Multiple sequence alignment - TraesCS7B01G019900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G019900 chr7B 100.000 2513 0 0 1 2513 17506731 17509243 0.000000e+00 4641
1 TraesCS7B01G019900 chr7B 86.788 931 74 15 440 1347 17248325 17249229 0.000000e+00 992
2 TraesCS7B01G019900 chr7B 83.130 575 84 7 957 1525 16950986 16951553 1.720000e-141 512
3 TraesCS7B01G019900 chr7B 83.150 546 80 7 988 1527 15935418 15935957 2.910000e-134 488
4 TraesCS7B01G019900 chr7B 84.412 340 51 2 1746 2084 16951781 16952119 1.440000e-87 333
5 TraesCS7B01G019900 chr7B 81.845 336 27 11 40 375 17250531 17250832 4.150000e-63 252
6 TraesCS7B01G019900 chr7D 94.855 1516 54 6 999 2513 74391693 74393185 0.000000e+00 2346
7 TraesCS7B01G019900 chr7D 83.932 529 77 6 998 1525 73743507 73744028 1.340000e-137 499
8 TraesCS7B01G019900 chr7D 84.661 339 52 0 1746 2084 73744137 73744475 3.100000e-89 339
9 TraesCS7B01G019900 chr7D 76.028 705 104 34 798 1468 68901761 68902434 3.140000e-79 305
10 TraesCS7B01G019900 chr7A 94.793 1133 44 5 452 1576 78413503 78414628 0.000000e+00 1751
11 TraesCS7B01G019900 chr7A 89.125 846 54 14 760 1602 78388041 78388851 0.000000e+00 1018
12 TraesCS7B01G019900 chr7A 92.512 641 35 5 1870 2510 78390717 78391344 0.000000e+00 905
13 TraesCS7B01G019900 chr7A 89.820 668 46 6 962 1622 78222620 78223272 0.000000e+00 837
14 TraesCS7B01G019900 chr7A 90.150 599 41 10 1699 2292 78223294 78223879 0.000000e+00 763
15 TraesCS7B01G019900 chr7A 87.842 658 44 19 1869 2510 78392022 78392659 0.000000e+00 739
16 TraesCS7B01G019900 chr7A 96.790 405 7 2 1663 2067 78389263 78389661 0.000000e+00 671
17 TraesCS7B01G019900 chr7A 82.957 575 84 12 956 1525 78217627 78218192 8.020000e-140 507
18 TraesCS7B01G019900 chr7A 89.756 410 20 10 2104 2513 78389659 78390046 2.880000e-139 505
19 TraesCS7B01G019900 chr7A 78.766 697 104 27 838 1517 77706669 77707338 6.420000e-116 427
20 TraesCS7B01G019900 chr7A 89.655 319 26 3 447 759 78387689 78388006 1.400000e-107 399
21 TraesCS7B01G019900 chr7A 98.174 219 4 0 1663 1881 78414627 78414845 1.410000e-102 383
22 TraesCS7B01G019900 chr7A 84.594 357 14 12 1225 1576 78388944 78389264 1.450000e-82 316
23 TraesCS7B01G019900 chr7A 83.819 309 50 0 1746 2054 78218328 78218636 6.800000e-76 294
24 TraesCS7B01G019900 chr7A 75.178 701 120 32 798 1468 74592311 74592987 5.290000e-72 281
25 TraesCS7B01G019900 chr7A 96.026 151 6 0 1940 2090 78414837 78414987 1.930000e-61 246
26 TraesCS7B01G019900 chr7A 77.427 412 74 13 840 1234 71134881 71134472 6.990000e-56 228
27 TraesCS7B01G019900 chr7A 96.429 84 3 0 864 947 78222335 78222418 3.370000e-29 139
28 TraesCS7B01G019900 chr4A 97.902 286 6 0 2228 2513 673872342 673872627 1.740000e-136 496
29 TraesCS7B01G019900 chr5B 95.804 286 12 0 2228 2513 34430292 34430007 1.760000e-126 462
30 TraesCS7B01G019900 chr5B 95.804 286 11 1 2228 2513 661394923 661394639 6.330000e-126 460
31 TraesCS7B01G019900 chr2B 97.692 260 6 0 2254 2513 747410316 747410575 4.930000e-122 448
32 TraesCS7B01G019900 chr2B 73.488 562 115 22 859 1397 76517518 76516968 5.520000e-42 182
33 TraesCS7B01G019900 chr5D 99.471 189 1 0 2246 2434 214784751 214784939 6.660000e-91 344
34 TraesCS7B01G019900 chr3D 95.385 195 9 0 2056 2250 31599631 31599437 6.750000e-81 311
35 TraesCS7B01G019900 chr3B 82.906 117 20 0 17 133 668838051 668838167 3.420000e-19 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G019900 chr7B 17506731 17509243 2512 False 4641.000000 4641 100.000000 1 2513 1 chr7B.!!$F2 2512
1 TraesCS7B01G019900 chr7B 17248325 17250832 2507 False 622.000000 992 84.316500 40 1347 2 chr7B.!!$F4 1307
2 TraesCS7B01G019900 chr7B 15935418 15935957 539 False 488.000000 488 83.150000 988 1527 1 chr7B.!!$F1 539
3 TraesCS7B01G019900 chr7B 16950986 16952119 1133 False 422.500000 512 83.771000 957 2084 2 chr7B.!!$F3 1127
4 TraesCS7B01G019900 chr7D 74391693 74393185 1492 False 2346.000000 2346 94.855000 999 2513 1 chr7D.!!$F2 1514
5 TraesCS7B01G019900 chr7D 73743507 73744475 968 False 419.000000 499 84.296500 998 2084 2 chr7D.!!$F3 1086
6 TraesCS7B01G019900 chr7D 68901761 68902434 673 False 305.000000 305 76.028000 798 1468 1 chr7D.!!$F1 670
7 TraesCS7B01G019900 chr7A 78413503 78414987 1484 False 793.333333 1751 96.331000 452 2090 3 chr7A.!!$F5 1638
8 TraesCS7B01G019900 chr7A 78387689 78392659 4970 False 650.428571 1018 90.039143 447 2513 7 chr7A.!!$F4 2066
9 TraesCS7B01G019900 chr7A 78217627 78223879 6252 False 508.000000 837 88.635000 864 2292 5 chr7A.!!$F3 1428
10 TraesCS7B01G019900 chr7A 77706669 77707338 669 False 427.000000 427 78.766000 838 1517 1 chr7A.!!$F2 679
11 TraesCS7B01G019900 chr7A 74592311 74592987 676 False 281.000000 281 75.178000 798 1468 1 chr7A.!!$F1 670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
211 212 0.034059 CCAGCCTATCACCGATCCAC 59.966 60.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1919 9821 0.179181 GACGCACATTACGAGGTCGA 60.179 55.0 6.35 0.0 43.02 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.009115 GGGGCCACATAGTTATTTTATTCG 57.991 41.667 4.39 0.00 0.00 3.34
24 25 5.766174 GGGGCCACATAGTTATTTTATTCGA 59.234 40.000 4.39 0.00 0.00 3.71
25 26 6.433093 GGGGCCACATAGTTATTTTATTCGAT 59.567 38.462 4.39 0.00 0.00 3.59
26 27 7.305474 GGGCCACATAGTTATTTTATTCGATG 58.695 38.462 4.39 0.00 0.00 3.84
27 28 7.305474 GGCCACATAGTTATTTTATTCGATGG 58.695 38.462 0.00 0.00 0.00 3.51
28 29 7.174253 GGCCACATAGTTATTTTATTCGATGGA 59.826 37.037 0.00 0.00 0.00 3.41
29 30 8.230486 GCCACATAGTTATTTTATTCGATGGAG 58.770 37.037 0.00 0.00 0.00 3.86
30 31 8.721478 CCACATAGTTATTTTATTCGATGGAGG 58.279 37.037 0.00 0.00 0.00 4.30
31 32 8.230486 CACATAGTTATTTTATTCGATGGAGGC 58.770 37.037 0.00 0.00 0.00 4.70
32 33 8.157476 ACATAGTTATTTTATTCGATGGAGGCT 58.843 33.333 0.00 0.00 0.00 4.58
33 34 6.867662 AGTTATTTTATTCGATGGAGGCTG 57.132 37.500 0.00 0.00 0.00 4.85
34 35 5.239525 AGTTATTTTATTCGATGGAGGCTGC 59.760 40.000 0.00 0.00 0.00 5.25
35 36 1.967319 TTTATTCGATGGAGGCTGCC 58.033 50.000 11.65 11.65 0.00 4.85
36 37 1.131638 TTATTCGATGGAGGCTGCCT 58.868 50.000 23.64 23.64 36.03 4.75
44 45 3.313874 GAGGCTGCCTCCAAGCTA 58.686 61.111 33.62 0.00 44.36 3.32
45 46 1.604378 GAGGCTGCCTCCAAGCTAA 59.396 57.895 33.62 0.00 44.36 3.09
46 47 0.463474 GAGGCTGCCTCCAAGCTAAG 60.463 60.000 33.62 0.00 44.36 2.18
47 48 0.911525 AGGCTGCCTCCAAGCTAAGA 60.912 55.000 17.22 0.00 0.00 2.10
48 49 0.463474 GGCTGCCTCCAAGCTAAGAG 60.463 60.000 12.43 6.04 0.00 2.85
54 55 3.191078 CCTCCAAGCTAAGAGGTGATG 57.809 52.381 19.45 0.00 44.01 3.07
55 56 2.559440 CTCCAAGCTAAGAGGTGATGC 58.441 52.381 5.23 0.00 0.00 3.91
56 57 2.170187 CTCCAAGCTAAGAGGTGATGCT 59.830 50.000 5.23 0.00 35.30 3.79
57 58 3.374764 TCCAAGCTAAGAGGTGATGCTA 58.625 45.455 0.00 0.00 33.28 3.49
58 59 3.386078 TCCAAGCTAAGAGGTGATGCTAG 59.614 47.826 0.00 0.00 33.28 3.42
59 60 3.129871 CAAGCTAAGAGGTGATGCTAGC 58.870 50.000 8.10 8.10 33.28 3.42
60 61 2.392662 AGCTAAGAGGTGATGCTAGCA 58.607 47.619 21.85 21.85 31.71 3.49
61 62 2.768527 AGCTAAGAGGTGATGCTAGCAA 59.231 45.455 23.54 2.55 31.71 3.91
62 63 3.390639 AGCTAAGAGGTGATGCTAGCAAT 59.609 43.478 23.54 10.46 31.71 3.56
63 64 4.133078 GCTAAGAGGTGATGCTAGCAATT 58.867 43.478 23.54 5.90 0.00 2.32
64 65 4.578105 GCTAAGAGGTGATGCTAGCAATTT 59.422 41.667 23.54 5.00 0.00 1.82
65 66 5.067023 GCTAAGAGGTGATGCTAGCAATTTT 59.933 40.000 23.54 4.55 0.00 1.82
66 67 6.260936 GCTAAGAGGTGATGCTAGCAATTTTA 59.739 38.462 23.54 11.95 0.00 1.52
67 68 6.690194 AAGAGGTGATGCTAGCAATTTTAG 57.310 37.500 23.54 0.00 0.00 1.85
68 69 5.994250 AGAGGTGATGCTAGCAATTTTAGA 58.006 37.500 23.54 0.00 0.00 2.10
69 70 5.819901 AGAGGTGATGCTAGCAATTTTAGAC 59.180 40.000 23.54 10.01 0.00 2.59
70 71 5.749462 AGGTGATGCTAGCAATTTTAGACT 58.251 37.500 23.54 9.14 0.00 3.24
71 72 6.889198 AGGTGATGCTAGCAATTTTAGACTA 58.111 36.000 23.54 0.00 0.00 2.59
72 73 6.989169 AGGTGATGCTAGCAATTTTAGACTAG 59.011 38.462 23.54 0.00 36.11 2.57
73 74 6.986817 GGTGATGCTAGCAATTTTAGACTAGA 59.013 38.462 23.54 0.00 35.21 2.43
74 75 7.170658 GGTGATGCTAGCAATTTTAGACTAGAG 59.829 40.741 23.54 0.00 35.21 2.43
75 76 7.170658 GTGATGCTAGCAATTTTAGACTAGAGG 59.829 40.741 23.54 0.00 35.21 3.69
76 77 6.791867 TGCTAGCAATTTTAGACTAGAGGA 57.208 37.500 16.84 0.00 35.21 3.71
77 78 7.366847 TGCTAGCAATTTTAGACTAGAGGAT 57.633 36.000 16.84 0.00 35.21 3.24
78 79 7.212976 TGCTAGCAATTTTAGACTAGAGGATG 58.787 38.462 16.84 0.00 35.21 3.51
79 80 6.147000 GCTAGCAATTTTAGACTAGAGGATGC 59.853 42.308 10.63 0.00 35.21 3.91
80 81 5.994250 AGCAATTTTAGACTAGAGGATGCA 58.006 37.500 0.00 0.00 32.76 3.96
81 82 5.819901 AGCAATTTTAGACTAGAGGATGCAC 59.180 40.000 0.00 0.00 32.76 4.57
82 83 5.819901 GCAATTTTAGACTAGAGGATGCACT 59.180 40.000 0.00 0.00 0.00 4.40
83 84 6.317391 GCAATTTTAGACTAGAGGATGCACTT 59.683 38.462 0.00 0.00 0.00 3.16
84 85 7.678218 GCAATTTTAGACTAGAGGATGCACTTG 60.678 40.741 0.00 0.00 0.00 3.16
85 86 5.344743 TTTAGACTAGAGGATGCACTTGG 57.655 43.478 0.00 0.00 0.00 3.61
86 87 1.484240 AGACTAGAGGATGCACTTGGC 59.516 52.381 0.00 0.00 45.13 4.52
99 100 2.291741 GCACTTGGCAATGTATAGAGGC 59.708 50.000 0.00 0.00 43.97 4.70
100 101 3.813443 CACTTGGCAATGTATAGAGGCT 58.187 45.455 0.00 0.00 0.00 4.58
101 102 3.562973 CACTTGGCAATGTATAGAGGCTG 59.437 47.826 0.00 0.00 0.00 4.85
102 103 2.260844 TGGCAATGTATAGAGGCTGC 57.739 50.000 0.00 0.00 0.00 5.25
103 104 1.528129 GGCAATGTATAGAGGCTGCC 58.472 55.000 11.65 11.65 42.28 4.85
104 105 1.072965 GGCAATGTATAGAGGCTGCCT 59.927 52.381 23.64 23.64 44.76 4.75
124 125 4.706842 CTCTAGTAGGAGAGAGAAGGCT 57.293 50.000 0.00 0.00 45.03 4.58
125 126 5.048846 CTCTAGTAGGAGAGAGAAGGCTT 57.951 47.826 0.00 0.00 45.03 4.35
126 127 6.182507 CTCTAGTAGGAGAGAGAAGGCTTA 57.817 45.833 0.00 0.00 45.03 3.09
127 128 6.182507 TCTAGTAGGAGAGAGAAGGCTTAG 57.817 45.833 0.00 0.00 0.00 2.18
128 129 5.906495 TCTAGTAGGAGAGAGAAGGCTTAGA 59.094 44.000 0.00 0.00 0.00 2.10
129 130 5.048846 AGTAGGAGAGAGAAGGCTTAGAG 57.951 47.826 0.00 0.00 0.00 2.43
130 131 3.312736 AGGAGAGAGAAGGCTTAGAGG 57.687 52.381 0.00 0.00 0.00 3.69
131 132 1.686587 GGAGAGAGAAGGCTTAGAGGC 59.313 57.143 0.00 0.00 41.73 4.70
132 133 2.383855 GAGAGAGAAGGCTTAGAGGCA 58.616 52.381 0.00 0.00 44.19 4.75
133 134 2.965147 GAGAGAGAAGGCTTAGAGGCAT 59.035 50.000 0.00 0.00 44.19 4.40
134 135 4.148838 GAGAGAGAAGGCTTAGAGGCATA 58.851 47.826 0.00 0.00 44.19 3.14
135 136 3.895041 AGAGAGAAGGCTTAGAGGCATAC 59.105 47.826 0.00 0.00 44.19 2.39
136 137 3.639094 GAGAGAAGGCTTAGAGGCATACA 59.361 47.826 0.00 0.00 44.19 2.29
137 138 3.386402 AGAGAAGGCTTAGAGGCATACAC 59.614 47.826 0.00 0.00 44.19 2.90
138 139 2.436173 AGAAGGCTTAGAGGCATACACC 59.564 50.000 0.00 0.00 44.19 4.16
139 140 1.879575 AGGCTTAGAGGCATACACCA 58.120 50.000 4.29 0.00 44.19 4.17
140 141 2.412591 AGGCTTAGAGGCATACACCAT 58.587 47.619 4.29 0.00 44.19 3.55
141 142 2.105477 AGGCTTAGAGGCATACACCATG 59.895 50.000 4.29 0.00 44.19 3.66
142 143 2.498167 GCTTAGAGGCATACACCATGG 58.502 52.381 11.19 11.19 34.97 3.66
147 148 4.247781 GCATACACCATGGCTGCT 57.752 55.556 13.04 3.66 34.97 4.24
148 149 2.028130 GCATACACCATGGCTGCTC 58.972 57.895 13.04 0.00 34.97 4.26
149 150 0.465097 GCATACACCATGGCTGCTCT 60.465 55.000 13.04 0.00 34.97 4.09
150 151 1.590932 CATACACCATGGCTGCTCTC 58.409 55.000 13.04 0.00 0.00 3.20
151 152 1.134310 CATACACCATGGCTGCTCTCA 60.134 52.381 13.04 0.00 0.00 3.27
152 153 1.206878 TACACCATGGCTGCTCTCAT 58.793 50.000 13.04 0.00 0.00 2.90
153 154 0.393944 ACACCATGGCTGCTCTCATG 60.394 55.000 13.04 9.52 40.12 3.07
154 155 0.393944 CACCATGGCTGCTCTCATGT 60.394 55.000 13.04 3.11 39.12 3.21
155 156 0.393944 ACCATGGCTGCTCTCATGTG 60.394 55.000 13.04 9.15 39.12 3.21
156 157 1.725557 CCATGGCTGCTCTCATGTGC 61.726 60.000 0.00 0.00 39.12 4.57
157 158 0.748367 CATGGCTGCTCTCATGTGCT 60.748 55.000 0.00 0.00 36.82 4.40
158 159 0.034380 ATGGCTGCTCTCATGTGCTT 60.034 50.000 0.00 0.00 34.18 3.91
159 160 0.251033 TGGCTGCTCTCATGTGCTTT 60.251 50.000 0.00 0.00 34.18 3.51
160 161 0.886563 GGCTGCTCTCATGTGCTTTT 59.113 50.000 0.00 0.00 34.18 2.27
161 162 1.271656 GGCTGCTCTCATGTGCTTTTT 59.728 47.619 0.00 0.00 34.18 1.94
162 163 2.489329 GGCTGCTCTCATGTGCTTTTTA 59.511 45.455 0.00 0.00 34.18 1.52
163 164 3.427233 GGCTGCTCTCATGTGCTTTTTAG 60.427 47.826 0.00 0.00 34.18 1.85
164 165 3.438087 GCTGCTCTCATGTGCTTTTTAGA 59.562 43.478 0.00 0.00 34.18 2.10
165 166 4.096081 GCTGCTCTCATGTGCTTTTTAGAT 59.904 41.667 0.00 0.00 34.18 1.98
166 167 5.392811 GCTGCTCTCATGTGCTTTTTAGATT 60.393 40.000 0.00 0.00 34.18 2.40
167 168 5.946298 TGCTCTCATGTGCTTTTTAGATTG 58.054 37.500 0.00 0.00 34.18 2.67
168 169 5.474532 TGCTCTCATGTGCTTTTTAGATTGT 59.525 36.000 0.00 0.00 34.18 2.71
169 170 6.016024 TGCTCTCATGTGCTTTTTAGATTGTT 60.016 34.615 0.00 0.00 34.18 2.83
170 171 6.865205 GCTCTCATGTGCTTTTTAGATTGTTT 59.135 34.615 0.00 0.00 0.00 2.83
171 172 7.148853 GCTCTCATGTGCTTTTTAGATTGTTTG 60.149 37.037 0.00 0.00 0.00 2.93
172 173 7.147312 TCTCATGTGCTTTTTAGATTGTTTGG 58.853 34.615 0.00 0.00 0.00 3.28
173 174 6.815089 TCATGTGCTTTTTAGATTGTTTGGT 58.185 32.000 0.00 0.00 0.00 3.67
174 175 7.271511 TCATGTGCTTTTTAGATTGTTTGGTT 58.728 30.769 0.00 0.00 0.00 3.67
175 176 7.768120 TCATGTGCTTTTTAGATTGTTTGGTTT 59.232 29.630 0.00 0.00 0.00 3.27
176 177 7.301068 TGTGCTTTTTAGATTGTTTGGTTTG 57.699 32.000 0.00 0.00 0.00 2.93
177 178 7.099764 TGTGCTTTTTAGATTGTTTGGTTTGA 58.900 30.769 0.00 0.00 0.00 2.69
178 179 7.768120 TGTGCTTTTTAGATTGTTTGGTTTGAT 59.232 29.630 0.00 0.00 0.00 2.57
179 180 8.611757 GTGCTTTTTAGATTGTTTGGTTTGATT 58.388 29.630 0.00 0.00 0.00 2.57
180 181 8.610896 TGCTTTTTAGATTGTTTGGTTTGATTG 58.389 29.630 0.00 0.00 0.00 2.67
181 182 7.587392 GCTTTTTAGATTGTTTGGTTTGATTGC 59.413 33.333 0.00 0.00 0.00 3.56
182 183 7.489574 TTTTAGATTGTTTGGTTTGATTGCC 57.510 32.000 0.00 0.00 0.00 4.52
183 184 4.686191 AGATTGTTTGGTTTGATTGCCA 57.314 36.364 0.00 0.00 0.00 4.92
184 185 4.379652 AGATTGTTTGGTTTGATTGCCAC 58.620 39.130 0.00 0.00 34.02 5.01
185 186 2.611225 TGTTTGGTTTGATTGCCACC 57.389 45.000 0.00 0.00 34.02 4.61
186 187 2.114616 TGTTTGGTTTGATTGCCACCT 58.885 42.857 0.00 0.00 34.02 4.00
187 188 3.300388 TGTTTGGTTTGATTGCCACCTA 58.700 40.909 0.00 0.00 34.02 3.08
188 189 3.900601 TGTTTGGTTTGATTGCCACCTAT 59.099 39.130 0.00 0.00 34.02 2.57
189 190 4.244862 GTTTGGTTTGATTGCCACCTATG 58.755 43.478 0.00 0.00 34.02 2.23
198 199 3.099170 CCACCTATGGGCCAGCCT 61.099 66.667 13.78 0.00 43.04 4.58
199 200 1.770110 CCACCTATGGGCCAGCCTA 60.770 63.158 13.78 2.12 43.04 3.93
200 201 1.136329 CCACCTATGGGCCAGCCTAT 61.136 60.000 13.78 12.50 43.04 2.57
201 202 0.326264 CACCTATGGGCCAGCCTATC 59.674 60.000 13.78 0.00 38.31 2.08
202 203 0.104462 ACCTATGGGCCAGCCTATCA 60.104 55.000 13.78 0.00 38.31 2.15
203 204 0.326264 CCTATGGGCCAGCCTATCAC 59.674 60.000 13.78 0.00 38.31 3.06
204 205 0.326264 CTATGGGCCAGCCTATCACC 59.674 60.000 13.78 0.00 38.31 4.02
205 206 1.480212 TATGGGCCAGCCTATCACCG 61.480 60.000 13.78 0.00 38.31 4.94
206 207 3.161450 GGGCCAGCCTATCACCGA 61.161 66.667 4.39 0.00 36.10 4.69
207 208 2.520536 GGGCCAGCCTATCACCGAT 61.521 63.158 4.39 0.00 36.10 4.18
208 209 1.004440 GGCCAGCCTATCACCGATC 60.004 63.158 0.00 0.00 0.00 3.69
209 210 1.004440 GCCAGCCTATCACCGATCC 60.004 63.158 0.00 0.00 0.00 3.36
210 211 1.758440 GCCAGCCTATCACCGATCCA 61.758 60.000 0.00 0.00 0.00 3.41
211 212 0.034059 CCAGCCTATCACCGATCCAC 59.966 60.000 0.00 0.00 0.00 4.02
212 213 1.043816 CAGCCTATCACCGATCCACT 58.956 55.000 0.00 0.00 0.00 4.00
213 214 1.414181 CAGCCTATCACCGATCCACTT 59.586 52.381 0.00 0.00 0.00 3.16
214 215 2.119495 AGCCTATCACCGATCCACTTT 58.881 47.619 0.00 0.00 0.00 2.66
215 216 3.069586 CAGCCTATCACCGATCCACTTTA 59.930 47.826 0.00 0.00 0.00 1.85
216 217 3.069729 AGCCTATCACCGATCCACTTTAC 59.930 47.826 0.00 0.00 0.00 2.01
217 218 3.181469 GCCTATCACCGATCCACTTTACA 60.181 47.826 0.00 0.00 0.00 2.41
218 219 4.682320 GCCTATCACCGATCCACTTTACAA 60.682 45.833 0.00 0.00 0.00 2.41
219 220 5.424757 CCTATCACCGATCCACTTTACAAA 58.575 41.667 0.00 0.00 0.00 2.83
220 221 5.293569 CCTATCACCGATCCACTTTACAAAC 59.706 44.000 0.00 0.00 0.00 2.93
221 222 3.404899 TCACCGATCCACTTTACAAACC 58.595 45.455 0.00 0.00 0.00 3.27
222 223 3.142951 CACCGATCCACTTTACAAACCA 58.857 45.455 0.00 0.00 0.00 3.67
223 224 3.756434 CACCGATCCACTTTACAAACCAT 59.244 43.478 0.00 0.00 0.00 3.55
224 225 4.007659 ACCGATCCACTTTACAAACCATC 58.992 43.478 0.00 0.00 0.00 3.51
225 226 4.261801 CCGATCCACTTTACAAACCATCT 58.738 43.478 0.00 0.00 0.00 2.90
226 227 4.700213 CCGATCCACTTTACAAACCATCTT 59.300 41.667 0.00 0.00 0.00 2.40
227 228 5.163754 CCGATCCACTTTACAAACCATCTTC 60.164 44.000 0.00 0.00 0.00 2.87
228 229 5.411361 CGATCCACTTTACAAACCATCTTCA 59.589 40.000 0.00 0.00 0.00 3.02
229 230 6.094048 CGATCCACTTTACAAACCATCTTCAT 59.906 38.462 0.00 0.00 0.00 2.57
230 231 6.817765 TCCACTTTACAAACCATCTTCATC 57.182 37.500 0.00 0.00 0.00 2.92
231 232 6.303054 TCCACTTTACAAACCATCTTCATCA 58.697 36.000 0.00 0.00 0.00 3.07
232 233 6.947733 TCCACTTTACAAACCATCTTCATCAT 59.052 34.615 0.00 0.00 0.00 2.45
233 234 8.106462 TCCACTTTACAAACCATCTTCATCATA 58.894 33.333 0.00 0.00 0.00 2.15
234 235 8.184192 CCACTTTACAAACCATCTTCATCATAC 58.816 37.037 0.00 0.00 0.00 2.39
235 236 8.729756 CACTTTACAAACCATCTTCATCATACA 58.270 33.333 0.00 0.00 0.00 2.29
236 237 8.730680 ACTTTACAAACCATCTTCATCATACAC 58.269 33.333 0.00 0.00 0.00 2.90
237 238 8.628630 TTTACAAACCATCTTCATCATACACA 57.371 30.769 0.00 0.00 0.00 3.72
238 239 6.748333 ACAAACCATCTTCATCATACACAG 57.252 37.500 0.00 0.00 0.00 3.66
239 240 6.475504 ACAAACCATCTTCATCATACACAGA 58.524 36.000 0.00 0.00 0.00 3.41
240 241 7.114754 ACAAACCATCTTCATCATACACAGAT 58.885 34.615 0.00 0.00 0.00 2.90
241 242 7.066645 ACAAACCATCTTCATCATACACAGATG 59.933 37.037 0.00 0.00 43.25 2.90
242 243 6.244552 ACCATCTTCATCATACACAGATGT 57.755 37.500 6.70 0.00 42.63 3.06
243 244 6.286758 ACCATCTTCATCATACACAGATGTC 58.713 40.000 6.70 0.00 42.63 3.06
244 245 6.099413 ACCATCTTCATCATACACAGATGTCT 59.901 38.462 6.70 0.00 42.63 3.41
245 246 6.645827 CCATCTTCATCATACACAGATGTCTC 59.354 42.308 6.70 0.00 42.63 3.36
246 247 7.435305 CATCTTCATCATACACAGATGTCTCT 58.565 38.462 0.00 0.00 42.63 3.10
247 248 7.415592 TCTTCATCATACACAGATGTCTCTT 57.584 36.000 0.00 0.00 42.63 2.85
248 249 7.845037 TCTTCATCATACACAGATGTCTCTTT 58.155 34.615 0.00 0.00 42.63 2.52
249 250 8.316946 TCTTCATCATACACAGATGTCTCTTTT 58.683 33.333 0.00 0.00 42.63 2.27
250 251 8.484641 TTCATCATACACAGATGTCTCTTTTC 57.515 34.615 0.00 0.00 42.63 2.29
251 252 7.845037 TCATCATACACAGATGTCTCTTTTCT 58.155 34.615 0.00 0.00 42.63 2.52
252 253 7.978414 TCATCATACACAGATGTCTCTTTTCTC 59.022 37.037 0.00 0.00 42.63 2.87
253 254 7.473735 TCATACACAGATGTCTCTTTTCTCT 57.526 36.000 0.00 0.00 40.48 3.10
254 255 8.581253 TCATACACAGATGTCTCTTTTCTCTA 57.419 34.615 0.00 0.00 40.48 2.43
255 256 8.462811 TCATACACAGATGTCTCTTTTCTCTAC 58.537 37.037 0.00 0.00 40.48 2.59
256 257 6.909550 ACACAGATGTCTCTTTTCTCTACT 57.090 37.500 0.00 0.00 31.55 2.57
257 258 6.686630 ACACAGATGTCTCTTTTCTCTACTG 58.313 40.000 0.00 0.00 31.55 2.74
258 259 5.576384 CACAGATGTCTCTTTTCTCTACTGC 59.424 44.000 0.00 0.00 0.00 4.40
259 260 5.108517 CAGATGTCTCTTTTCTCTACTGCC 58.891 45.833 0.00 0.00 0.00 4.85
260 261 3.577649 TGTCTCTTTTCTCTACTGCCG 57.422 47.619 0.00 0.00 0.00 5.69
261 262 2.231478 TGTCTCTTTTCTCTACTGCCGG 59.769 50.000 0.00 0.00 0.00 6.13
262 263 1.204941 TCTCTTTTCTCTACTGCCGGC 59.795 52.381 22.73 22.73 0.00 6.13
263 264 0.108804 TCTTTTCTCTACTGCCGGCG 60.109 55.000 23.90 18.98 0.00 6.46
264 265 0.108804 CTTTTCTCTACTGCCGGCGA 60.109 55.000 23.90 12.02 0.00 5.54
265 266 0.108804 TTTTCTCTACTGCCGGCGAG 60.109 55.000 23.90 21.37 0.00 5.03
266 267 1.248785 TTTCTCTACTGCCGGCGAGT 61.249 55.000 27.00 27.00 0.00 4.18
267 268 1.248785 TTCTCTACTGCCGGCGAGTT 61.249 55.000 28.34 13.96 0.00 3.01
268 269 1.215647 CTCTACTGCCGGCGAGTTT 59.784 57.895 28.34 12.34 0.00 2.66
269 270 1.078759 CTCTACTGCCGGCGAGTTTG 61.079 60.000 28.34 22.06 0.00 2.93
270 271 2.740714 CTACTGCCGGCGAGTTTGC 61.741 63.158 28.34 2.63 0.00 3.68
277 278 2.357034 GGCGAGTTTGCCGTCAGA 60.357 61.111 0.00 0.00 46.75 3.27
278 279 2.383527 GGCGAGTTTGCCGTCAGAG 61.384 63.158 0.00 0.00 46.75 3.35
279 280 1.372997 GCGAGTTTGCCGTCAGAGA 60.373 57.895 0.00 0.00 0.00 3.10
280 281 0.737715 GCGAGTTTGCCGTCAGAGAT 60.738 55.000 0.00 0.00 0.00 2.75
281 282 1.469251 GCGAGTTTGCCGTCAGAGATA 60.469 52.381 0.00 0.00 0.00 1.98
282 283 2.876091 CGAGTTTGCCGTCAGAGATAA 58.124 47.619 0.00 0.00 0.00 1.75
283 284 3.448686 CGAGTTTGCCGTCAGAGATAAT 58.551 45.455 0.00 0.00 0.00 1.28
284 285 3.243877 CGAGTTTGCCGTCAGAGATAATG 59.756 47.826 0.00 0.00 0.00 1.90
285 286 3.535561 AGTTTGCCGTCAGAGATAATGG 58.464 45.455 0.00 0.00 0.00 3.16
286 287 1.953559 TTGCCGTCAGAGATAATGGC 58.046 50.000 0.00 0.00 42.76 4.40
287 288 0.249447 TGCCGTCAGAGATAATGGCG 60.249 55.000 1.53 0.00 45.34 5.69
288 289 0.249489 GCCGTCAGAGATAATGGCGT 60.249 55.000 0.00 0.00 43.99 5.68
289 290 1.491670 CCGTCAGAGATAATGGCGTG 58.508 55.000 0.00 0.00 43.99 5.34
290 291 1.202417 CCGTCAGAGATAATGGCGTGT 60.202 52.381 0.00 0.00 43.99 4.49
291 292 2.120232 CGTCAGAGATAATGGCGTGTC 58.880 52.381 0.00 0.00 40.74 3.67
292 293 2.479560 CGTCAGAGATAATGGCGTGTCA 60.480 50.000 0.00 0.00 40.74 3.58
293 294 2.860735 GTCAGAGATAATGGCGTGTCAC 59.139 50.000 0.00 0.00 0.00 3.67
294 295 1.854743 CAGAGATAATGGCGTGTCACG 59.145 52.381 21.02 21.02 45.88 4.35
295 296 1.749063 AGAGATAATGGCGTGTCACGA 59.251 47.619 28.83 9.47 46.05 4.35
305 306 3.086298 GCGTGTCACGACTTAATTGTC 57.914 47.619 28.83 3.12 46.05 3.18
306 307 2.159881 GCGTGTCACGACTTAATTGTCC 60.160 50.000 28.83 2.59 46.05 4.02
307 308 2.410730 CGTGTCACGACTTAATTGTCCC 59.589 50.000 20.75 0.00 46.05 4.46
308 309 3.660865 GTGTCACGACTTAATTGTCCCT 58.339 45.455 0.00 0.00 33.70 4.20
309 310 4.062991 GTGTCACGACTTAATTGTCCCTT 58.937 43.478 0.00 0.00 33.70 3.95
310 311 4.062293 TGTCACGACTTAATTGTCCCTTG 58.938 43.478 0.00 0.00 33.70 3.61
311 312 4.062991 GTCACGACTTAATTGTCCCTTGT 58.937 43.478 0.00 0.00 33.70 3.16
312 313 5.221481 TGTCACGACTTAATTGTCCCTTGTA 60.221 40.000 0.00 0.00 33.70 2.41
313 314 5.119743 GTCACGACTTAATTGTCCCTTGTAC 59.880 44.000 0.00 0.00 33.70 2.90
314 315 4.992319 CACGACTTAATTGTCCCTTGTACA 59.008 41.667 0.00 0.00 33.70 2.90
315 316 5.120208 CACGACTTAATTGTCCCTTGTACAG 59.880 44.000 0.00 0.00 33.70 2.74
316 317 5.221581 ACGACTTAATTGTCCCTTGTACAGT 60.222 40.000 0.00 0.00 33.70 3.55
317 318 6.015180 ACGACTTAATTGTCCCTTGTACAGTA 60.015 38.462 0.00 0.00 33.70 2.74
318 319 7.039882 CGACTTAATTGTCCCTTGTACAGTAT 58.960 38.462 0.00 0.00 33.70 2.12
319 320 7.222224 CGACTTAATTGTCCCTTGTACAGTATC 59.778 40.741 0.00 0.00 33.70 2.24
320 321 7.913789 ACTTAATTGTCCCTTGTACAGTATCA 58.086 34.615 0.00 0.00 0.00 2.15
321 322 8.548877 ACTTAATTGTCCCTTGTACAGTATCAT 58.451 33.333 0.00 0.00 0.00 2.45
322 323 9.396022 CTTAATTGTCCCTTGTACAGTATCATT 57.604 33.333 0.00 0.00 0.00 2.57
323 324 9.747898 TTAATTGTCCCTTGTACAGTATCATTT 57.252 29.630 0.00 0.53 0.00 2.32
324 325 8.650143 AATTGTCCCTTGTACAGTATCATTTT 57.350 30.769 0.00 0.00 0.00 1.82
325 326 7.447374 TTGTCCCTTGTACAGTATCATTTTG 57.553 36.000 0.00 0.00 0.00 2.44
326 327 5.943416 TGTCCCTTGTACAGTATCATTTTGG 59.057 40.000 0.00 0.00 0.00 3.28
327 328 6.177610 GTCCCTTGTACAGTATCATTTTGGA 58.822 40.000 0.00 0.00 0.00 3.53
328 329 6.316390 GTCCCTTGTACAGTATCATTTTGGAG 59.684 42.308 0.00 0.00 0.00 3.86
329 330 6.012858 TCCCTTGTACAGTATCATTTTGGAGT 60.013 38.462 0.00 0.00 0.00 3.85
330 331 6.316390 CCCTTGTACAGTATCATTTTGGAGTC 59.684 42.308 0.00 0.00 0.00 3.36
331 332 6.878923 CCTTGTACAGTATCATTTTGGAGTCA 59.121 38.462 0.00 0.00 0.00 3.41
332 333 7.554118 CCTTGTACAGTATCATTTTGGAGTCAT 59.446 37.037 0.00 0.00 0.00 3.06
333 334 7.848223 TGTACAGTATCATTTTGGAGTCATG 57.152 36.000 0.00 0.00 0.00 3.07
334 335 7.394016 TGTACAGTATCATTTTGGAGTCATGT 58.606 34.615 0.00 0.00 0.00 3.21
335 336 6.992063 ACAGTATCATTTTGGAGTCATGTC 57.008 37.500 0.00 0.00 0.00 3.06
336 337 6.715280 ACAGTATCATTTTGGAGTCATGTCT 58.285 36.000 0.00 0.00 0.00 3.41
337 338 7.851228 ACAGTATCATTTTGGAGTCATGTCTA 58.149 34.615 0.00 0.00 0.00 2.59
338 339 7.766278 ACAGTATCATTTTGGAGTCATGTCTAC 59.234 37.037 0.00 0.00 0.00 2.59
339 340 7.765819 CAGTATCATTTTGGAGTCATGTCTACA 59.234 37.037 0.19 0.19 0.00 2.74
340 341 8.321353 AGTATCATTTTGGAGTCATGTCTACAA 58.679 33.333 12.88 12.88 36.60 2.41
341 342 8.946085 GTATCATTTTGGAGTCATGTCTACAAA 58.054 33.333 21.77 21.77 43.73 2.83
342 343 8.585471 ATCATTTTGGAGTCATGTCTACAAAT 57.415 30.769 24.80 15.04 44.46 2.32
343 344 8.044060 TCATTTTGGAGTCATGTCTACAAATC 57.956 34.615 24.80 0.53 44.46 2.17
344 345 7.884877 TCATTTTGGAGTCATGTCTACAAATCT 59.115 33.333 24.80 15.50 44.46 2.40
345 346 9.166173 CATTTTGGAGTCATGTCTACAAATCTA 57.834 33.333 24.80 14.41 44.46 1.98
346 347 9.739276 ATTTTGGAGTCATGTCTACAAATCTAA 57.261 29.630 24.80 14.12 44.46 2.10
347 348 9.567776 TTTTGGAGTCATGTCTACAAATCTAAA 57.432 29.630 24.80 11.50 44.46 1.85
348 349 8.777865 TTGGAGTCATGTCTACAAATCTAAAG 57.222 34.615 14.29 0.00 35.61 1.85
349 350 7.331026 TGGAGTCATGTCTACAAATCTAAAGG 58.669 38.462 2.03 0.00 0.00 3.11
350 351 6.763610 GGAGTCATGTCTACAAATCTAAAGGG 59.236 42.308 0.00 0.00 0.00 3.95
351 352 6.116126 AGTCATGTCTACAAATCTAAAGGGC 58.884 40.000 0.00 0.00 0.00 5.19
352 353 6.069963 AGTCATGTCTACAAATCTAAAGGGCT 60.070 38.462 0.00 0.00 0.00 5.19
353 354 6.599638 GTCATGTCTACAAATCTAAAGGGCTT 59.400 38.462 0.00 0.00 0.00 4.35
354 355 6.599244 TCATGTCTACAAATCTAAAGGGCTTG 59.401 38.462 0.00 0.00 0.00 4.01
355 356 5.253330 TGTCTACAAATCTAAAGGGCTTGG 58.747 41.667 0.00 0.00 0.00 3.61
356 357 5.222048 TGTCTACAAATCTAAAGGGCTTGGT 60.222 40.000 0.00 0.00 0.00 3.67
357 358 5.710567 GTCTACAAATCTAAAGGGCTTGGTT 59.289 40.000 0.00 0.00 0.00 3.67
358 359 4.871933 ACAAATCTAAAGGGCTTGGTTG 57.128 40.909 0.00 0.00 0.00 3.77
359 360 4.223144 ACAAATCTAAAGGGCTTGGTTGT 58.777 39.130 0.00 0.00 0.00 3.32
360 361 5.390387 ACAAATCTAAAGGGCTTGGTTGTA 58.610 37.500 0.00 0.00 0.00 2.41
361 362 6.016555 ACAAATCTAAAGGGCTTGGTTGTAT 58.983 36.000 0.00 0.00 0.00 2.29
362 363 6.496911 ACAAATCTAAAGGGCTTGGTTGTATT 59.503 34.615 0.00 0.00 0.00 1.89
363 364 7.016170 ACAAATCTAAAGGGCTTGGTTGTATTT 59.984 33.333 0.00 0.00 0.00 1.40
364 365 7.553504 AATCTAAAGGGCTTGGTTGTATTTT 57.446 32.000 0.00 0.00 0.00 1.82
365 366 6.987403 TCTAAAGGGCTTGGTTGTATTTTT 57.013 33.333 0.00 0.00 0.00 1.94
390 391 1.439644 TTTTTGCCCAACTGTCCGC 59.560 52.632 0.00 0.00 0.00 5.54
391 392 2.022240 TTTTTGCCCAACTGTCCGCC 62.022 55.000 0.00 0.00 0.00 6.13
392 393 2.920076 TTTTGCCCAACTGTCCGCCT 62.920 55.000 0.00 0.00 0.00 5.52
393 394 3.842925 TTGCCCAACTGTCCGCCTC 62.843 63.158 0.00 0.00 0.00 4.70
395 396 3.636231 CCCAACTGTCCGCCTCCA 61.636 66.667 0.00 0.00 0.00 3.86
396 397 2.358737 CCAACTGTCCGCCTCCAC 60.359 66.667 0.00 0.00 0.00 4.02
397 398 2.738521 CAACTGTCCGCCTCCACG 60.739 66.667 0.00 0.00 0.00 4.94
398 399 2.915659 AACTGTCCGCCTCCACGA 60.916 61.111 0.00 0.00 34.06 4.35
399 400 2.283529 AACTGTCCGCCTCCACGAT 61.284 57.895 0.00 0.00 34.06 3.73
400 401 2.105128 CTGTCCGCCTCCACGATC 59.895 66.667 0.00 0.00 34.06 3.69
401 402 3.432051 CTGTCCGCCTCCACGATCC 62.432 68.421 0.00 0.00 34.06 3.36
402 403 3.458163 GTCCGCCTCCACGATCCA 61.458 66.667 0.00 0.00 34.06 3.41
403 404 3.458163 TCCGCCTCCACGATCCAC 61.458 66.667 0.00 0.00 34.06 4.02
404 405 3.770040 CCGCCTCCACGATCCACA 61.770 66.667 0.00 0.00 34.06 4.17
405 406 2.509336 CGCCTCCACGATCCACAC 60.509 66.667 0.00 0.00 34.06 3.82
406 407 2.662596 GCCTCCACGATCCACACA 59.337 61.111 0.00 0.00 0.00 3.72
407 408 1.741770 GCCTCCACGATCCACACAC 60.742 63.158 0.00 0.00 0.00 3.82
408 409 1.975327 CCTCCACGATCCACACACT 59.025 57.895 0.00 0.00 0.00 3.55
409 410 0.108615 CCTCCACGATCCACACACTC 60.109 60.000 0.00 0.00 0.00 3.51
410 411 0.108615 CTCCACGATCCACACACTCC 60.109 60.000 0.00 0.00 0.00 3.85
411 412 0.541998 TCCACGATCCACACACTCCT 60.542 55.000 0.00 0.00 0.00 3.69
412 413 0.390340 CCACGATCCACACACTCCTG 60.390 60.000 0.00 0.00 0.00 3.86
413 414 0.603065 CACGATCCACACACTCCTGA 59.397 55.000 0.00 0.00 0.00 3.86
414 415 1.205655 CACGATCCACACACTCCTGAT 59.794 52.381 0.00 0.00 0.00 2.90
415 416 1.478510 ACGATCCACACACTCCTGATC 59.521 52.381 0.00 0.00 0.00 2.92
416 417 1.478105 CGATCCACACACTCCTGATCA 59.522 52.381 0.00 0.00 33.14 2.92
417 418 2.102084 CGATCCACACACTCCTGATCAT 59.898 50.000 0.00 0.00 33.14 2.45
418 419 3.319122 CGATCCACACACTCCTGATCATA 59.681 47.826 0.00 0.00 33.14 2.15
419 420 4.558296 CGATCCACACACTCCTGATCATAG 60.558 50.000 0.00 0.00 33.14 2.23
420 421 3.981212 TCCACACACTCCTGATCATAGA 58.019 45.455 11.18 4.22 0.00 1.98
421 422 4.352893 TCCACACACTCCTGATCATAGAA 58.647 43.478 11.18 0.00 0.00 2.10
422 423 4.777366 TCCACACACTCCTGATCATAGAAA 59.223 41.667 11.18 0.00 0.00 2.52
423 424 4.872691 CCACACACTCCTGATCATAGAAAC 59.127 45.833 11.18 0.00 0.00 2.78
424 425 5.482006 CACACACTCCTGATCATAGAAACA 58.518 41.667 11.18 0.00 0.00 2.83
425 426 5.579904 CACACACTCCTGATCATAGAAACAG 59.420 44.000 11.18 0.00 0.00 3.16
426 427 5.247110 ACACACTCCTGATCATAGAAACAGT 59.753 40.000 11.18 0.00 0.00 3.55
427 428 5.809562 CACACTCCTGATCATAGAAACAGTC 59.190 44.000 11.18 0.00 0.00 3.51
428 429 5.481824 ACACTCCTGATCATAGAAACAGTCA 59.518 40.000 11.18 0.00 0.00 3.41
429 430 6.014242 ACACTCCTGATCATAGAAACAGTCAA 60.014 38.462 11.18 0.00 0.00 3.18
430 431 6.875726 CACTCCTGATCATAGAAACAGTCAAA 59.124 38.462 11.18 0.00 0.00 2.69
431 432 6.876257 ACTCCTGATCATAGAAACAGTCAAAC 59.124 38.462 11.18 0.00 0.00 2.93
432 433 6.768483 TCCTGATCATAGAAACAGTCAAACA 58.232 36.000 0.00 0.00 0.00 2.83
433 434 6.875726 TCCTGATCATAGAAACAGTCAAACAG 59.124 38.462 0.00 0.00 0.00 3.16
434 435 6.652481 CCTGATCATAGAAACAGTCAAACAGT 59.348 38.462 0.00 0.00 0.00 3.55
435 436 7.819415 CCTGATCATAGAAACAGTCAAACAGTA 59.181 37.037 0.00 0.00 0.00 2.74
436 437 9.376075 CTGATCATAGAAACAGTCAAACAGTAT 57.624 33.333 0.00 0.00 0.00 2.12
437 438 9.725019 TGATCATAGAAACAGTCAAACAGTATT 57.275 29.630 0.00 0.00 0.00 1.89
438 439 9.979270 GATCATAGAAACAGTCAAACAGTATTG 57.021 33.333 0.00 0.00 0.00 1.90
439 440 8.322906 TCATAGAAACAGTCAAACAGTATTGG 57.677 34.615 0.00 0.00 0.00 3.16
440 441 7.936847 TCATAGAAACAGTCAAACAGTATTGGT 59.063 33.333 0.00 0.00 0.00 3.67
441 442 9.214957 CATAGAAACAGTCAAACAGTATTGGTA 57.785 33.333 0.00 0.00 0.00 3.25
442 443 9.959721 ATAGAAACAGTCAAACAGTATTGGTAT 57.040 29.630 0.00 0.00 0.00 2.73
443 444 8.691661 AGAAACAGTCAAACAGTATTGGTATT 57.308 30.769 0.00 0.00 0.00 1.89
515 518 4.999950 ACAAACACTCAGGAATCAAGCTAG 59.000 41.667 0.00 0.00 0.00 3.42
539 542 3.002759 GGCAACAGAAATTAGCGAGATCC 59.997 47.826 0.00 0.00 0.00 3.36
560 563 4.025858 ACGCCATGGCAGCTCTGT 62.026 61.111 34.93 20.91 42.06 3.41
834 875 3.960136 TGCCCAAAGCCCGCTACA 61.960 61.111 0.00 0.00 42.71 2.74
836 877 2.351276 CCCAAAGCCCGCTACACT 59.649 61.111 0.00 0.00 0.00 3.55
889 930 1.571215 CGTAACCGCCTCAACCAACC 61.571 60.000 0.00 0.00 0.00 3.77
890 931 1.301874 TAACCGCCTCAACCAACCG 60.302 57.895 0.00 0.00 0.00 4.44
1527 8074 2.098770 GCCATGACCTGCTTCTTGAATC 59.901 50.000 0.00 0.00 0.00 2.52
1528 8075 3.618351 CCATGACCTGCTTCTTGAATCT 58.382 45.455 0.00 0.00 0.00 2.40
1529 8076 4.015084 CCATGACCTGCTTCTTGAATCTT 58.985 43.478 0.00 0.00 0.00 2.40
1530 8077 4.142447 CCATGACCTGCTTCTTGAATCTTG 60.142 45.833 0.00 0.00 0.00 3.02
1531 8078 4.356405 TGACCTGCTTCTTGAATCTTGA 57.644 40.909 0.00 0.00 0.00 3.02
1532 8079 4.914983 TGACCTGCTTCTTGAATCTTGAT 58.085 39.130 0.00 0.00 0.00 2.57
1533 8080 6.053632 TGACCTGCTTCTTGAATCTTGATA 57.946 37.500 0.00 0.00 0.00 2.15
1534 8081 6.475504 TGACCTGCTTCTTGAATCTTGATAA 58.524 36.000 0.00 0.00 0.00 1.75
1535 8082 7.114754 TGACCTGCTTCTTGAATCTTGATAAT 58.885 34.615 0.00 0.00 0.00 1.28
1536 8083 7.613022 TGACCTGCTTCTTGAATCTTGATAATT 59.387 33.333 0.00 0.00 0.00 1.40
1537 8084 7.769220 ACCTGCTTCTTGAATCTTGATAATTG 58.231 34.615 0.00 0.00 0.00 2.32
1881 8530 3.385384 CTGAGGGACGAGCTGGCA 61.385 66.667 0.00 0.00 0.00 4.92
1944 9846 2.845739 CGTAATGTGCGTCCGAGCG 61.846 63.158 0.00 0.00 40.67 5.03
2324 10227 6.833041 TGAAACTGTCAGGAGTTGGTAATTA 58.167 36.000 4.53 0.00 36.28 1.40
2339 10242 4.155099 TGGTAATTATCGGCAACTGTTGTG 59.845 41.667 20.57 13.89 0.00 3.33
2450 11666 6.759272 TGCAGTACCTCCATTTGATACTATC 58.241 40.000 0.00 0.00 0.00 2.08
2501 11717 7.640240 GCGTAAAGCCATTGAAAGTTATAGAAG 59.360 37.037 0.00 0.00 40.81 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.870971 TCGAATAAAATAACTATGTGGCCC 57.129 37.500 0.00 0.00 0.00 5.80
2 3 7.174253 TCCATCGAATAAAATAACTATGTGGCC 59.826 37.037 0.00 0.00 0.00 5.36
3 4 8.094798 TCCATCGAATAAAATAACTATGTGGC 57.905 34.615 0.00 0.00 0.00 5.01
6 7 8.157476 AGCCTCCATCGAATAAAATAACTATGT 58.843 33.333 0.00 0.00 0.00 2.29
8 9 7.119846 GCAGCCTCCATCGAATAAAATAACTAT 59.880 37.037 0.00 0.00 0.00 2.12
10 11 5.239525 GCAGCCTCCATCGAATAAAATAACT 59.760 40.000 0.00 0.00 0.00 2.24
11 12 5.452777 GCAGCCTCCATCGAATAAAATAAC 58.547 41.667 0.00 0.00 0.00 1.89
12 13 4.518970 GGCAGCCTCCATCGAATAAAATAA 59.481 41.667 3.29 0.00 0.00 1.40
13 14 4.072131 GGCAGCCTCCATCGAATAAAATA 58.928 43.478 3.29 0.00 0.00 1.40
14 15 2.887152 GGCAGCCTCCATCGAATAAAAT 59.113 45.455 3.29 0.00 0.00 1.82
15 16 2.092429 AGGCAGCCTCCATCGAATAAAA 60.092 45.455 8.70 0.00 0.00 1.52
16 17 1.490490 AGGCAGCCTCCATCGAATAAA 59.510 47.619 8.70 0.00 0.00 1.40
17 18 1.070758 GAGGCAGCCTCCATCGAATAA 59.929 52.381 29.22 0.00 44.36 1.40
18 19 0.681733 GAGGCAGCCTCCATCGAATA 59.318 55.000 29.22 0.00 44.36 1.75
19 20 1.449353 GAGGCAGCCTCCATCGAAT 59.551 57.895 29.22 0.00 44.36 3.34
20 21 2.903357 GAGGCAGCCTCCATCGAA 59.097 61.111 29.22 0.00 44.36 3.71
28 29 0.911525 TCTTAGCTTGGAGGCAGCCT 60.912 55.000 16.12 16.12 38.09 4.58
29 30 0.463474 CTCTTAGCTTGGAGGCAGCC 60.463 60.000 1.84 1.84 38.09 4.85
30 31 0.463474 CCTCTTAGCTTGGAGGCAGC 60.463 60.000 17.75 0.00 41.92 5.25
31 32 3.776616 CCTCTTAGCTTGGAGGCAG 57.223 57.895 17.75 0.71 41.92 4.85
35 36 2.170187 AGCATCACCTCTTAGCTTGGAG 59.830 50.000 0.00 0.00 29.98 3.86
36 37 2.191400 AGCATCACCTCTTAGCTTGGA 58.809 47.619 0.00 0.00 29.98 3.53
37 38 2.706339 AGCATCACCTCTTAGCTTGG 57.294 50.000 0.00 0.00 29.98 3.61
38 39 3.129871 GCTAGCATCACCTCTTAGCTTG 58.870 50.000 10.63 0.00 36.80 4.01
39 40 2.768527 TGCTAGCATCACCTCTTAGCTT 59.231 45.455 14.93 0.00 36.80 3.74
40 41 2.392662 TGCTAGCATCACCTCTTAGCT 58.607 47.619 14.93 0.00 39.22 3.32
41 42 2.898729 TGCTAGCATCACCTCTTAGC 57.101 50.000 14.93 0.00 0.00 3.09
42 43 6.690194 AAAATTGCTAGCATCACCTCTTAG 57.310 37.500 20.13 0.00 0.00 2.18
43 44 7.495934 GTCTAAAATTGCTAGCATCACCTCTTA 59.504 37.037 20.13 0.00 0.00 2.10
44 45 6.317391 GTCTAAAATTGCTAGCATCACCTCTT 59.683 38.462 20.13 7.90 0.00 2.85
45 46 5.819901 GTCTAAAATTGCTAGCATCACCTCT 59.180 40.000 20.13 2.50 0.00 3.69
46 47 5.819901 AGTCTAAAATTGCTAGCATCACCTC 59.180 40.000 20.13 5.81 0.00 3.85
47 48 5.749462 AGTCTAAAATTGCTAGCATCACCT 58.251 37.500 20.13 5.21 0.00 4.00
48 49 6.986817 TCTAGTCTAAAATTGCTAGCATCACC 59.013 38.462 20.13 1.71 33.06 4.02
49 50 7.170658 CCTCTAGTCTAAAATTGCTAGCATCAC 59.829 40.741 20.13 7.53 33.06 3.06
50 51 7.069950 TCCTCTAGTCTAAAATTGCTAGCATCA 59.930 37.037 20.13 4.60 33.06 3.07
51 52 7.437748 TCCTCTAGTCTAAAATTGCTAGCATC 58.562 38.462 20.13 2.41 33.06 3.91
52 53 7.366847 TCCTCTAGTCTAAAATTGCTAGCAT 57.633 36.000 20.13 5.96 33.06 3.79
53 54 6.791867 TCCTCTAGTCTAAAATTGCTAGCA 57.208 37.500 14.93 14.93 33.06 3.49
54 55 6.147000 GCATCCTCTAGTCTAAAATTGCTAGC 59.853 42.308 8.10 8.10 33.06 3.42
55 56 7.170658 GTGCATCCTCTAGTCTAAAATTGCTAG 59.829 40.741 0.00 0.00 34.00 3.42
56 57 6.986817 GTGCATCCTCTAGTCTAAAATTGCTA 59.013 38.462 0.00 0.00 0.00 3.49
57 58 5.819901 GTGCATCCTCTAGTCTAAAATTGCT 59.180 40.000 0.00 0.00 0.00 3.91
58 59 5.819901 AGTGCATCCTCTAGTCTAAAATTGC 59.180 40.000 0.00 0.00 0.00 3.56
59 60 7.201679 CCAAGTGCATCCTCTAGTCTAAAATTG 60.202 40.741 0.00 0.00 0.00 2.32
60 61 6.825721 CCAAGTGCATCCTCTAGTCTAAAATT 59.174 38.462 0.00 0.00 0.00 1.82
61 62 6.352516 CCAAGTGCATCCTCTAGTCTAAAAT 58.647 40.000 0.00 0.00 0.00 1.82
62 63 5.734720 CCAAGTGCATCCTCTAGTCTAAAA 58.265 41.667 0.00 0.00 0.00 1.52
63 64 4.383118 GCCAAGTGCATCCTCTAGTCTAAA 60.383 45.833 0.00 0.00 40.77 1.85
64 65 3.133003 GCCAAGTGCATCCTCTAGTCTAA 59.867 47.826 0.00 0.00 40.77 2.10
65 66 2.695666 GCCAAGTGCATCCTCTAGTCTA 59.304 50.000 0.00 0.00 40.77 2.59
66 67 1.484240 GCCAAGTGCATCCTCTAGTCT 59.516 52.381 0.00 0.00 40.77 3.24
67 68 1.946745 GCCAAGTGCATCCTCTAGTC 58.053 55.000 0.00 0.00 40.77 2.59
78 79 2.291741 GCCTCTATACATTGCCAAGTGC 59.708 50.000 0.00 0.00 41.77 4.40
79 80 3.562973 CAGCCTCTATACATTGCCAAGTG 59.437 47.826 0.00 0.00 0.00 3.16
80 81 3.813443 CAGCCTCTATACATTGCCAAGT 58.187 45.455 0.00 0.00 0.00 3.16
81 82 2.551459 GCAGCCTCTATACATTGCCAAG 59.449 50.000 0.00 0.00 0.00 3.61
82 83 2.575532 GCAGCCTCTATACATTGCCAA 58.424 47.619 0.00 0.00 0.00 4.52
83 84 2.260844 GCAGCCTCTATACATTGCCA 57.739 50.000 0.00 0.00 0.00 4.92
84 85 1.528129 GGCAGCCTCTATACATTGCC 58.472 55.000 3.29 0.00 43.54 4.52
85 86 2.421619 GAGGCAGCCTCTATACATTGC 58.578 52.381 31.54 3.89 46.41 3.56
96 97 1.144913 CTCTCCTACTAGAGGCAGCCT 59.855 57.143 16.12 16.12 46.25 4.58
97 98 1.144093 TCTCTCCTACTAGAGGCAGCC 59.856 57.143 1.84 1.84 46.25 4.85
98 99 2.105821 TCTCTCTCCTACTAGAGGCAGC 59.894 54.545 0.00 0.00 46.25 5.25
99 100 4.389374 CTTCTCTCTCCTACTAGAGGCAG 58.611 52.174 0.00 0.00 46.25 4.85
100 101 3.137544 CCTTCTCTCTCCTACTAGAGGCA 59.862 52.174 0.00 0.00 46.25 4.75
101 102 3.751518 CCTTCTCTCTCCTACTAGAGGC 58.248 54.545 0.00 0.00 46.25 4.70
103 104 4.706842 AGCCTTCTCTCTCCTACTAGAG 57.293 50.000 0.00 0.00 43.72 2.43
104 105 5.906495 TCTAAGCCTTCTCTCTCCTACTAGA 59.094 44.000 0.00 0.00 0.00 2.43
105 106 6.182507 TCTAAGCCTTCTCTCTCCTACTAG 57.817 45.833 0.00 0.00 0.00 2.57
106 107 5.072600 CCTCTAAGCCTTCTCTCTCCTACTA 59.927 48.000 0.00 0.00 0.00 1.82
107 108 4.141251 CCTCTAAGCCTTCTCTCTCCTACT 60.141 50.000 0.00 0.00 0.00 2.57
108 109 4.142038 CCTCTAAGCCTTCTCTCTCCTAC 58.858 52.174 0.00 0.00 0.00 3.18
109 110 3.435890 GCCTCTAAGCCTTCTCTCTCCTA 60.436 52.174 0.00 0.00 0.00 2.94
110 111 2.689723 GCCTCTAAGCCTTCTCTCTCCT 60.690 54.545 0.00 0.00 0.00 3.69
111 112 1.686587 GCCTCTAAGCCTTCTCTCTCC 59.313 57.143 0.00 0.00 0.00 3.71
112 113 2.383855 TGCCTCTAAGCCTTCTCTCTC 58.616 52.381 0.00 0.00 0.00 3.20
113 114 2.541233 TGCCTCTAAGCCTTCTCTCT 57.459 50.000 0.00 0.00 0.00 3.10
114 115 3.639094 TGTATGCCTCTAAGCCTTCTCTC 59.361 47.826 0.00 0.00 0.00 3.20
115 116 3.386402 GTGTATGCCTCTAAGCCTTCTCT 59.614 47.826 0.00 0.00 0.00 3.10
116 117 3.493524 GGTGTATGCCTCTAAGCCTTCTC 60.494 52.174 0.00 0.00 0.00 2.87
117 118 2.436173 GGTGTATGCCTCTAAGCCTTCT 59.564 50.000 0.00 0.00 0.00 2.85
118 119 2.170607 TGGTGTATGCCTCTAAGCCTTC 59.829 50.000 0.00 0.00 0.00 3.46
119 120 2.196595 TGGTGTATGCCTCTAAGCCTT 58.803 47.619 0.00 0.00 0.00 4.35
120 121 1.879575 TGGTGTATGCCTCTAAGCCT 58.120 50.000 0.00 0.00 0.00 4.58
121 122 2.498167 CATGGTGTATGCCTCTAAGCC 58.502 52.381 0.00 0.00 0.00 4.35
122 123 2.498167 CCATGGTGTATGCCTCTAAGC 58.502 52.381 2.57 0.00 35.37 3.09
123 124 2.105477 AGCCATGGTGTATGCCTCTAAG 59.895 50.000 14.67 0.00 35.37 2.18
124 125 2.126882 AGCCATGGTGTATGCCTCTAA 58.873 47.619 14.67 0.00 35.37 2.10
125 126 1.417517 CAGCCATGGTGTATGCCTCTA 59.582 52.381 14.67 0.00 35.37 2.43
126 127 0.182061 CAGCCATGGTGTATGCCTCT 59.818 55.000 14.67 0.00 35.37 3.69
127 128 1.450531 GCAGCCATGGTGTATGCCTC 61.451 60.000 14.67 0.00 35.37 4.70
128 129 1.454479 GCAGCCATGGTGTATGCCT 60.454 57.895 14.67 0.00 35.37 4.75
129 130 1.450531 GAGCAGCCATGGTGTATGCC 61.451 60.000 21.81 13.73 37.25 4.40
130 131 0.465097 AGAGCAGCCATGGTGTATGC 60.465 55.000 14.67 17.63 37.25 3.14
131 132 1.134310 TGAGAGCAGCCATGGTGTATG 60.134 52.381 14.67 8.66 37.25 2.39
132 133 1.206878 TGAGAGCAGCCATGGTGTAT 58.793 50.000 14.67 4.07 37.25 2.29
133 134 1.134310 CATGAGAGCAGCCATGGTGTA 60.134 52.381 14.67 0.00 37.25 2.90
134 135 0.393944 CATGAGAGCAGCCATGGTGT 60.394 55.000 14.67 0.00 37.25 4.16
135 136 0.393944 ACATGAGAGCAGCCATGGTG 60.394 55.000 14.67 11.47 43.16 4.17
136 137 0.393944 CACATGAGAGCAGCCATGGT 60.394 55.000 14.67 0.00 43.16 3.55
137 138 1.725557 GCACATGAGAGCAGCCATGG 61.726 60.000 7.63 7.63 43.16 3.66
138 139 0.748367 AGCACATGAGAGCAGCCATG 60.748 55.000 0.00 8.20 44.12 3.66
139 140 0.034380 AAGCACATGAGAGCAGCCAT 60.034 50.000 0.00 0.00 33.43 4.40
140 141 0.251033 AAAGCACATGAGAGCAGCCA 60.251 50.000 0.00 0.00 33.43 4.75
141 142 0.886563 AAAAGCACATGAGAGCAGCC 59.113 50.000 0.00 0.00 33.43 4.85
142 143 2.719426 AAAAAGCACATGAGAGCAGC 57.281 45.000 0.00 0.00 33.43 5.25
143 144 5.814764 ATCTAAAAAGCACATGAGAGCAG 57.185 39.130 0.00 0.00 33.43 4.24
144 145 5.474532 ACAATCTAAAAAGCACATGAGAGCA 59.525 36.000 0.00 0.00 33.43 4.26
145 146 5.947443 ACAATCTAAAAAGCACATGAGAGC 58.053 37.500 0.00 0.00 0.00 4.09
146 147 7.327761 CCAAACAATCTAAAAAGCACATGAGAG 59.672 37.037 0.00 0.00 0.00 3.20
147 148 7.147312 CCAAACAATCTAAAAAGCACATGAGA 58.853 34.615 0.00 0.00 0.00 3.27
148 149 6.925165 ACCAAACAATCTAAAAAGCACATGAG 59.075 34.615 0.00 0.00 0.00 2.90
149 150 6.815089 ACCAAACAATCTAAAAAGCACATGA 58.185 32.000 0.00 0.00 0.00 3.07
150 151 7.481275 AACCAAACAATCTAAAAAGCACATG 57.519 32.000 0.00 0.00 0.00 3.21
151 152 7.768120 TCAAACCAAACAATCTAAAAAGCACAT 59.232 29.630 0.00 0.00 0.00 3.21
152 153 7.099764 TCAAACCAAACAATCTAAAAAGCACA 58.900 30.769 0.00 0.00 0.00 4.57
153 154 7.532682 TCAAACCAAACAATCTAAAAAGCAC 57.467 32.000 0.00 0.00 0.00 4.40
154 155 8.610896 CAATCAAACCAAACAATCTAAAAAGCA 58.389 29.630 0.00 0.00 0.00 3.91
155 156 7.587392 GCAATCAAACCAAACAATCTAAAAAGC 59.413 33.333 0.00 0.00 0.00 3.51
156 157 8.069574 GGCAATCAAACCAAACAATCTAAAAAG 58.930 33.333 0.00 0.00 0.00 2.27
157 158 7.554118 TGGCAATCAAACCAAACAATCTAAAAA 59.446 29.630 0.00 0.00 31.46 1.94
158 159 7.011857 GTGGCAATCAAACCAAACAATCTAAAA 59.988 33.333 0.00 0.00 37.79 1.52
159 160 6.481644 GTGGCAATCAAACCAAACAATCTAAA 59.518 34.615 0.00 0.00 37.79 1.85
160 161 5.988561 GTGGCAATCAAACCAAACAATCTAA 59.011 36.000 0.00 0.00 37.79 2.10
161 162 5.510520 GGTGGCAATCAAACCAAACAATCTA 60.511 40.000 0.00 0.00 37.79 1.98
162 163 4.379652 GTGGCAATCAAACCAAACAATCT 58.620 39.130 0.00 0.00 37.79 2.40
163 164 3.498018 GGTGGCAATCAAACCAAACAATC 59.502 43.478 0.00 0.00 37.79 2.67
164 165 3.136260 AGGTGGCAATCAAACCAAACAAT 59.864 39.130 0.00 0.00 37.79 2.71
165 166 2.503356 AGGTGGCAATCAAACCAAACAA 59.497 40.909 0.00 0.00 37.79 2.83
166 167 2.114616 AGGTGGCAATCAAACCAAACA 58.885 42.857 0.00 0.00 37.79 2.83
167 168 2.908688 AGGTGGCAATCAAACCAAAC 57.091 45.000 0.00 0.00 37.79 2.93
168 169 3.260380 CCATAGGTGGCAATCAAACCAAA 59.740 43.478 0.00 0.00 39.01 3.28
169 170 2.830923 CCATAGGTGGCAATCAAACCAA 59.169 45.455 0.00 0.00 39.01 3.67
170 171 2.455557 CCATAGGTGGCAATCAAACCA 58.544 47.619 0.00 0.00 39.01 3.67
171 172 1.756538 CCCATAGGTGGCAATCAAACC 59.243 52.381 0.00 0.00 44.62 3.27
181 182 1.136329 ATAGGCTGGCCCATAGGTGG 61.136 60.000 8.11 0.00 45.61 4.61
182 183 0.326264 GATAGGCTGGCCCATAGGTG 59.674 60.000 8.11 0.00 36.58 4.00
183 184 0.104462 TGATAGGCTGGCCCATAGGT 60.104 55.000 8.11 0.00 36.58 3.08
184 185 0.326264 GTGATAGGCTGGCCCATAGG 59.674 60.000 8.11 0.00 36.58 2.57
185 186 0.326264 GGTGATAGGCTGGCCCATAG 59.674 60.000 8.11 0.00 36.58 2.23
186 187 1.480212 CGGTGATAGGCTGGCCCATA 61.480 60.000 8.11 0.00 36.58 2.74
187 188 2.822637 CGGTGATAGGCTGGCCCAT 61.823 63.158 8.11 0.00 36.58 4.00
188 189 3.479203 CGGTGATAGGCTGGCCCA 61.479 66.667 8.11 0.00 36.58 5.36
189 190 2.456287 GATCGGTGATAGGCTGGCCC 62.456 65.000 8.11 0.00 36.58 5.80
190 191 1.004440 GATCGGTGATAGGCTGGCC 60.004 63.158 3.00 3.00 0.00 5.36
191 192 1.004440 GGATCGGTGATAGGCTGGC 60.004 63.158 0.00 0.00 0.00 4.85
192 193 0.034059 GTGGATCGGTGATAGGCTGG 59.966 60.000 0.00 0.00 0.00 4.85
193 194 1.043816 AGTGGATCGGTGATAGGCTG 58.956 55.000 0.00 0.00 0.00 4.85
194 195 1.794714 AAGTGGATCGGTGATAGGCT 58.205 50.000 0.00 0.00 0.00 4.58
195 196 2.622064 AAAGTGGATCGGTGATAGGC 57.378 50.000 0.00 0.00 0.00 3.93
196 197 4.665833 TGTAAAGTGGATCGGTGATAGG 57.334 45.455 0.00 0.00 0.00 2.57
197 198 5.293569 GGTTTGTAAAGTGGATCGGTGATAG 59.706 44.000 0.00 0.00 0.00 2.08
198 199 5.180271 GGTTTGTAAAGTGGATCGGTGATA 58.820 41.667 0.00 0.00 0.00 2.15
199 200 4.007659 GGTTTGTAAAGTGGATCGGTGAT 58.992 43.478 0.00 0.00 0.00 3.06
200 201 3.181453 TGGTTTGTAAAGTGGATCGGTGA 60.181 43.478 0.00 0.00 0.00 4.02
201 202 3.142951 TGGTTTGTAAAGTGGATCGGTG 58.857 45.455 0.00 0.00 0.00 4.94
202 203 3.495434 TGGTTTGTAAAGTGGATCGGT 57.505 42.857 0.00 0.00 0.00 4.69
203 204 4.261801 AGATGGTTTGTAAAGTGGATCGG 58.738 43.478 0.00 0.00 0.00 4.18
204 205 5.411361 TGAAGATGGTTTGTAAAGTGGATCG 59.589 40.000 0.00 0.00 0.00 3.69
205 206 6.817765 TGAAGATGGTTTGTAAAGTGGATC 57.182 37.500 0.00 0.00 0.00 3.36
206 207 6.947733 TGATGAAGATGGTTTGTAAAGTGGAT 59.052 34.615 0.00 0.00 0.00 3.41
207 208 6.303054 TGATGAAGATGGTTTGTAAAGTGGA 58.697 36.000 0.00 0.00 0.00 4.02
208 209 6.573664 TGATGAAGATGGTTTGTAAAGTGG 57.426 37.500 0.00 0.00 0.00 4.00
209 210 8.729756 TGTATGATGAAGATGGTTTGTAAAGTG 58.270 33.333 0.00 0.00 0.00 3.16
210 211 8.730680 GTGTATGATGAAGATGGTTTGTAAAGT 58.269 33.333 0.00 0.00 0.00 2.66
211 212 8.729756 TGTGTATGATGAAGATGGTTTGTAAAG 58.270 33.333 0.00 0.00 0.00 1.85
212 213 8.628630 TGTGTATGATGAAGATGGTTTGTAAA 57.371 30.769 0.00 0.00 0.00 2.01
213 214 8.100164 TCTGTGTATGATGAAGATGGTTTGTAA 58.900 33.333 0.00 0.00 0.00 2.41
214 215 7.619965 TCTGTGTATGATGAAGATGGTTTGTA 58.380 34.615 0.00 0.00 0.00 2.41
215 216 6.475504 TCTGTGTATGATGAAGATGGTTTGT 58.524 36.000 0.00 0.00 0.00 2.83
216 217 6.990341 TCTGTGTATGATGAAGATGGTTTG 57.010 37.500 0.00 0.00 0.00 2.93
217 218 7.114754 ACATCTGTGTATGATGAAGATGGTTT 58.885 34.615 13.74 0.00 45.49 3.27
218 219 6.656902 ACATCTGTGTATGATGAAGATGGTT 58.343 36.000 13.74 0.00 45.49 3.67
219 220 6.099413 AGACATCTGTGTATGATGAAGATGGT 59.901 38.462 13.74 2.22 45.49 3.55
220 221 6.522946 AGACATCTGTGTATGATGAAGATGG 58.477 40.000 13.74 0.00 45.49 3.51
221 222 7.435305 AGAGACATCTGTGTATGATGAAGATG 58.565 38.462 10.21 8.93 46.25 2.90
222 223 7.600231 AGAGACATCTGTGTATGATGAAGAT 57.400 36.000 10.21 0.00 42.68 2.40
223 224 7.415592 AAGAGACATCTGTGTATGATGAAGA 57.584 36.000 10.21 0.00 42.68 2.87
224 225 8.489990 AAAAGAGACATCTGTGTATGATGAAG 57.510 34.615 10.21 0.00 42.68 3.02
225 226 8.316946 AGAAAAGAGACATCTGTGTATGATGAA 58.683 33.333 10.21 0.00 42.68 2.57
226 227 7.845037 AGAAAAGAGACATCTGTGTATGATGA 58.155 34.615 10.21 0.00 42.68 2.92
227 228 7.980662 AGAGAAAAGAGACATCTGTGTATGATG 59.019 37.037 0.00 0.00 44.79 3.07
228 229 8.076910 AGAGAAAAGAGACATCTGTGTATGAT 57.923 34.615 0.00 0.00 39.09 2.45
229 230 7.473735 AGAGAAAAGAGACATCTGTGTATGA 57.526 36.000 0.00 0.00 39.09 2.15
230 231 8.465999 AGTAGAGAAAAGAGACATCTGTGTATG 58.534 37.037 0.00 0.00 39.09 2.39
231 232 8.465999 CAGTAGAGAAAAGAGACATCTGTGTAT 58.534 37.037 0.00 0.00 39.09 2.29
232 233 7.575909 GCAGTAGAGAAAAGAGACATCTGTGTA 60.576 40.741 0.00 0.00 39.09 2.90
233 234 6.686630 CAGTAGAGAAAAGAGACATCTGTGT 58.313 40.000 0.00 0.00 42.49 3.72
234 235 5.576384 GCAGTAGAGAAAAGAGACATCTGTG 59.424 44.000 0.00 0.00 35.37 3.66
235 236 5.337169 GGCAGTAGAGAAAAGAGACATCTGT 60.337 44.000 0.00 0.00 35.37 3.41
236 237 5.108517 GGCAGTAGAGAAAAGAGACATCTG 58.891 45.833 0.00 0.00 35.37 2.90
237 238 4.142271 CGGCAGTAGAGAAAAGAGACATCT 60.142 45.833 0.00 0.00 37.39 2.90
238 239 4.109050 CGGCAGTAGAGAAAAGAGACATC 58.891 47.826 0.00 0.00 0.00 3.06
239 240 3.118956 CCGGCAGTAGAGAAAAGAGACAT 60.119 47.826 0.00 0.00 0.00 3.06
240 241 2.231478 CCGGCAGTAGAGAAAAGAGACA 59.769 50.000 0.00 0.00 0.00 3.41
241 242 2.882324 CCGGCAGTAGAGAAAAGAGAC 58.118 52.381 0.00 0.00 0.00 3.36
242 243 1.204941 GCCGGCAGTAGAGAAAAGAGA 59.795 52.381 24.80 0.00 0.00 3.10
243 244 1.646189 GCCGGCAGTAGAGAAAAGAG 58.354 55.000 24.80 0.00 0.00 2.85
244 245 0.108804 CGCCGGCAGTAGAGAAAAGA 60.109 55.000 28.98 0.00 0.00 2.52
245 246 0.108804 TCGCCGGCAGTAGAGAAAAG 60.109 55.000 28.98 5.10 0.00 2.27
246 247 0.108804 CTCGCCGGCAGTAGAGAAAA 60.109 55.000 28.98 0.00 32.84 2.29
247 248 1.248785 ACTCGCCGGCAGTAGAGAAA 61.249 55.000 28.76 5.09 34.98 2.52
248 249 1.248785 AACTCGCCGGCAGTAGAGAA 61.249 55.000 28.76 5.70 34.98 2.87
249 250 1.248785 AAACTCGCCGGCAGTAGAGA 61.249 55.000 28.76 15.99 34.98 3.10
250 251 1.078759 CAAACTCGCCGGCAGTAGAG 61.079 60.000 28.98 25.33 36.83 2.43
251 252 1.080093 CAAACTCGCCGGCAGTAGA 60.080 57.895 28.98 14.64 0.00 2.59
252 253 2.740714 GCAAACTCGCCGGCAGTAG 61.741 63.158 28.98 21.87 0.00 2.57
253 254 2.740826 GCAAACTCGCCGGCAGTA 60.741 61.111 28.98 10.32 0.00 2.74
261 262 0.737715 ATCTCTGACGGCAAACTCGC 60.738 55.000 0.00 0.00 0.00 5.03
262 263 2.561733 TATCTCTGACGGCAAACTCG 57.438 50.000 0.00 0.00 0.00 4.18
263 264 3.557595 CCATTATCTCTGACGGCAAACTC 59.442 47.826 0.00 0.00 0.00 3.01
264 265 3.535561 CCATTATCTCTGACGGCAAACT 58.464 45.455 0.00 0.00 0.00 2.66
265 266 2.032178 GCCATTATCTCTGACGGCAAAC 59.968 50.000 0.00 0.00 39.38 2.93
266 267 2.288666 GCCATTATCTCTGACGGCAAA 58.711 47.619 0.00 0.00 39.38 3.68
267 268 1.806247 CGCCATTATCTCTGACGGCAA 60.806 52.381 0.00 0.00 39.56 4.52
268 269 0.249447 CGCCATTATCTCTGACGGCA 60.249 55.000 0.00 0.00 39.56 5.69
269 270 0.249489 ACGCCATTATCTCTGACGGC 60.249 55.000 0.00 0.00 36.16 5.68
270 271 1.202417 ACACGCCATTATCTCTGACGG 60.202 52.381 0.00 0.00 0.00 4.79
271 272 2.120232 GACACGCCATTATCTCTGACG 58.880 52.381 0.00 0.00 0.00 4.35
272 273 2.860735 GTGACACGCCATTATCTCTGAC 59.139 50.000 0.00 0.00 0.00 3.51
273 274 2.479560 CGTGACACGCCATTATCTCTGA 60.480 50.000 16.06 0.00 33.65 3.27
274 275 1.854743 CGTGACACGCCATTATCTCTG 59.145 52.381 16.06 0.00 33.65 3.35
275 276 1.749063 TCGTGACACGCCATTATCTCT 59.251 47.619 22.99 0.00 42.21 3.10
276 277 1.852895 GTCGTGACACGCCATTATCTC 59.147 52.381 22.99 1.65 42.21 2.75
277 278 1.476891 AGTCGTGACACGCCATTATCT 59.523 47.619 22.99 8.96 42.21 1.98
278 279 1.922570 AGTCGTGACACGCCATTATC 58.077 50.000 22.99 7.05 42.21 1.75
279 280 2.380084 AAGTCGTGACACGCCATTAT 57.620 45.000 22.99 3.23 42.21 1.28
280 281 3.300852 TTAAGTCGTGACACGCCATTA 57.699 42.857 22.99 16.64 42.21 1.90
281 282 2.157834 TTAAGTCGTGACACGCCATT 57.842 45.000 22.99 17.56 42.21 3.16
282 283 2.380084 ATTAAGTCGTGACACGCCAT 57.620 45.000 22.99 7.61 42.21 4.40
283 284 1.795872 CAATTAAGTCGTGACACGCCA 59.204 47.619 22.99 4.03 42.21 5.69
284 285 1.796459 ACAATTAAGTCGTGACACGCC 59.204 47.619 22.99 12.51 42.21 5.68
285 286 2.159881 GGACAATTAAGTCGTGACACGC 60.160 50.000 22.99 17.10 42.21 5.34
286 287 2.410730 GGGACAATTAAGTCGTGACACG 59.589 50.000 21.88 21.88 44.19 4.49
287 288 3.660865 AGGGACAATTAAGTCGTGACAC 58.339 45.455 2.44 0.00 39.42 3.67
288 289 4.062293 CAAGGGACAATTAAGTCGTGACA 58.938 43.478 2.44 0.00 39.42 3.58
289 290 4.062991 ACAAGGGACAATTAAGTCGTGAC 58.937 43.478 0.00 0.00 39.42 3.67
290 291 4.345859 ACAAGGGACAATTAAGTCGTGA 57.654 40.909 0.00 0.00 39.42 4.35
291 292 4.992319 TGTACAAGGGACAATTAAGTCGTG 59.008 41.667 0.00 0.00 39.42 4.35
292 293 5.217978 TGTACAAGGGACAATTAAGTCGT 57.782 39.130 0.00 0.00 39.42 4.34
293 294 5.235516 ACTGTACAAGGGACAATTAAGTCG 58.764 41.667 0.00 0.00 39.42 4.18
294 295 8.038944 TGATACTGTACAAGGGACAATTAAGTC 58.961 37.037 0.00 0.00 37.80 3.01
295 296 7.913789 TGATACTGTACAAGGGACAATTAAGT 58.086 34.615 0.00 0.00 0.00 2.24
296 297 8.964476 ATGATACTGTACAAGGGACAATTAAG 57.036 34.615 0.00 0.00 0.00 1.85
297 298 9.747898 AAATGATACTGTACAAGGGACAATTAA 57.252 29.630 0.00 0.00 0.00 1.40
298 299 9.747898 AAAATGATACTGTACAAGGGACAATTA 57.252 29.630 0.00 0.00 0.00 1.40
299 300 8.522830 CAAAATGATACTGTACAAGGGACAATT 58.477 33.333 0.00 0.00 0.00 2.32
300 301 7.122650 CCAAAATGATACTGTACAAGGGACAAT 59.877 37.037 0.00 0.00 0.00 2.71
301 302 6.432783 CCAAAATGATACTGTACAAGGGACAA 59.567 38.462 0.00 0.00 0.00 3.18
302 303 5.943416 CCAAAATGATACTGTACAAGGGACA 59.057 40.000 0.00 0.00 0.00 4.02
303 304 6.177610 TCCAAAATGATACTGTACAAGGGAC 58.822 40.000 0.00 0.00 0.00 4.46
304 305 6.012858 ACTCCAAAATGATACTGTACAAGGGA 60.013 38.462 0.00 0.00 0.00 4.20
305 306 6.180472 ACTCCAAAATGATACTGTACAAGGG 58.820 40.000 0.00 0.00 0.00 3.95
306 307 6.878923 TGACTCCAAAATGATACTGTACAAGG 59.121 38.462 0.00 0.00 0.00 3.61
307 308 7.905604 TGACTCCAAAATGATACTGTACAAG 57.094 36.000 0.00 0.00 0.00 3.16
308 309 7.882791 ACATGACTCCAAAATGATACTGTACAA 59.117 33.333 0.00 0.00 0.00 2.41
309 310 7.394016 ACATGACTCCAAAATGATACTGTACA 58.606 34.615 0.00 0.00 0.00 2.90
310 311 7.766278 AGACATGACTCCAAAATGATACTGTAC 59.234 37.037 0.00 0.00 0.00 2.90
311 312 7.851228 AGACATGACTCCAAAATGATACTGTA 58.149 34.615 0.00 0.00 0.00 2.74
312 313 6.715280 AGACATGACTCCAAAATGATACTGT 58.285 36.000 0.00 0.00 0.00 3.55
313 314 7.765819 TGTAGACATGACTCCAAAATGATACTG 59.234 37.037 0.00 0.00 0.00 2.74
314 315 7.851228 TGTAGACATGACTCCAAAATGATACT 58.149 34.615 0.00 0.00 0.00 2.12
315 316 8.492673 TTGTAGACATGACTCCAAAATGATAC 57.507 34.615 0.00 0.00 0.00 2.24
316 317 9.685276 ATTTGTAGACATGACTCCAAAATGATA 57.315 29.630 16.88 0.00 31.65 2.15
317 318 8.585471 ATTTGTAGACATGACTCCAAAATGAT 57.415 30.769 16.88 1.85 31.65 2.45
318 319 7.884877 AGATTTGTAGACATGACTCCAAAATGA 59.115 33.333 16.88 0.00 31.65 2.57
319 320 8.048534 AGATTTGTAGACATGACTCCAAAATG 57.951 34.615 16.88 0.00 31.65 2.32
320 321 9.739276 TTAGATTTGTAGACATGACTCCAAAAT 57.261 29.630 16.88 13.28 31.65 1.82
321 322 9.567776 TTTAGATTTGTAGACATGACTCCAAAA 57.432 29.630 16.88 9.93 31.65 2.44
322 323 9.219603 CTTTAGATTTGTAGACATGACTCCAAA 57.780 33.333 15.69 15.69 32.21 3.28
323 324 7.824289 CCTTTAGATTTGTAGACATGACTCCAA 59.176 37.037 0.00 0.00 0.00 3.53
324 325 7.331026 CCTTTAGATTTGTAGACATGACTCCA 58.669 38.462 0.00 0.00 0.00 3.86
325 326 6.763610 CCCTTTAGATTTGTAGACATGACTCC 59.236 42.308 0.00 0.00 0.00 3.85
326 327 6.258947 GCCCTTTAGATTTGTAGACATGACTC 59.741 42.308 0.00 0.00 0.00 3.36
327 328 6.069963 AGCCCTTTAGATTTGTAGACATGACT 60.070 38.462 0.00 0.00 0.00 3.41
328 329 6.116126 AGCCCTTTAGATTTGTAGACATGAC 58.884 40.000 0.00 0.00 0.00 3.06
329 330 6.313519 AGCCCTTTAGATTTGTAGACATGA 57.686 37.500 0.00 0.00 0.00 3.07
330 331 6.183360 CCAAGCCCTTTAGATTTGTAGACATG 60.183 42.308 0.00 0.00 0.00 3.21
331 332 5.888161 CCAAGCCCTTTAGATTTGTAGACAT 59.112 40.000 0.00 0.00 0.00 3.06
332 333 5.222048 ACCAAGCCCTTTAGATTTGTAGACA 60.222 40.000 0.00 0.00 0.00 3.41
333 334 5.254115 ACCAAGCCCTTTAGATTTGTAGAC 58.746 41.667 0.00 0.00 0.00 2.59
334 335 5.514500 ACCAAGCCCTTTAGATTTGTAGA 57.486 39.130 0.00 0.00 0.00 2.59
335 336 5.476945 ACAACCAAGCCCTTTAGATTTGTAG 59.523 40.000 0.00 0.00 0.00 2.74
336 337 5.390387 ACAACCAAGCCCTTTAGATTTGTA 58.610 37.500 0.00 0.00 0.00 2.41
337 338 4.223144 ACAACCAAGCCCTTTAGATTTGT 58.777 39.130 0.00 0.00 0.00 2.83
338 339 4.871933 ACAACCAAGCCCTTTAGATTTG 57.128 40.909 0.00 0.00 0.00 2.32
339 340 7.553504 AAATACAACCAAGCCCTTTAGATTT 57.446 32.000 0.00 0.00 0.00 2.17
340 341 7.553504 AAAATACAACCAAGCCCTTTAGATT 57.446 32.000 0.00 0.00 0.00 2.40
341 342 7.553504 AAAAATACAACCAAGCCCTTTAGAT 57.446 32.000 0.00 0.00 0.00 1.98
342 343 6.987403 AAAAATACAACCAAGCCCTTTAGA 57.013 33.333 0.00 0.00 0.00 2.10
372 373 1.439644 GCGGACAGTTGGGCAAAAA 59.560 52.632 0.00 0.00 0.00 1.94
373 374 2.494530 GGCGGACAGTTGGGCAAAA 61.495 57.895 0.00 0.00 0.00 2.44
374 375 2.909965 GGCGGACAGTTGGGCAAA 60.910 61.111 0.00 0.00 0.00 3.68
375 376 3.842925 GAGGCGGACAGTTGGGCAA 62.843 63.158 1.95 0.00 0.00 4.52
376 377 4.329545 GAGGCGGACAGTTGGGCA 62.330 66.667 1.95 0.00 0.00 5.36
378 379 3.636231 TGGAGGCGGACAGTTGGG 61.636 66.667 0.00 0.00 0.00 4.12
379 380 2.358737 GTGGAGGCGGACAGTTGG 60.359 66.667 0.00 0.00 0.00 3.77
380 381 2.507110 ATCGTGGAGGCGGACAGTTG 62.507 60.000 0.00 0.00 0.00 3.16
381 382 2.227089 GATCGTGGAGGCGGACAGTT 62.227 60.000 0.00 0.00 0.00 3.16
382 383 2.680352 ATCGTGGAGGCGGACAGT 60.680 61.111 0.00 0.00 0.00 3.55
383 384 2.105128 GATCGTGGAGGCGGACAG 59.895 66.667 0.00 0.00 0.00 3.51
384 385 3.458163 GGATCGTGGAGGCGGACA 61.458 66.667 0.00 0.00 0.00 4.02
385 386 3.458163 TGGATCGTGGAGGCGGAC 61.458 66.667 0.00 0.00 0.00 4.79
386 387 3.458163 GTGGATCGTGGAGGCGGA 61.458 66.667 0.00 0.00 0.00 5.54
387 388 3.770040 TGTGGATCGTGGAGGCGG 61.770 66.667 0.00 0.00 0.00 6.13
388 389 2.509336 GTGTGGATCGTGGAGGCG 60.509 66.667 0.00 0.00 0.00 5.52
389 390 1.741770 GTGTGTGGATCGTGGAGGC 60.742 63.158 0.00 0.00 0.00 4.70
390 391 0.108615 GAGTGTGTGGATCGTGGAGG 60.109 60.000 0.00 0.00 0.00 4.30
391 392 0.108615 GGAGTGTGTGGATCGTGGAG 60.109 60.000 0.00 0.00 0.00 3.86
392 393 0.541998 AGGAGTGTGTGGATCGTGGA 60.542 55.000 0.00 0.00 0.00 4.02
393 394 0.390340 CAGGAGTGTGTGGATCGTGG 60.390 60.000 0.00 0.00 0.00 4.94
394 395 0.603065 TCAGGAGTGTGTGGATCGTG 59.397 55.000 0.00 0.00 0.00 4.35
395 396 1.478510 GATCAGGAGTGTGTGGATCGT 59.521 52.381 0.00 0.00 0.00 3.73
396 397 1.478105 TGATCAGGAGTGTGTGGATCG 59.522 52.381 0.00 0.00 37.71 3.69
397 398 3.834489 ATGATCAGGAGTGTGTGGATC 57.166 47.619 0.09 0.00 35.95 3.36
398 399 4.550669 TCTATGATCAGGAGTGTGTGGAT 58.449 43.478 0.09 0.00 0.00 3.41
399 400 3.981212 TCTATGATCAGGAGTGTGTGGA 58.019 45.455 0.09 0.00 0.00 4.02
400 401 4.743057 TTCTATGATCAGGAGTGTGTGG 57.257 45.455 0.09 0.00 0.00 4.17
401 402 5.482006 TGTTTCTATGATCAGGAGTGTGTG 58.518 41.667 0.09 0.00 0.00 3.82
402 403 5.247110 ACTGTTTCTATGATCAGGAGTGTGT 59.753 40.000 0.09 0.00 32.92 3.72
403 404 5.728471 ACTGTTTCTATGATCAGGAGTGTG 58.272 41.667 0.09 0.00 32.92 3.82
404 405 5.481824 TGACTGTTTCTATGATCAGGAGTGT 59.518 40.000 0.09 0.79 32.92 3.55
405 406 5.970592 TGACTGTTTCTATGATCAGGAGTG 58.029 41.667 0.09 0.00 32.92 3.51
406 407 6.611613 TTGACTGTTTCTATGATCAGGAGT 57.388 37.500 0.09 0.00 32.92 3.85
407 408 6.875726 TGTTTGACTGTTTCTATGATCAGGAG 59.124 38.462 0.09 1.04 32.92 3.69
408 409 6.768483 TGTTTGACTGTTTCTATGATCAGGA 58.232 36.000 0.09 0.00 32.92 3.86
409 410 6.652481 ACTGTTTGACTGTTTCTATGATCAGG 59.348 38.462 0.09 0.00 32.92 3.86
410 411 7.664082 ACTGTTTGACTGTTTCTATGATCAG 57.336 36.000 0.09 0.00 0.00 2.90
411 412 9.725019 AATACTGTTTGACTGTTTCTATGATCA 57.275 29.630 0.00 0.00 32.45 2.92
412 413 9.979270 CAATACTGTTTGACTGTTTCTATGATC 57.021 33.333 0.00 0.00 32.45 2.92
413 414 8.950210 CCAATACTGTTTGACTGTTTCTATGAT 58.050 33.333 0.00 0.00 32.45 2.45
414 415 7.936847 ACCAATACTGTTTGACTGTTTCTATGA 59.063 33.333 0.00 0.00 32.45 2.15
415 416 8.099364 ACCAATACTGTTTGACTGTTTCTATG 57.901 34.615 0.00 0.00 32.45 2.23
416 417 9.959721 ATACCAATACTGTTTGACTGTTTCTAT 57.040 29.630 0.00 0.00 32.45 1.98
417 418 9.787435 AATACCAATACTGTTTGACTGTTTCTA 57.213 29.630 0.00 0.00 32.45 2.10
418 419 8.567948 CAATACCAATACTGTTTGACTGTTTCT 58.432 33.333 0.00 0.00 32.45 2.52
419 420 7.326063 GCAATACCAATACTGTTTGACTGTTTC 59.674 37.037 0.00 0.00 32.45 2.78
420 421 7.145323 GCAATACCAATACTGTTTGACTGTTT 58.855 34.615 0.00 0.00 32.45 2.83
421 422 6.264292 TGCAATACCAATACTGTTTGACTGTT 59.736 34.615 0.00 0.00 32.45 3.16
422 423 5.767665 TGCAATACCAATACTGTTTGACTGT 59.232 36.000 0.00 0.00 34.59 3.55
423 424 6.086222 GTGCAATACCAATACTGTTTGACTG 58.914 40.000 0.00 0.00 0.00 3.51
424 425 5.767665 TGTGCAATACCAATACTGTTTGACT 59.232 36.000 0.00 0.00 0.00 3.41
425 426 5.856455 GTGTGCAATACCAATACTGTTTGAC 59.144 40.000 0.00 0.00 0.00 3.18
426 427 5.767665 AGTGTGCAATACCAATACTGTTTGA 59.232 36.000 0.00 0.00 0.00 2.69
427 428 6.012658 AGTGTGCAATACCAATACTGTTTG 57.987 37.500 0.00 0.00 0.00 2.93
428 429 5.106712 CGAGTGTGCAATACCAATACTGTTT 60.107 40.000 0.00 0.00 0.00 2.83
429 430 4.391830 CGAGTGTGCAATACCAATACTGTT 59.608 41.667 0.00 0.00 0.00 3.16
430 431 3.932710 CGAGTGTGCAATACCAATACTGT 59.067 43.478 0.00 0.00 0.00 3.55
431 432 3.309682 CCGAGTGTGCAATACCAATACTG 59.690 47.826 0.00 0.00 0.00 2.74
432 433 3.531538 CCGAGTGTGCAATACCAATACT 58.468 45.455 0.00 0.00 0.00 2.12
433 434 2.612212 CCCGAGTGTGCAATACCAATAC 59.388 50.000 0.00 0.00 0.00 1.89
434 435 2.912771 CCCGAGTGTGCAATACCAATA 58.087 47.619 0.00 0.00 0.00 1.90
435 436 1.750193 CCCGAGTGTGCAATACCAAT 58.250 50.000 0.00 0.00 0.00 3.16
436 437 0.958382 GCCCGAGTGTGCAATACCAA 60.958 55.000 0.00 0.00 0.00 3.67
437 438 1.376683 GCCCGAGTGTGCAATACCA 60.377 57.895 0.00 0.00 0.00 3.25
438 439 0.748005 ATGCCCGAGTGTGCAATACC 60.748 55.000 0.00 0.00 41.50 2.73
439 440 1.094785 AATGCCCGAGTGTGCAATAC 58.905 50.000 0.00 0.00 41.50 1.89
440 441 1.093972 CAATGCCCGAGTGTGCAATA 58.906 50.000 0.00 0.00 41.50 1.90
441 442 1.885157 CAATGCCCGAGTGTGCAAT 59.115 52.632 0.00 0.00 41.50 3.56
442 443 2.918345 GCAATGCCCGAGTGTGCAA 61.918 57.895 0.00 0.00 41.50 4.08
443 444 3.364441 GCAATGCCCGAGTGTGCA 61.364 61.111 0.00 0.00 42.52 4.57
515 518 2.742053 TCTCGCTAATTTCTGTTGCCAC 59.258 45.455 0.00 0.00 0.00 5.01
560 563 2.644299 AGTGAACCACCATGAGATCCAA 59.356 45.455 0.00 0.00 34.49 3.53
656 664 4.545706 CGGCGGCATTGCTCCCTA 62.546 66.667 10.53 0.00 34.52 3.53
763 804 3.612681 CACACTCCCGACCGTGGT 61.613 66.667 0.00 0.00 35.51 4.16
834 875 1.272480 GGGGTATTTCAAGGTGCCAGT 60.272 52.381 0.00 0.00 0.00 4.00
836 877 0.322997 CGGGGTATTTCAAGGTGCCA 60.323 55.000 0.00 0.00 0.00 4.92
891 932 3.251043 GAAGAGGAGAAGCGCGCG 61.251 66.667 28.44 28.44 0.00 6.86
892 933 1.876263 GAGAAGAGGAGAAGCGCGC 60.876 63.158 26.66 26.66 0.00 6.86
893 934 1.226831 GGAGAAGAGGAGAAGCGCG 60.227 63.158 0.00 0.00 0.00 6.86
894 935 1.142965 GGGAGAAGAGGAGAAGCGC 59.857 63.158 0.00 0.00 0.00 5.92
895 936 1.819905 GGGGAGAAGAGGAGAAGCG 59.180 63.158 0.00 0.00 0.00 4.68
1320 6405 2.805353 CGGAGCAGGACGACGTTG 60.805 66.667 0.13 0.00 0.00 4.10
1532 8079 9.897744 CAAGAAGCAATTTGAGAGTTACAATTA 57.102 29.630 0.00 0.00 0.00 1.40
1533 8080 8.632679 TCAAGAAGCAATTTGAGAGTTACAATT 58.367 29.630 0.00 0.00 0.00 2.32
1534 8081 8.169977 TCAAGAAGCAATTTGAGAGTTACAAT 57.830 30.769 0.00 0.00 0.00 2.71
1535 8082 7.566760 TCAAGAAGCAATTTGAGAGTTACAA 57.433 32.000 0.00 0.00 0.00 2.41
1536 8083 7.566760 TTCAAGAAGCAATTTGAGAGTTACA 57.433 32.000 0.00 0.00 35.01 2.41
1537 8084 8.292448 TGATTCAAGAAGCAATTTGAGAGTTAC 58.708 33.333 0.00 0.00 33.35 2.50
1577 8131 1.069978 CAATTCGCAACCCCCAAAACT 59.930 47.619 0.00 0.00 0.00 2.66
1702 8284 1.770110 TGGGGGTCTGCAGTTGAGT 60.770 57.895 14.67 0.00 0.00 3.41
1907 9809 1.587933 GAGGTCGAAGGACTGACGCT 61.588 60.000 0.00 0.00 42.97 5.07
1919 9821 0.179181 GACGCACATTACGAGGTCGA 60.179 55.000 6.35 0.00 43.02 4.20
2324 10227 0.108585 AGACCACAACAGTTGCCGAT 59.891 50.000 13.56 0.00 0.00 4.18
2339 10242 8.035394 TCATCTTTCACACTTATCTACAAGACC 58.965 37.037 0.00 0.00 0.00 3.85
2412 11628 6.352016 AGGTACTGCATTATCTGAATCGAT 57.648 37.500 0.00 0.00 37.18 3.59
2476 11692 8.665685 ACTTCTATAACTTTCAATGGCTTTACG 58.334 33.333 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.