Multiple sequence alignment - TraesCS7B01G021700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G021700 chr7B 100.000 2809 0 0 1 2809 20036476 20033668 0.000000e+00 5188.0
1 TraesCS7B01G021700 chr7B 87.500 1200 88 27 952 2125 632947011 632945848 0.000000e+00 1328.0
2 TraesCS7B01G021700 chr7B 84.500 400 50 9 2312 2701 632945738 632945341 4.390000e-103 385.0
3 TraesCS7B01G021700 chr7B 86.408 309 41 1 117 424 599361943 599361635 1.250000e-88 337.0
4 TraesCS7B01G021700 chr7B 83.815 346 49 6 115 454 438886721 438886377 3.490000e-84 322.0
5 TraesCS7B01G021700 chr7B 92.391 92 7 0 2179 2270 632945844 632945753 6.310000e-27 132.0
6 TraesCS7B01G021700 chr7B 92.453 53 4 0 1924 1976 632685626 632685678 3.000000e-10 76.8
7 TraesCS7B01G021700 chr3D 83.774 2157 189 67 705 2760 552754829 552756925 0.000000e+00 1895.0
8 TraesCS7B01G021700 chr3D 77.206 408 77 14 1049 1445 552766770 552767172 1.010000e-54 224.0
9 TraesCS7B01G021700 chr3D 86.207 116 15 1 1 116 615488530 615488644 1.060000e-24 124.0
10 TraesCS7B01G021700 chr3D 90.625 64 6 0 2744 2807 308333041 308332978 4.990000e-13 86.1
11 TraesCS7B01G021700 chr3D 86.076 79 11 0 2731 2809 328976872 328976950 4.990000e-13 86.1
12 TraesCS7B01G021700 chr3B 88.621 1204 78 26 693 1856 733562246 733563430 0.000000e+00 1410.0
13 TraesCS7B01G021700 chr3B 81.510 649 70 29 708 1344 733385228 733385838 3.250000e-134 488.0
14 TraesCS7B01G021700 chr3B 83.394 548 62 10 2199 2739 733568339 733568864 5.440000e-132 481.0
15 TraesCS7B01G021700 chr3B 81.076 502 79 12 965 1462 733574002 733574491 1.220000e-103 387.0
16 TraesCS7B01G021700 chr3B 87.075 294 25 9 115 408 39647871 39647591 1.260000e-83 320.0
17 TraesCS7B01G021700 chr3B 79.942 344 63 3 115 457 735007353 735007015 6.010000e-62 248.0
18 TraesCS7B01G021700 chr3B 85.897 78 11 0 2730 2807 733603232 733603155 1.790000e-12 84.2
19 TraesCS7B01G021700 chr3A 87.678 1193 72 35 704 1856 689006920 689008077 0.000000e+00 1319.0
20 TraesCS7B01G021700 chr3A 83.239 352 35 12 2199 2526 689008380 689008731 4.550000e-78 302.0
21 TraesCS7B01G021700 chr3A 80.282 142 9 6 1861 1983 689008107 689008248 3.850000e-14 89.8
22 TraesCS7B01G021700 chr2B 88.444 1125 87 20 993 2081 759301953 759300836 0.000000e+00 1317.0
23 TraesCS7B01G021700 chr2B 77.890 493 91 13 994 1471 759274382 759273893 9.840000e-75 291.0
24 TraesCS7B01G021700 chr2B 86.207 116 15 1 1 116 620851504 620851618 1.060000e-24 124.0
25 TraesCS7B01G021700 chr2B 83.562 73 10 2 544 614 138968501 138968429 1.810000e-07 67.6
26 TraesCS7B01G021700 chr7D 85.703 1259 92 30 884 2119 573909518 573910711 0.000000e+00 1247.0
27 TraesCS7B01G021700 chr7D 84.211 342 48 5 115 454 422660989 422661326 7.500000e-86 327.0
28 TraesCS7B01G021700 chr7D 83.784 333 44 8 115 438 5567035 5566704 9.770000e-80 307.0
29 TraesCS7B01G021700 chr7D 92.391 92 7 0 2179 2270 573910721 573910812 6.310000e-27 132.0
30 TraesCS7B01G021700 chr7D 77.160 162 22 8 1816 1976 573898922 573899069 2.320000e-11 80.5
31 TraesCS7B01G021700 chr2A 88.306 992 86 16 880 1859 751197989 751197016 0.000000e+00 1162.0
32 TraesCS7B01G021700 chr2A 86.286 350 31 7 1923 2264 751194056 751193716 5.720000e-97 364.0
33 TraesCS7B01G021700 chr2A 84.043 94 9 4 1855 1942 751197001 751196908 4.990000e-13 86.1
34 TraesCS7B01G021700 chr2A 84.286 70 10 1 543 612 88983196 88983264 1.810000e-07 67.6
35 TraesCS7B01G021700 chr4D 86.167 347 42 4 115 460 75397936 75397595 1.230000e-98 370.0
36 TraesCS7B01G021700 chr4D 84.770 348 50 3 109 455 440800798 440801143 2.070000e-91 346.0
37 TraesCS7B01G021700 chr4D 89.655 116 11 1 1 116 464535069 464534955 2.250000e-31 147.0
38 TraesCS7B01G021700 chr4D 87.069 116 14 1 1 116 67245693 67245807 2.270000e-26 130.0
39 TraesCS7B01G021700 chr4D 86.207 116 15 1 1 116 439875822 439875936 1.060000e-24 124.0
40 TraesCS7B01G021700 chr5B 85.174 317 46 1 115 430 492442584 492442268 9.700000e-85 324.0
41 TraesCS7B01G021700 chr5B 82.555 321 45 6 144 462 457362261 457362572 3.570000e-69 272.0
42 TraesCS7B01G021700 chr2D 81.690 284 45 6 1886 2164 488849351 488849632 2.180000e-56 230.0
43 TraesCS7B01G021700 chr2D 83.957 187 18 3 1625 1811 50758209 50758383 4.810000e-38 169.0
44 TraesCS7B01G021700 chr2D 85.345 116 16 1 1 116 542641779 542641665 4.920000e-23 119.0
45 TraesCS7B01G021700 chr2D 85.185 81 12 0 2729 2809 219671950 219672030 1.790000e-12 84.2
46 TraesCS7B01G021700 chr5D 88.696 115 12 1 2 116 447300436 447300549 3.770000e-29 139.0
47 TraesCS7B01G021700 chr5D 93.443 61 4 0 2744 2804 142155363 142155423 1.070000e-14 91.6
48 TraesCS7B01G021700 chr5D 90.625 64 6 0 2744 2807 311567959 311567896 4.990000e-13 86.1
49 TraesCS7B01G021700 chr6D 86.207 116 13 3 1 116 366690401 366690289 3.800000e-24 122.0
50 TraesCS7B01G021700 chr6D 86.842 76 10 0 2729 2804 275638173 275638248 4.990000e-13 86.1
51 TraesCS7B01G021700 chr1B 86.842 114 9 4 4 116 304182822 304182714 3.800000e-24 122.0
52 TraesCS7B01G021700 chr6B 82.609 115 19 1 499 612 213643747 213643861 1.780000e-17 100.0
53 TraesCS7B01G021700 chr1D 93.443 61 4 0 2744 2804 341412690 341412750 1.070000e-14 91.6
54 TraesCS7B01G021700 chr1D 87.143 70 9 0 2729 2798 312287620 312287689 2.320000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G021700 chr7B 20033668 20036476 2808 True 5188.000000 5188 100.000000 1 2809 1 chr7B.!!$R1 2808
1 TraesCS7B01G021700 chr7B 632945341 632947011 1670 True 615.000000 1328 88.130333 952 2701 3 chr7B.!!$R4 1749
2 TraesCS7B01G021700 chr3D 552754829 552756925 2096 False 1895.000000 1895 83.774000 705 2760 1 chr3D.!!$F2 2055
3 TraesCS7B01G021700 chr3B 733562246 733563430 1184 False 1410.000000 1410 88.621000 693 1856 1 chr3B.!!$F2 1163
4 TraesCS7B01G021700 chr3B 733385228 733385838 610 False 488.000000 488 81.510000 708 1344 1 chr3B.!!$F1 636
5 TraesCS7B01G021700 chr3B 733568339 733568864 525 False 481.000000 481 83.394000 2199 2739 1 chr3B.!!$F3 540
6 TraesCS7B01G021700 chr3A 689006920 689008731 1811 False 570.266667 1319 83.733000 704 2526 3 chr3A.!!$F1 1822
7 TraesCS7B01G021700 chr2B 759300836 759301953 1117 True 1317.000000 1317 88.444000 993 2081 1 chr2B.!!$R3 1088
8 TraesCS7B01G021700 chr7D 573909518 573910812 1294 False 689.500000 1247 89.047000 884 2270 2 chr7D.!!$F3 1386
9 TraesCS7B01G021700 chr2A 751193716 751197989 4273 True 537.366667 1162 86.211667 880 2264 3 chr2A.!!$R1 1384

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
578 579 0.02877 CGAAAAGCGGACAAAGCACA 59.971 50.0 0.0 0.0 37.01 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2000 5105 0.323178 AGCCACAGCCATCCAGAAAG 60.323 55.0 0.0 0.0 41.25 2.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.961511 GACACAGCGGGCACACGA 62.962 66.667 0.00 0.00 35.47 4.35
21 22 4.539083 ACAGCGGGCACACGACAA 62.539 61.111 0.00 0.00 35.47 3.18
22 23 3.716006 CAGCGGGCACACGACAAG 61.716 66.667 0.00 0.00 35.47 3.16
23 24 4.988598 AGCGGGCACACGACAAGG 62.989 66.667 0.00 0.00 35.47 3.61
24 25 4.980805 GCGGGCACACGACAAGGA 62.981 66.667 0.00 0.00 35.47 3.36
25 26 2.738521 CGGGCACACGACAAGGAG 60.739 66.667 0.00 0.00 35.47 3.69
26 27 2.358737 GGGCACACGACAAGGAGG 60.359 66.667 0.00 0.00 0.00 4.30
27 28 2.426023 GGCACACGACAAGGAGGT 59.574 61.111 0.00 0.00 0.00 3.85
28 29 1.961277 GGCACACGACAAGGAGGTG 60.961 63.158 0.00 0.00 37.67 4.00
29 30 2.607892 GCACACGACAAGGAGGTGC 61.608 63.158 0.00 0.00 46.53 5.01
30 31 2.029073 ACACGACAAGGAGGTGCG 59.971 61.111 0.00 0.00 35.11 5.34
31 32 3.414700 CACGACAAGGAGGTGCGC 61.415 66.667 0.00 0.00 0.00 6.09
32 33 3.923864 ACGACAAGGAGGTGCGCA 61.924 61.111 5.66 5.66 0.00 6.09
33 34 3.114616 CGACAAGGAGGTGCGCAG 61.115 66.667 12.22 0.00 0.00 5.18
34 35 2.743928 GACAAGGAGGTGCGCAGG 60.744 66.667 12.22 0.00 0.00 4.85
81 82 2.588034 GGCCATTCCCGAGTACGC 60.588 66.667 0.00 0.00 38.29 4.42
82 83 2.588034 GCCATTCCCGAGTACGCC 60.588 66.667 0.00 0.00 38.29 5.68
83 84 2.279252 CCATTCCCGAGTACGCCG 60.279 66.667 4.12 4.12 38.29 6.46
84 85 2.493030 CATTCCCGAGTACGCCGT 59.507 61.111 0.00 0.00 38.29 5.68
85 86 1.727511 CCATTCCCGAGTACGCCGTA 61.728 60.000 0.00 0.00 38.29 4.02
86 87 0.317603 CATTCCCGAGTACGCCGTAG 60.318 60.000 0.00 0.00 38.29 3.51
98 99 4.035843 CCGTAGGCTCTCCCAACT 57.964 61.111 0.00 0.00 46.14 3.16
99 100 1.517832 CCGTAGGCTCTCCCAACTG 59.482 63.158 0.00 0.00 46.14 3.16
100 101 1.517832 CGTAGGCTCTCCCAACTGG 59.482 63.158 0.00 0.00 35.39 4.00
110 111 3.260100 CCAACTGGGAGGCCTGGT 61.260 66.667 12.00 0.00 40.01 4.00
111 112 2.845345 CCAACTGGGAGGCCTGGTT 61.845 63.158 12.00 7.11 40.01 3.67
112 113 1.604593 CAACTGGGAGGCCTGGTTG 60.605 63.158 12.00 15.74 33.23 3.77
113 114 2.084930 AACTGGGAGGCCTGGTTGT 61.085 57.895 12.00 0.17 0.00 3.32
114 115 2.034687 CTGGGAGGCCTGGTTGTG 59.965 66.667 12.00 0.00 0.00 3.33
115 116 4.284550 TGGGAGGCCTGGTTGTGC 62.285 66.667 12.00 0.00 0.00 4.57
117 118 4.643387 GGAGGCCTGGTTGTGCGT 62.643 66.667 12.00 0.00 0.00 5.24
118 119 3.357079 GAGGCCTGGTTGTGCGTG 61.357 66.667 12.00 0.00 0.00 5.34
121 122 4.332637 GCCTGGTTGTGCGTGCAG 62.333 66.667 0.00 0.00 0.00 4.41
141 142 4.096003 CCATCACGCGAACCCCCT 62.096 66.667 15.93 0.00 0.00 4.79
142 143 2.819595 CATCACGCGAACCCCCTG 60.820 66.667 15.93 0.00 0.00 4.45
143 144 4.778143 ATCACGCGAACCCCCTGC 62.778 66.667 15.93 0.00 0.00 4.85
159 160 4.452733 GCCTCCCCCGTCGTCAAG 62.453 72.222 0.00 0.00 0.00 3.02
160 161 4.452733 CCTCCCCCGTCGTCAAGC 62.453 72.222 0.00 0.00 0.00 4.01
161 162 4.452733 CTCCCCCGTCGTCAAGCC 62.453 72.222 0.00 0.00 0.00 4.35
163 164 4.760047 CCCCCGTCGTCAAGCCAG 62.760 72.222 0.00 0.00 0.00 4.85
164 165 3.691342 CCCCGTCGTCAAGCCAGA 61.691 66.667 0.00 0.00 0.00 3.86
165 166 2.125912 CCCGTCGTCAAGCCAGAG 60.126 66.667 0.00 0.00 0.00 3.35
166 167 2.125912 CCGTCGTCAAGCCAGAGG 60.126 66.667 0.00 0.00 0.00 3.69
167 168 2.636412 CCGTCGTCAAGCCAGAGGA 61.636 63.158 0.00 0.00 0.00 3.71
168 169 1.153939 CGTCGTCAAGCCAGAGGAG 60.154 63.158 0.00 0.00 33.56 3.69
169 170 1.216710 GTCGTCAAGCCAGAGGAGG 59.783 63.158 0.00 0.00 33.56 4.30
170 171 1.076727 TCGTCAAGCCAGAGGAGGA 59.923 57.895 0.00 0.00 0.00 3.71
171 172 0.967887 TCGTCAAGCCAGAGGAGGAG 60.968 60.000 0.00 0.00 0.00 3.69
172 173 1.904032 GTCAAGCCAGAGGAGGAGG 59.096 63.158 0.00 0.00 0.00 4.30
173 174 0.616111 GTCAAGCCAGAGGAGGAGGA 60.616 60.000 0.00 0.00 0.00 3.71
174 175 0.117140 TCAAGCCAGAGGAGGAGGAA 59.883 55.000 0.00 0.00 0.00 3.36
175 176 0.540923 CAAGCCAGAGGAGGAGGAAG 59.459 60.000 0.00 0.00 0.00 3.46
176 177 1.271127 AAGCCAGAGGAGGAGGAAGC 61.271 60.000 0.00 0.00 0.00 3.86
177 178 2.741055 GCCAGAGGAGGAGGAAGCC 61.741 68.421 0.00 0.00 0.00 4.35
178 179 2.430610 CCAGAGGAGGAGGAAGCCG 61.431 68.421 0.00 0.00 0.00 5.52
179 180 1.380515 CAGAGGAGGAGGAAGCCGA 60.381 63.158 0.00 0.00 0.00 5.54
180 181 1.076339 AGAGGAGGAGGAAGCCGAG 60.076 63.158 0.00 0.00 0.00 4.63
181 182 2.042435 AGGAGGAGGAAGCCGAGG 60.042 66.667 0.00 0.00 0.00 4.63
182 183 3.855853 GGAGGAGGAAGCCGAGGC 61.856 72.222 5.89 5.89 42.33 4.70
195 196 3.081409 GAGGCGGGCTACCAGGAA 61.081 66.667 3.20 0.00 36.13 3.36
196 197 3.083997 AGGCGGGCTACCAGGAAG 61.084 66.667 0.56 0.00 36.13 3.46
197 198 4.858680 GGCGGGCTACCAGGAAGC 62.859 72.222 0.00 0.00 39.33 3.86
200 201 3.787001 GGGCTACCAGGAAGCGCT 61.787 66.667 2.64 2.64 46.25 5.92
201 202 2.512515 GGCTACCAGGAAGCGCTG 60.513 66.667 12.58 0.00 41.03 5.18
202 203 2.512515 GCTACCAGGAAGCGCTGG 60.513 66.667 12.58 11.96 45.70 4.85
203 204 2.512515 CTACCAGGAAGCGCTGGC 60.513 66.667 12.58 6.29 44.17 4.85
204 205 4.451150 TACCAGGAAGCGCTGGCG 62.451 66.667 12.58 10.80 46.35 5.69
221 222 4.542075 GGAGGCCTTCACCGAATC 57.458 61.111 6.77 0.00 33.69 2.52
222 223 1.153147 GGAGGCCTTCACCGAATCC 60.153 63.158 6.77 0.00 33.69 3.01
223 224 1.602237 GAGGCCTTCACCGAATCCA 59.398 57.895 6.77 0.00 33.69 3.41
224 225 0.181350 GAGGCCTTCACCGAATCCAT 59.819 55.000 6.77 0.00 33.69 3.41
225 226 0.181350 AGGCCTTCACCGAATCCATC 59.819 55.000 0.00 0.00 33.69 3.51
237 238 2.892640 TCCATCGAGTTGGAGCGG 59.107 61.111 3.55 0.00 40.90 5.52
238 239 2.892425 CCATCGAGTTGGAGCGGC 60.892 66.667 0.00 0.00 39.25 6.53
239 240 3.257561 CATCGAGTTGGAGCGGCG 61.258 66.667 0.51 0.51 0.00 6.46
240 241 4.514577 ATCGAGTTGGAGCGGCGG 62.515 66.667 9.78 0.00 0.00 6.13
242 243 4.735132 CGAGTTGGAGCGGCGGAA 62.735 66.667 9.78 0.00 0.00 4.30
243 244 2.815647 GAGTTGGAGCGGCGGAAG 60.816 66.667 9.78 0.00 0.00 3.46
244 245 3.296709 GAGTTGGAGCGGCGGAAGA 62.297 63.158 9.78 0.00 0.00 2.87
245 246 3.119096 GTTGGAGCGGCGGAAGAC 61.119 66.667 9.78 0.00 0.00 3.01
246 247 4.388499 TTGGAGCGGCGGAAGACC 62.388 66.667 9.78 0.00 33.32 3.85
264 265 3.793144 GAAGCGGCAACAGCGGAG 61.793 66.667 1.45 0.00 40.31 4.63
279 280 4.253257 GAGGAGGCCGCGTACGAG 62.253 72.222 21.65 16.82 43.93 4.18
288 289 2.353607 GCGTACGAGGCGGAGATG 60.354 66.667 21.65 0.00 0.00 2.90
289 290 2.331805 CGTACGAGGCGGAGATGG 59.668 66.667 10.44 0.00 0.00 3.51
290 291 2.027751 GTACGAGGCGGAGATGGC 59.972 66.667 0.00 0.00 0.00 4.40
291 292 3.592814 TACGAGGCGGAGATGGCG 61.593 66.667 0.00 0.00 39.82 5.69
294 295 4.292178 GAGGCGGAGATGGCGGAG 62.292 72.222 0.00 0.00 39.82 4.63
312 313 3.092511 GCCATGGCCCTCTCCTCA 61.093 66.667 27.24 0.00 34.56 3.86
313 314 3.117452 GCCATGGCCCTCTCCTCAG 62.117 68.421 27.24 0.00 34.56 3.35
314 315 2.509916 CATGGCCCTCTCCTCAGC 59.490 66.667 0.00 0.00 0.00 4.26
315 316 2.041762 ATGGCCCTCTCCTCAGCA 59.958 61.111 0.00 0.00 0.00 4.41
316 317 2.071262 ATGGCCCTCTCCTCAGCAG 61.071 63.158 0.00 0.00 0.00 4.24
317 318 3.478274 GGCCCTCTCCTCAGCAGG 61.478 72.222 0.00 0.00 42.01 4.85
318 319 4.173924 GCCCTCTCCTCAGCAGGC 62.174 72.222 0.00 0.00 40.12 4.85
319 320 3.847602 CCCTCTCCTCAGCAGGCG 61.848 72.222 0.00 0.00 40.12 5.52
320 321 2.757508 CCTCTCCTCAGCAGGCGA 60.758 66.667 0.00 0.00 40.12 5.54
321 322 2.493973 CTCTCCTCAGCAGGCGAC 59.506 66.667 0.00 0.00 40.12 5.19
322 323 2.036414 TCTCCTCAGCAGGCGACT 59.964 61.111 0.00 0.00 46.44 4.18
332 333 4.609018 AGGCGACTGCGTTGTGCT 62.609 61.111 0.00 0.00 46.63 4.40
333 334 2.736995 GGCGACTGCGTTGTGCTA 60.737 61.111 0.00 0.00 46.63 3.49
334 335 2.470286 GCGACTGCGTTGTGCTAC 59.530 61.111 0.00 0.00 46.63 3.58
335 336 3.011760 GCGACTGCGTTGTGCTACC 62.012 63.158 0.00 0.00 46.63 3.18
336 337 2.716828 CGACTGCGTTGTGCTACCG 61.717 63.158 0.00 0.00 46.63 4.02
337 338 1.663702 GACTGCGTTGTGCTACCGT 60.664 57.895 0.00 0.00 46.63 4.83
338 339 1.615107 GACTGCGTTGTGCTACCGTC 61.615 60.000 0.00 0.00 46.63 4.79
339 340 2.356553 TGCGTTGTGCTACCGTCC 60.357 61.111 0.00 0.00 46.63 4.79
340 341 3.116531 GCGTTGTGCTACCGTCCC 61.117 66.667 0.00 0.00 41.73 4.46
341 342 2.433664 CGTTGTGCTACCGTCCCC 60.434 66.667 0.00 0.00 0.00 4.81
342 343 2.745037 GTTGTGCTACCGTCCCCA 59.255 61.111 0.00 0.00 0.00 4.96
343 344 1.670083 GTTGTGCTACCGTCCCCAC 60.670 63.158 0.00 0.00 0.00 4.61
344 345 2.886134 TTGTGCTACCGTCCCCACC 61.886 63.158 0.00 0.00 0.00 4.61
345 346 3.315949 GTGCTACCGTCCCCACCA 61.316 66.667 0.00 0.00 0.00 4.17
346 347 2.285069 TGCTACCGTCCCCACCAT 60.285 61.111 0.00 0.00 0.00 3.55
347 348 2.363975 TGCTACCGTCCCCACCATC 61.364 63.158 0.00 0.00 0.00 3.51
348 349 2.812499 CTACCGTCCCCACCATCG 59.188 66.667 0.00 0.00 0.00 3.84
349 350 3.441011 CTACCGTCCCCACCATCGC 62.441 68.421 0.00 0.00 0.00 4.58
350 351 3.968837 TACCGTCCCCACCATCGCT 62.969 63.158 0.00 0.00 0.00 4.93
351 352 2.570774 TACCGTCCCCACCATCGCTA 62.571 60.000 0.00 0.00 0.00 4.26
352 353 2.727392 CCGTCCCCACCATCGCTAA 61.727 63.158 0.00 0.00 0.00 3.09
353 354 1.520787 CGTCCCCACCATCGCTAAC 60.521 63.158 0.00 0.00 0.00 2.34
354 355 1.153229 GTCCCCACCATCGCTAACC 60.153 63.158 0.00 0.00 0.00 2.85
355 356 2.192175 CCCCACCATCGCTAACCC 59.808 66.667 0.00 0.00 0.00 4.11
356 357 2.375345 CCCCACCATCGCTAACCCT 61.375 63.158 0.00 0.00 0.00 4.34
357 358 1.153168 CCCACCATCGCTAACCCTG 60.153 63.158 0.00 0.00 0.00 4.45
358 359 1.622607 CCCACCATCGCTAACCCTGA 61.623 60.000 0.00 0.00 0.00 3.86
359 360 0.462047 CCACCATCGCTAACCCTGAC 60.462 60.000 0.00 0.00 0.00 3.51
360 361 0.806102 CACCATCGCTAACCCTGACG 60.806 60.000 0.00 0.00 0.00 4.35
361 362 0.968901 ACCATCGCTAACCCTGACGA 60.969 55.000 0.00 0.00 39.11 4.20
362 363 0.527817 CCATCGCTAACCCTGACGAC 60.528 60.000 0.00 0.00 37.37 4.34
363 364 0.866061 CATCGCTAACCCTGACGACG 60.866 60.000 0.00 0.00 37.37 5.12
364 365 2.609183 ATCGCTAACCCTGACGACGC 62.609 60.000 0.00 0.00 37.37 5.19
365 366 2.508663 GCTAACCCTGACGACGCC 60.509 66.667 0.00 0.00 0.00 5.68
366 367 3.003113 GCTAACCCTGACGACGCCT 62.003 63.158 0.00 0.00 0.00 5.52
367 368 1.153823 CTAACCCTGACGACGCCTG 60.154 63.158 0.00 0.00 0.00 4.85
368 369 3.291101 TAACCCTGACGACGCCTGC 62.291 63.158 0.00 0.00 0.00 4.85
386 387 4.200283 GTCTGAGCCGGCCGAGAG 62.200 72.222 30.73 16.12 0.00 3.20
399 400 2.096596 CGAGAGGTACGTCTGGACC 58.903 63.158 22.12 7.29 35.83 4.46
400 401 0.675837 CGAGAGGTACGTCTGGACCA 60.676 60.000 22.12 0.00 38.27 4.02
401 402 1.542492 GAGAGGTACGTCTGGACCAA 58.458 55.000 22.12 0.00 38.27 3.67
402 403 1.201880 GAGAGGTACGTCTGGACCAAC 59.798 57.143 22.12 2.90 38.27 3.77
403 404 0.245813 GAGGTACGTCTGGACCAACC 59.754 60.000 8.31 4.34 38.27 3.77
415 416 2.839098 CCAACCAGGTGCAGGACT 59.161 61.111 0.00 0.00 0.00 3.85
416 417 1.151450 CCAACCAGGTGCAGGACTT 59.849 57.895 0.00 0.00 0.00 3.01
417 418 0.890996 CCAACCAGGTGCAGGACTTC 60.891 60.000 0.00 0.00 0.00 3.01
418 419 1.071471 AACCAGGTGCAGGACTTCG 59.929 57.895 0.00 0.00 0.00 3.79
419 420 1.696097 AACCAGGTGCAGGACTTCGT 61.696 55.000 0.00 0.00 0.00 3.85
420 421 1.374758 CCAGGTGCAGGACTTCGTC 60.375 63.158 0.00 0.00 0.00 4.20
421 422 1.367471 CAGGTGCAGGACTTCGTCA 59.633 57.895 0.00 0.00 33.68 4.35
422 423 0.668706 CAGGTGCAGGACTTCGTCAG 60.669 60.000 0.00 0.00 33.68 3.51
423 424 2.029844 GGTGCAGGACTTCGTCAGC 61.030 63.158 0.00 0.82 36.28 4.26
424 425 2.029844 GTGCAGGACTTCGTCAGCC 61.030 63.158 0.00 0.00 35.37 4.85
425 426 2.435059 GCAGGACTTCGTCAGCCC 60.435 66.667 0.00 0.00 33.68 5.19
426 427 2.266055 CAGGACTTCGTCAGCCCC 59.734 66.667 0.00 0.00 33.68 5.80
427 428 2.120718 AGGACTTCGTCAGCCCCT 59.879 61.111 0.00 0.00 33.68 4.79
428 429 1.985116 AGGACTTCGTCAGCCCCTC 60.985 63.158 0.00 0.00 33.68 4.30
429 430 2.579738 GACTTCGTCAGCCCCTCC 59.420 66.667 0.00 0.00 32.09 4.30
430 431 3.003763 ACTTCGTCAGCCCCTCCC 61.004 66.667 0.00 0.00 0.00 4.30
431 432 3.787001 CTTCGTCAGCCCCTCCCC 61.787 72.222 0.00 0.00 0.00 4.81
454 455 3.304041 CCATTTGGTTTGGTGCCAC 57.696 52.632 0.00 0.00 35.46 5.01
455 456 0.467384 CCATTTGGTTTGGTGCCACA 59.533 50.000 0.00 0.00 35.46 4.17
456 457 1.580815 CATTTGGTTTGGTGCCACAC 58.419 50.000 0.00 0.00 35.46 3.82
466 467 2.044551 TGCCACACCAGCACACAA 60.045 55.556 0.00 0.00 34.69 3.33
467 468 2.412937 GCCACACCAGCACACAAC 59.587 61.111 0.00 0.00 0.00 3.32
468 469 2.413963 GCCACACCAGCACACAACA 61.414 57.895 0.00 0.00 0.00 3.33
469 470 1.737355 GCCACACCAGCACACAACAT 61.737 55.000 0.00 0.00 0.00 2.71
470 471 0.746063 CCACACCAGCACACAACATT 59.254 50.000 0.00 0.00 0.00 2.71
471 472 1.536496 CCACACCAGCACACAACATTG 60.536 52.381 0.00 0.00 0.00 2.82
472 473 0.746063 ACACCAGCACACAACATTGG 59.254 50.000 0.00 0.00 35.07 3.16
473 474 0.746063 CACCAGCACACAACATTGGT 59.254 50.000 0.00 0.00 42.62 3.67
474 475 0.746063 ACCAGCACACAACATTGGTG 59.254 50.000 0.00 0.00 40.47 4.17
475 476 3.573569 CAGCACACAACATTGGTGG 57.426 52.632 6.65 0.00 40.54 4.61
476 477 0.598158 CAGCACACAACATTGGTGGC 60.598 55.000 6.65 0.00 40.54 5.01
477 478 1.042003 AGCACACAACATTGGTGGCA 61.042 50.000 6.65 0.00 40.54 4.92
478 479 0.598158 GCACACAACATTGGTGGCAG 60.598 55.000 6.65 0.00 40.54 4.85
479 480 0.598158 CACACAACATTGGTGGCAGC 60.598 55.000 10.30 10.30 40.54 5.25
480 481 1.042003 ACACAACATTGGTGGCAGCA 61.042 50.000 16.56 16.56 40.54 4.41
481 482 0.598158 CACAACATTGGTGGCAGCAC 60.598 55.000 20.46 0.00 32.65 4.40
482 483 1.005867 CAACATTGGTGGCAGCACC 60.006 57.895 20.46 1.58 45.20 5.01
515 516 2.277949 GCGCAGACGTCGAGCATA 60.278 61.111 27.31 0.00 42.83 3.14
516 517 1.658717 GCGCAGACGTCGAGCATAT 60.659 57.895 27.31 1.47 42.83 1.78
517 518 1.870268 GCGCAGACGTCGAGCATATG 61.870 60.000 27.31 16.26 42.83 1.78
518 519 0.317020 CGCAGACGTCGAGCATATGA 60.317 55.000 27.31 0.00 33.53 2.15
519 520 1.840181 GCAGACGTCGAGCATATGAA 58.160 50.000 24.66 0.00 0.00 2.57
520 521 2.193447 GCAGACGTCGAGCATATGAAA 58.807 47.619 24.66 0.00 0.00 2.69
521 522 2.603110 GCAGACGTCGAGCATATGAAAA 59.397 45.455 24.66 0.00 0.00 2.29
522 523 3.062099 GCAGACGTCGAGCATATGAAAAA 59.938 43.478 24.66 0.00 0.00 1.94
523 524 4.780324 GCAGACGTCGAGCATATGAAAAAG 60.780 45.833 24.66 0.00 0.00 2.27
524 525 4.562789 CAGACGTCGAGCATATGAAAAAGA 59.437 41.667 10.46 0.00 0.00 2.52
525 526 5.062183 CAGACGTCGAGCATATGAAAAAGAA 59.938 40.000 10.46 0.00 0.00 2.52
526 527 5.289675 AGACGTCGAGCATATGAAAAAGAAG 59.710 40.000 10.46 3.20 0.00 2.85
527 528 5.168569 ACGTCGAGCATATGAAAAAGAAGA 58.831 37.500 6.97 0.00 0.00 2.87
528 529 5.062308 ACGTCGAGCATATGAAAAAGAAGAC 59.938 40.000 6.97 3.24 0.00 3.01
529 530 5.484958 GTCGAGCATATGAAAAAGAAGACG 58.515 41.667 6.97 0.00 0.00 4.18
530 531 4.032900 TCGAGCATATGAAAAAGAAGACGC 59.967 41.667 6.97 0.00 0.00 5.19
531 532 4.264543 AGCATATGAAAAAGAAGACGCG 57.735 40.909 6.97 3.53 0.00 6.01
532 533 2.778386 GCATATGAAAAAGAAGACGCGC 59.222 45.455 5.73 0.00 0.00 6.86
533 534 3.485877 GCATATGAAAAAGAAGACGCGCT 60.486 43.478 5.73 0.50 0.00 5.92
534 535 2.882742 ATGAAAAAGAAGACGCGCTC 57.117 45.000 5.73 2.87 0.00 5.03
535 536 0.506932 TGAAAAAGAAGACGCGCTCG 59.493 50.000 5.73 0.00 42.43 5.03
568 569 1.579429 CCAAAGGGACGAAAAGCGG 59.421 57.895 0.00 0.00 46.49 5.52
569 570 0.887387 CCAAAGGGACGAAAAGCGGA 60.887 55.000 0.00 0.00 46.49 5.54
570 571 0.237498 CAAAGGGACGAAAAGCGGAC 59.763 55.000 0.00 0.00 46.49 4.79
571 572 0.179040 AAAGGGACGAAAAGCGGACA 60.179 50.000 0.00 0.00 46.49 4.02
572 573 0.179040 AAGGGACGAAAAGCGGACAA 60.179 50.000 0.00 0.00 46.49 3.18
573 574 0.179040 AGGGACGAAAAGCGGACAAA 60.179 50.000 0.00 0.00 46.49 2.83
574 575 0.237498 GGGACGAAAAGCGGACAAAG 59.763 55.000 0.00 0.00 46.49 2.77
575 576 0.385598 GGACGAAAAGCGGACAAAGC 60.386 55.000 0.00 0.00 46.49 3.51
576 577 0.306533 GACGAAAAGCGGACAAAGCA 59.693 50.000 0.00 0.00 46.49 3.91
577 578 0.028902 ACGAAAAGCGGACAAAGCAC 59.971 50.000 0.00 0.00 46.49 4.40
578 579 0.028770 CGAAAAGCGGACAAAGCACA 59.971 50.000 0.00 0.00 37.01 4.57
579 580 1.477105 GAAAAGCGGACAAAGCACAC 58.523 50.000 0.00 0.00 37.01 3.82
580 581 0.248458 AAAAGCGGACAAAGCACACG 60.248 50.000 0.00 0.00 37.01 4.49
581 582 1.373590 AAAGCGGACAAAGCACACGT 61.374 50.000 0.00 0.00 37.01 4.49
582 583 1.772063 AAGCGGACAAAGCACACGTC 61.772 55.000 0.00 0.00 37.01 4.34
583 584 2.935955 CGGACAAAGCACACGTCC 59.064 61.111 0.00 0.00 44.79 4.79
584 585 2.935955 GGACAAAGCACACGTCCG 59.064 61.111 0.00 0.00 39.86 4.79
585 586 1.885850 GGACAAAGCACACGTCCGT 60.886 57.895 0.00 0.00 39.86 4.69
586 587 1.433837 GGACAAAGCACACGTCCGTT 61.434 55.000 0.00 0.00 39.86 4.44
587 588 0.375803 GACAAAGCACACGTCCGTTT 59.624 50.000 0.00 0.00 0.00 3.60
588 589 0.098025 ACAAAGCACACGTCCGTTTG 59.902 50.000 1.81 1.81 34.85 2.93
589 590 0.591236 CAAAGCACACGTCCGTTTGG 60.591 55.000 7.93 0.00 0.00 3.28
590 591 1.720694 AAAGCACACGTCCGTTTGGG 61.721 55.000 7.93 0.00 35.24 4.12
591 592 2.879813 AAGCACACGTCCGTTTGGGT 62.880 55.000 7.93 0.00 37.00 4.51
592 593 2.888998 GCACACGTCCGTTTGGGTC 61.889 63.158 7.93 0.00 37.00 4.46
593 594 1.521906 CACACGTCCGTTTGGGTCA 60.522 57.895 0.00 0.00 37.00 4.02
594 595 1.522130 ACACGTCCGTTTGGGTCAC 60.522 57.895 0.00 0.00 37.00 3.67
595 596 2.109593 ACGTCCGTTTGGGTCACC 59.890 61.111 0.00 0.00 37.00 4.02
596 597 2.667199 CGTCCGTTTGGGTCACCC 60.667 66.667 5.63 5.63 45.71 4.61
606 607 3.765968 GGGTCACCCATTTGGAGTT 57.234 52.632 8.52 0.00 44.65 3.01
607 608 1.256812 GGGTCACCCATTTGGAGTTG 58.743 55.000 8.52 0.00 44.65 3.16
608 609 0.603065 GGTCACCCATTTGGAGTTGC 59.397 55.000 0.00 0.00 37.39 4.17
609 610 1.620822 GTCACCCATTTGGAGTTGCT 58.379 50.000 0.00 0.00 37.39 3.91
610 611 1.541588 GTCACCCATTTGGAGTTGCTC 59.458 52.381 0.00 0.00 37.39 4.26
611 612 1.425066 TCACCCATTTGGAGTTGCTCT 59.575 47.619 0.00 0.00 37.39 4.09
612 613 2.642311 TCACCCATTTGGAGTTGCTCTA 59.358 45.455 0.00 0.00 37.39 2.43
613 614 3.073798 TCACCCATTTGGAGTTGCTCTAA 59.926 43.478 0.00 0.00 37.39 2.10
614 615 4.019174 CACCCATTTGGAGTTGCTCTAAT 58.981 43.478 0.00 0.00 37.39 1.73
615 616 5.045213 TCACCCATTTGGAGTTGCTCTAATA 60.045 40.000 0.00 0.00 37.39 0.98
616 617 5.297776 CACCCATTTGGAGTTGCTCTAATAG 59.702 44.000 0.00 0.00 37.39 1.73
617 618 5.191722 ACCCATTTGGAGTTGCTCTAATAGA 59.808 40.000 0.00 0.00 37.39 1.98
618 619 6.126361 ACCCATTTGGAGTTGCTCTAATAGAT 60.126 38.462 0.00 0.00 37.39 1.98
619 620 6.206243 CCCATTTGGAGTTGCTCTAATAGATG 59.794 42.308 0.00 0.00 37.39 2.90
620 621 6.293845 CCATTTGGAGTTGCTCTAATAGATGC 60.294 42.308 0.00 0.00 37.39 3.91
621 622 5.357742 TTGGAGTTGCTCTAATAGATGCA 57.642 39.130 9.31 9.31 30.46 3.96
622 623 5.357742 TGGAGTTGCTCTAATAGATGCAA 57.642 39.130 17.10 17.10 36.64 4.08
623 624 5.744171 TGGAGTTGCTCTAATAGATGCAAA 58.256 37.500 20.39 9.14 38.81 3.68
624 625 6.359804 TGGAGTTGCTCTAATAGATGCAAAT 58.640 36.000 20.39 19.80 38.81 2.32
625 626 7.508687 TGGAGTTGCTCTAATAGATGCAAATA 58.491 34.615 20.39 9.37 38.81 1.40
626 627 7.992608 TGGAGTTGCTCTAATAGATGCAAATAA 59.007 33.333 20.39 12.82 38.81 1.40
627 628 8.286097 GGAGTTGCTCTAATAGATGCAAATAAC 58.714 37.037 20.39 14.81 38.81 1.89
628 629 8.159344 AGTTGCTCTAATAGATGCAAATAACC 57.841 34.615 20.39 12.40 38.81 2.85
629 630 7.775093 AGTTGCTCTAATAGATGCAAATAACCA 59.225 33.333 20.39 3.72 38.81 3.67
630 631 8.571336 GTTGCTCTAATAGATGCAAATAACCAT 58.429 33.333 20.39 0.00 38.81 3.55
631 632 8.102800 TGCTCTAATAGATGCAAATAACCATG 57.897 34.615 10.47 0.00 29.79 3.66
632 633 7.720957 TGCTCTAATAGATGCAAATAACCATGT 59.279 33.333 10.47 0.00 29.79 3.21
633 634 8.571336 GCTCTAATAGATGCAAATAACCATGTT 58.429 33.333 0.00 0.00 0.00 2.71
639 640 7.837202 AGATGCAAATAACCATGTTTCAATG 57.163 32.000 0.00 0.00 0.00 2.82
640 641 7.613585 AGATGCAAATAACCATGTTTCAATGA 58.386 30.769 0.00 0.00 0.00 2.57
641 642 8.262227 AGATGCAAATAACCATGTTTCAATGAT 58.738 29.630 0.00 0.00 0.00 2.45
642 643 8.795842 ATGCAAATAACCATGTTTCAATGATT 57.204 26.923 0.00 0.00 0.00 2.57
643 644 8.254178 TGCAAATAACCATGTTTCAATGATTC 57.746 30.769 0.00 0.00 0.00 2.52
644 645 7.876582 TGCAAATAACCATGTTTCAATGATTCA 59.123 29.630 0.00 0.00 0.00 2.57
645 646 8.719648 GCAAATAACCATGTTTCAATGATTCAA 58.280 29.630 0.00 0.00 0.00 2.69
652 653 9.775854 ACCATGTTTCAATGATTCAAATTTACA 57.224 25.926 0.00 0.00 0.00 2.41
663 664 8.761575 TGATTCAAATTTACAAGAAATCCTGC 57.238 30.769 0.00 0.00 0.00 4.85
664 665 7.541783 TGATTCAAATTTACAAGAAATCCTGCG 59.458 33.333 0.00 0.00 0.00 5.18
665 666 6.567687 TCAAATTTACAAGAAATCCTGCGA 57.432 33.333 0.00 0.00 0.00 5.10
666 667 6.611381 TCAAATTTACAAGAAATCCTGCGAG 58.389 36.000 0.00 0.00 0.00 5.03
667 668 6.206634 TCAAATTTACAAGAAATCCTGCGAGT 59.793 34.615 0.00 0.00 0.00 4.18
668 669 7.389330 TCAAATTTACAAGAAATCCTGCGAGTA 59.611 33.333 0.00 0.00 0.00 2.59
669 670 7.681939 AATTTACAAGAAATCCTGCGAGTAA 57.318 32.000 0.00 0.00 0.00 2.24
670 671 7.865706 ATTTACAAGAAATCCTGCGAGTAAT 57.134 32.000 0.00 0.00 0.00 1.89
671 672 6.903883 TTACAAGAAATCCTGCGAGTAATC 57.096 37.500 0.00 0.00 0.00 1.75
672 673 4.832248 ACAAGAAATCCTGCGAGTAATCA 58.168 39.130 0.00 0.00 0.00 2.57
673 674 4.631813 ACAAGAAATCCTGCGAGTAATCAC 59.368 41.667 0.00 0.00 0.00 3.06
674 675 4.471904 AGAAATCCTGCGAGTAATCACA 57.528 40.909 0.00 0.00 0.00 3.58
675 676 5.028549 AGAAATCCTGCGAGTAATCACAT 57.971 39.130 0.00 0.00 0.00 3.21
676 677 5.431765 AGAAATCCTGCGAGTAATCACATT 58.568 37.500 0.00 0.00 0.00 2.71
677 678 5.882557 AGAAATCCTGCGAGTAATCACATTT 59.117 36.000 0.00 0.00 0.00 2.32
678 679 6.375455 AGAAATCCTGCGAGTAATCACATTTT 59.625 34.615 0.00 0.00 0.00 1.82
679 680 6.515272 AATCCTGCGAGTAATCACATTTTT 57.485 33.333 0.00 0.00 0.00 1.94
748 749 4.008074 ACCTACAGTGATGGTTGTCTTG 57.992 45.455 0.00 0.00 0.00 3.02
749 750 3.391296 ACCTACAGTGATGGTTGTCTTGT 59.609 43.478 0.00 0.00 0.00 3.16
753 771 2.413112 CAGTGATGGTTGTCTTGTAGCG 59.587 50.000 0.00 0.00 0.00 4.26
755 773 1.346395 TGATGGTTGTCTTGTAGCGGT 59.654 47.619 0.00 0.00 0.00 5.68
764 782 0.037697 CTTGTAGCGGTGGTAGCACA 60.038 55.000 25.23 3.01 37.01 4.57
790 818 0.598065 CGGCCAAAAGGAGTCAAAGG 59.402 55.000 2.24 0.00 0.00 3.11
794 822 2.239400 CCAAAAGGAGTCAAAGGGTCC 58.761 52.381 0.00 0.00 0.00 4.46
800 828 0.966920 GAGTCAAAGGGTCCGTGAGA 59.033 55.000 0.00 0.00 0.00 3.27
845 879 0.392193 AGTCTCATCGCCTGCAAAGG 60.392 55.000 0.00 0.00 0.00 3.11
875 913 2.421739 CGTGACCCCATCCCGATC 59.578 66.667 0.00 0.00 0.00 3.69
897 935 2.770048 CCTCCATTCCCTCCGCCT 60.770 66.667 0.00 0.00 0.00 5.52
989 1075 2.107204 AGAGAGAGAGAGATCAGGAGGC 59.893 54.545 0.00 0.00 0.00 4.70
990 1076 1.202806 AGAGAGAGAGATCAGGAGGCG 60.203 57.143 0.00 0.00 0.00 5.52
991 1077 0.823356 AGAGAGAGATCAGGAGGCGC 60.823 60.000 0.00 0.00 0.00 6.53
1027 1113 1.220477 GAGGTGAGCAAGGAGGAGC 59.780 63.158 0.00 0.00 0.00 4.70
1545 1672 1.446272 CAAGGCGTCCGACTTCCTC 60.446 63.158 4.50 0.00 42.42 3.71
1548 1675 2.100603 GCGTCCGACTTCCTCGAG 59.899 66.667 5.13 5.13 46.14 4.04
1694 1821 1.738099 CCGAGGTCTGTCCAAAGCG 60.738 63.158 0.00 0.00 39.02 4.68
1705 1834 0.753479 TCCAAAGCGCCAAACCTTCA 60.753 50.000 2.29 0.00 0.00 3.02
1723 1876 3.876274 TCATCTTCTGTCCTTCCTTCG 57.124 47.619 0.00 0.00 0.00 3.79
1747 1905 6.037940 CGATCAATCTGACTGTCCAATTCATT 59.962 38.462 5.17 0.00 0.00 2.57
1762 1920 5.977725 CCAATTCATTCATCAATCTGACTGC 59.022 40.000 0.00 0.00 0.00 4.40
1796 1954 2.520536 GCAGGACGGGCCATATCCT 61.521 63.158 14.40 14.40 43.95 3.24
1894 2085 4.801914 GCCATGCTCATGCTATCAGTCTTA 60.802 45.833 4.40 0.00 40.48 2.10
1903 2099 9.853555 CTCATGCTATCAGTCTTATTTACCTAG 57.146 37.037 0.00 0.00 0.00 3.02
1984 5089 8.865090 AGATTAATCTGTTGCTATGCTACTACT 58.135 33.333 17.26 0.00 35.51 2.57
1998 5103 9.914131 CTATGCTACTACTATTTGTGCTCAATA 57.086 33.333 1.43 0.00 33.32 1.90
2000 5105 8.420374 TGCTACTACTATTTGTGCTCAATAAC 57.580 34.615 1.43 0.00 33.32 1.89
2045 5150 6.537355 TCTTTCTGGATCACTTCATCAGTTT 58.463 36.000 0.00 0.00 30.92 2.66
2090 5201 1.863454 CGGTCTGCATCTTATCTGTGC 59.137 52.381 0.00 0.00 39.26 4.57
2100 5211 3.695816 TCTTATCTGTGCGACAATCGAG 58.304 45.455 1.69 0.00 43.74 4.04
2121 5232 5.293324 CGAGTCGAATGTCAAATTTGGGATA 59.707 40.000 17.90 0.00 0.00 2.59
2164 5279 6.570672 ATCATATCCTGTGATGTCATTTGC 57.429 37.500 0.00 0.00 35.12 3.68
2181 5296 2.309136 TGCATCGATCCTAGGATGGA 57.691 50.000 31.38 31.38 42.03 3.41
2196 5311 8.876181 TCCTAGGATGGAAATTGATATTAACGA 58.124 33.333 7.62 0.00 32.39 3.85
2197 5312 9.672673 CCTAGGATGGAAATTGATATTAACGAT 57.327 33.333 1.05 0.00 0.00 3.73
2205 5320 9.683069 GGAAATTGATATTAACGATTGCATTCT 57.317 29.630 7.00 0.00 0.00 2.40
2214 5329 2.095059 ACGATTGCATTCTCCAGTTTGC 60.095 45.455 7.00 0.00 35.67 3.68
2227 5342 5.241506 TCTCCAGTTTGCATTTTGTTCTAGG 59.758 40.000 0.00 0.00 0.00 3.02
2296 5415 4.348461 TCCTACATGCCGGTTAATTATCCA 59.652 41.667 1.90 0.00 0.00 3.41
2303 5422 3.552068 GCCGGTTAATTATCCAATGCACC 60.552 47.826 1.90 1.83 0.00 5.01
2310 5429 9.777297 GGTTAATTATCCAATGCACCATTAATT 57.223 29.630 7.57 0.00 32.35 1.40
2335 5454 6.072893 TGTCAAAGGCGAATTTAACTAGTTCC 60.073 38.462 12.39 5.25 0.00 3.62
2375 5494 9.571810 TGATTTGAATTCATTTCCGTAAGATTG 57.428 29.630 9.40 0.00 33.28 2.67
2385 5504 8.463607 TCATTTCCGTAAGATTGGTAATTTTCC 58.536 33.333 0.00 0.00 43.02 3.13
2392 5511 3.448660 AGATTGGTAATTTTCCAGCTGCC 59.551 43.478 8.66 1.60 36.28 4.85
2549 5694 5.823209 TGCTATGTTTGATCATGTTCTGG 57.177 39.130 0.00 0.00 0.00 3.86
2553 5698 6.016860 GCTATGTTTGATCATGTTCTGGCATA 60.017 38.462 0.00 8.90 0.00 3.14
2554 5699 5.565592 TGTTTGATCATGTTCTGGCATAC 57.434 39.130 0.00 0.00 0.00 2.39
2589 5734 8.230472 CAATTCTAGGATTGGTAGCAATCTTT 57.770 34.615 34.42 27.04 40.42 2.52
2653 5799 5.496133 CTGAAAGGCATAACAGGATTCTG 57.504 43.478 0.00 0.00 46.10 3.02
2721 5867 4.647564 AGTCACCAAGAAACTCATGGAT 57.352 40.909 5.00 0.00 37.42 3.41
2728 5874 4.158949 CCAAGAAACTCATGGATTGCATCA 59.841 41.667 0.00 0.00 37.42 3.07
2741 5887 2.375014 TGCATCATACTCCCTCCGTA 57.625 50.000 0.00 0.00 0.00 4.02
2742 5888 2.239400 TGCATCATACTCCCTCCGTAG 58.761 52.381 0.00 0.00 0.00 3.51
2754 5900 5.185442 ACTCCCTCCGTAGCTAAATATAAGC 59.815 44.000 0.00 2.45 40.40 3.09
2755 5901 5.081728 TCCCTCCGTAGCTAAATATAAGCA 58.918 41.667 11.42 0.00 42.62 3.91
2756 5902 5.720041 TCCCTCCGTAGCTAAATATAAGCAT 59.280 40.000 11.42 1.75 42.62 3.79
2790 5936 6.754702 TCCAATATAGACTACATACCGAGC 57.245 41.667 0.00 0.00 0.00 5.03
2791 5937 6.482524 TCCAATATAGACTACATACCGAGCT 58.517 40.000 0.00 0.00 0.00 4.09
2792 5938 7.627311 TCCAATATAGACTACATACCGAGCTA 58.373 38.462 0.00 0.00 0.00 3.32
2793 5939 8.105197 TCCAATATAGACTACATACCGAGCTAA 58.895 37.037 0.00 0.00 0.00 3.09
2794 5940 8.737175 CCAATATAGACTACATACCGAGCTAAA 58.263 37.037 0.00 0.00 0.00 1.85
2797 5943 7.997773 ATAGACTACATACCGAGCTAAATGA 57.002 36.000 0.00 0.00 0.00 2.57
2798 5944 6.710597 AGACTACATACCGAGCTAAATGAA 57.289 37.500 0.00 0.00 0.00 2.57
2799 5945 7.291411 AGACTACATACCGAGCTAAATGAAT 57.709 36.000 0.00 0.00 0.00 2.57
2800 5946 7.148641 AGACTACATACCGAGCTAAATGAATG 58.851 38.462 0.00 0.00 0.00 2.67
2801 5947 7.014326 AGACTACATACCGAGCTAAATGAATGA 59.986 37.037 0.00 0.00 0.00 2.57
2802 5948 7.497595 ACTACATACCGAGCTAAATGAATGAA 58.502 34.615 0.00 0.00 0.00 2.57
2803 5949 8.150945 ACTACATACCGAGCTAAATGAATGAAT 58.849 33.333 0.00 0.00 0.00 2.57
2804 5950 7.194607 ACATACCGAGCTAAATGAATGAATG 57.805 36.000 0.00 0.00 0.00 2.67
2805 5951 6.767902 ACATACCGAGCTAAATGAATGAATGT 59.232 34.615 0.00 0.00 0.00 2.71
2806 5952 7.931407 ACATACCGAGCTAAATGAATGAATGTA 59.069 33.333 0.00 0.00 0.00 2.29
2807 5953 6.604735 ACCGAGCTAAATGAATGAATGTAC 57.395 37.500 0.00 0.00 0.00 2.90
2808 5954 6.112734 ACCGAGCTAAATGAATGAATGTACA 58.887 36.000 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.961511 TCGTGTGCCCGCTGTGTC 62.962 66.667 0.00 0.00 0.00 3.67
4 5 4.539083 TTGTCGTGTGCCCGCTGT 62.539 61.111 0.00 0.00 0.00 4.40
7 8 4.980805 TCCTTGTCGTGTGCCCGC 62.981 66.667 0.00 0.00 0.00 6.13
11 12 2.607892 GCACCTCCTTGTCGTGTGC 61.608 63.158 0.00 0.00 44.53 4.57
13 14 2.029073 CGCACCTCCTTGTCGTGT 59.971 61.111 0.00 0.00 0.00 4.49
14 15 3.414700 GCGCACCTCCTTGTCGTG 61.415 66.667 0.30 0.00 0.00 4.35
15 16 3.865929 CTGCGCACCTCCTTGTCGT 62.866 63.158 5.66 0.00 0.00 4.34
17 18 2.743928 CCTGCGCACCTCCTTGTC 60.744 66.667 5.66 0.00 0.00 3.18
64 65 2.588034 GCGTACTCGGGAATGGCC 60.588 66.667 0.00 0.00 37.56 5.36
65 66 2.588034 GGCGTACTCGGGAATGGC 60.588 66.667 0.00 0.00 37.56 4.40
66 67 1.727511 TACGGCGTACTCGGGAATGG 61.728 60.000 16.97 0.00 37.56 3.16
67 68 0.317603 CTACGGCGTACTCGGGAATG 60.318 60.000 16.97 0.00 37.56 2.67
68 69 1.450531 CCTACGGCGTACTCGGGAAT 61.451 60.000 16.97 0.00 37.56 3.01
69 70 2.114670 CCTACGGCGTACTCGGGAA 61.115 63.158 16.97 0.00 37.56 3.97
70 71 2.514592 CCTACGGCGTACTCGGGA 60.515 66.667 16.97 0.00 37.56 5.14
71 72 4.261781 GCCTACGGCGTACTCGGG 62.262 72.222 16.97 16.52 39.62 5.14
81 82 1.517832 CAGTTGGGAGAGCCTACGG 59.482 63.158 0.00 0.00 0.00 4.02
82 83 1.517832 CCAGTTGGGAGAGCCTACG 59.482 63.158 0.00 0.00 40.01 3.51
93 94 2.845345 AACCAGGCCTCCCAGTTGG 61.845 63.158 0.00 1.95 31.11 3.77
94 95 1.604593 CAACCAGGCCTCCCAGTTG 60.605 63.158 0.00 11.13 39.62 3.16
95 96 2.084930 ACAACCAGGCCTCCCAGTT 61.085 57.895 0.00 1.09 32.07 3.16
96 97 2.450502 ACAACCAGGCCTCCCAGT 60.451 61.111 0.00 0.00 0.00 4.00
97 98 2.034687 CACAACCAGGCCTCCCAG 59.965 66.667 0.00 0.00 0.00 4.45
98 99 4.284550 GCACAACCAGGCCTCCCA 62.285 66.667 0.00 0.00 0.00 4.37
100 101 4.643387 ACGCACAACCAGGCCTCC 62.643 66.667 0.00 0.00 0.00 4.30
101 102 3.357079 CACGCACAACCAGGCCTC 61.357 66.667 0.00 0.00 0.00 4.70
104 105 4.332637 CTGCACGCACAACCAGGC 62.333 66.667 0.00 0.00 0.00 4.85
105 106 4.332637 GCTGCACGCACAACCAGG 62.333 66.667 0.00 0.00 38.92 4.45
106 107 4.671549 CGCTGCACGCACAACCAG 62.672 66.667 0.00 0.00 39.08 4.00
124 125 4.096003 AGGGGGTTCGCGTGATGG 62.096 66.667 5.77 0.00 0.00 3.51
125 126 2.819595 CAGGGGGTTCGCGTGATG 60.820 66.667 5.77 0.00 34.86 3.07
126 127 4.778143 GCAGGGGGTTCGCGTGAT 62.778 66.667 5.77 0.00 34.86 3.06
142 143 4.452733 CTTGACGACGGGGGAGGC 62.453 72.222 0.00 0.00 0.00 4.70
143 144 4.452733 GCTTGACGACGGGGGAGG 62.453 72.222 0.00 0.00 0.00 4.30
144 145 4.452733 GGCTTGACGACGGGGGAG 62.453 72.222 0.00 0.00 0.00 4.30
146 147 4.760047 CTGGCTTGACGACGGGGG 62.760 72.222 0.00 0.00 0.00 5.40
147 148 3.649277 CTCTGGCTTGACGACGGGG 62.649 68.421 0.00 0.00 0.00 5.73
148 149 2.125912 CTCTGGCTTGACGACGGG 60.126 66.667 0.00 0.00 0.00 5.28
149 150 2.125912 CCTCTGGCTTGACGACGG 60.126 66.667 0.00 0.00 0.00 4.79
150 151 1.153939 CTCCTCTGGCTTGACGACG 60.154 63.158 0.00 0.00 0.00 5.12
151 152 1.216710 CCTCCTCTGGCTTGACGAC 59.783 63.158 0.00 0.00 0.00 4.34
152 153 0.967887 CTCCTCCTCTGGCTTGACGA 60.968 60.000 0.00 0.00 0.00 4.20
153 154 1.515020 CTCCTCCTCTGGCTTGACG 59.485 63.158 0.00 0.00 0.00 4.35
154 155 0.616111 TCCTCCTCCTCTGGCTTGAC 60.616 60.000 0.00 0.00 0.00 3.18
155 156 0.117140 TTCCTCCTCCTCTGGCTTGA 59.883 55.000 0.00 0.00 0.00 3.02
156 157 0.540923 CTTCCTCCTCCTCTGGCTTG 59.459 60.000 0.00 0.00 0.00 4.01
157 158 1.271127 GCTTCCTCCTCCTCTGGCTT 61.271 60.000 0.00 0.00 0.00 4.35
158 159 1.688884 GCTTCCTCCTCCTCTGGCT 60.689 63.158 0.00 0.00 0.00 4.75
159 160 2.741055 GGCTTCCTCCTCCTCTGGC 61.741 68.421 0.00 0.00 0.00 4.85
160 161 2.430610 CGGCTTCCTCCTCCTCTGG 61.431 68.421 0.00 0.00 0.00 3.86
161 162 1.380515 TCGGCTTCCTCCTCCTCTG 60.381 63.158 0.00 0.00 0.00 3.35
162 163 1.076339 CTCGGCTTCCTCCTCCTCT 60.076 63.158 0.00 0.00 0.00 3.69
163 164 2.131067 CCTCGGCTTCCTCCTCCTC 61.131 68.421 0.00 0.00 0.00 3.71
164 165 2.042435 CCTCGGCTTCCTCCTCCT 60.042 66.667 0.00 0.00 0.00 3.69
165 166 3.855853 GCCTCGGCTTCCTCCTCC 61.856 72.222 0.00 0.00 38.26 4.30
166 167 4.214327 CGCCTCGGCTTCCTCCTC 62.214 72.222 6.35 0.00 39.32 3.71
178 179 3.081409 TTCCTGGTAGCCCGCCTC 61.081 66.667 0.00 0.00 0.00 4.70
179 180 3.083997 CTTCCTGGTAGCCCGCCT 61.084 66.667 0.00 0.00 0.00 5.52
180 181 4.858680 GCTTCCTGGTAGCCCGCC 62.859 72.222 13.79 0.00 32.45 6.13
183 184 3.787001 AGCGCTTCCTGGTAGCCC 61.787 66.667 18.15 10.44 35.18 5.19
184 185 2.512515 CAGCGCTTCCTGGTAGCC 60.513 66.667 18.15 11.53 35.18 3.93
185 186 2.512515 CCAGCGCTTCCTGGTAGC 60.513 66.667 7.50 14.64 45.87 3.58
204 205 1.153147 GGATTCGGTGAAGGCCTCC 60.153 63.158 5.23 1.21 0.00 4.30
205 206 0.181350 ATGGATTCGGTGAAGGCCTC 59.819 55.000 5.23 0.00 0.00 4.70
206 207 0.181350 GATGGATTCGGTGAAGGCCT 59.819 55.000 0.00 0.00 0.00 5.19
207 208 1.160329 CGATGGATTCGGTGAAGGCC 61.160 60.000 0.00 0.00 44.28 5.19
208 209 2.311294 CGATGGATTCGGTGAAGGC 58.689 57.895 0.00 0.00 44.28 4.35
221 222 2.892425 GCCGCTCCAACTCGATGG 60.892 66.667 0.00 0.00 42.12 3.51
222 223 3.257561 CGCCGCTCCAACTCGATG 61.258 66.667 0.00 0.00 0.00 3.84
223 224 4.514577 CCGCCGCTCCAACTCGAT 62.515 66.667 0.00 0.00 0.00 3.59
225 226 4.735132 TTCCGCCGCTCCAACTCG 62.735 66.667 0.00 0.00 0.00 4.18
226 227 2.815647 CTTCCGCCGCTCCAACTC 60.816 66.667 0.00 0.00 0.00 3.01
227 228 3.311110 TCTTCCGCCGCTCCAACT 61.311 61.111 0.00 0.00 0.00 3.16
228 229 3.119096 GTCTTCCGCCGCTCCAAC 61.119 66.667 0.00 0.00 0.00 3.77
229 230 4.388499 GGTCTTCCGCCGCTCCAA 62.388 66.667 0.00 0.00 0.00 3.53
247 248 3.793144 CTCCGCTGTTGCCGCTTC 61.793 66.667 0.00 0.00 35.36 3.86
262 263 4.253257 CTCGTACGCGGCCTCCTC 62.253 72.222 12.47 0.00 38.89 3.71
271 272 2.353607 CATCTCCGCCTCGTACGC 60.354 66.667 11.24 0.00 0.00 4.42
272 273 2.331805 CCATCTCCGCCTCGTACG 59.668 66.667 9.53 9.53 0.00 3.67
273 274 2.027751 GCCATCTCCGCCTCGTAC 59.972 66.667 0.00 0.00 0.00 3.67
274 275 3.592814 CGCCATCTCCGCCTCGTA 61.593 66.667 0.00 0.00 0.00 3.43
277 278 4.292178 CTCCGCCATCTCCGCCTC 62.292 72.222 0.00 0.00 0.00 4.70
295 296 3.092511 TGAGGAGAGGGCCATGGC 61.093 66.667 29.47 29.47 41.06 4.40
296 297 3.117452 GCTGAGGAGAGGGCCATGG 62.117 68.421 7.63 7.63 0.00 3.66
297 298 2.326773 CTGCTGAGGAGAGGGCCATG 62.327 65.000 6.18 0.00 0.00 3.66
298 299 2.041762 TGCTGAGGAGAGGGCCAT 59.958 61.111 6.18 0.00 0.00 4.40
299 300 2.686470 CTGCTGAGGAGAGGGCCA 60.686 66.667 6.18 0.00 0.00 5.36
300 301 3.478274 CCTGCTGAGGAGAGGGCC 61.478 72.222 1.31 0.00 42.93 5.80
301 302 4.173924 GCCTGCTGAGGAGAGGGC 62.174 72.222 1.31 0.00 42.93 5.19
302 303 3.847602 CGCCTGCTGAGGAGAGGG 61.848 72.222 1.31 0.00 41.61 4.30
303 304 2.757508 TCGCCTGCTGAGGAGAGG 60.758 66.667 1.31 0.00 42.79 3.69
305 306 2.036414 AGTCGCCTGCTGAGGAGA 59.964 61.111 1.31 0.00 45.22 3.71
306 307 2.183811 CAGTCGCCTGCTGAGGAG 59.816 66.667 0.00 0.00 42.93 3.69
314 315 4.374702 GCACAACGCAGTCGCCTG 62.375 66.667 0.00 0.00 45.00 4.85
315 316 3.220999 TAGCACAACGCAGTCGCCT 62.221 57.895 0.00 0.00 45.00 5.52
316 317 2.736995 TAGCACAACGCAGTCGCC 60.737 61.111 0.00 0.00 45.00 5.54
317 318 2.470286 GTAGCACAACGCAGTCGC 59.530 61.111 0.00 0.00 45.00 5.19
318 319 2.716828 CGGTAGCACAACGCAGTCG 61.717 63.158 0.00 0.00 45.00 4.18
319 320 1.615107 GACGGTAGCACAACGCAGTC 61.615 60.000 0.00 0.00 45.00 3.51
321 322 2.380410 GGACGGTAGCACAACGCAG 61.380 63.158 0.00 0.00 46.13 5.18
322 323 2.356553 GGACGGTAGCACAACGCA 60.357 61.111 0.00 0.00 46.13 5.24
323 324 3.116531 GGGACGGTAGCACAACGC 61.117 66.667 0.00 0.00 42.91 4.84
324 325 2.433664 GGGGACGGTAGCACAACG 60.434 66.667 0.00 0.00 0.00 4.10
325 326 1.670083 GTGGGGACGGTAGCACAAC 60.670 63.158 0.00 0.00 0.00 3.32
326 327 2.745037 GTGGGGACGGTAGCACAA 59.255 61.111 0.00 0.00 0.00 3.33
327 328 3.315949 GGTGGGGACGGTAGCACA 61.316 66.667 0.00 0.00 0.00 4.57
328 329 2.588856 GATGGTGGGGACGGTAGCAC 62.589 65.000 0.00 0.00 0.00 4.40
329 330 2.285069 ATGGTGGGGACGGTAGCA 60.285 61.111 0.00 0.00 0.00 3.49
330 331 2.504519 GATGGTGGGGACGGTAGC 59.495 66.667 0.00 0.00 0.00 3.58
331 332 2.812499 CGATGGTGGGGACGGTAG 59.188 66.667 0.00 0.00 0.00 3.18
332 333 2.570774 TAGCGATGGTGGGGACGGTA 62.571 60.000 0.00 0.00 37.61 4.02
333 334 3.968837 TAGCGATGGTGGGGACGGT 62.969 63.158 0.00 0.00 39.60 4.83
334 335 2.727392 TTAGCGATGGTGGGGACGG 61.727 63.158 0.00 0.00 0.00 4.79
335 336 1.520787 GTTAGCGATGGTGGGGACG 60.521 63.158 0.00 0.00 0.00 4.79
336 337 1.153229 GGTTAGCGATGGTGGGGAC 60.153 63.158 0.00 0.00 0.00 4.46
337 338 2.372074 GGGTTAGCGATGGTGGGGA 61.372 63.158 0.00 0.00 0.00 4.81
338 339 2.192175 GGGTTAGCGATGGTGGGG 59.808 66.667 0.00 0.00 0.00 4.96
339 340 1.153168 CAGGGTTAGCGATGGTGGG 60.153 63.158 0.00 0.00 0.00 4.61
340 341 0.462047 GTCAGGGTTAGCGATGGTGG 60.462 60.000 0.00 0.00 0.00 4.61
341 342 0.806102 CGTCAGGGTTAGCGATGGTG 60.806 60.000 0.00 0.00 0.00 4.17
342 343 0.968901 TCGTCAGGGTTAGCGATGGT 60.969 55.000 0.00 0.00 0.00 3.55
343 344 0.527817 GTCGTCAGGGTTAGCGATGG 60.528 60.000 0.00 0.00 35.78 3.51
344 345 0.866061 CGTCGTCAGGGTTAGCGATG 60.866 60.000 0.00 0.00 35.78 3.84
345 346 1.432251 CGTCGTCAGGGTTAGCGAT 59.568 57.895 0.00 0.00 35.78 4.58
346 347 2.872557 CGTCGTCAGGGTTAGCGA 59.127 61.111 0.00 0.00 0.00 4.93
347 348 2.879462 GCGTCGTCAGGGTTAGCG 60.879 66.667 0.00 0.00 0.00 4.26
348 349 2.508663 GGCGTCGTCAGGGTTAGC 60.509 66.667 0.00 0.00 0.00 3.09
349 350 1.153823 CAGGCGTCGTCAGGGTTAG 60.154 63.158 0.00 0.00 0.00 2.34
350 351 2.967397 CAGGCGTCGTCAGGGTTA 59.033 61.111 0.00 0.00 0.00 2.85
351 352 4.681978 GCAGGCGTCGTCAGGGTT 62.682 66.667 0.00 0.00 0.00 4.11
369 370 4.200283 CTCTCGGCCGGCTCAGAC 62.200 72.222 28.56 8.15 0.00 3.51
372 373 4.435970 TACCTCTCGGCCGGCTCA 62.436 66.667 28.56 12.30 0.00 4.26
373 374 3.902086 GTACCTCTCGGCCGGCTC 61.902 72.222 28.56 15.77 0.00 4.70
376 377 3.885521 GACGTACCTCTCGGCCGG 61.886 72.222 27.83 16.54 33.61 6.13
377 378 2.823147 AGACGTACCTCTCGGCCG 60.823 66.667 22.12 22.12 36.97 6.13
378 379 2.772691 CCAGACGTACCTCTCGGCC 61.773 68.421 0.00 0.00 36.97 6.13
379 380 1.748122 TCCAGACGTACCTCTCGGC 60.748 63.158 0.00 0.00 36.48 5.54
380 381 1.375098 GGTCCAGACGTACCTCTCGG 61.375 65.000 0.00 0.00 32.72 4.63
381 382 0.675837 TGGTCCAGACGTACCTCTCG 60.676 60.000 6.77 0.00 36.67 4.04
382 383 1.201880 GTTGGTCCAGACGTACCTCTC 59.798 57.143 6.77 0.00 36.67 3.20
383 384 1.254954 GTTGGTCCAGACGTACCTCT 58.745 55.000 6.77 0.00 36.67 3.69
384 385 0.245813 GGTTGGTCCAGACGTACCTC 59.754 60.000 6.77 0.86 36.67 3.85
385 386 0.470456 TGGTTGGTCCAGACGTACCT 60.470 55.000 16.26 0.00 41.93 3.08
386 387 2.051941 TGGTTGGTCCAGACGTACC 58.948 57.895 11.12 11.12 41.93 3.34
398 399 0.890996 GAAGTCCTGCACCTGGTTGG 60.891 60.000 0.00 0.00 42.93 3.77
399 400 1.230635 CGAAGTCCTGCACCTGGTTG 61.231 60.000 0.00 0.00 0.00 3.77
400 401 1.071471 CGAAGTCCTGCACCTGGTT 59.929 57.895 0.00 0.00 0.00 3.67
401 402 2.140792 ACGAAGTCCTGCACCTGGT 61.141 57.895 0.00 0.00 29.74 4.00
402 403 2.743718 ACGAAGTCCTGCACCTGG 59.256 61.111 0.00 0.00 29.74 4.45
414 415 3.787001 GGGGAGGGGCTGACGAAG 61.787 72.222 0.00 0.00 0.00 3.79
436 437 0.467384 TGTGGCACCAAACCAAATGG 59.533 50.000 16.26 0.00 43.84 3.16
437 438 1.580815 GTGTGGCACCAAACCAAATG 58.419 50.000 16.26 0.00 39.39 2.32
449 450 2.044551 TTGTGTGCTGGTGTGGCA 60.045 55.556 0.00 0.00 37.36 4.92
450 451 1.737355 ATGTTGTGTGCTGGTGTGGC 61.737 55.000 0.00 0.00 0.00 5.01
451 452 0.746063 AATGTTGTGTGCTGGTGTGG 59.254 50.000 0.00 0.00 0.00 4.17
452 453 1.536496 CCAATGTTGTGTGCTGGTGTG 60.536 52.381 0.00 0.00 0.00 3.82
453 454 0.746063 CCAATGTTGTGTGCTGGTGT 59.254 50.000 0.00 0.00 0.00 4.16
454 455 0.746063 ACCAATGTTGTGTGCTGGTG 59.254 50.000 0.00 0.00 38.95 4.17
455 456 0.746063 CACCAATGTTGTGTGCTGGT 59.254 50.000 0.00 0.00 41.08 4.00
456 457 0.032403 CCACCAATGTTGTGTGCTGG 59.968 55.000 8.11 0.00 31.97 4.85
457 458 0.598158 GCCACCAATGTTGTGTGCTG 60.598 55.000 8.11 0.70 31.97 4.41
458 459 1.042003 TGCCACCAATGTTGTGTGCT 61.042 50.000 8.11 0.00 31.97 4.40
459 460 0.598158 CTGCCACCAATGTTGTGTGC 60.598 55.000 8.11 0.00 31.97 4.57
460 461 0.598158 GCTGCCACCAATGTTGTGTG 60.598 55.000 0.00 7.13 32.64 3.82
461 462 1.042003 TGCTGCCACCAATGTTGTGT 61.042 50.000 0.00 0.00 0.00 3.72
462 463 0.598158 GTGCTGCCACCAATGTTGTG 60.598 55.000 0.00 0.00 35.92 3.33
463 464 1.741525 GTGCTGCCACCAATGTTGT 59.258 52.632 0.00 0.00 35.92 3.32
464 465 4.659480 GTGCTGCCACCAATGTTG 57.341 55.556 0.00 0.00 35.92 3.33
498 499 1.658717 ATATGCTCGACGTCTGCGC 60.659 57.895 14.70 13.70 42.83 6.09
499 500 0.317020 TCATATGCTCGACGTCTGCG 60.317 55.000 14.70 0.70 44.93 5.18
500 501 1.840181 TTCATATGCTCGACGTCTGC 58.160 50.000 14.70 17.33 0.00 4.26
501 502 4.562789 TCTTTTTCATATGCTCGACGTCTG 59.437 41.667 14.70 7.51 0.00 3.51
502 503 4.744570 TCTTTTTCATATGCTCGACGTCT 58.255 39.130 14.70 0.00 0.00 4.18
503 504 5.288712 TCTTCTTTTTCATATGCTCGACGTC 59.711 40.000 5.18 5.18 0.00 4.34
504 505 5.062308 GTCTTCTTTTTCATATGCTCGACGT 59.938 40.000 0.00 0.00 0.00 4.34
505 506 5.484958 GTCTTCTTTTTCATATGCTCGACG 58.515 41.667 0.00 0.00 0.00 5.12
506 507 5.484958 CGTCTTCTTTTTCATATGCTCGAC 58.515 41.667 0.00 0.00 0.00 4.20
507 508 4.032900 GCGTCTTCTTTTTCATATGCTCGA 59.967 41.667 0.00 0.00 0.00 4.04
508 509 4.266945 GCGTCTTCTTTTTCATATGCTCG 58.733 43.478 0.00 0.00 0.00 5.03
509 510 4.266945 CGCGTCTTCTTTTTCATATGCTC 58.733 43.478 0.00 0.00 0.00 4.26
510 511 3.485877 GCGCGTCTTCTTTTTCATATGCT 60.486 43.478 8.43 0.00 0.00 3.79
511 512 2.778386 GCGCGTCTTCTTTTTCATATGC 59.222 45.455 8.43 0.00 0.00 3.14
512 513 4.264543 AGCGCGTCTTCTTTTTCATATG 57.735 40.909 8.43 0.00 0.00 1.78
513 514 3.000322 CGAGCGCGTCTTCTTTTTCATAT 60.000 43.478 8.43 0.00 0.00 1.78
514 515 2.344441 CGAGCGCGTCTTCTTTTTCATA 59.656 45.455 8.43 0.00 0.00 2.15
515 516 1.126846 CGAGCGCGTCTTCTTTTTCAT 59.873 47.619 8.43 0.00 0.00 2.57
516 517 0.506932 CGAGCGCGTCTTCTTTTTCA 59.493 50.000 8.43 0.00 0.00 2.69
517 518 3.260058 CGAGCGCGTCTTCTTTTTC 57.740 52.632 8.43 0.00 0.00 2.29
540 541 4.740822 CCCTTTGGGTCGGCCAGG 62.741 72.222 9.07 6.09 38.25 4.45
541 542 3.646715 TCCCTTTGGGTCGGCCAG 61.647 66.667 9.07 0.00 44.74 4.85
542 543 3.961414 GTCCCTTTGGGTCGGCCA 61.961 66.667 9.07 0.00 44.74 5.36
547 548 0.596577 GCTTTTCGTCCCTTTGGGTC 59.403 55.000 2.25 0.00 44.74 4.46
548 549 1.170290 CGCTTTTCGTCCCTTTGGGT 61.170 55.000 2.25 0.00 44.74 4.51
549 550 1.579429 CGCTTTTCGTCCCTTTGGG 59.421 57.895 0.00 0.00 46.11 4.12
550 551 0.887387 TCCGCTTTTCGTCCCTTTGG 60.887 55.000 0.00 0.00 36.19 3.28
551 552 0.237498 GTCCGCTTTTCGTCCCTTTG 59.763 55.000 0.00 0.00 36.19 2.77
552 553 0.179040 TGTCCGCTTTTCGTCCCTTT 60.179 50.000 0.00 0.00 36.19 3.11
553 554 0.179040 TTGTCCGCTTTTCGTCCCTT 60.179 50.000 0.00 0.00 36.19 3.95
554 555 0.179040 TTTGTCCGCTTTTCGTCCCT 60.179 50.000 0.00 0.00 36.19 4.20
555 556 0.237498 CTTTGTCCGCTTTTCGTCCC 59.763 55.000 0.00 0.00 36.19 4.46
556 557 0.385598 GCTTTGTCCGCTTTTCGTCC 60.386 55.000 0.00 0.00 36.19 4.79
557 558 0.306533 TGCTTTGTCCGCTTTTCGTC 59.693 50.000 0.00 0.00 36.19 4.20
558 559 0.028902 GTGCTTTGTCCGCTTTTCGT 59.971 50.000 0.00 0.00 36.19 3.85
559 560 0.028770 TGTGCTTTGTCCGCTTTTCG 59.971 50.000 0.00 0.00 38.08 3.46
560 561 1.477105 GTGTGCTTTGTCCGCTTTTC 58.523 50.000 0.00 0.00 0.00 2.29
561 562 0.248458 CGTGTGCTTTGTCCGCTTTT 60.248 50.000 0.00 0.00 0.00 2.27
562 563 1.355210 CGTGTGCTTTGTCCGCTTT 59.645 52.632 0.00 0.00 0.00 3.51
563 564 1.772063 GACGTGTGCTTTGTCCGCTT 61.772 55.000 0.00 0.00 0.00 4.68
564 565 2.203015 ACGTGTGCTTTGTCCGCT 60.203 55.556 0.00 0.00 0.00 5.52
565 566 2.248431 GACGTGTGCTTTGTCCGC 59.752 61.111 0.00 0.00 0.00 5.54
566 567 2.935955 GGACGTGTGCTTTGTCCG 59.064 61.111 0.00 0.00 42.42 4.79
567 568 1.433837 AACGGACGTGTGCTTTGTCC 61.434 55.000 0.00 0.55 46.91 4.02
568 569 0.375803 AAACGGACGTGTGCTTTGTC 59.624 50.000 0.00 0.00 0.00 3.18
569 570 0.098025 CAAACGGACGTGTGCTTTGT 59.902 50.000 1.69 0.00 0.00 2.83
570 571 0.591236 CCAAACGGACGTGTGCTTTG 60.591 55.000 9.43 4.63 32.22 2.77
571 572 1.720694 CCCAAACGGACGTGTGCTTT 61.721 55.000 9.43 0.00 32.22 3.51
572 573 2.184167 CCCAAACGGACGTGTGCTT 61.184 57.895 9.43 0.00 32.22 3.91
573 574 2.590575 CCCAAACGGACGTGTGCT 60.591 61.111 9.43 0.00 32.22 4.40
574 575 2.888998 GACCCAAACGGACGTGTGC 61.889 63.158 9.43 0.00 32.22 4.57
575 576 1.521906 TGACCCAAACGGACGTGTG 60.522 57.895 8.01 8.01 33.32 3.82
576 577 1.522130 GTGACCCAAACGGACGTGT 60.522 57.895 0.00 0.00 34.64 4.49
577 578 2.248835 GGTGACCCAAACGGACGTG 61.249 63.158 0.00 0.00 34.64 4.49
578 579 2.109593 GGTGACCCAAACGGACGT 59.890 61.111 0.00 0.00 34.64 4.34
590 591 1.541588 GAGCAACTCCAAATGGGTGAC 59.458 52.381 0.00 0.00 38.11 3.67
591 592 1.425066 AGAGCAACTCCAAATGGGTGA 59.575 47.619 0.00 0.00 38.11 4.02
592 593 1.915141 AGAGCAACTCCAAATGGGTG 58.085 50.000 0.00 0.00 38.11 4.61
593 594 3.806949 TTAGAGCAACTCCAAATGGGT 57.193 42.857 0.00 0.00 38.11 4.51
594 595 5.684704 TCTATTAGAGCAACTCCAAATGGG 58.315 41.667 0.00 0.00 35.41 4.00
595 596 6.293845 GCATCTATTAGAGCAACTCCAAATGG 60.294 42.308 0.00 0.00 0.00 3.16
596 597 6.261603 TGCATCTATTAGAGCAACTCCAAATG 59.738 38.462 12.49 0.00 33.48 2.32
597 598 6.359804 TGCATCTATTAGAGCAACTCCAAAT 58.640 36.000 12.49 0.00 33.48 2.32
598 599 5.744171 TGCATCTATTAGAGCAACTCCAAA 58.256 37.500 12.49 0.00 33.48 3.28
599 600 5.357742 TGCATCTATTAGAGCAACTCCAA 57.642 39.130 12.49 0.00 33.48 3.53
600 601 5.357742 TTGCATCTATTAGAGCAACTCCA 57.642 39.130 18.48 5.21 41.55 3.86
601 602 6.874288 ATTTGCATCTATTAGAGCAACTCC 57.126 37.500 20.50 0.49 45.53 3.85
602 603 8.286097 GGTTATTTGCATCTATTAGAGCAACTC 58.714 37.037 20.50 14.16 45.53 3.01
603 604 7.775093 TGGTTATTTGCATCTATTAGAGCAACT 59.225 33.333 20.50 18.54 45.53 3.16
604 605 7.930217 TGGTTATTTGCATCTATTAGAGCAAC 58.070 34.615 20.50 14.05 45.53 4.17
605 606 8.570488 CATGGTTATTTGCATCTATTAGAGCAA 58.430 33.333 18.48 18.48 44.36 3.91
606 607 7.720957 ACATGGTTATTTGCATCTATTAGAGCA 59.279 33.333 11.42 11.42 34.79 4.26
607 608 8.103948 ACATGGTTATTTGCATCTATTAGAGC 57.896 34.615 0.00 4.33 0.00 4.09
613 614 9.537192 CATTGAAACATGGTTATTTGCATCTAT 57.463 29.630 0.00 0.00 0.00 1.98
614 615 8.747471 TCATTGAAACATGGTTATTTGCATCTA 58.253 29.630 0.00 0.00 0.00 1.98
615 616 7.613585 TCATTGAAACATGGTTATTTGCATCT 58.386 30.769 0.00 0.00 0.00 2.90
616 617 7.830940 TCATTGAAACATGGTTATTTGCATC 57.169 32.000 0.00 0.00 0.00 3.91
617 618 8.795842 AATCATTGAAACATGGTTATTTGCAT 57.204 26.923 0.00 0.00 0.00 3.96
618 619 7.876582 TGAATCATTGAAACATGGTTATTTGCA 59.123 29.630 0.00 0.00 0.00 4.08
619 620 8.254178 TGAATCATTGAAACATGGTTATTTGC 57.746 30.769 0.00 0.00 0.00 3.68
626 627 9.775854 TGTAAATTTGAATCATTGAAACATGGT 57.224 25.926 0.00 0.00 0.00 3.55
637 638 9.374838 GCAGGATTTCTTGTAAATTTGAATCAT 57.625 29.630 0.00 0.00 0.00 2.45
638 639 7.541783 CGCAGGATTTCTTGTAAATTTGAATCA 59.458 33.333 0.00 0.00 0.00 2.57
639 640 7.754924 TCGCAGGATTTCTTGTAAATTTGAATC 59.245 33.333 0.00 1.88 0.00 2.52
640 641 7.601856 TCGCAGGATTTCTTGTAAATTTGAAT 58.398 30.769 0.00 0.00 0.00 2.57
641 642 6.976088 TCGCAGGATTTCTTGTAAATTTGAA 58.024 32.000 0.00 0.00 0.00 2.69
642 643 6.206634 ACTCGCAGGATTTCTTGTAAATTTGA 59.793 34.615 0.00 0.00 0.00 2.69
643 644 6.381801 ACTCGCAGGATTTCTTGTAAATTTG 58.618 36.000 0.00 0.00 0.00 2.32
644 645 6.575162 ACTCGCAGGATTTCTTGTAAATTT 57.425 33.333 0.00 0.00 0.00 1.82
645 646 7.681939 TTACTCGCAGGATTTCTTGTAAATT 57.318 32.000 0.00 0.00 0.00 1.82
646 647 7.552687 TGATTACTCGCAGGATTTCTTGTAAAT 59.447 33.333 0.00 0.00 0.00 1.40
647 648 6.876789 TGATTACTCGCAGGATTTCTTGTAAA 59.123 34.615 0.00 0.00 0.00 2.01
648 649 6.312918 GTGATTACTCGCAGGATTTCTTGTAA 59.687 38.462 0.00 0.00 31.95 2.41
649 650 5.810587 GTGATTACTCGCAGGATTTCTTGTA 59.189 40.000 0.00 0.00 31.95 2.41
650 651 4.631813 GTGATTACTCGCAGGATTTCTTGT 59.368 41.667 0.00 0.00 31.95 3.16
651 652 4.631377 TGTGATTACTCGCAGGATTTCTTG 59.369 41.667 0.00 0.00 36.99 3.02
652 653 4.832248 TGTGATTACTCGCAGGATTTCTT 58.168 39.130 0.00 0.00 36.99 2.52
653 654 4.471904 TGTGATTACTCGCAGGATTTCT 57.528 40.909 0.00 0.00 36.99 2.52
654 655 5.741388 AATGTGATTACTCGCAGGATTTC 57.259 39.130 2.65 0.00 44.65 2.17
655 656 6.515272 AAAATGTGATTACTCGCAGGATTT 57.485 33.333 2.65 1.99 44.65 2.17
656 657 6.515272 AAAAATGTGATTACTCGCAGGATT 57.485 33.333 2.65 0.00 44.65 3.01
678 679 7.015098 TGGTAGAAGAATGGCATTTGAGAAAAA 59.985 33.333 14.93 0.00 0.00 1.94
679 680 6.493115 TGGTAGAAGAATGGCATTTGAGAAAA 59.507 34.615 14.93 0.00 0.00 2.29
680 681 6.009589 TGGTAGAAGAATGGCATTTGAGAAA 58.990 36.000 14.93 0.00 0.00 2.52
681 682 5.569355 TGGTAGAAGAATGGCATTTGAGAA 58.431 37.500 14.93 0.00 0.00 2.87
682 683 5.178096 TGGTAGAAGAATGGCATTTGAGA 57.822 39.130 14.93 0.00 0.00 3.27
683 684 4.337555 CCTGGTAGAAGAATGGCATTTGAG 59.662 45.833 14.93 2.29 0.00 3.02
684 685 4.272489 CCTGGTAGAAGAATGGCATTTGA 58.728 43.478 14.93 0.00 0.00 2.69
685 686 3.382546 CCCTGGTAGAAGAATGGCATTTG 59.617 47.826 14.93 0.00 0.00 2.32
686 687 3.011708 ACCCTGGTAGAAGAATGGCATTT 59.988 43.478 14.93 0.00 0.00 2.32
687 688 2.582636 ACCCTGGTAGAAGAATGGCATT 59.417 45.455 13.54 13.54 0.00 3.56
688 689 2.208872 ACCCTGGTAGAAGAATGGCAT 58.791 47.619 0.00 0.00 0.00 4.40
689 690 1.668826 ACCCTGGTAGAAGAATGGCA 58.331 50.000 0.00 0.00 0.00 4.92
690 691 2.808906 AACCCTGGTAGAAGAATGGC 57.191 50.000 0.00 0.00 0.00 4.40
691 692 4.662278 TCAAAACCCTGGTAGAAGAATGG 58.338 43.478 0.00 0.00 0.00 3.16
692 693 6.648879 TTTCAAAACCCTGGTAGAAGAATG 57.351 37.500 0.00 0.00 0.00 2.67
693 694 7.855784 AATTTCAAAACCCTGGTAGAAGAAT 57.144 32.000 0.00 0.00 0.00 2.40
694 695 7.343316 TGAAATTTCAAAACCCTGGTAGAAGAA 59.657 33.333 18.45 0.00 33.55 2.52
695 696 6.836527 TGAAATTTCAAAACCCTGGTAGAAGA 59.163 34.615 18.45 0.00 33.55 2.87
696 697 7.049799 TGAAATTTCAAAACCCTGGTAGAAG 57.950 36.000 18.45 0.00 33.55 2.85
697 698 7.425224 TTGAAATTTCAAAACCCTGGTAGAA 57.575 32.000 27.22 3.54 43.62 2.10
742 743 0.245539 GCTACCACCGCTACAAGACA 59.754 55.000 0.00 0.00 0.00 3.41
743 744 0.245539 TGCTACCACCGCTACAAGAC 59.754 55.000 0.00 0.00 0.00 3.01
744 745 0.245539 GTGCTACCACCGCTACAAGA 59.754 55.000 0.00 0.00 35.92 3.02
745 746 0.037697 TGTGCTACCACCGCTACAAG 60.038 55.000 0.00 0.00 41.35 3.16
746 747 0.320073 GTGTGCTACCACCGCTACAA 60.320 55.000 0.00 0.00 41.35 2.41
747 748 1.290955 GTGTGCTACCACCGCTACA 59.709 57.895 0.00 0.00 41.35 2.74
748 749 1.804326 CGTGTGCTACCACCGCTAC 60.804 63.158 0.00 0.00 41.35 3.58
749 750 1.972752 TCGTGTGCTACCACCGCTA 60.973 57.895 0.00 0.00 41.35 4.26
753 771 2.047560 GGGTCGTGTGCTACCACC 60.048 66.667 0.00 1.05 41.35 4.61
755 773 3.687102 CGGGGTCGTGTGCTACCA 61.687 66.667 0.00 0.00 37.51 3.25
764 782 4.653888 CCTTTTGGCCGGGGTCGT 62.654 66.667 2.18 0.00 33.95 4.34
819 853 1.219124 GGCGATGAGACTCTGCCAA 59.781 57.895 21.52 0.00 45.06 4.52
828 862 4.623814 CCTTTGCAGGCGATGAGA 57.376 55.556 0.00 0.00 31.53 3.27
845 879 1.696832 GGTCACGCGAATCCTTCTGC 61.697 60.000 15.93 0.00 0.00 4.26
861 895 3.249961 GGGGATCGGGATGGGGTC 61.250 72.222 0.00 0.00 0.00 4.46
862 896 3.791076 AGGGGATCGGGATGGGGT 61.791 66.667 0.00 0.00 0.00 4.95
875 913 1.772156 GGAGGGAATGGAGGAGGGG 60.772 68.421 0.00 0.00 0.00 4.79
897 935 7.227049 AGAGAAAGTTTGGAGTTTTGAACAA 57.773 32.000 0.00 0.00 0.00 2.83
1027 1113 2.415010 CATGAGGACGCTCCGGAG 59.585 66.667 27.83 27.83 42.75 4.63
1030 1116 2.584418 CTGCATGAGGACGCTCCG 60.584 66.667 0.00 0.00 42.75 4.63
1505 1626 1.305297 AGGTCGATGGCTGTCCTGA 60.305 57.895 0.00 0.00 0.00 3.86
1611 1738 3.626680 CTTGCGGTCGAGGAAGCGA 62.627 63.158 0.00 0.00 42.48 4.93
1694 1821 2.489722 GGACAGAAGATGAAGGTTTGGC 59.510 50.000 0.00 0.00 0.00 4.52
1705 1834 4.026744 TGATCGAAGGAAGGACAGAAGAT 58.973 43.478 0.00 0.00 0.00 2.40
1723 1876 6.939132 ATGAATTGGACAGTCAGATTGATC 57.061 37.500 2.17 0.00 0.00 2.92
1747 1905 3.657398 ATTGGGCAGTCAGATTGATGA 57.343 42.857 0.00 0.00 0.00 2.92
1762 1920 2.827322 TCCTGCAACAAGATGAATTGGG 59.173 45.455 0.00 0.00 34.36 4.12
1796 1954 3.008375 AGTGAGCTGCCTAATCTGTTGAA 59.992 43.478 0.00 0.00 0.00 2.69
1894 2085 8.174085 AGTAGCTACAGATCATCCTAGGTAAAT 58.826 37.037 25.28 0.32 0.00 1.40
1969 5065 6.582636 AGCACAAATAGTAGTAGCATAGCAA 58.417 36.000 0.00 0.00 0.00 3.91
1983 5088 8.044060 TCCAGAAAGTTATTGAGCACAAATAG 57.956 34.615 0.00 0.00 39.54 1.73
1984 5089 7.994425 TCCAGAAAGTTATTGAGCACAAATA 57.006 32.000 0.00 0.00 39.54 1.40
1985 5090 6.899393 TCCAGAAAGTTATTGAGCACAAAT 57.101 33.333 0.00 0.00 39.54 2.32
1986 5091 6.294675 CCATCCAGAAAGTTATTGAGCACAAA 60.295 38.462 0.00 0.00 39.54 2.83
1987 5092 5.183713 CCATCCAGAAAGTTATTGAGCACAA 59.816 40.000 0.00 0.00 40.42 3.33
1998 5103 1.915141 CCACAGCCATCCAGAAAGTT 58.085 50.000 0.00 0.00 0.00 2.66
2000 5105 0.323178 AGCCACAGCCATCCAGAAAG 60.323 55.000 0.00 0.00 41.25 2.62
2045 5150 9.453572 CGATATTACACTACTACATTACCCCTA 57.546 37.037 0.00 0.00 0.00 3.53
2100 5211 5.163663 TGCTATCCCAAATTTGACATTCGAC 60.164 40.000 19.86 2.98 0.00 4.20
2146 5261 3.314357 CGATGCAAATGACATCACAGGAT 59.686 43.478 14.01 0.00 43.36 3.24
2148 5263 2.679336 TCGATGCAAATGACATCACAGG 59.321 45.455 14.01 3.33 43.36 4.00
2164 5279 5.798132 TCAATTTCCATCCTAGGATCGATG 58.202 41.667 22.02 15.25 37.56 3.84
2181 5296 9.683069 GGAGAATGCAATCGTTAATATCAATTT 57.317 29.630 0.00 0.00 0.00 1.82
2205 5320 4.892934 ACCTAGAACAAAATGCAAACTGGA 59.107 37.500 0.00 0.00 0.00 3.86
2214 5329 5.390885 CGACCATCACACCTAGAACAAAATG 60.391 44.000 0.00 0.00 0.00 2.32
2227 5342 2.151202 ACCACAAATCGACCATCACAC 58.849 47.619 0.00 0.00 0.00 3.82
2296 5415 4.937015 GCCTTTGACAATTAATGGTGCATT 59.063 37.500 0.00 0.00 37.80 3.56
2303 5422 9.139174 AGTTAAATTCGCCTTTGACAATTAATG 57.861 29.630 0.00 0.00 29.62 1.90
2310 5429 6.072893 GGAACTAGTTAAATTCGCCTTTGACA 60.073 38.462 8.42 0.00 29.62 3.58
2369 5488 4.081476 GGCAGCTGGAAAATTACCAATCTT 60.081 41.667 17.12 0.00 36.95 2.40
2375 5494 2.171003 ACTGGCAGCTGGAAAATTACC 58.829 47.619 17.12 5.80 0.00 2.85
2445 5571 5.045213 TGTCCCACCAATAATATGCCGATAT 60.045 40.000 0.00 0.00 0.00 1.63
2450 5581 3.957497 TGTTGTCCCACCAATAATATGCC 59.043 43.478 0.00 0.00 0.00 4.40
2455 5586 7.969690 TTCAATATGTTGTCCCACCAATAAT 57.030 32.000 1.86 0.00 36.69 1.28
2461 5604 5.913137 TCAATTCAATATGTTGTCCCACC 57.087 39.130 1.86 0.00 36.69 4.61
2549 5694 4.660789 AGAATTGGAGCAATTGGTATGC 57.339 40.909 10.70 0.00 43.05 3.14
2553 5698 4.591321 TCCTAGAATTGGAGCAATTGGT 57.409 40.909 10.50 10.50 43.05 3.67
2554 5699 5.839621 CAATCCTAGAATTGGAGCAATTGG 58.160 41.667 7.72 0.00 43.05 3.16
2675 5821 9.468532 CTATCGATCAACAGTCTATCATTTCAA 57.531 33.333 0.00 0.00 0.00 2.69
2685 5831 4.017126 TGGTGACTATCGATCAACAGTCT 58.983 43.478 20.99 0.00 38.87 3.24
2686 5832 4.371855 TGGTGACTATCGATCAACAGTC 57.628 45.455 15.98 15.98 38.87 3.51
2691 5837 6.037786 AGTTTCTTGGTGACTATCGATCAA 57.962 37.500 0.00 0.00 0.00 2.57
2721 5867 1.496060 ACGGAGGGAGTATGATGCAA 58.504 50.000 0.00 0.00 0.00 4.08
2728 5874 7.068470 GCTTATATTTAGCTACGGAGGGAGTAT 59.932 40.741 0.00 0.00 35.74 2.12
2764 5910 8.900781 GCTCGGTATGTAGTCTATATTGGAATA 58.099 37.037 0.00 0.00 0.00 1.75
2765 5911 7.616150 AGCTCGGTATGTAGTCTATATTGGAAT 59.384 37.037 0.00 0.00 0.00 3.01
2766 5912 6.946583 AGCTCGGTATGTAGTCTATATTGGAA 59.053 38.462 0.00 0.00 0.00 3.53
2767 5913 6.482524 AGCTCGGTATGTAGTCTATATTGGA 58.517 40.000 0.00 0.00 0.00 3.53
2768 5914 6.761099 AGCTCGGTATGTAGTCTATATTGG 57.239 41.667 0.00 0.00 0.00 3.16
2771 5917 9.682465 TCATTTAGCTCGGTATGTAGTCTATAT 57.318 33.333 0.00 0.00 0.00 0.86
2772 5918 9.511272 TTCATTTAGCTCGGTATGTAGTCTATA 57.489 33.333 0.00 0.00 0.00 1.31
2773 5919 7.997773 TCATTTAGCTCGGTATGTAGTCTAT 57.002 36.000 0.00 0.00 0.00 1.98
2774 5920 7.812690 TTCATTTAGCTCGGTATGTAGTCTA 57.187 36.000 0.00 0.00 0.00 2.59
2775 5921 6.710597 TTCATTTAGCTCGGTATGTAGTCT 57.289 37.500 0.00 0.00 0.00 3.24
2776 5922 7.145985 TCATTCATTTAGCTCGGTATGTAGTC 58.854 38.462 0.00 0.00 0.00 2.59
2777 5923 7.050970 TCATTCATTTAGCTCGGTATGTAGT 57.949 36.000 0.00 0.00 0.00 2.73
2778 5924 7.946655 TTCATTCATTTAGCTCGGTATGTAG 57.053 36.000 0.00 0.00 0.00 2.74
2779 5925 7.931407 ACATTCATTCATTTAGCTCGGTATGTA 59.069 33.333 0.00 0.00 0.00 2.29
2780 5926 6.767902 ACATTCATTCATTTAGCTCGGTATGT 59.232 34.615 0.00 0.00 0.00 2.29
2781 5927 7.194607 ACATTCATTCATTTAGCTCGGTATG 57.805 36.000 0.00 0.00 0.00 2.39
2782 5928 7.931407 TGTACATTCATTCATTTAGCTCGGTAT 59.069 33.333 0.00 0.00 0.00 2.73
2783 5929 7.269316 TGTACATTCATTCATTTAGCTCGGTA 58.731 34.615 0.00 0.00 0.00 4.02
2784 5930 6.112734 TGTACATTCATTCATTTAGCTCGGT 58.887 36.000 0.00 0.00 0.00 4.69
2785 5931 6.603237 TGTACATTCATTCATTTAGCTCGG 57.397 37.500 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.