Multiple sequence alignment - TraesCS7B01G020900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G020900 chr7B 100.000 2893 0 0 1 2893 18507211 18504319 0.000000e+00 5343.0
1 TraesCS7B01G020900 chr7B 88.034 468 22 15 767 1229 19141412 19140974 9.180000e-145 523.0
2 TraesCS7B01G020900 chr7B 86.957 460 20 17 1281 1722 19140887 19140450 5.610000e-132 481.0
3 TraesCS7B01G020900 chr7B 98.315 178 3 0 2478 2655 727383611 727383788 2.160000e-81 313.0
4 TraesCS7B01G020900 chr7B 96.296 189 7 0 996 1184 18218025 18217837 7.780000e-81 311.0
5 TraesCS7B01G020900 chr7B 94.359 195 11 0 2470 2664 718968611 718968417 1.690000e-77 300.0
6 TraesCS7B01G020900 chr7A 84.173 973 70 38 1249 2176 78574882 78573949 0.000000e+00 867.0
7 TraesCS7B01G020900 chr7A 85.031 481 38 15 79 535 78576161 78575691 2.630000e-125 459.0
8 TraesCS7B01G020900 chr7A 88.742 302 23 8 940 1238 78575423 78575130 2.740000e-95 359.0
9 TraesCS7B01G020900 chr7A 97.326 187 5 0 998 1184 78520560 78520374 4.650000e-83 318.0
10 TraesCS7B01G020900 chr7A 88.845 251 13 7 2225 2460 78573951 78573701 7.840000e-76 294.0
11 TraesCS7B01G020900 chr7A 87.097 186 8 7 645 818 78575636 78575455 2.270000e-46 196.0
12 TraesCS7B01G020900 chr7D 81.389 1123 61 56 767 1804 74965131 74964072 0.000000e+00 780.0
13 TraesCS7B01G020900 chr7D 89.011 364 37 3 2123 2483 74963666 74963303 5.690000e-122 448.0
14 TraesCS7B01G020900 chr7D 90.514 253 11 8 953 1199 74607833 74607588 3.600000e-84 322.0
15 TraesCS7B01G020900 chr7D 86.250 240 24 4 2656 2893 74963312 74963080 4.790000e-63 252.0
16 TraesCS7B01G020900 chr7D 81.614 223 23 9 1889 2110 74963954 74963749 4.960000e-38 169.0
17 TraesCS7B01G020900 chr7D 83.784 148 14 7 1702 1847 74606966 74606827 6.500000e-27 132.0
18 TraesCS7B01G020900 chr7D 100.000 44 0 0 460 503 74965393 74965350 6.640000e-12 82.4
19 TraesCS7B01G020900 chr4B 96.791 187 6 0 2478 2664 667396896 667396710 2.160000e-81 313.0
20 TraesCS7B01G020900 chr3B 96.316 190 5 2 2475 2663 794325078 794324890 7.780000e-81 311.0
21 TraesCS7B01G020900 chr5B 95.855 193 5 3 2473 2664 346616348 346616158 2.800000e-80 309.0
22 TraesCS7B01G020900 chr5B 95.263 190 7 2 2475 2663 509485252 509485064 1.690000e-77 300.0
23 TraesCS7B01G020900 chr5B 88.889 180 17 3 996 1174 574061212 574061035 4.850000e-53 219.0
24 TraesCS7B01G020900 chr6B 94.792 192 8 2 2474 2664 636490829 636490639 6.060000e-77 298.0
25 TraesCS7B01G020900 chr2B 94.359 195 7 4 2471 2663 36413926 36413734 2.180000e-76 296.0
26 TraesCS7B01G020900 chr2B 94.359 195 8 3 2470 2663 763446641 763446833 2.180000e-76 296.0
27 TraesCS7B01G020900 chr5A 88.298 188 19 3 996 1182 588023763 588023578 3.750000e-54 222.0
28 TraesCS7B01G020900 chr5D 87.766 188 20 3 996 1182 467424632 467424447 1.750000e-52 217.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G020900 chr7B 18504319 18507211 2892 True 5343.00 5343 100.0000 1 2893 1 chr7B.!!$R2 2892
1 TraesCS7B01G020900 chr7B 19140450 19141412 962 True 502.00 523 87.4955 767 1722 2 chr7B.!!$R4 955
2 TraesCS7B01G020900 chr7A 78573701 78576161 2460 True 435.00 867 86.7776 79 2460 5 chr7A.!!$R2 2381
3 TraesCS7B01G020900 chr7D 74963080 74965393 2313 True 346.28 780 87.6528 460 2893 5 chr7D.!!$R2 2433
4 TraesCS7B01G020900 chr7D 74606827 74607833 1006 True 227.00 322 87.1490 953 1847 2 chr7D.!!$R1 894

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
390 405 0.033504 TCTTTTCGAGAGCGTGGCTT 59.966 50.0 0.0 0.0 39.88 4.35 F
393 408 0.315886 TTTCGAGAGCGTGGCTTGTA 59.684 50.0 0.0 0.0 39.88 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1852 2474 0.183971 CTAAGGCGGGGAGAGAGAGA 59.816 60.0 0.00 0.0 0.0 3.10 R
1959 2631 0.326264 GGAGAACATGTCACTGGCCT 59.674 55.0 3.32 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.963878 GGTCTGACCGGCATGAAT 57.036 55.556 11.71 0.00 0.00 2.57
19 20 2.397751 GGTCTGACCGGCATGAATG 58.602 57.895 11.71 0.00 0.00 2.67
20 21 0.392998 GGTCTGACCGGCATGAATGT 60.393 55.000 11.71 0.00 0.00 2.71
21 22 0.729116 GTCTGACCGGCATGAATGTG 59.271 55.000 0.00 0.00 0.00 3.21
22 23 0.392863 TCTGACCGGCATGAATGTGG 60.393 55.000 0.00 3.16 0.00 4.17
23 24 0.677731 CTGACCGGCATGAATGTGGT 60.678 55.000 0.00 8.50 39.97 4.16
24 25 0.615850 TGACCGGCATGAATGTGGTA 59.384 50.000 0.00 0.00 38.29 3.25
25 26 1.299541 GACCGGCATGAATGTGGTAG 58.700 55.000 0.00 0.00 38.29 3.18
26 27 0.107214 ACCGGCATGAATGTGGTAGG 60.107 55.000 0.00 0.82 37.06 3.18
27 28 0.107214 CCGGCATGAATGTGGTAGGT 60.107 55.000 0.00 0.00 0.00 3.08
28 29 1.016627 CGGCATGAATGTGGTAGGTG 58.983 55.000 0.00 0.00 0.00 4.00
29 30 1.392589 GGCATGAATGTGGTAGGTGG 58.607 55.000 0.00 0.00 0.00 4.61
30 31 0.740737 GCATGAATGTGGTAGGTGGC 59.259 55.000 0.00 0.00 0.00 5.01
31 32 1.392589 CATGAATGTGGTAGGTGGCC 58.607 55.000 0.00 0.00 0.00 5.36
32 33 0.107214 ATGAATGTGGTAGGTGGCCG 60.107 55.000 0.00 0.00 0.00 6.13
33 34 1.298667 GAATGTGGTAGGTGGCCGT 59.701 57.895 0.00 0.00 0.00 5.68
34 35 0.743345 GAATGTGGTAGGTGGCCGTC 60.743 60.000 0.00 0.00 0.00 4.79
35 36 2.515996 AATGTGGTAGGTGGCCGTCG 62.516 60.000 0.00 0.00 0.00 5.12
36 37 3.376078 GTGGTAGGTGGCCGTCGA 61.376 66.667 0.00 0.00 0.00 4.20
37 38 2.363276 TGGTAGGTGGCCGTCGAT 60.363 61.111 0.00 0.00 0.00 3.59
38 39 2.416260 GGTAGGTGGCCGTCGATC 59.584 66.667 0.00 0.00 0.00 3.69
39 40 2.025727 GTAGGTGGCCGTCGATCG 59.974 66.667 9.36 9.36 39.52 3.69
40 41 3.896133 TAGGTGGCCGTCGATCGC 61.896 66.667 11.09 4.79 38.35 4.58
42 43 4.891727 GGTGGCCGTCGATCGCAT 62.892 66.667 11.09 0.00 38.35 4.73
43 44 3.330853 GTGGCCGTCGATCGCATC 61.331 66.667 11.09 2.52 38.35 3.91
44 45 3.527427 TGGCCGTCGATCGCATCT 61.527 61.111 11.09 0.00 38.35 2.90
45 46 3.032609 GGCCGTCGATCGCATCTG 61.033 66.667 11.09 1.39 38.35 2.90
46 47 3.696426 GCCGTCGATCGCATCTGC 61.696 66.667 11.09 7.71 38.35 4.26
47 48 2.026734 CCGTCGATCGCATCTGCT 59.973 61.111 11.09 0.00 39.32 4.24
48 49 2.013483 CCGTCGATCGCATCTGCTC 61.013 63.158 11.09 0.00 39.32 4.26
49 50 1.009108 CGTCGATCGCATCTGCTCT 60.009 57.895 11.09 0.00 39.32 4.09
50 51 0.235926 CGTCGATCGCATCTGCTCTA 59.764 55.000 11.09 0.00 39.32 2.43
51 52 1.334149 CGTCGATCGCATCTGCTCTAA 60.334 52.381 11.09 0.00 39.32 2.10
52 53 2.732366 GTCGATCGCATCTGCTCTAAA 58.268 47.619 11.09 0.00 39.32 1.85
53 54 3.312828 GTCGATCGCATCTGCTCTAAAT 58.687 45.455 11.09 0.00 39.32 1.40
54 55 3.120947 GTCGATCGCATCTGCTCTAAATG 59.879 47.826 11.09 0.00 39.32 2.32
55 56 2.411069 CGATCGCATCTGCTCTAAATGG 59.589 50.000 0.26 0.00 39.32 3.16
56 57 1.586422 TCGCATCTGCTCTAAATGGC 58.414 50.000 0.09 0.00 39.32 4.40
57 58 1.134431 TCGCATCTGCTCTAAATGGCA 60.134 47.619 0.09 0.00 39.32 4.92
58 59 1.003116 CGCATCTGCTCTAAATGGCAC 60.003 52.381 0.00 0.00 39.32 5.01
59 60 2.295885 GCATCTGCTCTAAATGGCACT 58.704 47.619 0.00 0.00 38.21 4.40
60 61 2.033049 GCATCTGCTCTAAATGGCACTG 59.967 50.000 0.00 0.00 38.21 3.66
61 62 3.538591 CATCTGCTCTAAATGGCACTGA 58.461 45.455 0.00 0.00 34.57 3.41
62 63 3.701205 TCTGCTCTAAATGGCACTGAA 57.299 42.857 0.00 0.00 34.57 3.02
63 64 4.226427 TCTGCTCTAAATGGCACTGAAT 57.774 40.909 0.00 0.00 34.57 2.57
64 65 3.943381 TCTGCTCTAAATGGCACTGAATG 59.057 43.478 0.00 0.00 34.57 2.67
72 73 3.478394 GCACTGAATGCGCGACGA 61.478 61.111 12.10 0.00 46.55 4.20
73 74 2.802667 GCACTGAATGCGCGACGAT 61.803 57.895 12.10 0.00 46.55 3.73
74 75 1.012998 CACTGAATGCGCGACGATG 60.013 57.895 12.10 0.00 0.00 3.84
75 76 2.053638 CTGAATGCGCGACGATGC 60.054 61.111 12.10 1.69 0.00 3.91
76 77 2.801624 CTGAATGCGCGACGATGCA 61.802 57.895 12.10 15.92 46.51 3.96
91 92 1.732259 GATGCATCTGGAACGAAACGT 59.268 47.619 19.70 0.00 43.97 3.99
96 97 2.202905 TGGAACGAAACGTGCGGT 60.203 55.556 14.39 8.55 39.99 5.68
104 105 0.442699 GAAACGTGCGGTGAGGATTC 59.557 55.000 0.00 0.00 0.00 2.52
108 109 1.596934 GTGCGGTGAGGATTCTGGA 59.403 57.895 0.00 0.00 0.00 3.86
115 116 1.141858 GTGAGGATTCTGGATGGGACC 59.858 57.143 0.00 0.00 0.00 4.46
152 162 0.522076 CGTGGCGGACGTCTACTAAC 60.522 60.000 16.46 7.13 43.50 2.34
164 174 3.431486 CGTCTACTAACCTCCTACCGACT 60.431 52.174 0.00 0.00 0.00 4.18
165 175 4.522114 GTCTACTAACCTCCTACCGACTT 58.478 47.826 0.00 0.00 0.00 3.01
166 176 4.335037 GTCTACTAACCTCCTACCGACTTG 59.665 50.000 0.00 0.00 0.00 3.16
198 208 2.373540 TGGATTTCGAACGTCCGAAT 57.626 45.000 11.27 0.71 46.21 3.34
199 209 1.996898 TGGATTTCGAACGTCCGAATG 59.003 47.619 11.27 0.00 46.21 2.67
200 210 1.326548 GGATTTCGAACGTCCGAATGG 59.673 52.381 11.27 0.00 46.21 3.16
201 211 1.326548 GATTTCGAACGTCCGAATGGG 59.673 52.381 11.27 0.00 46.21 4.00
202 212 0.033781 TTTCGAACGTCCGAATGGGT 59.966 50.000 11.27 0.00 46.21 4.51
203 213 0.388907 TTCGAACGTCCGAATGGGTC 60.389 55.000 5.20 0.00 42.74 4.46
216 226 0.323629 ATGGGTCGATGGACGTTTGT 59.676 50.000 1.47 0.00 44.39 2.83
219 229 0.110373 GGTCGATGGACGTTTGTTGC 60.110 55.000 1.47 0.00 44.39 4.17
224 234 1.098712 ATGGACGTTTGTTGCACGGT 61.099 50.000 0.00 0.00 42.14 4.83
237 247 1.707239 GCACGGTGTTGGACGACAAA 61.707 55.000 10.24 0.00 41.58 2.83
250 260 0.584876 CGACAAAAGGTGTTCGGACC 59.415 55.000 0.00 0.00 41.96 4.46
277 287 1.219522 CCGGACGTTGAGAAGCGTTT 61.220 55.000 0.00 0.00 41.70 3.60
278 288 0.580104 CGGACGTTGAGAAGCGTTTT 59.420 50.000 0.00 0.00 41.70 2.43
312 322 2.435059 GACCGGAGCTGCCTTCAC 60.435 66.667 9.46 0.00 0.00 3.18
322 332 1.131883 GCTGCCTTCACATGACATGAC 59.868 52.381 22.19 0.00 0.00 3.06
323 333 1.741706 CTGCCTTCACATGACATGACC 59.258 52.381 22.19 4.14 0.00 4.02
325 335 2.161855 GCCTTCACATGACATGACCAA 58.838 47.619 22.19 9.71 0.00 3.67
326 336 2.557924 GCCTTCACATGACATGACCAAA 59.442 45.455 22.19 8.85 0.00 3.28
354 369 2.034842 CGAGCGCTAGTTTATTTGTCCG 60.035 50.000 11.50 0.00 0.00 4.79
390 405 0.033504 TCTTTTCGAGAGCGTGGCTT 59.966 50.000 0.00 0.00 39.88 4.35
393 408 0.315886 TTTCGAGAGCGTGGCTTGTA 59.684 50.000 0.00 0.00 39.88 2.41
400 415 0.321671 AGCGTGGCTTGTATGAGTGT 59.678 50.000 0.00 0.00 33.89 3.55
401 416 1.156736 GCGTGGCTTGTATGAGTGTT 58.843 50.000 0.00 0.00 0.00 3.32
402 417 1.135972 GCGTGGCTTGTATGAGTGTTG 60.136 52.381 0.00 0.00 0.00 3.33
408 427 3.347216 GCTTGTATGAGTGTTGGACCAT 58.653 45.455 0.00 0.00 0.00 3.55
435 454 3.578456 GTGGCACGCACAGCTATT 58.422 55.556 0.00 0.00 39.55 1.73
442 461 0.747255 ACGCACAGCTATTCCGATCT 59.253 50.000 0.00 0.00 0.00 2.75
443 462 1.137086 ACGCACAGCTATTCCGATCTT 59.863 47.619 0.00 0.00 0.00 2.40
507 532 2.084681 CGACACGTTCGTACCAGGC 61.085 63.158 10.63 0.00 43.24 4.85
537 562 3.151022 CTCCAGCCCTCCTCCGTC 61.151 72.222 0.00 0.00 0.00 4.79
538 563 4.779733 TCCAGCCCTCCTCCGTCC 62.780 72.222 0.00 0.00 0.00 4.79
609 639 0.540830 TAGCTAGCTAGGGCCTGCTC 60.541 60.000 26.57 16.83 42.97 4.26
620 650 3.062466 CCTGCTCGGAGTGACGGA 61.062 66.667 6.90 0.00 33.16 4.69
622 652 1.226802 CTGCTCGGAGTGACGGATG 60.227 63.158 6.90 0.00 0.00 3.51
623 653 2.105128 GCTCGGAGTGACGGATGG 59.895 66.667 6.90 0.00 0.00 3.51
624 654 2.808315 CTCGGAGTGACGGATGGG 59.192 66.667 0.00 0.00 0.00 4.00
625 655 2.036731 TCGGAGTGACGGATGGGT 59.963 61.111 0.00 0.00 0.00 4.51
626 656 0.750546 CTCGGAGTGACGGATGGGTA 60.751 60.000 0.00 0.00 0.00 3.69
627 657 1.033746 TCGGAGTGACGGATGGGTAC 61.034 60.000 0.00 0.00 0.00 3.34
663 693 5.009631 GCAATACCATACCATTGGAGCATA 58.990 41.667 10.37 0.00 39.25 3.14
773 811 2.291043 GGACGGCCAAAGAGGGAGA 61.291 63.158 0.00 0.00 38.09 3.71
778 816 1.762957 CGGCCAAAGAGGGAGAAGATA 59.237 52.381 2.24 0.00 38.09 1.98
779 817 2.483889 CGGCCAAAGAGGGAGAAGATAC 60.484 54.545 2.24 0.00 38.09 2.24
796 864 5.854010 AGATACCTTCAAGCGAGATACAA 57.146 39.130 0.00 0.00 0.00 2.41
814 882 8.393959 AGATACAAAGGAAAGGGAAAGATAGA 57.606 34.615 0.00 0.00 0.00 1.98
902 994 1.525175 ACTCCTCCTCCTCTATCCGT 58.475 55.000 0.00 0.00 0.00 4.69
903 995 1.422402 ACTCCTCCTCCTCTATCCGTC 59.578 57.143 0.00 0.00 0.00 4.79
904 996 0.772384 TCCTCCTCCTCTATCCGTCC 59.228 60.000 0.00 0.00 0.00 4.79
905 997 0.606944 CCTCCTCCTCTATCCGTCCG 60.607 65.000 0.00 0.00 0.00 4.79
906 998 0.397187 CTCCTCCTCTATCCGTCCGA 59.603 60.000 0.00 0.00 0.00 4.55
912 1004 2.050895 CTATCCGTCCGAGCAGCG 60.051 66.667 0.00 0.00 40.47 5.18
940 1032 2.225267 GGAGAAGGAGAGGAGGATAGGG 60.225 59.091 0.00 0.00 0.00 3.53
948 1040 1.790157 GAGGAGGATAGGGGAGAAGGA 59.210 57.143 0.00 0.00 0.00 3.36
955 1047 0.642710 TAGGGGAGAAGGAGAAGGGG 59.357 60.000 0.00 0.00 0.00 4.79
956 1048 1.162951 AGGGGAGAAGGAGAAGGGGA 61.163 60.000 0.00 0.00 0.00 4.81
961 1053 1.834896 GAGAAGGAGAAGGGGAAGGAC 59.165 57.143 0.00 0.00 0.00 3.85
1042 1138 0.721718 GAAGCGGATCGACAACAAGG 59.278 55.000 0.00 0.00 0.00 3.61
1107 1203 1.516603 GAAGGCGTACGAGCTGTCC 60.517 63.158 21.65 9.47 37.29 4.02
1184 1280 3.898482 TCGAGTTCTCCACATCCTCATA 58.102 45.455 0.00 0.00 0.00 2.15
1185 1281 4.474394 TCGAGTTCTCCACATCCTCATAT 58.526 43.478 0.00 0.00 0.00 1.78
1186 1282 5.631119 TCGAGTTCTCCACATCCTCATATA 58.369 41.667 0.00 0.00 0.00 0.86
1187 1283 6.249192 TCGAGTTCTCCACATCCTCATATAT 58.751 40.000 0.00 0.00 0.00 0.86
1229 1334 2.359531 TCCGCTCCGATTTGTTTGTTTT 59.640 40.909 0.00 0.00 0.00 2.43
1231 1336 4.216687 TCCGCTCCGATTTGTTTGTTTTAT 59.783 37.500 0.00 0.00 0.00 1.40
1234 1339 4.862574 GCTCCGATTTGTTTGTTTTATCCC 59.137 41.667 0.00 0.00 0.00 3.85
1238 1343 6.926272 TCCGATTTGTTTGTTTTATCCCAAAG 59.074 34.615 0.00 0.00 31.65 2.77
1239 1344 6.926272 CCGATTTGTTTGTTTTATCCCAAAGA 59.074 34.615 0.00 0.00 31.65 2.52
1240 1345 7.116233 CCGATTTGTTTGTTTTATCCCAAAGAG 59.884 37.037 0.00 0.00 31.65 2.85
1252 1376 1.160137 CCAAAGAGTTCGCTCCAAGG 58.840 55.000 0.00 0.00 45.16 3.61
1325 1696 3.888934 TCATCTTCTTTTGCTGTTTCGC 58.111 40.909 0.00 0.00 0.00 4.70
1359 1752 3.751621 CTGTTGCGTCTTTCCAATCATC 58.248 45.455 0.00 0.00 0.00 2.92
1360 1753 2.487762 TGTTGCGTCTTTCCAATCATCC 59.512 45.455 0.00 0.00 0.00 3.51
1361 1754 2.487762 GTTGCGTCTTTCCAATCATCCA 59.512 45.455 0.00 0.00 0.00 3.41
1362 1755 3.003394 TGCGTCTTTCCAATCATCCAT 57.997 42.857 0.00 0.00 0.00 3.41
1363 1756 2.945008 TGCGTCTTTCCAATCATCCATC 59.055 45.455 0.00 0.00 0.00 3.51
1364 1757 2.291741 GCGTCTTTCCAATCATCCATCC 59.708 50.000 0.00 0.00 0.00 3.51
1365 1758 3.544684 CGTCTTTCCAATCATCCATCCA 58.455 45.455 0.00 0.00 0.00 3.41
1366 1759 4.139786 CGTCTTTCCAATCATCCATCCAT 58.860 43.478 0.00 0.00 0.00 3.41
1367 1760 5.308014 CGTCTTTCCAATCATCCATCCATA 58.692 41.667 0.00 0.00 0.00 2.74
1368 1761 5.942236 CGTCTTTCCAATCATCCATCCATAT 59.058 40.000 0.00 0.00 0.00 1.78
1369 1762 6.093219 CGTCTTTCCAATCATCCATCCATATC 59.907 42.308 0.00 0.00 0.00 1.63
1370 1763 6.944290 GTCTTTCCAATCATCCATCCATATCA 59.056 38.462 0.00 0.00 0.00 2.15
1371 1764 7.449395 GTCTTTCCAATCATCCATCCATATCAA 59.551 37.037 0.00 0.00 0.00 2.57
1372 1765 7.668469 TCTTTCCAATCATCCATCCATATCAAG 59.332 37.037 0.00 0.00 0.00 3.02
1373 1766 6.458630 TCCAATCATCCATCCATATCAAGT 57.541 37.500 0.00 0.00 0.00 3.16
1374 1767 6.855667 TCCAATCATCCATCCATATCAAGTT 58.144 36.000 0.00 0.00 0.00 2.66
1375 1768 7.987820 TCCAATCATCCATCCATATCAAGTTA 58.012 34.615 0.00 0.00 0.00 2.24
1376 1769 8.617491 TCCAATCATCCATCCATATCAAGTTAT 58.383 33.333 0.00 0.00 0.00 1.89
1377 1770 8.900781 CCAATCATCCATCCATATCAAGTTATC 58.099 37.037 0.00 0.00 0.00 1.75
1378 1771 9.457436 CAATCATCCATCCATATCAAGTTATCA 57.543 33.333 0.00 0.00 0.00 2.15
1462 1912 6.265422 TCCAGATCGACAAATCAGAGCTATAA 59.735 38.462 0.00 0.00 0.00 0.98
1491 2029 3.238108 TCAGAGCTACTACTTGCTTGC 57.762 47.619 0.00 0.00 39.91 4.01
1492 2030 2.093973 TCAGAGCTACTACTTGCTTGCC 60.094 50.000 0.00 0.00 39.91 4.52
1493 2031 1.902508 AGAGCTACTACTTGCTTGCCA 59.097 47.619 0.00 0.00 39.91 4.92
1494 2032 2.003301 GAGCTACTACTTGCTTGCCAC 58.997 52.381 0.00 0.00 39.91 5.01
1632 2237 7.907563 GCTCAGAAAACAAATCAGCTAGTTATC 59.092 37.037 0.00 0.00 0.00 1.75
1639 2244 6.352516 ACAAATCAGCTAGTTATCCTCTTGG 58.647 40.000 0.00 0.00 0.00 3.61
1743 2359 5.039645 CTCCCTATCCCTCTCTATCTCTCT 58.960 50.000 0.00 0.00 0.00 3.10
1764 2383 1.067846 GGTGTGTGTATCGCTCACTGA 60.068 52.381 12.70 0.00 40.94 3.41
1834 2456 4.851639 ATTCTACTGTTCCATTGAGCCT 57.148 40.909 0.00 0.00 0.00 4.58
1850 2472 1.616159 GCCTTCGGCTCTCTCTATCT 58.384 55.000 0.00 0.00 46.69 1.98
1852 2474 2.814097 GCCTTCGGCTCTCTCTATCTCT 60.814 54.545 0.00 0.00 46.69 3.10
1853 2475 3.074412 CCTTCGGCTCTCTCTATCTCTC 58.926 54.545 0.00 0.00 0.00 3.20
1857 2480 3.258372 TCGGCTCTCTCTATCTCTCTCTC 59.742 52.174 0.00 0.00 0.00 3.20
1861 2484 5.337169 GGCTCTCTCTATCTCTCTCTCTCTC 60.337 52.000 0.00 0.00 0.00 3.20
1862 2485 5.337169 GCTCTCTCTATCTCTCTCTCTCTCC 60.337 52.000 0.00 0.00 0.00 3.71
1863 2486 5.087323 TCTCTCTATCTCTCTCTCTCTCCC 58.913 50.000 0.00 0.00 0.00 4.30
1864 2487 4.168101 TCTCTATCTCTCTCTCTCTCCCC 58.832 52.174 0.00 0.00 0.00 4.81
1866 2489 0.110486 ATCTCTCTCTCTCTCCCCGC 59.890 60.000 0.00 0.00 0.00 6.13
1869 2492 1.076339 CTCTCTCTCTCCCCGCCTT 60.076 63.158 0.00 0.00 0.00 4.35
1882 2508 2.575461 GCCTTAGGCCGTACGTGT 59.425 61.111 13.12 0.32 44.06 4.49
1920 2592 0.529773 TGTGCTCGTCACTTGGTCAC 60.530 55.000 10.76 0.00 45.81 3.67
1932 2604 1.270550 CTTGGTCACAACCCATCAAGC 59.729 52.381 0.00 0.00 45.83 4.01
1946 2618 1.970114 CAAGCTGCTGTCCTGTGGG 60.970 63.158 1.35 0.00 0.00 4.61
1948 2620 4.341783 GCTGCTGTCCTGTGGGCT 62.342 66.667 0.00 0.00 0.00 5.19
1949 2621 2.959484 GCTGCTGTCCTGTGGGCTA 61.959 63.158 0.00 0.00 0.00 3.93
1950 2622 1.910722 CTGCTGTCCTGTGGGCTAT 59.089 57.895 0.00 0.00 0.00 2.97
1952 2624 1.153086 GCTGTCCTGTGGGCTATGG 60.153 63.158 0.00 0.00 0.00 2.74
1953 2625 1.153086 CTGTCCTGTGGGCTATGGC 60.153 63.158 0.00 0.00 37.82 4.40
1954 2626 1.616327 TGTCCTGTGGGCTATGGCT 60.616 57.895 0.00 0.00 38.73 4.75
1956 2628 1.059913 GTCCTGTGGGCTATGGCTAT 58.940 55.000 0.00 0.00 38.73 2.97
1957 2629 1.059098 TCCTGTGGGCTATGGCTATG 58.941 55.000 0.00 0.00 38.73 2.23
1958 2630 0.607489 CCTGTGGGCTATGGCTATGC 60.607 60.000 0.00 0.00 38.73 3.14
1959 2631 0.109153 CTGTGGGCTATGGCTATGCA 59.891 55.000 0.00 0.00 38.73 3.96
1960 2632 0.109153 TGTGGGCTATGGCTATGCAG 59.891 55.000 0.00 0.00 38.73 4.41
1991 2665 1.337728 TGTTCTCCGCATGTGAATCGT 60.338 47.619 8.11 0.00 0.00 3.73
1993 2667 0.817654 TCTCCGCATGTGAATCGTCT 59.182 50.000 8.11 0.00 0.00 4.18
1994 2668 1.204704 TCTCCGCATGTGAATCGTCTT 59.795 47.619 8.11 0.00 0.00 3.01
2008 2682 0.643820 CGTCTTACGAATTCACCGGC 59.356 55.000 0.00 0.00 46.05 6.13
2009 2683 1.734707 CGTCTTACGAATTCACCGGCT 60.735 52.381 0.00 0.00 46.05 5.52
2010 2684 2.478370 CGTCTTACGAATTCACCGGCTA 60.478 50.000 0.00 0.00 46.05 3.93
2011 2685 3.114065 GTCTTACGAATTCACCGGCTAG 58.886 50.000 0.00 0.00 0.00 3.42
2012 2686 2.756760 TCTTACGAATTCACCGGCTAGT 59.243 45.455 0.00 0.00 0.00 2.57
2013 2687 3.947196 TCTTACGAATTCACCGGCTAGTA 59.053 43.478 0.00 0.00 0.00 1.82
2014 2688 2.865343 ACGAATTCACCGGCTAGTAG 57.135 50.000 0.00 0.00 0.00 2.57
2015 2689 2.097825 ACGAATTCACCGGCTAGTAGT 58.902 47.619 0.00 0.00 0.00 2.73
2016 2690 3.282021 ACGAATTCACCGGCTAGTAGTA 58.718 45.455 0.00 0.00 0.00 1.82
2017 2691 3.314635 ACGAATTCACCGGCTAGTAGTAG 59.685 47.826 0.00 0.00 0.00 2.57
2064 2738 1.094785 GCCGTAGACATTTGGCACAT 58.905 50.000 0.00 0.00 46.76 3.21
2175 2971 3.845178 CCATAATCGTATGCGGCTCTAA 58.155 45.455 2.62 0.00 36.53 2.10
2176 2972 3.859961 CCATAATCGTATGCGGCTCTAAG 59.140 47.826 2.62 0.00 36.53 2.18
2177 2973 1.784525 AATCGTATGCGGCTCTAAGC 58.215 50.000 2.62 0.00 41.46 3.09
2178 2974 0.673985 ATCGTATGCGGCTCTAAGCA 59.326 50.000 2.62 0.00 44.75 3.91
2182 2978 4.789977 TGCGGCTCTAAGCAAACA 57.210 50.000 0.00 0.00 44.75 2.83
2183 2979 2.244000 TGCGGCTCTAAGCAAACAC 58.756 52.632 0.00 0.00 44.75 3.32
2184 2980 0.250295 TGCGGCTCTAAGCAAACACT 60.250 50.000 0.00 0.00 44.75 3.55
2185 2981 0.166814 GCGGCTCTAAGCAAACACTG 59.833 55.000 0.86 0.00 44.75 3.66
2186 2982 0.798776 CGGCTCTAAGCAAACACTGG 59.201 55.000 0.86 0.00 44.75 4.00
2187 2983 0.523519 GGCTCTAAGCAAACACTGGC 59.476 55.000 0.86 0.00 44.75 4.85
2188 2984 0.166814 GCTCTAAGCAAACACTGGCG 59.833 55.000 0.00 0.00 41.89 5.69
2189 2985 0.798776 CTCTAAGCAAACACTGGCGG 59.201 55.000 0.00 0.00 34.54 6.13
2190 2986 0.394938 TCTAAGCAAACACTGGCGGA 59.605 50.000 0.00 0.00 34.54 5.54
2191 2987 1.003118 TCTAAGCAAACACTGGCGGAT 59.997 47.619 0.00 0.00 34.54 4.18
2192 2988 1.131126 CTAAGCAAACACTGGCGGATG 59.869 52.381 0.00 0.00 34.54 3.51
2193 2989 1.526575 AAGCAAACACTGGCGGATGG 61.527 55.000 0.00 0.00 34.54 3.51
2194 2990 2.993471 GCAAACACTGGCGGATGGG 61.993 63.158 0.00 0.00 0.00 4.00
2195 2991 1.303236 CAAACACTGGCGGATGGGA 60.303 57.895 0.00 0.00 0.00 4.37
2196 2992 1.002134 AAACACTGGCGGATGGGAG 60.002 57.895 0.00 0.00 0.00 4.30
2197 2993 2.484287 AAACACTGGCGGATGGGAGG 62.484 60.000 0.00 0.00 0.00 4.30
2198 2994 3.083349 CACTGGCGGATGGGAGGA 61.083 66.667 0.00 0.00 0.00 3.71
2199 2995 2.765807 ACTGGCGGATGGGAGGAG 60.766 66.667 0.00 0.00 0.00 3.69
2200 2996 3.554342 CTGGCGGATGGGAGGAGG 61.554 72.222 0.00 0.00 0.00 4.30
2203 2999 3.090532 GCGGATGGGAGGAGGGTT 61.091 66.667 0.00 0.00 0.00 4.11
2204 3000 2.680370 GCGGATGGGAGGAGGGTTT 61.680 63.158 0.00 0.00 0.00 3.27
2205 3001 1.342672 GCGGATGGGAGGAGGGTTTA 61.343 60.000 0.00 0.00 0.00 2.01
2206 3002 0.759346 CGGATGGGAGGAGGGTTTAG 59.241 60.000 0.00 0.00 0.00 1.85
2207 3003 1.141185 GGATGGGAGGAGGGTTTAGG 58.859 60.000 0.00 0.00 0.00 2.69
2208 3004 1.628327 GGATGGGAGGAGGGTTTAGGT 60.628 57.143 0.00 0.00 0.00 3.08
2209 3005 1.490910 GATGGGAGGAGGGTTTAGGTG 59.509 57.143 0.00 0.00 0.00 4.00
2210 3006 1.205460 TGGGAGGAGGGTTTAGGTGC 61.205 60.000 0.00 0.00 0.00 5.01
2211 3007 0.914902 GGGAGGAGGGTTTAGGTGCT 60.915 60.000 0.00 0.00 0.00 4.40
2212 3008 1.624391 GGGAGGAGGGTTTAGGTGCTA 60.624 57.143 0.00 0.00 0.00 3.49
2213 3009 1.485480 GGAGGAGGGTTTAGGTGCTAC 59.515 57.143 0.00 0.00 0.00 3.58
2214 3010 2.468915 GAGGAGGGTTTAGGTGCTACT 58.531 52.381 0.00 0.00 0.00 2.57
2215 3011 2.838813 GAGGAGGGTTTAGGTGCTACTT 59.161 50.000 0.00 0.00 0.00 2.24
2216 3012 2.838813 AGGAGGGTTTAGGTGCTACTTC 59.161 50.000 0.00 0.00 0.00 3.01
2217 3013 2.093075 GGAGGGTTTAGGTGCTACTTCC 60.093 54.545 0.00 0.00 0.00 3.46
2218 3014 2.838813 GAGGGTTTAGGTGCTACTTCCT 59.161 50.000 0.00 0.00 37.80 3.36
2219 3015 2.838813 AGGGTTTAGGTGCTACTTCCTC 59.161 50.000 0.00 0.00 35.51 3.71
2220 3016 2.093075 GGGTTTAGGTGCTACTTCCTCC 60.093 54.545 0.00 0.00 35.51 4.30
2221 3017 2.418334 GGTTTAGGTGCTACTTCCTCCG 60.418 54.545 0.00 0.00 35.51 4.63
2222 3018 2.226962 TTAGGTGCTACTTCCTCCGT 57.773 50.000 0.00 0.00 35.51 4.69
2223 3019 2.226962 TAGGTGCTACTTCCTCCGTT 57.773 50.000 0.00 0.00 35.51 4.44
2224 3020 1.349067 AGGTGCTACTTCCTCCGTTT 58.651 50.000 0.00 0.00 0.00 3.60
2225 3021 2.532843 AGGTGCTACTTCCTCCGTTTA 58.467 47.619 0.00 0.00 0.00 2.01
2229 3025 4.153655 GGTGCTACTTCCTCCGTTTAAAAG 59.846 45.833 0.00 0.00 0.00 2.27
2236 3032 5.237996 ACTTCCTCCGTTTAAAAGTAAGTGC 59.762 40.000 0.47 0.00 0.00 4.40
2307 3103 3.981375 GGGAGGAGAAATAATACCACCCT 59.019 47.826 0.00 0.00 45.44 4.34
2327 3135 4.463891 CCCTTTCCTTCCTAACTACACGTA 59.536 45.833 0.00 0.00 0.00 3.57
2490 3302 9.349145 TCTTACTAACTTGTTTTTCAGTTTTGC 57.651 29.630 0.00 0.00 0.00 3.68
2491 3303 9.353999 CTTACTAACTTGTTTTTCAGTTTTGCT 57.646 29.630 0.00 0.00 0.00 3.91
2493 3305 8.911247 ACTAACTTGTTTTTCAGTTTTGCTAG 57.089 30.769 0.00 0.00 0.00 3.42
2494 3306 8.736244 ACTAACTTGTTTTTCAGTTTTGCTAGA 58.264 29.630 0.00 0.00 0.00 2.43
2495 3307 9.567848 CTAACTTGTTTTTCAGTTTTGCTAGAA 57.432 29.630 0.00 0.00 0.00 2.10
2496 3308 7.812309 ACTTGTTTTTCAGTTTTGCTAGAAC 57.188 32.000 0.00 0.00 0.00 3.01
2497 3309 7.602753 ACTTGTTTTTCAGTTTTGCTAGAACT 58.397 30.769 0.00 0.00 37.82 3.01
2498 3310 7.755373 ACTTGTTTTTCAGTTTTGCTAGAACTC 59.245 33.333 0.00 0.00 35.26 3.01
2499 3311 7.151999 TGTTTTTCAGTTTTGCTAGAACTCA 57.848 32.000 0.00 0.00 35.26 3.41
2500 3312 7.771183 TGTTTTTCAGTTTTGCTAGAACTCAT 58.229 30.769 0.00 0.00 35.26 2.90
2501 3313 7.915397 TGTTTTTCAGTTTTGCTAGAACTCATC 59.085 33.333 0.00 0.00 35.26 2.92
2502 3314 7.807977 TTTTCAGTTTTGCTAGAACTCATCT 57.192 32.000 0.00 0.00 42.48 2.90
2503 3315 8.902540 TTTTCAGTTTTGCTAGAACTCATCTA 57.097 30.769 0.00 0.00 39.71 1.98
2531 3343 8.908786 TGAGATATAATTTGGTCTCATTCACC 57.091 34.615 10.50 0.00 41.40 4.02
2532 3344 8.717717 TGAGATATAATTTGGTCTCATTCACCT 58.282 33.333 10.50 0.00 41.40 4.00
2533 3345 9.566432 GAGATATAATTTGGTCTCATTCACCTT 57.434 33.333 8.11 0.00 37.60 3.50
2534 3346 9.927081 AGATATAATTTGGTCTCATTCACCTTT 57.073 29.630 0.00 0.00 34.66 3.11
2540 3352 7.391148 TTTGGTCTCATTCACCTTTTATAGC 57.609 36.000 0.00 0.00 34.66 2.97
2541 3353 5.437060 TGGTCTCATTCACCTTTTATAGCC 58.563 41.667 0.00 0.00 34.66 3.93
2542 3354 5.045213 TGGTCTCATTCACCTTTTATAGCCA 60.045 40.000 0.00 0.00 34.66 4.75
2543 3355 6.064717 GGTCTCATTCACCTTTTATAGCCAT 58.935 40.000 0.00 0.00 0.00 4.40
2544 3356 6.547510 GGTCTCATTCACCTTTTATAGCCATT 59.452 38.462 0.00 0.00 0.00 3.16
2545 3357 7.420800 GTCTCATTCACCTTTTATAGCCATTG 58.579 38.462 0.00 0.00 0.00 2.82
2546 3358 6.547141 TCTCATTCACCTTTTATAGCCATTGG 59.453 38.462 0.00 0.00 0.00 3.16
2547 3359 6.430864 TCATTCACCTTTTATAGCCATTGGA 58.569 36.000 6.95 0.00 0.00 3.53
2548 3360 7.068702 TCATTCACCTTTTATAGCCATTGGAT 58.931 34.615 6.95 1.78 0.00 3.41
2549 3361 6.713762 TTCACCTTTTATAGCCATTGGATG 57.286 37.500 6.95 0.00 0.00 3.51
2550 3362 5.765510 TCACCTTTTATAGCCATTGGATGT 58.234 37.500 6.95 0.10 0.00 3.06
2551 3363 5.593909 TCACCTTTTATAGCCATTGGATGTG 59.406 40.000 6.95 2.95 0.00 3.21
2552 3364 5.593909 CACCTTTTATAGCCATTGGATGTGA 59.406 40.000 6.95 0.00 0.00 3.58
2553 3365 6.266103 CACCTTTTATAGCCATTGGATGTGAT 59.734 38.462 6.95 0.00 0.00 3.06
2554 3366 6.266103 ACCTTTTATAGCCATTGGATGTGATG 59.734 38.462 6.95 0.00 0.00 3.07
2555 3367 5.710513 TTTATAGCCATTGGATGTGATGC 57.289 39.130 6.95 0.00 0.00 3.91
2556 3368 3.520691 ATAGCCATTGGATGTGATGCT 57.479 42.857 6.95 0.00 0.00 3.79
2557 3369 4.645863 ATAGCCATTGGATGTGATGCTA 57.354 40.909 6.95 0.00 0.00 3.49
2558 3370 3.520691 AGCCATTGGATGTGATGCTAT 57.479 42.857 6.95 0.00 0.00 2.97
2559 3371 4.645863 AGCCATTGGATGTGATGCTATA 57.354 40.909 6.95 0.00 0.00 1.31
2560 3372 4.989277 AGCCATTGGATGTGATGCTATAA 58.011 39.130 6.95 0.00 0.00 0.98
2561 3373 5.008331 AGCCATTGGATGTGATGCTATAAG 58.992 41.667 6.95 0.00 0.00 1.73
2562 3374 5.005740 GCCATTGGATGTGATGCTATAAGA 58.994 41.667 6.95 0.00 0.00 2.10
2563 3375 5.651139 GCCATTGGATGTGATGCTATAAGAT 59.349 40.000 6.95 0.00 0.00 2.40
2564 3376 6.404403 GCCATTGGATGTGATGCTATAAGATG 60.404 42.308 6.95 0.00 0.00 2.90
2565 3377 6.404403 CCATTGGATGTGATGCTATAAGATGC 60.404 42.308 0.00 0.00 0.00 3.91
2566 3378 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
2567 3379 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
2568 3380 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
2569 3381 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
2570 3382 3.803778 TGTGATGCTATAAGATGCGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
2571 3383 3.804325 GTGATGCTATAAGATGCGTGTGT 59.196 43.478 0.00 0.00 0.00 3.72
2572 3384 4.982295 GTGATGCTATAAGATGCGTGTGTA 59.018 41.667 0.00 0.00 0.00 2.90
2573 3385 4.982295 TGATGCTATAAGATGCGTGTGTAC 59.018 41.667 0.00 0.00 0.00 2.90
2574 3386 4.649088 TGCTATAAGATGCGTGTGTACT 57.351 40.909 0.00 0.00 0.00 2.73
2575 3387 4.359706 TGCTATAAGATGCGTGTGTACTG 58.640 43.478 0.00 0.00 0.00 2.74
2576 3388 4.097286 TGCTATAAGATGCGTGTGTACTGA 59.903 41.667 0.00 0.00 0.00 3.41
2577 3389 4.441415 GCTATAAGATGCGTGTGTACTGAC 59.559 45.833 0.00 0.00 0.00 3.51
2578 3390 1.698165 AAGATGCGTGTGTACTGACG 58.302 50.000 11.48 11.48 38.63 4.35
2579 3391 0.596577 AGATGCGTGTGTACTGACGT 59.403 50.000 15.55 0.00 37.89 4.34
2580 3392 0.708370 GATGCGTGTGTACTGACGTG 59.292 55.000 15.55 0.00 37.89 4.49
2581 3393 0.666274 ATGCGTGTGTACTGACGTGG 60.666 55.000 15.55 0.00 37.89 4.94
2582 3394 2.019951 GCGTGTGTACTGACGTGGG 61.020 63.158 15.55 0.00 37.89 4.61
2583 3395 1.361271 CGTGTGTACTGACGTGGGT 59.639 57.895 0.00 0.00 0.00 4.51
2584 3396 0.249155 CGTGTGTACTGACGTGGGTT 60.249 55.000 0.00 0.00 0.00 4.11
2585 3397 1.214367 GTGTGTACTGACGTGGGTTG 58.786 55.000 0.00 0.00 0.00 3.77
2586 3398 0.825410 TGTGTACTGACGTGGGTTGT 59.175 50.000 0.00 0.00 0.00 3.32
2587 3399 2.030371 TGTGTACTGACGTGGGTTGTA 58.970 47.619 0.00 0.00 0.00 2.41
2588 3400 2.629137 TGTGTACTGACGTGGGTTGTAT 59.371 45.455 0.00 0.00 0.00 2.29
2589 3401 3.248266 GTGTACTGACGTGGGTTGTATC 58.752 50.000 0.00 0.00 0.00 2.24
2590 3402 3.057033 GTGTACTGACGTGGGTTGTATCT 60.057 47.826 0.00 0.00 0.00 1.98
2591 3403 4.156556 GTGTACTGACGTGGGTTGTATCTA 59.843 45.833 0.00 0.00 0.00 1.98
2592 3404 4.951715 TGTACTGACGTGGGTTGTATCTAT 59.048 41.667 0.00 0.00 0.00 1.98
2593 3405 5.419788 TGTACTGACGTGGGTTGTATCTATT 59.580 40.000 0.00 0.00 0.00 1.73
2594 3406 5.007385 ACTGACGTGGGTTGTATCTATTC 57.993 43.478 0.00 0.00 0.00 1.75
2595 3407 4.710375 ACTGACGTGGGTTGTATCTATTCT 59.290 41.667 0.00 0.00 0.00 2.40
2596 3408 5.187186 ACTGACGTGGGTTGTATCTATTCTT 59.813 40.000 0.00 0.00 0.00 2.52
2597 3409 5.416083 TGACGTGGGTTGTATCTATTCTTG 58.584 41.667 0.00 0.00 0.00 3.02
2598 3410 5.046878 TGACGTGGGTTGTATCTATTCTTGT 60.047 40.000 0.00 0.00 0.00 3.16
2599 3411 5.801380 ACGTGGGTTGTATCTATTCTTGTT 58.199 37.500 0.00 0.00 0.00 2.83
2600 3412 6.235664 ACGTGGGTTGTATCTATTCTTGTTT 58.764 36.000 0.00 0.00 0.00 2.83
2601 3413 6.713450 ACGTGGGTTGTATCTATTCTTGTTTT 59.287 34.615 0.00 0.00 0.00 2.43
2602 3414 7.094933 ACGTGGGTTGTATCTATTCTTGTTTTC 60.095 37.037 0.00 0.00 0.00 2.29
2603 3415 7.094975 CGTGGGTTGTATCTATTCTTGTTTTCA 60.095 37.037 0.00 0.00 0.00 2.69
2604 3416 8.573035 GTGGGTTGTATCTATTCTTGTTTTCAA 58.427 33.333 0.00 0.00 38.21 2.69
2605 3417 9.137459 TGGGTTGTATCTATTCTTGTTTTCAAA 57.863 29.630 0.00 0.00 39.47 2.69
2606 3418 9.626045 GGGTTGTATCTATTCTTGTTTTCAAAG 57.374 33.333 0.00 0.00 39.47 2.77
2616 3428 8.862550 ATTCTTGTTTTCAAAGTGAATGAGAC 57.137 30.769 0.00 0.00 39.47 3.36
2617 3429 6.795399 TCTTGTTTTCAAAGTGAATGAGACC 58.205 36.000 0.00 0.00 39.47 3.85
2618 3430 6.376864 TCTTGTTTTCAAAGTGAATGAGACCA 59.623 34.615 0.00 0.00 39.47 4.02
2619 3431 6.522625 TGTTTTCAAAGTGAATGAGACCAA 57.477 33.333 0.00 0.00 36.11 3.67
2620 3432 6.929625 TGTTTTCAAAGTGAATGAGACCAAA 58.070 32.000 0.00 0.00 36.11 3.28
2621 3433 7.555087 TGTTTTCAAAGTGAATGAGACCAAAT 58.445 30.769 0.00 0.00 36.11 2.32
2622 3434 8.040132 TGTTTTCAAAGTGAATGAGACCAAATT 58.960 29.630 0.00 0.00 36.11 1.82
2623 3435 9.528018 GTTTTCAAAGTGAATGAGACCAAATTA 57.472 29.630 0.00 0.00 36.11 1.40
2653 3465 8.871629 TCATCTAGATGAGTTCTAGGTATTCC 57.128 38.462 27.93 0.00 44.99 3.01
2654 3466 7.891183 TCATCTAGATGAGTTCTAGGTATTCCC 59.109 40.741 27.93 0.00 44.99 3.97
2655 3467 7.123547 CATCTAGATGAGTTCTAGGTATTCCCC 59.876 44.444 25.78 0.00 44.99 4.81
2656 3468 5.426325 AGATGAGTTCTAGGTATTCCCCT 57.574 43.478 0.00 0.00 38.70 4.79
2657 3469 5.793967 AGATGAGTTCTAGGTATTCCCCTT 58.206 41.667 0.00 0.00 35.97 3.95
2658 3470 5.604650 AGATGAGTTCTAGGTATTCCCCTTG 59.395 44.000 0.00 0.00 35.97 3.61
2659 3471 4.695606 TGAGTTCTAGGTATTCCCCTTGT 58.304 43.478 0.00 0.00 35.97 3.16
2660 3472 5.098663 TGAGTTCTAGGTATTCCCCTTGTT 58.901 41.667 0.00 0.00 35.97 2.83
2661 3473 5.550403 TGAGTTCTAGGTATTCCCCTTGTTT 59.450 40.000 0.00 0.00 35.97 2.83
2662 3474 6.045106 TGAGTTCTAGGTATTCCCCTTGTTTT 59.955 38.462 0.00 0.00 35.97 2.43
2669 3481 1.036707 TTCCCCTTGTTTTTCGGCAG 58.963 50.000 0.00 0.00 0.00 4.85
2672 3484 1.028905 CCCTTGTTTTTCGGCAGACA 58.971 50.000 0.00 0.00 0.00 3.41
2681 3493 5.746245 TGTTTTTCGGCAGACACAATAAAAG 59.254 36.000 0.00 0.00 0.00 2.27
2683 3495 1.810151 TCGGCAGACACAATAAAAGCC 59.190 47.619 0.00 0.00 37.32 4.35
2692 3504 5.539955 AGACACAATAAAAGCCCAGATGTTT 59.460 36.000 0.00 0.00 0.00 2.83
2694 3506 7.397192 AGACACAATAAAAGCCCAGATGTTTAT 59.603 33.333 0.00 0.00 0.00 1.40
2695 3507 7.322664 ACACAATAAAAGCCCAGATGTTTATG 58.677 34.615 0.00 0.00 0.00 1.90
2696 3508 7.039082 ACACAATAAAAGCCCAGATGTTTATGT 60.039 33.333 0.00 0.00 0.00 2.29
2698 3510 3.874392 AAAGCCCAGATGTTTATGTGC 57.126 42.857 0.00 0.00 0.00 4.57
2699 3511 2.512692 AGCCCAGATGTTTATGTGCA 57.487 45.000 0.00 0.00 0.00 4.57
2700 3512 2.372264 AGCCCAGATGTTTATGTGCAG 58.628 47.619 0.00 0.00 0.00 4.41
2701 3513 1.406539 GCCCAGATGTTTATGTGCAGG 59.593 52.381 0.00 0.00 0.00 4.85
2702 3514 1.406539 CCCAGATGTTTATGTGCAGGC 59.593 52.381 0.00 0.00 0.00 4.85
2703 3515 2.093890 CCAGATGTTTATGTGCAGGCA 58.906 47.619 0.00 0.00 0.00 4.75
2713 3525 1.009675 GTGCAGGCACAAACACTCG 60.010 57.895 18.84 0.00 45.53 4.18
2721 3533 1.588674 CACAAACACTCGCACCCTTA 58.411 50.000 0.00 0.00 0.00 2.69
2724 3536 1.468520 CAAACACTCGCACCCTTATGG 59.531 52.381 0.00 0.00 41.37 2.74
2731 3543 1.823470 GCACCCTTATGGATGCGCA 60.823 57.895 14.96 14.96 38.00 6.09
2736 3548 0.378257 CCTTATGGATGCGCACACAC 59.622 55.000 14.90 3.53 34.57 3.82
2743 3557 1.086696 GATGCGCACACACACCTTAT 58.913 50.000 14.90 0.00 0.00 1.73
2746 3560 0.721718 GCGCACACACACCTTATCTC 59.278 55.000 0.30 0.00 0.00 2.75
2755 3569 3.134804 ACACACCTTATCTCTATGGGCAC 59.865 47.826 0.00 0.00 0.00 5.01
2773 3587 0.759346 ACCTCCGACATATTGAGCCC 59.241 55.000 0.00 0.00 0.00 5.19
2823 3637 3.438297 AAACATCTCGTAGTCGATGGG 57.562 47.619 0.00 0.00 45.21 4.00
2870 3684 3.282885 GCACCCTGCTAAGCTTAAGATT 58.717 45.455 11.27 11.27 40.96 2.40
2874 3688 5.415701 CACCCTGCTAAGCTTAAGATTTGAA 59.584 40.000 17.20 7.20 0.00 2.69
2881 3695 6.071896 GCTAAGCTTAAGATTTGAACCCAAGT 60.072 38.462 17.20 0.00 33.23 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.392863 CCACATTCATGCCGGTCAGA 60.393 55.000 1.90 0.00 0.00 3.27
4 5 0.677731 ACCACATTCATGCCGGTCAG 60.678 55.000 1.90 0.00 33.10 3.51
5 6 0.615850 TACCACATTCATGCCGGTCA 59.384 50.000 1.90 1.38 37.81 4.02
6 7 1.299541 CTACCACATTCATGCCGGTC 58.700 55.000 1.90 0.00 37.81 4.79
7 8 0.107214 CCTACCACATTCATGCCGGT 60.107 55.000 1.90 6.70 39.41 5.28
8 9 0.107214 ACCTACCACATTCATGCCGG 60.107 55.000 0.00 0.00 0.00 6.13
9 10 1.016627 CACCTACCACATTCATGCCG 58.983 55.000 0.00 0.00 0.00 5.69
10 11 1.392589 CCACCTACCACATTCATGCC 58.607 55.000 0.00 0.00 0.00 4.40
11 12 0.740737 GCCACCTACCACATTCATGC 59.259 55.000 0.00 0.00 0.00 4.06
12 13 1.392589 GGCCACCTACCACATTCATG 58.607 55.000 0.00 0.00 0.00 3.07
13 14 0.107214 CGGCCACCTACCACATTCAT 60.107 55.000 2.24 0.00 0.00 2.57
14 15 1.298340 CGGCCACCTACCACATTCA 59.702 57.895 2.24 0.00 0.00 2.57
15 16 0.743345 GACGGCCACCTACCACATTC 60.743 60.000 2.24 0.00 0.00 2.67
16 17 1.298667 GACGGCCACCTACCACATT 59.701 57.895 2.24 0.00 0.00 2.71
17 18 2.987125 GACGGCCACCTACCACAT 59.013 61.111 2.24 0.00 0.00 3.21
18 19 3.687102 CGACGGCCACCTACCACA 61.687 66.667 2.24 0.00 0.00 4.17
19 20 2.624437 GATCGACGGCCACCTACCAC 62.624 65.000 2.24 0.00 0.00 4.16
20 21 2.363276 ATCGACGGCCACCTACCA 60.363 61.111 2.24 0.00 0.00 3.25
21 22 2.416260 GATCGACGGCCACCTACC 59.584 66.667 2.24 0.00 0.00 3.18
22 23 2.025727 CGATCGACGGCCACCTAC 59.974 66.667 10.26 0.00 38.46 3.18
23 24 3.896133 GCGATCGACGGCCACCTA 61.896 66.667 21.57 0.00 42.83 3.08
25 26 4.891727 ATGCGATCGACGGCCACC 62.892 66.667 21.57 0.00 42.83 4.61
26 27 3.330853 GATGCGATCGACGGCCAC 61.331 66.667 21.57 0.00 42.83 5.01
27 28 3.527427 AGATGCGATCGACGGCCA 61.527 61.111 21.57 7.10 42.83 5.36
28 29 3.032609 CAGATGCGATCGACGGCC 61.033 66.667 21.57 0.24 42.83 6.13
29 30 3.696426 GCAGATGCGATCGACGGC 61.696 66.667 21.57 16.54 42.83 5.68
39 40 2.033049 CAGTGCCATTTAGAGCAGATGC 59.967 50.000 0.00 0.00 40.28 3.91
40 41 3.538591 TCAGTGCCATTTAGAGCAGATG 58.461 45.455 0.00 0.00 40.28 2.90
41 42 3.920231 TCAGTGCCATTTAGAGCAGAT 57.080 42.857 0.00 0.00 40.28 2.90
42 43 3.701205 TTCAGTGCCATTTAGAGCAGA 57.299 42.857 0.00 0.00 40.28 4.26
43 44 4.288670 CATTCAGTGCCATTTAGAGCAG 57.711 45.455 0.00 0.00 40.28 4.24
56 57 1.012998 CATCGTCGCGCATTCAGTG 60.013 57.895 8.75 0.00 0.00 3.66
57 58 2.802667 GCATCGTCGCGCATTCAGT 61.803 57.895 8.75 0.00 0.00 3.41
58 59 2.053638 GCATCGTCGCGCATTCAG 60.054 61.111 8.75 0.00 0.00 3.02
59 60 2.173020 ATGCATCGTCGCGCATTCA 61.173 52.632 8.75 0.00 46.49 2.57
60 61 2.628106 ATGCATCGTCGCGCATTC 59.372 55.556 8.75 0.00 46.49 2.67
63 64 3.256833 CAGATGCATCGTCGCGCA 61.257 61.111 20.67 10.90 43.45 6.09
64 65 3.993234 CCAGATGCATCGTCGCGC 61.993 66.667 20.67 0.00 33.35 6.86
65 66 1.878069 TTCCAGATGCATCGTCGCG 60.878 57.895 20.67 0.00 33.35 5.87
66 67 1.638467 GTTCCAGATGCATCGTCGC 59.362 57.895 20.67 8.09 0.00 5.19
67 68 0.525455 TCGTTCCAGATGCATCGTCG 60.525 55.000 20.67 19.14 0.00 5.12
68 69 1.640428 TTCGTTCCAGATGCATCGTC 58.360 50.000 20.67 9.63 0.00 4.20
69 70 1.732259 GTTTCGTTCCAGATGCATCGT 59.268 47.619 20.67 6.92 0.00 3.73
70 71 1.267038 CGTTTCGTTCCAGATGCATCG 60.267 52.381 20.67 14.92 0.00 3.84
71 72 1.732259 ACGTTTCGTTCCAGATGCATC 59.268 47.619 19.37 19.37 36.35 3.91
72 73 1.464608 CACGTTTCGTTCCAGATGCAT 59.535 47.619 0.00 0.00 38.32 3.96
73 74 0.865111 CACGTTTCGTTCCAGATGCA 59.135 50.000 0.00 0.00 38.32 3.96
74 75 0.452784 GCACGTTTCGTTCCAGATGC 60.453 55.000 0.00 0.00 38.32 3.91
75 76 0.179250 CGCACGTTTCGTTCCAGATG 60.179 55.000 0.00 0.00 38.32 2.90
76 77 1.289109 CCGCACGTTTCGTTCCAGAT 61.289 55.000 6.28 0.00 38.32 2.90
77 78 1.952133 CCGCACGTTTCGTTCCAGA 60.952 57.895 6.28 0.00 38.32 3.86
91 92 0.178767 CATCCAGAATCCTCACCGCA 59.821 55.000 0.00 0.00 0.00 5.69
96 97 1.511613 GGTCCCATCCAGAATCCTCA 58.488 55.000 0.00 0.00 0.00 3.86
104 105 2.060383 TCTGAGCGGTCCCATCCAG 61.060 63.158 12.85 2.10 0.00 3.86
108 109 3.461773 CCGTCTGAGCGGTCCCAT 61.462 66.667 12.85 0.00 46.11 4.00
146 156 3.019564 GCAAGTCGGTAGGAGGTTAGTA 58.980 50.000 0.00 0.00 0.00 1.82
147 157 1.823610 GCAAGTCGGTAGGAGGTTAGT 59.176 52.381 0.00 0.00 0.00 2.24
149 159 2.226962 AGCAAGTCGGTAGGAGGTTA 57.773 50.000 0.00 0.00 0.00 2.85
152 162 1.134965 CAGAAGCAAGTCGGTAGGAGG 60.135 57.143 0.00 0.00 0.00 4.30
164 174 4.692228 GAAATCCAACAAACCAGAAGCAA 58.308 39.130 0.00 0.00 0.00 3.91
165 175 3.243367 CGAAATCCAACAAACCAGAAGCA 60.243 43.478 0.00 0.00 0.00 3.91
166 176 3.004315 TCGAAATCCAACAAACCAGAAGC 59.996 43.478 0.00 0.00 0.00 3.86
198 208 0.107081 AACAAACGTCCATCGACCCA 59.893 50.000 0.00 0.00 42.86 4.51
199 209 0.515564 CAACAAACGTCCATCGACCC 59.484 55.000 0.00 0.00 42.86 4.46
200 210 0.110373 GCAACAAACGTCCATCGACC 60.110 55.000 0.00 0.00 42.86 4.79
201 211 0.584396 TGCAACAAACGTCCATCGAC 59.416 50.000 0.00 0.00 42.86 4.20
202 212 0.584396 GTGCAACAAACGTCCATCGA 59.416 50.000 0.00 0.00 39.00 3.59
203 213 0.721155 CGTGCAACAAACGTCCATCG 60.721 55.000 0.00 0.00 40.96 3.84
204 214 0.385473 CCGTGCAACAAACGTCCATC 60.385 55.000 0.00 0.00 39.38 3.51
205 215 1.098712 ACCGTGCAACAAACGTCCAT 61.099 50.000 0.00 0.00 39.38 3.41
216 226 2.174969 GTCGTCCAACACCGTGCAA 61.175 57.895 0.00 0.00 0.00 4.08
219 229 0.727970 TTTTGTCGTCCAACACCGTG 59.272 50.000 0.00 0.00 31.20 4.94
224 234 2.116827 ACACCTTTTGTCGTCCAACA 57.883 45.000 0.00 0.00 29.79 3.33
237 247 1.189524 TCATCCGGTCCGAACACCTT 61.190 55.000 14.39 0.00 33.77 3.50
262 272 1.063469 CACCAAAACGCTTCTCAACGT 59.937 47.619 0.00 0.00 46.07 3.99
267 277 0.234884 CGTCCACCAAAACGCTTCTC 59.765 55.000 0.00 0.00 31.48 2.87
305 315 1.825090 TGGTCATGTCATGTGAAGGC 58.175 50.000 12.54 0.00 0.00 4.35
312 322 0.794229 GCGCGTTTGGTCATGTCATG 60.794 55.000 8.43 6.47 0.00 3.07
345 360 2.509786 GCCGGACGCGGACAAATA 60.510 61.111 12.47 0.00 0.00 1.40
361 376 0.444260 CTCGAAAAGAGGGCTTTCGC 59.556 55.000 12.75 0.00 43.32 4.70
375 390 0.530744 ATACAAGCCACGCTCTCGAA 59.469 50.000 0.00 0.00 38.25 3.71
376 391 0.179137 CATACAAGCCACGCTCTCGA 60.179 55.000 0.00 0.00 38.25 4.04
377 392 0.179137 TCATACAAGCCACGCTCTCG 60.179 55.000 0.00 0.00 38.25 4.04
378 393 1.134965 ACTCATACAAGCCACGCTCTC 60.135 52.381 0.00 0.00 38.25 3.20
383 398 1.464608 CCAACACTCATACAAGCCACG 59.535 52.381 0.00 0.00 0.00 4.94
390 405 6.061022 ACAATATGGTCCAACACTCATACA 57.939 37.500 0.00 0.00 0.00 2.29
393 408 5.104360 AGCTACAATATGGTCCAACACTCAT 60.104 40.000 0.00 0.00 0.00 2.90
400 415 3.884895 CCACAGCTACAATATGGTCCAA 58.115 45.455 0.00 0.00 0.00 3.53
401 416 2.421388 GCCACAGCTACAATATGGTCCA 60.421 50.000 0.00 0.00 35.50 4.02
402 417 2.222027 GCCACAGCTACAATATGGTCC 58.778 52.381 0.00 0.00 35.50 4.46
408 427 0.036858 TGCGTGCCACAGCTACAATA 60.037 50.000 11.70 0.00 40.80 1.90
431 450 7.492669 TGAGCAGTTCTAAAAAGATCGGAATAG 59.507 37.037 0.00 0.00 0.00 1.73
432 451 7.327975 TGAGCAGTTCTAAAAAGATCGGAATA 58.672 34.615 0.00 0.00 0.00 1.75
435 454 5.147330 TGAGCAGTTCTAAAAAGATCGGA 57.853 39.130 0.00 0.00 0.00 4.55
442 461 2.095263 GGCGCATGAGCAGTTCTAAAAA 60.095 45.455 23.18 0.00 42.27 1.94
443 462 1.468520 GGCGCATGAGCAGTTCTAAAA 59.531 47.619 23.18 0.00 42.27 1.52
551 576 3.909258 AACGTGCCGCTCCAGTACG 62.909 63.158 0.00 0.00 40.30 3.67
598 628 2.759973 CACTCCGAGCAGGCCCTA 60.760 66.667 0.00 0.00 40.77 3.53
606 636 2.105128 CCATCCGTCACTCCGAGC 59.895 66.667 0.00 0.00 0.00 5.03
609 639 1.436336 GTACCCATCCGTCACTCCG 59.564 63.158 0.00 0.00 0.00 4.63
620 650 3.245443 TGCATTGGTAGTTTGGTACCCAT 60.245 43.478 10.07 0.00 41.79 4.00
622 652 2.797786 TGCATTGGTAGTTTGGTACCC 58.202 47.619 10.07 0.00 41.79 3.69
623 653 5.163591 GGTATTGCATTGGTAGTTTGGTACC 60.164 44.000 4.43 4.43 42.68 3.34
624 654 5.416326 TGGTATTGCATTGGTAGTTTGGTAC 59.584 40.000 0.00 0.00 0.00 3.34
625 655 5.571285 TGGTATTGCATTGGTAGTTTGGTA 58.429 37.500 0.00 0.00 0.00 3.25
626 656 4.411927 TGGTATTGCATTGGTAGTTTGGT 58.588 39.130 0.00 0.00 0.00 3.67
627 657 5.596836 ATGGTATTGCATTGGTAGTTTGG 57.403 39.130 0.00 0.00 0.00 3.28
628 658 6.096141 TGGTATGGTATTGCATTGGTAGTTTG 59.904 38.462 0.00 0.00 0.00 2.93
629 659 6.191315 TGGTATGGTATTGCATTGGTAGTTT 58.809 36.000 0.00 0.00 0.00 2.66
630 660 5.761205 TGGTATGGTATTGCATTGGTAGTT 58.239 37.500 0.00 0.00 0.00 2.24
631 661 5.381184 TGGTATGGTATTGCATTGGTAGT 57.619 39.130 0.00 0.00 0.00 2.73
632 662 6.294675 CCAATGGTATGGTATTGCATTGGTAG 60.295 42.308 5.34 0.00 41.31 3.18
633 663 5.538053 CCAATGGTATGGTATTGCATTGGTA 59.462 40.000 5.34 0.00 41.31 3.25
634 664 4.344679 CCAATGGTATGGTATTGCATTGGT 59.655 41.667 5.34 0.00 41.31 3.67
635 665 4.588106 TCCAATGGTATGGTATTGCATTGG 59.412 41.667 6.46 6.46 45.14 3.16
636 666 5.775686 CTCCAATGGTATGGTATTGCATTG 58.224 41.667 0.00 0.00 41.46 2.82
637 667 4.281688 GCTCCAATGGTATGGTATTGCATT 59.718 41.667 0.00 0.00 41.46 3.56
638 668 3.828451 GCTCCAATGGTATGGTATTGCAT 59.172 43.478 0.00 0.00 41.46 3.96
639 669 3.221771 GCTCCAATGGTATGGTATTGCA 58.778 45.455 0.00 0.00 41.46 4.08
640 670 3.221771 TGCTCCAATGGTATGGTATTGC 58.778 45.455 0.00 0.00 41.46 3.56
641 671 7.283127 GGTATATGCTCCAATGGTATGGTATTG 59.717 40.741 0.00 0.00 41.46 1.90
642 672 7.036935 TGGTATATGCTCCAATGGTATGGTATT 60.037 37.037 0.00 0.00 41.46 1.89
643 673 6.446759 TGGTATATGCTCCAATGGTATGGTAT 59.553 38.462 0.00 0.00 41.46 2.73
663 693 0.251073 GCGCCCCGGTATATTGGTAT 59.749 55.000 0.00 0.00 0.00 2.73
773 811 5.854010 TGTATCTCGCTTGAAGGTATCTT 57.146 39.130 0.00 0.00 35.62 2.40
778 816 3.260884 TCCTTTGTATCTCGCTTGAAGGT 59.739 43.478 0.00 0.00 35.03 3.50
779 817 3.861840 TCCTTTGTATCTCGCTTGAAGG 58.138 45.455 0.00 0.00 34.83 3.46
796 864 4.785376 TGCTCTCTATCTTTCCCTTTCCTT 59.215 41.667 0.00 0.00 0.00 3.36
846 918 4.141846 TGCTTCCCTCTCTTTATGCTACAG 60.142 45.833 0.00 0.00 0.00 2.74
847 919 3.774766 TGCTTCCCTCTCTTTATGCTACA 59.225 43.478 0.00 0.00 0.00 2.74
848 920 4.123506 GTGCTTCCCTCTCTTTATGCTAC 58.876 47.826 0.00 0.00 0.00 3.58
849 921 4.033709 AGTGCTTCCCTCTCTTTATGCTA 58.966 43.478 0.00 0.00 0.00 3.49
850 922 2.843113 AGTGCTTCCCTCTCTTTATGCT 59.157 45.455 0.00 0.00 0.00 3.79
912 1004 3.077556 TCTCCTTCTCCCTGCGGC 61.078 66.667 0.00 0.00 0.00 6.53
930 1022 1.790157 TCTCCTTCTCCCCTATCCTCC 59.210 57.143 0.00 0.00 0.00 4.30
940 1032 1.208706 CCTTCCCCTTCTCCTTCTCC 58.791 60.000 0.00 0.00 0.00 3.71
948 1040 1.501654 GCCCTTGTCCTTCCCCTTCT 61.502 60.000 0.00 0.00 0.00 2.85
955 1047 1.228552 TGCCTTGCCCTTGTCCTTC 60.229 57.895 0.00 0.00 0.00 3.46
956 1048 1.228675 CTGCCTTGCCCTTGTCCTT 60.229 57.895 0.00 0.00 0.00 3.36
961 1053 3.379445 CCTGCTGCCTTGCCCTTG 61.379 66.667 0.00 0.00 0.00 3.61
1124 1220 0.528466 GAAGATGATGAGCGCGACCA 60.528 55.000 12.10 6.84 0.00 4.02
1229 1334 2.184533 TGGAGCGAACTCTTTGGGATA 58.815 47.619 0.00 0.00 42.98 2.59
1231 1336 0.762418 TTGGAGCGAACTCTTTGGGA 59.238 50.000 0.00 0.00 42.98 4.37
1234 1339 1.801178 GACCTTGGAGCGAACTCTTTG 59.199 52.381 0.00 0.00 42.98 2.77
1238 1343 1.273886 AGAAGACCTTGGAGCGAACTC 59.726 52.381 0.00 0.00 42.66 3.01
1239 1344 1.273886 GAGAAGACCTTGGAGCGAACT 59.726 52.381 0.00 0.00 0.00 3.01
1240 1345 1.673329 GGAGAAGACCTTGGAGCGAAC 60.673 57.143 0.00 0.00 0.00 3.95
1325 1696 0.449388 GCAACAGCCAGATCTTTCCG 59.551 55.000 0.00 0.00 0.00 4.30
1359 1752 6.306199 TGGGTTGATAACTTGATATGGATGG 58.694 40.000 0.00 0.00 0.00 3.51
1360 1753 7.666804 TGATGGGTTGATAACTTGATATGGATG 59.333 37.037 0.00 0.00 0.00 3.51
1361 1754 7.758609 TGATGGGTTGATAACTTGATATGGAT 58.241 34.615 0.00 0.00 0.00 3.41
1362 1755 7.072328 TCTGATGGGTTGATAACTTGATATGGA 59.928 37.037 0.00 0.00 0.00 3.41
1363 1756 7.226441 TCTGATGGGTTGATAACTTGATATGG 58.774 38.462 0.00 0.00 0.00 2.74
1364 1757 7.094890 GCTCTGATGGGTTGATAACTTGATATG 60.095 40.741 0.00 0.00 0.00 1.78
1365 1758 6.939163 GCTCTGATGGGTTGATAACTTGATAT 59.061 38.462 0.00 0.00 0.00 1.63
1366 1759 6.291377 GCTCTGATGGGTTGATAACTTGATA 58.709 40.000 0.00 0.00 0.00 2.15
1367 1760 5.128919 GCTCTGATGGGTTGATAACTTGAT 58.871 41.667 0.00 0.00 0.00 2.57
1368 1761 4.517285 GCTCTGATGGGTTGATAACTTGA 58.483 43.478 0.00 0.00 0.00 3.02
1369 1762 3.310774 CGCTCTGATGGGTTGATAACTTG 59.689 47.826 0.00 0.00 0.00 3.16
1370 1763 3.535561 CGCTCTGATGGGTTGATAACTT 58.464 45.455 0.00 0.00 0.00 2.66
1371 1764 2.743183 GCGCTCTGATGGGTTGATAACT 60.743 50.000 0.00 0.00 0.00 2.24
1372 1765 1.599542 GCGCTCTGATGGGTTGATAAC 59.400 52.381 0.00 0.00 0.00 1.89
1373 1766 1.486310 AGCGCTCTGATGGGTTGATAA 59.514 47.619 2.64 0.00 0.00 1.75
1374 1767 1.123077 AGCGCTCTGATGGGTTGATA 58.877 50.000 2.64 0.00 0.00 2.15
1375 1768 0.463295 CAGCGCTCTGATGGGTTGAT 60.463 55.000 7.13 0.00 42.95 2.57
1376 1769 1.078918 CAGCGCTCTGATGGGTTGA 60.079 57.895 7.13 0.00 42.95 3.18
1377 1770 3.494378 CAGCGCTCTGATGGGTTG 58.506 61.111 7.13 0.00 42.95 3.77
1462 1912 6.314896 GCAAGTAGTAGCTCTGATTTCACATT 59.685 38.462 0.00 0.00 0.00 2.71
1491 2029 1.277557 GGAGATGCTAGCTATGGGTGG 59.722 57.143 17.23 0.00 0.00 4.61
1492 2030 1.973515 TGGAGATGCTAGCTATGGGTG 59.026 52.381 17.23 0.00 0.00 4.61
1493 2031 2.158249 TCTGGAGATGCTAGCTATGGGT 60.158 50.000 17.23 0.00 0.00 4.51
1494 2032 2.533916 TCTGGAGATGCTAGCTATGGG 58.466 52.381 17.23 0.71 0.00 4.00
1666 2276 3.808466 TGGACGGAAGATCAGATCAAG 57.192 47.619 13.14 3.50 0.00 3.02
1743 2359 0.966179 AGTGAGCGATACACACACCA 59.034 50.000 0.00 0.00 41.80 4.17
1764 2383 5.044030 TGGAACAGTAGAATCTCCTCCTAGT 60.044 44.000 0.00 0.00 0.00 2.57
1834 2456 3.646162 AGAGAGAGATAGAGAGAGCCGAA 59.354 47.826 0.00 0.00 0.00 4.30
1840 2462 5.087323 GGGAGAGAGAGAGAGATAGAGAGA 58.913 50.000 0.00 0.00 0.00 3.10
1850 2472 1.576368 AAGGCGGGGAGAGAGAGAGA 61.576 60.000 0.00 0.00 0.00 3.10
1852 2474 0.183971 CTAAGGCGGGGAGAGAGAGA 59.816 60.000 0.00 0.00 0.00 3.10
1853 2475 0.825840 CCTAAGGCGGGGAGAGAGAG 60.826 65.000 0.00 0.00 0.00 3.20
1866 2489 1.064654 GTCTACACGTACGGCCTAAGG 59.935 57.143 21.06 3.13 0.00 2.69
1869 2492 2.383170 CGTCTACACGTACGGCCTA 58.617 57.895 21.06 4.54 41.42 3.93
1882 2508 3.441222 CACACCCATGTACTACACGTCTA 59.559 47.826 0.00 0.00 36.72 2.59
1887 2559 2.618053 GAGCACACCCATGTACTACAC 58.382 52.381 0.00 0.00 36.72 2.90
1920 2592 0.524862 GACAGCAGCTTGATGGGTTG 59.475 55.000 0.00 0.00 38.24 3.77
1932 2604 0.463295 CATAGCCCACAGGACAGCAG 60.463 60.000 0.00 0.00 33.47 4.24
1952 2624 0.465097 ATGTCACTGGCCTGCATAGC 60.465 55.000 9.95 0.27 0.00 2.97
1953 2625 1.306148 CATGTCACTGGCCTGCATAG 58.694 55.000 9.95 0.00 0.00 2.23
1954 2626 0.620030 ACATGTCACTGGCCTGCATA 59.380 50.000 9.95 0.00 0.00 3.14
1956 2628 0.890542 GAACATGTCACTGGCCTGCA 60.891 55.000 9.95 0.00 0.00 4.41
1957 2629 0.607489 AGAACATGTCACTGGCCTGC 60.607 55.000 9.95 0.00 0.00 4.85
1958 2630 1.446907 GAGAACATGTCACTGGCCTG 58.553 55.000 8.29 8.29 0.00 4.85
1959 2631 0.326264 GGAGAACATGTCACTGGCCT 59.674 55.000 3.32 0.00 0.00 5.19
1960 2632 1.021390 CGGAGAACATGTCACTGGCC 61.021 60.000 0.00 0.00 0.00 5.36
1993 2667 3.696051 ACTACTAGCCGGTGAATTCGTAA 59.304 43.478 1.90 0.00 0.00 3.18
1994 2668 3.282021 ACTACTAGCCGGTGAATTCGTA 58.718 45.455 1.90 0.00 0.00 3.43
2008 2682 6.678568 TGGTACCTACTAGGCTACTACTAG 57.321 45.833 14.36 0.00 39.63 2.57
2009 2683 5.012561 GCTGGTACCTACTAGGCTACTACTA 59.987 48.000 14.36 0.00 39.63 1.82
2010 2684 4.202451 GCTGGTACCTACTAGGCTACTACT 60.202 50.000 14.36 0.00 39.63 2.57
2011 2685 4.071423 GCTGGTACCTACTAGGCTACTAC 58.929 52.174 14.36 0.00 39.63 2.73
2012 2686 3.718434 TGCTGGTACCTACTAGGCTACTA 59.282 47.826 14.36 2.42 39.63 1.82
2013 2687 2.512896 TGCTGGTACCTACTAGGCTACT 59.487 50.000 14.36 0.00 39.63 2.57
2014 2688 2.885894 CTGCTGGTACCTACTAGGCTAC 59.114 54.545 14.36 4.61 39.63 3.58
2015 2689 2.512896 ACTGCTGGTACCTACTAGGCTA 59.487 50.000 14.36 0.00 39.63 3.93
2016 2690 1.288335 ACTGCTGGTACCTACTAGGCT 59.712 52.381 14.36 0.00 39.63 4.58
2017 2691 1.409427 CACTGCTGGTACCTACTAGGC 59.591 57.143 14.36 8.26 39.63 3.93
2018 2692 1.409427 GCACTGCTGGTACCTACTAGG 59.591 57.143 14.36 0.00 42.49 3.02
2107 2781 3.877508 GTGGTACCGGTACTACTACGATT 59.122 47.826 39.14 5.84 42.14 3.34
2175 2971 1.973281 CCATCCGCCAGTGTTTGCT 60.973 57.895 0.00 0.00 0.00 3.91
2176 2972 2.568090 CCATCCGCCAGTGTTTGC 59.432 61.111 0.00 0.00 0.00 3.68
2177 2973 1.303236 TCCCATCCGCCAGTGTTTG 60.303 57.895 0.00 0.00 0.00 2.93
2178 2974 1.002134 CTCCCATCCGCCAGTGTTT 60.002 57.895 0.00 0.00 0.00 2.83
2179 2975 2.671070 CTCCCATCCGCCAGTGTT 59.329 61.111 0.00 0.00 0.00 3.32
2180 2976 3.402681 CCTCCCATCCGCCAGTGT 61.403 66.667 0.00 0.00 0.00 3.55
2181 2977 3.083349 TCCTCCCATCCGCCAGTG 61.083 66.667 0.00 0.00 0.00 3.66
2182 2978 2.765807 CTCCTCCCATCCGCCAGT 60.766 66.667 0.00 0.00 0.00 4.00
2183 2979 3.554342 CCTCCTCCCATCCGCCAG 61.554 72.222 0.00 0.00 0.00 4.85
2186 2982 1.342672 TAAACCCTCCTCCCATCCGC 61.343 60.000 0.00 0.00 0.00 5.54
2187 2983 0.759346 CTAAACCCTCCTCCCATCCG 59.241 60.000 0.00 0.00 0.00 4.18
2188 2984 1.141185 CCTAAACCCTCCTCCCATCC 58.859 60.000 0.00 0.00 0.00 3.51
2189 2985 1.490910 CACCTAAACCCTCCTCCCATC 59.509 57.143 0.00 0.00 0.00 3.51
2190 2986 1.596496 CACCTAAACCCTCCTCCCAT 58.404 55.000 0.00 0.00 0.00 4.00
2191 2987 1.205460 GCACCTAAACCCTCCTCCCA 61.205 60.000 0.00 0.00 0.00 4.37
2192 2988 0.914902 AGCACCTAAACCCTCCTCCC 60.915 60.000 0.00 0.00 0.00 4.30
2193 2989 1.485480 GTAGCACCTAAACCCTCCTCC 59.515 57.143 0.00 0.00 0.00 4.30
2194 2990 2.468915 AGTAGCACCTAAACCCTCCTC 58.531 52.381 0.00 0.00 0.00 3.71
2195 2991 2.644060 AGTAGCACCTAAACCCTCCT 57.356 50.000 0.00 0.00 0.00 3.69
2196 2992 2.093075 GGAAGTAGCACCTAAACCCTCC 60.093 54.545 0.00 0.00 0.00 4.30
2197 2993 2.838813 AGGAAGTAGCACCTAAACCCTC 59.161 50.000 0.00 0.00 34.47 4.30
2198 2994 2.838813 GAGGAAGTAGCACCTAAACCCT 59.161 50.000 0.00 0.00 36.57 4.34
2199 2995 2.093075 GGAGGAAGTAGCACCTAAACCC 60.093 54.545 0.00 0.00 36.57 4.11
2200 2996 2.418334 CGGAGGAAGTAGCACCTAAACC 60.418 54.545 0.00 0.00 36.57 3.27
2201 2997 2.233186 ACGGAGGAAGTAGCACCTAAAC 59.767 50.000 0.00 0.00 36.57 2.01
2202 2998 2.532843 ACGGAGGAAGTAGCACCTAAA 58.467 47.619 0.00 0.00 36.57 1.85
2203 2999 2.226962 ACGGAGGAAGTAGCACCTAA 57.773 50.000 0.00 0.00 36.57 2.69
2204 3000 2.226962 AACGGAGGAAGTAGCACCTA 57.773 50.000 0.00 0.00 36.57 3.08
2205 3001 1.349067 AAACGGAGGAAGTAGCACCT 58.651 50.000 0.00 0.00 39.41 4.00
2206 3002 3.323751 TTAAACGGAGGAAGTAGCACC 57.676 47.619 0.00 0.00 0.00 5.01
2207 3003 4.753610 ACTTTTAAACGGAGGAAGTAGCAC 59.246 41.667 0.00 0.00 0.00 4.40
2208 3004 4.964593 ACTTTTAAACGGAGGAAGTAGCA 58.035 39.130 0.00 0.00 0.00 3.49
2209 3005 6.648310 ACTTACTTTTAAACGGAGGAAGTAGC 59.352 38.462 12.42 0.00 41.54 3.58
2210 3006 7.359849 GCACTTACTTTTAAACGGAGGAAGTAG 60.360 40.741 13.32 10.12 41.45 2.57
2211 3007 6.424812 GCACTTACTTTTAAACGGAGGAAGTA 59.575 38.462 13.32 3.43 41.45 2.24
2212 3008 5.237996 GCACTTACTTTTAAACGGAGGAAGT 59.762 40.000 9.35 9.35 43.55 3.01
2213 3009 5.334646 GGCACTTACTTTTAAACGGAGGAAG 60.335 44.000 8.29 8.29 37.37 3.46
2214 3010 4.516321 GGCACTTACTTTTAAACGGAGGAA 59.484 41.667 0.00 0.00 0.00 3.36
2215 3011 4.067192 GGCACTTACTTTTAAACGGAGGA 58.933 43.478 0.00 0.00 0.00 3.71
2216 3012 3.120442 CGGCACTTACTTTTAAACGGAGG 60.120 47.826 0.00 0.00 0.00 4.30
2217 3013 3.495753 ACGGCACTTACTTTTAAACGGAG 59.504 43.478 0.00 0.00 0.00 4.63
2218 3014 3.465871 ACGGCACTTACTTTTAAACGGA 58.534 40.909 0.00 0.00 0.00 4.69
2219 3015 3.662454 CGACGGCACTTACTTTTAAACGG 60.662 47.826 0.00 0.00 0.00 4.44
2220 3016 3.060339 ACGACGGCACTTACTTTTAAACG 60.060 43.478 0.00 0.00 0.00 3.60
2221 3017 4.457433 ACGACGGCACTTACTTTTAAAC 57.543 40.909 0.00 0.00 0.00 2.01
2222 3018 5.482686 AAACGACGGCACTTACTTTTAAA 57.517 34.783 0.00 0.00 0.00 1.52
2223 3019 5.482686 AAAACGACGGCACTTACTTTTAA 57.517 34.783 0.00 0.00 0.00 1.52
2224 3020 5.752955 ACTAAAACGACGGCACTTACTTTTA 59.247 36.000 0.00 0.00 0.00 1.52
2225 3021 4.571984 ACTAAAACGACGGCACTTACTTTT 59.428 37.500 0.00 0.00 0.00 2.27
2229 3025 3.420927 CGAACTAAAACGACGGCACTTAC 60.421 47.826 0.00 0.00 0.00 2.34
2307 3103 4.523943 TGCTACGTGTAGTTAGGAAGGAAA 59.476 41.667 0.00 0.00 35.65 3.13
2425 3237 4.393062 CCTAAACATGAAACTCTGCGATGT 59.607 41.667 0.00 0.00 0.00 3.06
2429 3241 5.356882 TTTCCTAAACATGAAACTCTGCG 57.643 39.130 0.00 0.00 0.00 5.18
2507 3319 9.566432 AAGGTGAATGAGACCAAATTATATCTC 57.434 33.333 0.00 6.03 38.46 2.75
2508 3320 9.927081 AAAGGTGAATGAGACCAAATTATATCT 57.073 29.630 0.00 0.00 35.76 1.98
2514 3326 8.470002 GCTATAAAAGGTGAATGAGACCAAATT 58.530 33.333 0.00 0.00 35.76 1.82
2515 3327 7.068716 GGCTATAAAAGGTGAATGAGACCAAAT 59.931 37.037 0.00 0.00 35.76 2.32
2516 3328 6.377146 GGCTATAAAAGGTGAATGAGACCAAA 59.623 38.462 0.00 0.00 35.76 3.28
2517 3329 5.885912 GGCTATAAAAGGTGAATGAGACCAA 59.114 40.000 0.00 0.00 35.76 3.67
2518 3330 5.045213 TGGCTATAAAAGGTGAATGAGACCA 60.045 40.000 0.00 0.00 35.76 4.02
2519 3331 5.437060 TGGCTATAAAAGGTGAATGAGACC 58.563 41.667 0.00 0.00 0.00 3.85
2520 3332 7.420800 CAATGGCTATAAAAGGTGAATGAGAC 58.579 38.462 0.00 0.00 0.00 3.36
2521 3333 6.547141 CCAATGGCTATAAAAGGTGAATGAGA 59.453 38.462 0.00 0.00 0.00 3.27
2522 3334 6.547141 TCCAATGGCTATAAAAGGTGAATGAG 59.453 38.462 0.00 0.00 0.00 2.90
2523 3335 6.430864 TCCAATGGCTATAAAAGGTGAATGA 58.569 36.000 0.00 0.00 0.00 2.57
2524 3336 6.713762 TCCAATGGCTATAAAAGGTGAATG 57.286 37.500 0.00 0.00 0.00 2.67
2525 3337 6.840705 ACATCCAATGGCTATAAAAGGTGAAT 59.159 34.615 0.00 0.00 33.60 2.57
2526 3338 6.096705 CACATCCAATGGCTATAAAAGGTGAA 59.903 38.462 0.00 0.00 33.60 3.18
2527 3339 5.593909 CACATCCAATGGCTATAAAAGGTGA 59.406 40.000 0.00 0.00 33.60 4.02
2528 3340 5.593909 TCACATCCAATGGCTATAAAAGGTG 59.406 40.000 0.00 0.00 33.60 4.00
2529 3341 5.765510 TCACATCCAATGGCTATAAAAGGT 58.234 37.500 0.00 0.00 33.60 3.50
2530 3342 6.684686 CATCACATCCAATGGCTATAAAAGG 58.315 40.000 0.00 0.00 33.60 3.11
2531 3343 6.015688 AGCATCACATCCAATGGCTATAAAAG 60.016 38.462 0.00 0.00 33.60 2.27
2532 3344 5.834742 AGCATCACATCCAATGGCTATAAAA 59.165 36.000 0.00 0.00 33.60 1.52
2533 3345 5.387788 AGCATCACATCCAATGGCTATAAA 58.612 37.500 0.00 0.00 33.60 1.40
2534 3346 4.989277 AGCATCACATCCAATGGCTATAA 58.011 39.130 0.00 0.00 33.60 0.98
2535 3347 4.645863 AGCATCACATCCAATGGCTATA 57.354 40.909 0.00 0.00 33.60 1.31
2536 3348 3.520691 AGCATCACATCCAATGGCTAT 57.479 42.857 0.00 0.00 33.60 2.97
2537 3349 4.645863 ATAGCATCACATCCAATGGCTA 57.354 40.909 0.00 0.00 33.60 3.93
2538 3350 3.520691 ATAGCATCACATCCAATGGCT 57.479 42.857 0.00 0.00 33.60 4.75
2539 3351 5.005740 TCTTATAGCATCACATCCAATGGC 58.994 41.667 0.00 0.00 33.60 4.40
2540 3352 6.404403 GCATCTTATAGCATCACATCCAATGG 60.404 42.308 0.00 0.00 33.60 3.16
2541 3353 6.552629 GCATCTTATAGCATCACATCCAATG 58.447 40.000 0.00 0.00 0.00 2.82
2542 3354 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
2543 3355 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
2544 3356 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
2545 3357 4.092529 CACGCATCTTATAGCATCACATCC 59.907 45.833 0.00 0.00 0.00 3.51
2546 3358 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
2547 3359 4.450080 CACACGCATCTTATAGCATCACAT 59.550 41.667 0.00 0.00 0.00 3.21
2548 3360 3.803778 CACACGCATCTTATAGCATCACA 59.196 43.478 0.00 0.00 0.00 3.58
2549 3361 3.804325 ACACACGCATCTTATAGCATCAC 59.196 43.478 0.00 0.00 0.00 3.06
2550 3362 4.058721 ACACACGCATCTTATAGCATCA 57.941 40.909 0.00 0.00 0.00 3.07
2551 3363 5.117745 CAGTACACACGCATCTTATAGCATC 59.882 44.000 0.00 0.00 0.00 3.91
2552 3364 4.984785 CAGTACACACGCATCTTATAGCAT 59.015 41.667 0.00 0.00 0.00 3.79
2553 3365 4.097286 TCAGTACACACGCATCTTATAGCA 59.903 41.667 0.00 0.00 0.00 3.49
2554 3366 4.441415 GTCAGTACACACGCATCTTATAGC 59.559 45.833 0.00 0.00 0.00 2.97
2555 3367 4.671068 CGTCAGTACACACGCATCTTATAG 59.329 45.833 3.95 0.00 0.00 1.31
2556 3368 4.095334 ACGTCAGTACACACGCATCTTATA 59.905 41.667 14.55 0.00 39.73 0.98
2557 3369 3.119602 ACGTCAGTACACACGCATCTTAT 60.120 43.478 14.55 0.00 39.73 1.73
2558 3370 2.227149 ACGTCAGTACACACGCATCTTA 59.773 45.455 14.55 0.00 39.73 2.10
2559 3371 1.000607 ACGTCAGTACACACGCATCTT 60.001 47.619 14.55 0.00 39.73 2.40
2560 3372 0.596577 ACGTCAGTACACACGCATCT 59.403 50.000 14.55 0.00 39.73 2.90
2561 3373 0.708370 CACGTCAGTACACACGCATC 59.292 55.000 14.55 0.00 39.73 3.91
2562 3374 0.666274 CCACGTCAGTACACACGCAT 60.666 55.000 14.55 0.00 39.73 4.73
2563 3375 1.299544 CCACGTCAGTACACACGCA 60.300 57.895 14.55 0.00 39.73 5.24
2564 3376 2.019951 CCCACGTCAGTACACACGC 61.020 63.158 14.55 0.00 39.73 5.34
2565 3377 0.249155 AACCCACGTCAGTACACACG 60.249 55.000 13.39 13.39 41.90 4.49
2566 3378 1.214367 CAACCCACGTCAGTACACAC 58.786 55.000 0.00 0.00 0.00 3.82
2567 3379 0.825410 ACAACCCACGTCAGTACACA 59.175 50.000 0.00 0.00 0.00 3.72
2568 3380 2.798976 TACAACCCACGTCAGTACAC 57.201 50.000 0.00 0.00 0.00 2.90
2569 3381 3.159472 AGATACAACCCACGTCAGTACA 58.841 45.455 0.00 0.00 0.00 2.90
2570 3382 3.863142 AGATACAACCCACGTCAGTAC 57.137 47.619 0.00 0.00 0.00 2.73
2571 3383 5.889853 AGAATAGATACAACCCACGTCAGTA 59.110 40.000 0.00 0.00 0.00 2.74
2572 3384 4.710375 AGAATAGATACAACCCACGTCAGT 59.290 41.667 0.00 0.00 0.00 3.41
2573 3385 5.263968 AGAATAGATACAACCCACGTCAG 57.736 43.478 0.00 0.00 0.00 3.51
2574 3386 5.046878 ACAAGAATAGATACAACCCACGTCA 60.047 40.000 0.00 0.00 0.00 4.35
2575 3387 5.416947 ACAAGAATAGATACAACCCACGTC 58.583 41.667 0.00 0.00 0.00 4.34
2576 3388 5.416271 ACAAGAATAGATACAACCCACGT 57.584 39.130 0.00 0.00 0.00 4.49
2577 3389 6.737254 AAACAAGAATAGATACAACCCACG 57.263 37.500 0.00 0.00 0.00 4.94
2578 3390 8.106247 TGAAAACAAGAATAGATACAACCCAC 57.894 34.615 0.00 0.00 0.00 4.61
2579 3391 8.698973 TTGAAAACAAGAATAGATACAACCCA 57.301 30.769 0.00 0.00 0.00 4.51
2580 3392 9.626045 CTTTGAAAACAAGAATAGATACAACCC 57.374 33.333 0.00 0.00 0.00 4.11
2590 3402 9.950680 GTCTCATTCACTTTGAAAACAAGAATA 57.049 29.630 0.00 0.00 40.12 1.75
2591 3403 7.922811 GGTCTCATTCACTTTGAAAACAAGAAT 59.077 33.333 0.00 0.00 40.12 2.40
2592 3404 7.093988 TGGTCTCATTCACTTTGAAAACAAGAA 60.094 33.333 0.00 0.00 40.12 2.52
2593 3405 6.376864 TGGTCTCATTCACTTTGAAAACAAGA 59.623 34.615 0.00 0.00 40.12 3.02
2594 3406 6.563422 TGGTCTCATTCACTTTGAAAACAAG 58.437 36.000 0.00 0.00 40.12 3.16
2595 3407 6.522625 TGGTCTCATTCACTTTGAAAACAA 57.477 33.333 0.00 0.00 40.12 2.83
2596 3408 6.522625 TTGGTCTCATTCACTTTGAAAACA 57.477 33.333 0.00 0.00 40.12 2.83
2597 3409 8.424274 AATTTGGTCTCATTCACTTTGAAAAC 57.576 30.769 0.00 0.00 40.12 2.43
2633 3445 6.547396 AGGGGAATACCTAGAACTCATCTA 57.453 41.667 0.00 0.00 39.65 1.98
2634 3446 5.426325 AGGGGAATACCTAGAACTCATCT 57.574 43.478 0.00 0.00 39.65 2.90
2635 3447 5.367060 ACAAGGGGAATACCTAGAACTCATC 59.633 44.000 0.00 0.00 40.87 2.92
2636 3448 5.289510 ACAAGGGGAATACCTAGAACTCAT 58.710 41.667 0.00 0.00 40.87 2.90
2637 3449 4.695606 ACAAGGGGAATACCTAGAACTCA 58.304 43.478 0.00 0.00 40.87 3.41
2638 3450 5.695424 AACAAGGGGAATACCTAGAACTC 57.305 43.478 0.00 0.00 40.87 3.01
2639 3451 6.464530 AAAACAAGGGGAATACCTAGAACT 57.535 37.500 0.00 0.00 40.87 3.01
2640 3452 6.128090 CGAAAAACAAGGGGAATACCTAGAAC 60.128 42.308 0.00 0.00 40.87 3.01
2641 3453 5.941647 CGAAAAACAAGGGGAATACCTAGAA 59.058 40.000 0.00 0.00 40.87 2.10
2642 3454 5.493809 CGAAAAACAAGGGGAATACCTAGA 58.506 41.667 0.00 0.00 40.87 2.43
2643 3455 4.638865 CCGAAAAACAAGGGGAATACCTAG 59.361 45.833 0.00 0.00 40.87 3.02
2644 3456 4.591929 CCGAAAAACAAGGGGAATACCTA 58.408 43.478 0.00 0.00 40.87 3.08
2645 3457 3.427573 CCGAAAAACAAGGGGAATACCT 58.572 45.455 0.00 0.00 44.56 3.08
2646 3458 2.094390 GCCGAAAAACAAGGGGAATACC 60.094 50.000 0.00 0.00 39.11 2.73
2647 3459 2.559231 TGCCGAAAAACAAGGGGAATAC 59.441 45.455 0.00 0.00 0.00 1.89
2648 3460 2.823154 CTGCCGAAAAACAAGGGGAATA 59.177 45.455 0.00 0.00 0.00 1.75
2649 3461 1.618343 CTGCCGAAAAACAAGGGGAAT 59.382 47.619 0.00 0.00 0.00 3.01
2650 3462 1.036707 CTGCCGAAAAACAAGGGGAA 58.963 50.000 0.00 0.00 0.00 3.97
2651 3463 0.183971 TCTGCCGAAAAACAAGGGGA 59.816 50.000 0.00 0.00 0.00 4.81
2652 3464 0.313987 GTCTGCCGAAAAACAAGGGG 59.686 55.000 0.00 0.00 0.00 4.79
2653 3465 1.028905 TGTCTGCCGAAAAACAAGGG 58.971 50.000 0.00 0.00 0.00 3.95
2654 3466 1.403679 TGTGTCTGCCGAAAAACAAGG 59.596 47.619 0.00 0.00 0.00 3.61
2655 3467 2.842208 TGTGTCTGCCGAAAAACAAG 57.158 45.000 0.00 0.00 0.00 3.16
2656 3468 3.791973 ATTGTGTCTGCCGAAAAACAA 57.208 38.095 5.26 5.26 0.00 2.83
2657 3469 4.902443 TTATTGTGTCTGCCGAAAAACA 57.098 36.364 0.00 0.00 0.00 2.83
2658 3470 5.332280 GCTTTTATTGTGTCTGCCGAAAAAC 60.332 40.000 0.00 0.00 0.00 2.43
2659 3471 4.742659 GCTTTTATTGTGTCTGCCGAAAAA 59.257 37.500 0.00 0.00 0.00 1.94
2660 3472 4.295051 GCTTTTATTGTGTCTGCCGAAAA 58.705 39.130 0.00 0.00 0.00 2.29
2661 3473 3.305064 GGCTTTTATTGTGTCTGCCGAAA 60.305 43.478 0.00 0.00 0.00 3.46
2662 3474 2.227865 GGCTTTTATTGTGTCTGCCGAA 59.772 45.455 0.00 0.00 0.00 4.30
2669 3481 5.391312 AACATCTGGGCTTTTATTGTGTC 57.609 39.130 0.00 0.00 0.00 3.67
2672 3484 7.322664 CACATAAACATCTGGGCTTTTATTGT 58.677 34.615 0.00 0.00 0.00 2.71
2681 3493 1.406539 CCTGCACATAAACATCTGGGC 59.593 52.381 0.00 0.00 42.22 5.36
2683 3495 2.093890 TGCCTGCACATAAACATCTGG 58.906 47.619 0.00 0.00 0.00 3.86
2695 3507 1.009675 CGAGTGTTTGTGCCTGCAC 60.010 57.895 15.15 15.15 46.33 4.57
2696 3508 2.833533 GCGAGTGTTTGTGCCTGCA 61.834 57.895 0.00 0.00 0.00 4.41
2698 3510 1.009675 GTGCGAGTGTTTGTGCCTG 60.010 57.895 0.00 0.00 0.00 4.85
2699 3511 2.186826 GGTGCGAGTGTTTGTGCCT 61.187 57.895 0.00 0.00 0.00 4.75
2700 3512 2.331451 GGTGCGAGTGTTTGTGCC 59.669 61.111 0.00 0.00 0.00 5.01
2701 3513 1.724582 AAGGGTGCGAGTGTTTGTGC 61.725 55.000 0.00 0.00 0.00 4.57
2702 3514 1.588674 TAAGGGTGCGAGTGTTTGTG 58.411 50.000 0.00 0.00 0.00 3.33
2703 3515 2.151202 CATAAGGGTGCGAGTGTTTGT 58.849 47.619 0.00 0.00 0.00 2.83
2706 3518 0.981183 TCCATAAGGGTGCGAGTGTT 59.019 50.000 0.00 0.00 38.11 3.32
2708 3520 1.586422 CATCCATAAGGGTGCGAGTG 58.414 55.000 0.00 0.00 39.65 3.51
2721 3533 2.334946 GGTGTGTGTGCGCATCCAT 61.335 57.895 15.91 0.00 37.46 3.41
2724 3536 1.062587 GATAAGGTGTGTGTGCGCATC 59.937 52.381 15.91 11.19 37.46 3.91
2729 3541 4.122776 CCATAGAGATAAGGTGTGTGTGC 58.877 47.826 0.00 0.00 0.00 4.57
2731 3543 3.134804 GCCCATAGAGATAAGGTGTGTGT 59.865 47.826 0.00 0.00 0.00 3.72
2736 3548 2.975489 AGGTGCCCATAGAGATAAGGTG 59.025 50.000 0.00 0.00 0.00 4.00
2743 3557 0.755698 GTCGGAGGTGCCCATAGAGA 60.756 60.000 0.00 0.00 0.00 3.10
2746 3560 1.338107 TATGTCGGAGGTGCCCATAG 58.662 55.000 0.00 0.00 0.00 2.23
2755 3569 0.319900 CGGGCTCAATATGTCGGAGG 60.320 60.000 0.00 0.00 0.00 4.30
2764 3578 3.516300 TCTCAAGGTTTACGGGCTCAATA 59.484 43.478 0.00 0.00 0.00 1.90
2773 3587 6.018262 TGACTTTGTCAATCTCAAGGTTTACG 60.018 38.462 0.00 0.00 39.78 3.18
2870 3684 2.223803 ACCAACACACTTGGGTTCAA 57.776 45.000 4.19 0.00 40.16 2.69
2874 3688 3.200918 GGAACCAACACACTTGGGT 57.799 52.632 4.19 0.00 43.35 4.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.