTTGAAGAGGGGCGCGGA 62.083 66.667 8.83 0.00 0.00 5.54
457 458 3.391665 ATCCTTGAAGAGGGGCGCG 62.392 63.158 0.00 0.00 46.31 6.86
458 459 1.524849 GATCCTTGAAGAGGGGCGC 60.525 63.158 0.00 0.00 46.31 6.53
459 460 1.227380 CGATCCTTGAAGAGGGGCG 60.227 63.158 0.00 0.00 46.31 6.13
460 461 0.105778 CTCGATCCTTGAAGAGGGGC 59.894 60.000 0.00 0.00 46.31 5.80
461 462 0.755686 CCTCGATCCTTGAAGAGGGG 59.244 60.000 0.00 0.00 46.31 4.79
464 465 4.092091 CGTTTTTCCTCGATCCTTGAAGAG 59.908 45.833 0.00 0.00 0.00 2.85
465 466 3.994392 CGTTTTTCCTCGATCCTTGAAGA 59.006 43.478 0.00 0.00 0.00 2.87
466 467 3.424962 GCGTTTTTCCTCGATCCTTGAAG 60.425 47.826 0.00 0.00 0.00 3.02
467 468 2.482721 GCGTTTTTCCTCGATCCTTGAA 59.517 45.455 0.00 0.00 0.00 2.69
468 469 2.073816 GCGTTTTTCCTCGATCCTTGA 58.926 47.619 0.00 0.00 0.00 3.02
469 470 1.804151 TGCGTTTTTCCTCGATCCTTG 59.196 47.619 0.00 0.00 0.00 3.61
470 471 2.076863 CTGCGTTTTTCCTCGATCCTT 58.923 47.619 0.00 0.00 0.00 3.36
471 472 1.676014 CCTGCGTTTTTCCTCGATCCT 60.676 52.381 0.00 0.00 0.00 3.24
472 473 0.727398 CCTGCGTTTTTCCTCGATCC 59.273 55.000 0.00 0.00 0.00 3.36
473 474 1.393883 GACCTGCGTTTTTCCTCGATC 59.606 52.381 0.00 0.00 0.00 3.69
474 475 1.439679 GACCTGCGTTTTTCCTCGAT 58.560 50.000 0.00 0.00 0.00 3.59
475 476 0.601841 GGACCTGCGTTTTTCCTCGA 60.602 55.000 0.00 0.00 0.00 4.04
476 477 1.866925 GGACCTGCGTTTTTCCTCG 59.133 57.895 0.00 0.00 0.00 4.63
477 478 1.574702 CCGGACCTGCGTTTTTCCTC 61.575 60.000 0.00 0.00 0.00 3.71
478 479 1.599797 CCGGACCTGCGTTTTTCCT 60.600 57.895 0.00 0.00 0.00 3.36
479 480 2.951458 CCGGACCTGCGTTTTTCC 59.049 61.111 0.00 0.00 0.00 3.13
480 481 2.183858 GAGCCGGACCTGCGTTTTTC 62.184 60.000 5.05 0.00 0.00 2.29
481 482 2.203294 AGCCGGACCTGCGTTTTT 60.203 55.556 5.05 0.00 0.00 1.94
482 483 2.668550 GAGCCGGACCTGCGTTTT 60.669 61.111 5.05 0.00 0.00 2.43
483 484 3.591254 GAGAGCCGGACCTGCGTTT 62.591 63.158 5.05 0.00 0.00 3.60
484 485 4.070552 GAGAGCCGGACCTGCGTT 62.071 66.667 5.05 0.00 0.00 4.84
527 528 2.482296 TTCGAGAAGGGGAACGACGC 62.482 60.000 0.00 0.00 34.59 5.19
528 529 0.456312 CTTCGAGAAGGGGAACGACG 60.456 60.000 4.99 0.00 34.87 5.12
529 530 3.420397 CTTCGAGAAGGGGAACGAC 57.580 57.895 4.99 0.00 34.87 4.34
538 539 3.320673 AAACCTGCTACCTTCGAGAAG 57.679 47.619 5.90 5.90 38.14 2.85
539 540 3.764237 AAAACCTGCTACCTTCGAGAA 57.236 42.857 0.00 0.00 0.00 2.87
540 541 3.764237 AAAAACCTGCTACCTTCGAGA 57.236 42.857 0.00 0.00 0.00 4.04
568 569 9.425577 GTCAAACTAGCTTAAATCTGTCTAACT 57.574 33.333 0.00 0.00 0.00 2.24
569 570 9.425577 AGTCAAACTAGCTTAAATCTGTCTAAC 57.574 33.333 0.00 0.00 0.00 2.34
570 571 9.998106 AAGTCAAACTAGCTTAAATCTGTCTAA 57.002 29.630 0.00 0.00 0.00 2.10
571 572 9.424319 CAAGTCAAACTAGCTTAAATCTGTCTA 57.576 33.333 0.00 0.00 0.00 2.59
572 573 7.389053 CCAAGTCAAACTAGCTTAAATCTGTCT 59.611 37.037 0.00 0.00 0.00 3.41
573 574 7.361286 CCCAAGTCAAACTAGCTTAAATCTGTC 60.361 40.741 0.00 0.00 0.00 3.51
574 575 6.431234 CCCAAGTCAAACTAGCTTAAATCTGT 59.569 38.462 0.00 0.00 0.00 3.41
575 576 6.655003 TCCCAAGTCAAACTAGCTTAAATCTG 59.345 38.462 0.00 0.00 0.00 2.90
576 577 6.779860 TCCCAAGTCAAACTAGCTTAAATCT 58.220 36.000 0.00 0.00 0.00 2.40
577 578 7.336931 TCATCCCAAGTCAAACTAGCTTAAATC 59.663 37.037 0.00 0.00 0.00 2.17
578 579 7.175104 TCATCCCAAGTCAAACTAGCTTAAAT 58.825 34.615 0.00 0.00 0.00 1.40
579 580 6.539173 TCATCCCAAGTCAAACTAGCTTAAA 58.461 36.000 0.00 0.00 0.00 1.52
580 581 6.121776 TCATCCCAAGTCAAACTAGCTTAA 57.878 37.500 0.00 0.00 0.00 1.85
581 582 5.755409 TCATCCCAAGTCAAACTAGCTTA 57.245 39.130 0.00 0.00 0.00 3.09
582 583 4.640771 TCATCCCAAGTCAAACTAGCTT 57.359 40.909 0.00 0.00 0.00 3.74
583 584 4.640771 TTCATCCCAAGTCAAACTAGCT 57.359 40.909 0.00 0.00 0.00 3.32
584 585 4.762251 AGTTTCATCCCAAGTCAAACTAGC 59.238 41.667 0.00 0.00 35.91 3.42
585 586 5.997746 TCAGTTTCATCCCAAGTCAAACTAG 59.002 40.000 0.00 0.00 35.57 2.57
586 587 5.935945 TCAGTTTCATCCCAAGTCAAACTA 58.064 37.500 0.00 0.00 35.57 2.24
587 588 4.792068 TCAGTTTCATCCCAAGTCAAACT 58.208 39.130 0.00 0.00 37.70 2.66
588 589 5.514274 TTCAGTTTCATCCCAAGTCAAAC 57.486 39.130 0.00 0.00 0.00 2.93
589 590 5.656416 AGTTTCAGTTTCATCCCAAGTCAAA 59.344 36.000 0.00 0.00 0.00 2.69
590 591 5.200483 AGTTTCAGTTTCATCCCAAGTCAA 58.800 37.500 0.00 0.00 0.00 3.18
591 592 4.792068 AGTTTCAGTTTCATCCCAAGTCA 58.208 39.130 0.00 0.00 0.00 3.41
592 593 5.560953 CGAAGTTTCAGTTTCATCCCAAGTC 60.561 44.000 0.00 0.00 0.00 3.01
593 594 4.275936 CGAAGTTTCAGTTTCATCCCAAGT 59.724 41.667 0.00 0.00 0.00 3.16
594 595 4.515191 TCGAAGTTTCAGTTTCATCCCAAG 59.485 41.667 0.00 0.00 0.00 3.61
595 596 4.456535 TCGAAGTTTCAGTTTCATCCCAA 58.543 39.130 0.00 0.00 0.00 4.12
596 597 4.079980 TCGAAGTTTCAGTTTCATCCCA 57.920 40.909 0.00 0.00 0.00 4.37
597 598 5.629079 AATCGAAGTTTCAGTTTCATCCC 57.371 39.130 0.00 0.00 0.00 3.85
598 599 8.202745 AGATAATCGAAGTTTCAGTTTCATCC 57.797 34.615 0.00 0.00 0.00 3.51
599 600 9.483062 CAAGATAATCGAAGTTTCAGTTTCATC 57.517 33.333 0.00 0.00 0.00 2.92
600 601 8.454106 CCAAGATAATCGAAGTTTCAGTTTCAT 58.546 33.333 0.00 0.00 0.00 2.57
601 602 7.444183 ACCAAGATAATCGAAGTTTCAGTTTCA 59.556 33.333 0.00 0.00 0.00 2.69
602 603 7.807680 ACCAAGATAATCGAAGTTTCAGTTTC 58.192 34.615 0.00 0.00 0.00 2.78
603 604 7.745620 ACCAAGATAATCGAAGTTTCAGTTT 57.254 32.000 0.00 0.00 0.00 2.66
604 605 7.308589 CCAACCAAGATAATCGAAGTTTCAGTT 60.309 37.037 0.00 0.00 0.00 3.16
605 606 6.149474 CCAACCAAGATAATCGAAGTTTCAGT 59.851 38.462 0.00 0.00 0.00 3.41
606 607 6.149474 ACCAACCAAGATAATCGAAGTTTCAG 59.851 38.462 0.00 0.00 0.00 3.02
607 608 6.001460 ACCAACCAAGATAATCGAAGTTTCA 58.999 36.000 0.00 0.00 0.00 2.69
608 609 6.496338 ACCAACCAAGATAATCGAAGTTTC 57.504 37.500 0.00 0.00 0.00 2.78
609 610 6.938030 TGTACCAACCAAGATAATCGAAGTTT 59.062 34.615 0.00 0.00 0.00 2.66
610 611 6.469410 TGTACCAACCAAGATAATCGAAGTT 58.531 36.000 0.00 0.00 0.00 2.66
611 612 6.045072 TGTACCAACCAAGATAATCGAAGT 57.955 37.500 0.00 0.00 0.00 3.01
612 613 6.978343 TTGTACCAACCAAGATAATCGAAG 57.022 37.500 0.00 0.00 0.00 3.79
613 614 6.373216 CCTTTGTACCAACCAAGATAATCGAA 59.627 38.462 0.00 0.00 31.52 3.71
614 615 5.878116 CCTTTGTACCAACCAAGATAATCGA 59.122 40.000 0.00 0.00 31.52 3.59
615 616 5.065988 CCCTTTGTACCAACCAAGATAATCG 59.934 44.000 0.00 0.00 31.52 3.34
616 617 6.184789 TCCCTTTGTACCAACCAAGATAATC 58.815 40.000 0.00 0.00 31.52 1.75
617 618 6.147437 TCCCTTTGTACCAACCAAGATAAT 57.853 37.500 0.00 0.00 31.52 1.28
618 619 5.515886 CCTCCCTTTGTACCAACCAAGATAA 60.516 44.000 0.00 0.00 31.52 1.75
619 620 4.018779 CCTCCCTTTGTACCAACCAAGATA 60.019 45.833 0.00 0.00 31.52 1.98
620 621 3.245264 CCTCCCTTTGTACCAACCAAGAT 60.245 47.826 0.00 0.00 31.52 2.40
621 622 2.107552 CCTCCCTTTGTACCAACCAAGA 59.892 50.000 0.00 0.00 31.52 3.02
622 623 2.514803 CCTCCCTTTGTACCAACCAAG 58.485 52.381 0.00 0.00 0.00 3.61
623 624 1.146152 CCCTCCCTTTGTACCAACCAA 59.854 52.381 0.00 0.00 0.00 3.67
624 625 0.774908 CCCTCCCTTTGTACCAACCA 59.225 55.000 0.00 0.00 0.00 3.67
625 626 1.004394 CTCCCTCCCTTTGTACCAACC 59.996 57.143 0.00 0.00 0.00 3.77
626 627 1.004394 CCTCCCTCCCTTTGTACCAAC 59.996 57.143 0.00 0.00 0.00 3.77
627 628 1.368374 CCTCCCTCCCTTTGTACCAA 58.632 55.000 0.00 0.00 0.00 3.67
628 629 0.549169 CCCTCCCTCCCTTTGTACCA 60.549 60.000 0.00 0.00 0.00 3.25
629 630 0.253020 TCCCTCCCTCCCTTTGTACC 60.253 60.000 0.00 0.00 0.00 3.34
630 631 1.205055 CTCCCTCCCTCCCTTTGTAC 58.795 60.000 0.00 0.00 0.00 2.90
631 632 0.797579 ACTCCCTCCCTCCCTTTGTA 59.202 55.000 0.00 0.00 0.00 2.41
632 633 0.842467 CACTCCCTCCCTCCCTTTGT 60.842 60.000 0.00 0.00 0.00 2.83
633 634 1.994463 CACTCCCTCCCTCCCTTTG 59.006 63.158 0.00 0.00 0.00 2.77
634 635 1.925972 GCACTCCCTCCCTCCCTTT 60.926 63.158 0.00 0.00 0.00 3.11
635 636 2.285743 GCACTCCCTCCCTCCCTT 60.286 66.667 0.00 0.00 0.00 3.95
636 637 2.498820 AATGCACTCCCTCCCTCCCT 62.499 60.000 0.00 0.00 0.00 4.20
637 638 2.003548 AATGCACTCCCTCCCTCCC 61.004 63.158 0.00 0.00 0.00 4.30
638 639 1.225704 CAATGCACTCCCTCCCTCC 59.774 63.158 0.00 0.00 0.00 4.30
639 640 1.452833 GCAATGCACTCCCTCCCTC 60.453 63.158 0.00 0.00 0.00 4.30
640 641 2.679716 GCAATGCACTCCCTCCCT 59.320 61.111 0.00 0.00 0.00 4.20
641 642 2.440980 GGCAATGCACTCCCTCCC 60.441 66.667 7.79 0.00 0.00 4.30
642 643 0.685458 AATGGCAATGCACTCCCTCC 60.685 55.000 7.79 0.00 0.00 4.30
643 644 1.135721 GAAATGGCAATGCACTCCCTC 59.864 52.381 7.79 0.00 0.00 4.30
644 645 1.188863 GAAATGGCAATGCACTCCCT 58.811 50.000 7.79 0.00 0.00 4.20
645 646 0.176449 GGAAATGGCAATGCACTCCC 59.824 55.000 7.79 0.00 0.00 4.30
651 652 0.249031 GCCTACGGAAATGGCAATGC 60.249 55.000 0.00 0.00 45.46 3.56
749 750 4.845580 CACTAGGCAGGCGGGCAG 62.846 72.222 14.36 10.87 46.44 4.85
752 753 4.162690 GTCCACTAGGCAGGCGGG 62.163 72.222 0.00 0.00 33.74 6.13
753 754 2.185310 AAAGTCCACTAGGCAGGCGG 62.185 60.000 0.00 0.00 33.74 6.13
754 755 0.321653 AAAAGTCCACTAGGCAGGCG 60.322 55.000 0.00 0.00 33.74 5.52
783 784 0.537188 ACCAATCGCGACAAGAGGAT 59.463 50.000 12.93 0.00 0.00 3.24
785 786 0.721718 GAACCAATCGCGACAAGAGG 59.278 55.000 12.93 11.77 0.00 3.69
786 787 0.721718 GGAACCAATCGCGACAAGAG 59.278 55.000 12.93 0.80 0.00 2.85
807 808 2.223443 TTGCTACAGGGCTCCAGCA 61.223 57.895 1.17 1.17 44.36 4.41
834 849 2.352805 CCTCACCACTTGGAGGGC 59.647 66.667 1.14 0.00 45.62 5.19
904 946 3.599285 TTTCCGTGCACGCCCCTAG 62.599 63.158 33.17 18.41 38.18 3.02
905 947 3.627952 TTTCCGTGCACGCCCCTA 61.628 61.111 33.17 13.07 38.18 3.53
989 1031 2.887568 CGCTGTCGATGGGTGAGC 60.888 66.667 0.00 0.00 38.10 4.26
990 1032 2.887568 GCGCTGTCGATGGGTGAG 60.888 66.667 0.00 0.00 38.10 3.51
991 1033 3.233259 TTGCGCTGTCGATGGGTGA 62.233 57.895 9.73 0.00 38.10 4.02
992 1034 2.741985 TTGCGCTGTCGATGGGTG 60.742 61.111 9.73 0.00 38.10 4.61
1380 1692 4.787280 AGCGAGGGGTGGGAGAGG 62.787 72.222 0.00 0.00 0.00 3.69
1567 1879 1.003573 AGGAGGAGGAGGCCGAATT 59.996 57.895 0.00 0.00 0.00 2.17
1570 1882 2.648613 GATGAGGAGGAGGAGGCCGA 62.649 65.000 0.00 0.00 0.00 5.54
1576 1888 1.669927 GGGGAGGATGAGGAGGAGGA 61.670 65.000 0.00 0.00 0.00 3.71
1577 1889 1.152139 GGGGAGGATGAGGAGGAGG 60.152 68.421 0.00 0.00 0.00 4.30
1579 1891 2.609339 CGGGGAGGATGAGGAGGA 59.391 66.667 0.00 0.00 0.00 3.71
1585 1897 4.880426 GGGGAGCGGGGAGGATGA 62.880 72.222 0.00 0.00 0.00 2.92
1586 1898 4.888325 AGGGGAGCGGGGAGGATG 62.888 72.222 0.00 0.00 0.00 3.51
1587 1899 4.565850 GAGGGGAGCGGGGAGGAT 62.566 72.222 0.00 0.00 0.00 3.24
1881 2193 3.646715 TTGAAGTGGGCCTCCGGG 61.647 66.667 4.53 0.00 35.24 5.73
1893 2205 4.724697 CTGTGCGCGGCGTTGAAG 62.725 66.667 24.46 12.44 0.00 3.02
2091 2403 3.564133 CCCCCAAATCATTCTCTGGTTCA 60.564 47.826 0.00 0.00 0.00 3.18
2095 2407 1.342275 TGCCCCCAAATCATTCTCTGG 60.342 52.381 0.00 0.00 0.00 3.86
2102 2417 0.834612 CTGCATTGCCCCCAAATCAT 59.165 50.000 6.12 0.00 34.05 2.45
2225 2540 5.616270 TGTTAAACAATCACCAGTGCTAGA 58.384 37.500 0.00 0.00 0.00 2.43
2309 2642 8.310382 CCAACAGATTAATGAACCCAATGTAAA 58.690 33.333 0.00 0.00 0.00 2.01
2441 2791 5.593909 TCCAGCAGTTTTGAAGAAGAAATCA 59.406 36.000 0.00 0.00 0.00 2.57
2454 2804 6.820656 CACATCTATCTACTTCCAGCAGTTTT 59.179 38.462 0.00 0.00 0.00 2.43
2490 2841 9.831737 CATTTGTCTATCTGTTTGGAAGTTTAG 57.168 33.333 0.00 0.00 0.00 1.85
2570 2941 0.106066 TTGCCCTTATCCCTGCCATG 60.106 55.000 0.00 0.00 0.00 3.66
2629 3004 6.621316 TTACTACTGCTACATCTAGCTGAC 57.379 41.667 12.65 0.00 45.20 3.51
2929 4733 2.834549 TCTTGAGTCAGTGAAGGGGATC 59.165 50.000 0.00 0.00 0.00 3.36
2942 4746 3.944055 TGGAGTAGTGCTTCTTGAGTC 57.056 47.619 0.00 0.00 0.00 3.36
2980 4784 4.151121 TGAATCTTCCAATCACTGGCAAA 58.849 39.130 0.00 0.00 45.98 3.68
3163 4967 3.118112 ACCATGAGTGTCTTGGATGGATC 60.118 47.826 14.10 0.00 42.46 3.36
3170 4974 1.625315 TCTCCACCATGAGTGTCTTGG 59.375 52.381 11.73 7.18 45.74 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.