Multiple sequence alignment - TraesCS7B01G016000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G016000 chr7B 100.000 1684 0 0 973 2656 13329716 13328033 0.000000e+00 3110
1 TraesCS7B01G016000 chr7B 100.000 691 0 0 1 691 13330688 13329998 0.000000e+00 1277
2 TraesCS7B01G016000 chr7B 90.883 691 41 13 973 1650 16135927 16136608 0.000000e+00 907
3 TraesCS7B01G016000 chr7B 96.209 422 16 0 1115 1536 14980784 14981205 0.000000e+00 691
4 TraesCS7B01G016000 chr7B 89.219 269 15 8 2388 2645 16137105 16137370 9.170000e-85 324
5 TraesCS7B01G016000 chr7B 94.313 211 8 1 1720 1926 16136607 16136817 1.190000e-83 320
6 TraesCS7B01G016000 chr7B 96.721 183 5 1 2063 2245 16136882 16137063 1.190000e-78 303
7 TraesCS7B01G016000 chr7B 86.017 236 17 11 463 691 16135693 16135919 3.420000e-59 239
8 TraesCS7B01G016000 chr7B 83.744 203 23 5 161 354 466278456 466278255 1.620000e-42 183
9 TraesCS7B01G016000 chr7B 76.579 380 57 15 7 354 535860267 535859888 2.100000e-41 180
10 TraesCS7B01G016000 chr7B 97.561 82 2 0 1939 2020 16136804 16136885 9.910000e-30 141
11 TraesCS7B01G016000 chr7A 91.184 828 42 18 973 1777 76954294 76953475 0.000000e+00 1096
12 TraesCS7B01G016000 chr7A 79.292 367 53 15 1 354 76972696 76972340 4.420000e-58 235
13 TraesCS7B01G016000 chr7A 79.063 363 59 9 1 354 651204909 651204555 1.590000e-57 233
14 TraesCS7B01G016000 chr7A 84.375 192 15 7 466 656 76954489 76954312 9.770000e-40 174
15 TraesCS7B01G016000 chr7A 92.553 94 5 2 2305 2396 581850907 581851000 1.660000e-27 134
16 TraesCS7B01G016000 chr7D 87.201 961 81 16 982 1922 70905451 70904513 0.000000e+00 1055
17 TraesCS7B01G016000 chr7D 89.209 278 17 8 2388 2656 70904180 70903907 4.240000e-88 335
18 TraesCS7B01G016000 chr7D 88.525 244 20 6 2074 2311 70904419 70904178 3.350000e-74 289
19 TraesCS7B01G016000 chr7D 77.546 383 56 10 1 354 446508394 446508775 1.250000e-48 204
20 TraesCS7B01G016000 chr7D 76.842 380 59 14 1 354 117687899 117687523 1.260000e-43 187
21 TraesCS7B01G016000 chr7D 84.729 203 12 8 428 623 70905926 70905736 4.510000e-43 185
22 TraesCS7B01G016000 chr4B 88.717 709 54 22 973 1675 512335370 512334682 0.000000e+00 843
23 TraesCS7B01G016000 chr4D 85.624 793 88 19 995 1777 415583846 415583070 0.000000e+00 809
24 TraesCS7B01G016000 chr4A 85.498 793 85 24 973 1757 48275311 48276081 0.000000e+00 800
25 TraesCS7B01G016000 chr4A 95.327 428 20 0 1107 1534 675854927 675855354 0.000000e+00 680
26 TraesCS7B01G016000 chr4A 79.747 237 36 8 112 338 56402971 56402737 7.610000e-36 161
27 TraesCS7B01G016000 chr4A 91.753 97 6 1 2290 2384 736987771 736987867 1.660000e-27 134
28 TraesCS7B01G016000 chr4A 91.753 97 6 1 2290 2384 737015340 737015436 1.660000e-27 134
29 TraesCS7B01G016000 chrUn 97.590 415 10 0 1123 1537 84317792 84317378 0.000000e+00 712
30 TraesCS7B01G016000 chr5D 79.310 377 55 13 1 354 41889603 41889979 2.640000e-60 243
31 TraesCS7B01G016000 chr5D 94.253 87 4 1 2305 2390 446918170 446918256 5.970000e-27 132
32 TraesCS7B01G016000 chr5D 93.258 89 5 1 2306 2393 532592460 532592548 2.150000e-26 130
33 TraesCS7B01G016000 chr2A 78.415 366 63 12 1 355 726098317 726098677 9.570000e-55 224
34 TraesCS7B01G016000 chr2A 77.922 385 54 10 1 354 529947288 529946904 7.450000e-51 211
35 TraesCS7B01G016000 chr2A 90.083 121 12 0 158 278 1264800 1264680 9.840000e-35 158
36 TraesCS7B01G016000 chr2A 92.708 96 5 2 2297 2390 539325568 539325663 1.280000e-28 137
37 TraesCS7B01G016000 chr2A 80.263 152 26 2 1 149 192014337 192014187 7.770000e-21 111
38 TraesCS7B01G016000 chr5B 76.309 363 59 21 1 339 390542228 390542587 4.550000e-38 169
39 TraesCS7B01G016000 chr1D 86.452 155 14 6 1 149 235581533 235581686 2.120000e-36 163
40 TraesCS7B01G016000 chr5A 81.643 207 27 9 158 354 394263489 394263284 7.610000e-36 161
41 TraesCS7B01G016000 chr5A 83.333 144 23 1 2 145 672842482 672842624 5.970000e-27 132
42 TraesCS7B01G016000 chr3A 84.242 165 26 0 158 322 680335184 680335348 7.610000e-36 161
43 TraesCS7B01G016000 chr3A 81.333 150 25 3 1 149 22827849 22827702 4.640000e-23 119
44 TraesCS7B01G016000 chr1A 75.521 384 58 22 1 354 163377398 163377021 3.540000e-34 156
45 TraesCS7B01G016000 chr1A 93.407 91 5 1 2302 2391 209362066 209362156 1.660000e-27 134
46 TraesCS7B01G016000 chr6B 96.341 82 3 0 2306 2387 225872723 225872642 4.610000e-28 135
47 TraesCS7B01G016000 chr2B 93.182 88 6 0 2297 2384 650285642 650285729 2.150000e-26 130
48 TraesCS7B01G016000 chr3B 87.736 106 12 1 1 106 180274241 180274137 3.590000e-24 122


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G016000 chr7B 13328033 13330688 2655 True 2193.500000 3110 100.000000 1 2656 2 chr7B.!!$R3 2655
1 TraesCS7B01G016000 chr7B 16135693 16137370 1677 False 372.333333 907 92.452333 463 2645 6 chr7B.!!$F2 2182
2 TraesCS7B01G016000 chr7A 76953475 76954489 1014 True 635.000000 1096 87.779500 466 1777 2 chr7A.!!$R3 1311
3 TraesCS7B01G016000 chr7D 70903907 70905926 2019 True 466.000000 1055 87.416000 428 2656 4 chr7D.!!$R2 2228
4 TraesCS7B01G016000 chr4B 512334682 512335370 688 True 843.000000 843 88.717000 973 1675 1 chr4B.!!$R1 702
5 TraesCS7B01G016000 chr4D 415583070 415583846 776 True 809.000000 809 85.624000 995 1777 1 chr4D.!!$R1 782
6 TraesCS7B01G016000 chr4A 48275311 48276081 770 False 800.000000 800 85.498000 973 1757 1 chr4A.!!$F1 784

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
338 339 0.033991 AAGAGCAGCGGAGTAGGAGA 60.034 55.0 0.0 0.0 0.0 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1798 1865 0.537143 TCGCAGCAATCAAACAGGGT 60.537 50.0 0.0 0.0 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.679716 AGGATGGCCTGTTGCTCC 59.320 61.111 3.32 0.56 44.90 4.70
24 25 2.825836 GGATGGCCTGTTGCTCCG 60.826 66.667 3.32 0.00 40.92 4.63
25 26 3.512516 GATGGCCTGTTGCTCCGC 61.513 66.667 3.32 0.00 40.92 5.54
29 30 3.512516 GCCTGTTGCTCCGCCATC 61.513 66.667 0.00 0.00 36.87 3.51
30 31 2.270205 CCTGTTGCTCCGCCATCT 59.730 61.111 0.00 0.00 0.00 2.90
31 32 1.817099 CCTGTTGCTCCGCCATCTC 60.817 63.158 0.00 0.00 0.00 2.75
32 33 2.125552 TGTTGCTCCGCCATCTCG 60.126 61.111 0.00 0.00 0.00 4.04
66 67 2.490217 CGAACTCCGCCTCGACAT 59.510 61.111 0.00 0.00 37.23 3.06
67 68 1.586564 CGAACTCCGCCTCGACATC 60.587 63.158 0.00 0.00 37.23 3.06
68 69 1.227002 GAACTCCGCCTCGACATCC 60.227 63.158 0.00 0.00 0.00 3.51
69 70 1.668101 GAACTCCGCCTCGACATCCT 61.668 60.000 0.00 0.00 0.00 3.24
70 71 1.668101 AACTCCGCCTCGACATCCTC 61.668 60.000 0.00 0.00 0.00 3.71
71 72 2.833582 TCCGCCTCGACATCCTCC 60.834 66.667 0.00 0.00 0.00 4.30
72 73 3.147595 CCGCCTCGACATCCTCCA 61.148 66.667 0.00 0.00 0.00 3.86
73 74 2.502492 CCGCCTCGACATCCTCCAT 61.502 63.158 0.00 0.00 0.00 3.41
74 75 1.300465 CGCCTCGACATCCTCCATG 60.300 63.158 0.00 0.00 38.64 3.66
76 77 0.179000 GCCTCGACATCCTCCATGTT 59.821 55.000 0.00 0.00 46.53 2.71
77 78 1.945387 CCTCGACATCCTCCATGTTG 58.055 55.000 0.00 0.00 46.53 3.33
81 82 1.667724 CGACATCCTCCATGTTGAAGC 59.332 52.381 0.00 0.00 46.53 3.86
82 83 2.019984 GACATCCTCCATGTTGAAGCC 58.980 52.381 0.00 0.00 46.53 4.35
83 84 1.341383 ACATCCTCCATGTTGAAGCCC 60.341 52.381 0.00 0.00 43.89 5.19
84 85 0.107017 ATCCTCCATGTTGAAGCCCG 60.107 55.000 0.00 0.00 0.00 6.13
85 86 1.750399 CCTCCATGTTGAAGCCCGG 60.750 63.158 0.00 0.00 0.00 5.73
86 87 1.299648 CTCCATGTTGAAGCCCGGA 59.700 57.895 0.73 0.00 0.00 5.14
87 88 0.745845 CTCCATGTTGAAGCCCGGAG 60.746 60.000 0.73 0.00 34.54 4.63
88 89 1.002134 CCATGTTGAAGCCCGGAGT 60.002 57.895 0.73 0.00 0.00 3.85
89 90 1.026718 CCATGTTGAAGCCCGGAGTC 61.027 60.000 0.73 0.00 0.00 3.36
90 91 1.079127 ATGTTGAAGCCCGGAGTCG 60.079 57.895 0.73 0.00 0.00 4.18
102 103 4.443266 GAGTCGGCGCCAGCTCTT 62.443 66.667 29.22 10.50 44.37 2.85
103 104 4.749310 AGTCGGCGCCAGCTCTTG 62.749 66.667 28.98 8.23 44.37 3.02
115 116 2.976271 GCTCTTGCTCTAGCTGCTC 58.024 57.895 4.91 0.00 42.66 4.26
116 117 0.530431 GCTCTTGCTCTAGCTGCTCC 60.530 60.000 4.91 0.00 42.66 4.70
117 118 0.248990 CTCTTGCTCTAGCTGCTCCG 60.249 60.000 4.91 0.00 42.66 4.63
118 119 1.882167 CTTGCTCTAGCTGCTCCGC 60.882 63.158 4.91 8.11 42.66 5.54
119 120 3.376935 TTGCTCTAGCTGCTCCGCC 62.377 63.158 4.91 0.00 42.66 6.13
120 121 3.535962 GCTCTAGCTGCTCCGCCT 61.536 66.667 4.91 0.00 38.21 5.52
121 122 2.727544 CTCTAGCTGCTCCGCCTC 59.272 66.667 4.91 0.00 0.00 4.70
122 123 3.192954 CTCTAGCTGCTCCGCCTCG 62.193 68.421 4.91 0.00 0.00 4.63
123 124 3.522731 CTAGCTGCTCCGCCTCGT 61.523 66.667 4.91 0.00 0.00 4.18
124 125 3.477224 CTAGCTGCTCCGCCTCGTC 62.477 68.421 4.91 0.00 0.00 4.20
127 128 4.200283 CTGCTCCGCCTCGTCCTC 62.200 72.222 0.00 0.00 0.00 3.71
130 131 3.213402 CTCCGCCTCGTCCTCCTC 61.213 72.222 0.00 0.00 0.00 3.71
131 132 4.816984 TCCGCCTCGTCCTCCTCC 62.817 72.222 0.00 0.00 0.00 4.30
134 135 4.816984 GCCTCGTCCTCCTCCGGA 62.817 72.222 2.93 2.93 0.00 5.14
142 143 4.452733 CTCCTCCGGACCCGCAAC 62.453 72.222 0.00 0.00 38.24 4.17
145 146 4.452733 CTCCGGACCCGCAACCTC 62.453 72.222 0.00 0.00 38.24 3.85
148 149 4.096003 CGGACCCGCAACCTCCAT 62.096 66.667 0.00 0.00 0.00 3.41
149 150 2.355115 GGACCCGCAACCTCCATT 59.645 61.111 0.00 0.00 0.00 3.16
150 151 2.046285 GGACCCGCAACCTCCATTG 61.046 63.158 0.00 0.00 0.00 2.82
151 152 2.035626 ACCCGCAACCTCCATTGG 59.964 61.111 0.00 0.00 0.00 3.16
152 153 3.451894 CCCGCAACCTCCATTGGC 61.452 66.667 0.00 0.00 0.00 4.52
153 154 2.361610 CCGCAACCTCCATTGGCT 60.362 61.111 0.00 0.00 0.00 4.75
154 155 2.409870 CCGCAACCTCCATTGGCTC 61.410 63.158 0.00 0.00 0.00 4.70
155 156 1.675310 CGCAACCTCCATTGGCTCA 60.675 57.895 0.00 0.00 0.00 4.26
156 157 1.243342 CGCAACCTCCATTGGCTCAA 61.243 55.000 0.00 0.00 0.00 3.02
157 158 0.244721 GCAACCTCCATTGGCTCAAC 59.755 55.000 0.00 0.00 0.00 3.18
158 159 1.915141 CAACCTCCATTGGCTCAACT 58.085 50.000 0.00 0.00 0.00 3.16
159 160 1.815003 CAACCTCCATTGGCTCAACTC 59.185 52.381 0.00 0.00 0.00 3.01
160 161 0.329596 ACCTCCATTGGCTCAACTCC 59.670 55.000 0.00 0.00 0.00 3.85
161 162 0.622665 CCTCCATTGGCTCAACTCCT 59.377 55.000 0.00 0.00 0.00 3.69
162 163 1.407989 CCTCCATTGGCTCAACTCCTC 60.408 57.143 0.00 0.00 0.00 3.71
163 164 0.620556 TCCATTGGCTCAACTCCTCC 59.379 55.000 0.00 0.00 0.00 4.30
164 165 0.622665 CCATTGGCTCAACTCCTCCT 59.377 55.000 0.00 0.00 0.00 3.69
165 166 1.407989 CCATTGGCTCAACTCCTCCTC 60.408 57.143 0.00 0.00 0.00 3.71
166 167 0.915364 ATTGGCTCAACTCCTCCTCC 59.085 55.000 0.00 0.00 0.00 4.30
167 168 0.178891 TTGGCTCAACTCCTCCTCCT 60.179 55.000 0.00 0.00 0.00 3.69
168 169 0.616111 TGGCTCAACTCCTCCTCCTC 60.616 60.000 0.00 0.00 0.00 3.71
169 170 1.334384 GGCTCAACTCCTCCTCCTCC 61.334 65.000 0.00 0.00 0.00 4.30
170 171 1.671901 GCTCAACTCCTCCTCCTCCG 61.672 65.000 0.00 0.00 0.00 4.63
171 172 1.000486 TCAACTCCTCCTCCTCCGG 60.000 63.158 0.00 0.00 0.00 5.14
172 173 2.364448 AACTCCTCCTCCTCCGGC 60.364 66.667 0.00 0.00 0.00 6.13
173 174 2.937285 AACTCCTCCTCCTCCGGCT 61.937 63.158 0.00 0.00 0.00 5.52
174 175 2.520741 CTCCTCCTCCTCCGGCTC 60.521 72.222 0.00 0.00 0.00 4.70
175 176 4.144727 TCCTCCTCCTCCGGCTCC 62.145 72.222 0.00 0.00 0.00 4.70
203 204 4.373116 GAGGCAACCCGACAGCGA 62.373 66.667 0.00 0.00 37.06 4.93
204 205 3.665675 GAGGCAACCCGACAGCGAT 62.666 63.158 0.00 0.00 37.06 4.58
205 206 3.499737 GGCAACCCGACAGCGATG 61.500 66.667 0.00 0.00 40.82 3.84
206 207 4.166011 GCAACCCGACAGCGATGC 62.166 66.667 0.00 0.00 40.82 3.91
207 208 3.853330 CAACCCGACAGCGATGCG 61.853 66.667 0.00 5.47 40.82 4.73
230 231 3.842923 CGTGCCTCGCCTGGATCT 61.843 66.667 0.00 0.00 0.00 2.75
231 232 2.107953 GTGCCTCGCCTGGATCTC 59.892 66.667 0.00 0.00 0.00 2.75
232 233 3.157252 TGCCTCGCCTGGATCTCC 61.157 66.667 0.00 0.00 0.00 3.71
233 234 2.841988 GCCTCGCCTGGATCTCCT 60.842 66.667 0.00 0.00 36.82 3.69
234 235 3.136750 CCTCGCCTGGATCTCCTG 58.863 66.667 0.00 0.00 36.82 3.86
235 236 2.420890 CTCGCCTGGATCTCCTGC 59.579 66.667 0.00 0.08 36.82 4.85
236 237 2.042537 TCGCCTGGATCTCCTGCT 60.043 61.111 0.00 0.00 36.82 4.24
237 238 2.086251 CTCGCCTGGATCTCCTGCTC 62.086 65.000 0.00 0.00 36.82 4.26
238 239 2.420890 GCCTGGATCTCCTGCTCG 59.579 66.667 0.00 0.00 36.82 5.03
239 240 2.130426 GCCTGGATCTCCTGCTCGA 61.130 63.158 0.00 0.00 36.82 4.04
240 241 1.470996 GCCTGGATCTCCTGCTCGAT 61.471 60.000 0.00 0.00 36.82 3.59
241 242 0.602562 CCTGGATCTCCTGCTCGATC 59.397 60.000 0.00 0.00 36.24 3.69
242 243 1.619654 CTGGATCTCCTGCTCGATCT 58.380 55.000 0.00 0.00 36.97 2.75
243 244 1.270274 CTGGATCTCCTGCTCGATCTG 59.730 57.143 0.00 0.00 36.97 2.90
244 245 0.602562 GGATCTCCTGCTCGATCTGG 59.397 60.000 5.88 5.88 36.97 3.86
245 246 0.038343 GATCTCCTGCTCGATCTGGC 60.038 60.000 7.27 0.00 34.59 4.85
246 247 0.758310 ATCTCCTGCTCGATCTGGCA 60.758 55.000 7.27 2.21 36.94 4.92
247 248 1.227205 CTCCTGCTCGATCTGGCAC 60.227 63.158 7.27 0.00 34.57 5.01
248 249 2.202987 CCTGCTCGATCTGGCACC 60.203 66.667 0.00 0.00 34.57 5.01
249 250 2.584418 CTGCTCGATCTGGCACCG 60.584 66.667 5.54 0.00 34.57 4.94
250 251 3.068064 TGCTCGATCTGGCACCGA 61.068 61.111 5.54 2.64 33.23 4.69
251 252 2.583593 GCTCGATCTGGCACCGAC 60.584 66.667 0.00 0.00 0.00 4.79
252 253 2.278206 CTCGATCTGGCACCGACG 60.278 66.667 0.00 0.00 0.00 5.12
253 254 4.492160 TCGATCTGGCACCGACGC 62.492 66.667 0.00 0.00 0.00 5.19
254 255 4.498520 CGATCTGGCACCGACGCT 62.499 66.667 0.00 0.00 0.00 5.07
255 256 2.583593 GATCTGGCACCGACGCTC 60.584 66.667 0.00 0.00 0.00 5.03
256 257 3.069980 GATCTGGCACCGACGCTCT 62.070 63.158 0.00 0.00 0.00 4.09
257 258 3.362399 ATCTGGCACCGACGCTCTG 62.362 63.158 0.00 0.00 0.00 3.35
262 263 3.190849 CACCGACGCTCTGGCATG 61.191 66.667 0.00 0.00 38.60 4.06
263 264 3.381983 ACCGACGCTCTGGCATGA 61.382 61.111 0.00 0.00 38.60 3.07
264 265 2.584418 CCGACGCTCTGGCATGAG 60.584 66.667 0.00 8.90 38.60 2.90
271 272 3.700198 CTCTGGCATGAGCATAGCA 57.300 52.632 0.00 0.00 44.61 3.49
272 273 2.186532 CTCTGGCATGAGCATAGCAT 57.813 50.000 0.00 0.00 44.61 3.79
273 274 3.329929 CTCTGGCATGAGCATAGCATA 57.670 47.619 0.00 0.00 44.61 3.14
274 275 3.875125 CTCTGGCATGAGCATAGCATAT 58.125 45.455 0.00 0.00 44.61 1.78
275 276 3.606687 TCTGGCATGAGCATAGCATATG 58.393 45.455 0.00 0.00 44.61 1.78
276 277 3.008704 TCTGGCATGAGCATAGCATATGT 59.991 43.478 4.29 0.00 44.61 2.29
277 278 3.340928 TGGCATGAGCATAGCATATGTC 58.659 45.455 4.29 0.00 44.61 3.06
278 279 2.350804 GGCATGAGCATAGCATATGTCG 59.649 50.000 4.29 0.00 44.61 4.35
279 280 2.350804 GCATGAGCATAGCATATGTCGG 59.649 50.000 4.29 0.00 41.58 4.79
280 281 3.593096 CATGAGCATAGCATATGTCGGT 58.407 45.455 4.29 0.00 0.00 4.69
281 282 4.747810 CATGAGCATAGCATATGTCGGTA 58.252 43.478 4.29 0.00 0.00 4.02
282 283 5.354767 CATGAGCATAGCATATGTCGGTAT 58.645 41.667 4.29 0.00 0.00 2.73
283 284 4.998788 TGAGCATAGCATATGTCGGTATC 58.001 43.478 4.29 0.00 0.00 2.24
284 285 4.706962 TGAGCATAGCATATGTCGGTATCT 59.293 41.667 4.29 0.00 0.00 1.98
285 286 5.185828 TGAGCATAGCATATGTCGGTATCTT 59.814 40.000 4.29 0.00 0.00 2.40
286 287 6.042638 AGCATAGCATATGTCGGTATCTTT 57.957 37.500 4.29 0.00 0.00 2.52
287 288 6.467677 AGCATAGCATATGTCGGTATCTTTT 58.532 36.000 4.29 0.00 0.00 2.27
288 289 6.369890 AGCATAGCATATGTCGGTATCTTTTG 59.630 38.462 4.29 0.00 0.00 2.44
289 290 6.537566 CATAGCATATGTCGGTATCTTTTGC 58.462 40.000 4.29 0.00 0.00 3.68
290 291 4.708177 AGCATATGTCGGTATCTTTTGCT 58.292 39.130 4.29 0.00 33.37 3.91
291 292 4.512944 AGCATATGTCGGTATCTTTTGCTG 59.487 41.667 4.29 0.00 36.62 4.41
292 293 4.319766 GCATATGTCGGTATCTTTTGCTGG 60.320 45.833 4.29 0.00 0.00 4.85
293 294 3.627395 ATGTCGGTATCTTTTGCTGGA 57.373 42.857 0.00 0.00 0.00 3.86
294 295 2.695359 TGTCGGTATCTTTTGCTGGAC 58.305 47.619 0.00 0.00 0.00 4.02
295 296 2.007608 GTCGGTATCTTTTGCTGGACC 58.992 52.381 0.00 0.00 0.00 4.46
296 297 1.626321 TCGGTATCTTTTGCTGGACCA 59.374 47.619 0.00 0.00 0.00 4.02
297 298 2.238646 TCGGTATCTTTTGCTGGACCAT 59.761 45.455 0.00 0.00 0.00 3.55
298 299 2.355756 CGGTATCTTTTGCTGGACCATG 59.644 50.000 0.00 0.00 0.00 3.66
299 300 2.689983 GGTATCTTTTGCTGGACCATGG 59.310 50.000 11.19 11.19 0.00 3.66
300 301 1.188863 ATCTTTTGCTGGACCATGGC 58.811 50.000 13.04 4.47 0.00 4.40
301 302 1.213537 CTTTTGCTGGACCATGGCG 59.786 57.895 13.04 0.00 0.00 5.69
302 303 1.228398 TTTTGCTGGACCATGGCGA 60.228 52.632 13.04 0.90 0.00 5.54
303 304 0.825425 TTTTGCTGGACCATGGCGAA 60.825 50.000 13.04 4.61 0.00 4.70
304 305 1.243342 TTTGCTGGACCATGGCGAAG 61.243 55.000 13.04 7.75 0.00 3.79
318 319 4.821589 GAAGCCGGAGAGCGTGGG 62.822 72.222 5.05 0.00 38.01 4.61
321 322 4.821589 GCCGGAGAGCGTGGGAAG 62.822 72.222 5.05 0.00 0.00 3.46
322 323 3.068691 CCGGAGAGCGTGGGAAGA 61.069 66.667 0.00 0.00 0.00 2.87
323 324 2.492090 CGGAGAGCGTGGGAAGAG 59.508 66.667 0.00 0.00 0.00 2.85
324 325 2.185608 GGAGAGCGTGGGAAGAGC 59.814 66.667 0.00 0.00 0.00 4.09
325 326 2.650116 GGAGAGCGTGGGAAGAGCA 61.650 63.158 0.00 0.00 0.00 4.26
326 327 1.153667 GAGAGCGTGGGAAGAGCAG 60.154 63.158 0.00 0.00 0.00 4.24
327 328 2.817396 GAGCGTGGGAAGAGCAGC 60.817 66.667 0.00 0.00 0.00 5.25
328 329 4.749310 AGCGTGGGAAGAGCAGCG 62.749 66.667 0.00 0.00 0.00 5.18
330 331 4.069232 CGTGGGAAGAGCAGCGGA 62.069 66.667 0.00 0.00 0.00 5.54
331 332 2.125350 GTGGGAAGAGCAGCGGAG 60.125 66.667 0.00 0.00 0.00 4.63
332 333 2.604686 TGGGAAGAGCAGCGGAGT 60.605 61.111 0.00 0.00 0.00 3.85
333 334 1.304962 TGGGAAGAGCAGCGGAGTA 60.305 57.895 0.00 0.00 0.00 2.59
334 335 1.323271 TGGGAAGAGCAGCGGAGTAG 61.323 60.000 0.00 0.00 0.00 2.57
335 336 1.439644 GGAAGAGCAGCGGAGTAGG 59.560 63.158 0.00 0.00 0.00 3.18
336 337 1.038130 GGAAGAGCAGCGGAGTAGGA 61.038 60.000 0.00 0.00 0.00 2.94
337 338 0.383949 GAAGAGCAGCGGAGTAGGAG 59.616 60.000 0.00 0.00 0.00 3.69
338 339 0.033991 AAGAGCAGCGGAGTAGGAGA 60.034 55.000 0.00 0.00 0.00 3.71
339 340 0.033991 AGAGCAGCGGAGTAGGAGAA 60.034 55.000 0.00 0.00 0.00 2.87
340 341 0.818296 GAGCAGCGGAGTAGGAGAAA 59.182 55.000 0.00 0.00 0.00 2.52
341 342 1.410882 GAGCAGCGGAGTAGGAGAAAT 59.589 52.381 0.00 0.00 0.00 2.17
342 343 1.137872 AGCAGCGGAGTAGGAGAAATG 59.862 52.381 0.00 0.00 0.00 2.32
343 344 1.137086 GCAGCGGAGTAGGAGAAATGA 59.863 52.381 0.00 0.00 0.00 2.57
344 345 2.801342 GCAGCGGAGTAGGAGAAATGAG 60.801 54.545 0.00 0.00 0.00 2.90
345 346 2.035632 AGCGGAGTAGGAGAAATGAGG 58.964 52.381 0.00 0.00 0.00 3.86
346 347 1.757699 GCGGAGTAGGAGAAATGAGGT 59.242 52.381 0.00 0.00 0.00 3.85
347 348 2.482142 GCGGAGTAGGAGAAATGAGGTG 60.482 54.545 0.00 0.00 0.00 4.00
348 349 2.101582 CGGAGTAGGAGAAATGAGGTGG 59.898 54.545 0.00 0.00 0.00 4.61
349 350 3.375699 GGAGTAGGAGAAATGAGGTGGA 58.624 50.000 0.00 0.00 0.00 4.02
350 351 3.970640 GGAGTAGGAGAAATGAGGTGGAT 59.029 47.826 0.00 0.00 0.00 3.41
351 352 4.202305 GGAGTAGGAGAAATGAGGTGGATG 60.202 50.000 0.00 0.00 0.00 3.51
352 353 3.713764 AGTAGGAGAAATGAGGTGGATGG 59.286 47.826 0.00 0.00 0.00 3.51
353 354 1.849039 AGGAGAAATGAGGTGGATGGG 59.151 52.381 0.00 0.00 0.00 4.00
354 355 1.133668 GGAGAAATGAGGTGGATGGGG 60.134 57.143 0.00 0.00 0.00 4.96
355 356 0.929244 AGAAATGAGGTGGATGGGGG 59.071 55.000 0.00 0.00 0.00 5.40
369 370 3.958860 GGGGGAGGCGATGGATGG 61.959 72.222 0.00 0.00 0.00 3.51
370 371 2.849162 GGGGAGGCGATGGATGGA 60.849 66.667 0.00 0.00 0.00 3.41
371 372 2.427753 GGGAGGCGATGGATGGAC 59.572 66.667 0.00 0.00 0.00 4.02
372 373 2.143419 GGGAGGCGATGGATGGACT 61.143 63.158 0.00 0.00 0.00 3.85
373 374 0.832135 GGGAGGCGATGGATGGACTA 60.832 60.000 0.00 0.00 0.00 2.59
374 375 0.605589 GGAGGCGATGGATGGACTAG 59.394 60.000 0.00 0.00 0.00 2.57
375 376 0.605589 GAGGCGATGGATGGACTAGG 59.394 60.000 0.00 0.00 0.00 3.02
376 377 0.833834 AGGCGATGGATGGACTAGGG 60.834 60.000 0.00 0.00 0.00 3.53
377 378 1.122019 GGCGATGGATGGACTAGGGT 61.122 60.000 0.00 0.00 0.00 4.34
378 379 0.759346 GCGATGGATGGACTAGGGTT 59.241 55.000 0.00 0.00 0.00 4.11
379 380 1.541233 GCGATGGATGGACTAGGGTTG 60.541 57.143 0.00 0.00 0.00 3.77
380 381 1.070758 CGATGGATGGACTAGGGTTGG 59.929 57.143 0.00 0.00 0.00 3.77
381 382 1.421646 GATGGATGGACTAGGGTTGGG 59.578 57.143 0.00 0.00 0.00 4.12
382 383 0.623324 TGGATGGACTAGGGTTGGGG 60.623 60.000 0.00 0.00 0.00 4.96
383 384 0.327191 GGATGGACTAGGGTTGGGGA 60.327 60.000 0.00 0.00 0.00 4.81
384 385 0.837940 GATGGACTAGGGTTGGGGAC 59.162 60.000 0.00 0.00 0.00 4.46
385 386 0.981277 ATGGACTAGGGTTGGGGACG 60.981 60.000 0.00 0.00 0.00 4.79
386 387 2.582978 GACTAGGGTTGGGGACGC 59.417 66.667 0.00 0.00 41.25 5.19
387 388 3.007323 ACTAGGGTTGGGGACGCC 61.007 66.667 0.53 0.53 41.84 5.68
388 389 4.157120 CTAGGGTTGGGGACGCCG 62.157 72.222 3.81 0.00 41.84 6.46
397 398 3.912907 GGGACGCCGGTCGATCAT 61.913 66.667 22.10 2.51 44.39 2.45
398 399 2.558286 GGGACGCCGGTCGATCATA 61.558 63.158 22.10 0.00 44.39 2.15
399 400 1.081376 GGACGCCGGTCGATCATAG 60.081 63.158 22.10 0.00 44.39 2.23
400 401 1.729838 GACGCCGGTCGATCATAGC 60.730 63.158 22.10 0.00 41.67 2.97
401 402 2.335011 CGCCGGTCGATCATAGCA 59.665 61.111 12.11 0.00 41.67 3.49
402 403 1.080501 CGCCGGTCGATCATAGCAT 60.081 57.895 12.11 0.00 41.67 3.79
403 404 0.170339 CGCCGGTCGATCATAGCATA 59.830 55.000 12.11 0.00 41.67 3.14
404 405 1.202302 CGCCGGTCGATCATAGCATAT 60.202 52.381 12.11 0.00 41.67 1.78
405 406 2.196749 GCCGGTCGATCATAGCATATG 58.803 52.381 1.90 0.00 0.00 1.78
406 407 2.814269 CCGGTCGATCATAGCATATGG 58.186 52.381 4.56 0.00 0.00 2.74
407 408 2.166459 CCGGTCGATCATAGCATATGGT 59.834 50.000 12.78 12.78 0.00 3.55
408 409 3.368427 CCGGTCGATCATAGCATATGGTT 60.368 47.826 13.49 0.00 0.00 3.67
409 410 3.614176 CGGTCGATCATAGCATATGGTTG 59.386 47.826 13.49 10.97 0.00 3.77
410 411 4.569943 GGTCGATCATAGCATATGGTTGT 58.430 43.478 13.49 0.00 0.00 3.32
411 412 4.627467 GGTCGATCATAGCATATGGTTGTC 59.373 45.833 13.49 5.74 0.00 3.18
412 413 4.627467 GTCGATCATAGCATATGGTTGTCC 59.373 45.833 13.49 6.94 0.00 4.02
440 441 6.840780 AACATTTTCAGAAATCCCTGGTAG 57.159 37.500 0.00 0.00 33.25 3.18
443 444 6.884836 ACATTTTCAGAAATCCCTGGTAGTAC 59.115 38.462 0.00 0.00 33.25 2.73
476 483 5.313712 AGTGTAATGGAAGAACACCGAAAT 58.686 37.500 1.46 0.00 43.58 2.17
489 496 1.066143 ACCGAAATGCCTGTACTGAGG 60.066 52.381 0.60 0.00 36.03 3.86
531 539 0.522180 CACGCCTCGTACAGAGTCTT 59.478 55.000 11.85 0.00 45.44 3.01
536 544 3.215975 GCCTCGTACAGAGTCTTCCTAT 58.784 50.000 11.85 0.00 45.44 2.57
537 545 4.387598 GCCTCGTACAGAGTCTTCCTATA 58.612 47.826 11.85 0.00 45.44 1.31
538 546 4.453136 GCCTCGTACAGAGTCTTCCTATAG 59.547 50.000 11.85 0.00 45.44 1.31
539 547 4.453136 CCTCGTACAGAGTCTTCCTATAGC 59.547 50.000 11.85 0.00 45.44 2.97
554 564 4.011023 CCTATAGCACTACTACCGCTCAT 58.989 47.826 0.00 0.00 37.20 2.90
686 698 2.522193 GGCCGAAACCCAAACCCA 60.522 61.111 0.00 0.00 0.00 4.51
1030 1046 1.383799 CCCCATTCTCCAGCAACCA 59.616 57.895 0.00 0.00 0.00 3.67
1044 1066 0.593773 CAACCAACCACGGCGAAAAG 60.594 55.000 16.62 0.72 0.00 2.27
1045 1067 1.033202 AACCAACCACGGCGAAAAGT 61.033 50.000 16.62 1.45 0.00 2.66
1046 1068 1.281656 CCAACCACGGCGAAAAGTC 59.718 57.895 16.62 0.00 0.00 3.01
1047 1069 1.164041 CCAACCACGGCGAAAAGTCT 61.164 55.000 16.62 0.00 0.00 3.24
1048 1070 0.041312 CAACCACGGCGAAAAGTCTG 60.041 55.000 16.62 0.00 0.00 3.51
1049 1071 0.179067 AACCACGGCGAAAAGTCTGA 60.179 50.000 16.62 0.00 0.00 3.27
1050 1072 0.179067 ACCACGGCGAAAAGTCTGAA 60.179 50.000 16.62 0.00 0.00 3.02
1051 1073 1.156736 CCACGGCGAAAAGTCTGAAT 58.843 50.000 16.62 0.00 0.00 2.57
1052 1074 1.128692 CCACGGCGAAAAGTCTGAATC 59.871 52.381 16.62 0.00 0.00 2.52
1053 1075 2.069273 CACGGCGAAAAGTCTGAATCT 58.931 47.619 16.62 0.00 0.00 2.40
1054 1076 2.092838 CACGGCGAAAAGTCTGAATCTC 59.907 50.000 16.62 0.00 0.00 2.75
1055 1077 1.661112 CGGCGAAAAGTCTGAATCTCC 59.339 52.381 0.00 0.00 0.00 3.71
1061 1083 4.808364 CGAAAAGTCTGAATCTCCATCTCC 59.192 45.833 0.00 0.00 0.00 3.71
1085 1119 1.243342 CCATCTCCAAACCGCAGCAA 61.243 55.000 0.00 0.00 0.00 3.91
1087 1121 1.244019 ATCTCCAAACCGCAGCAACC 61.244 55.000 0.00 0.00 0.00 3.77
1088 1122 2.909965 TCCAAACCGCAGCAACCC 60.910 61.111 0.00 0.00 0.00 4.11
1089 1123 3.222855 CCAAACCGCAGCAACCCA 61.223 61.111 0.00 0.00 0.00 4.51
1091 1132 3.223589 AAACCGCAGCAACCCACC 61.224 61.111 0.00 0.00 0.00 4.61
1244 1288 2.430367 GTCAAGAAGCCCCACCGT 59.570 61.111 0.00 0.00 0.00 4.83
1549 1593 2.280457 GGCTCTGTATGCGCCCTC 60.280 66.667 4.18 0.00 40.51 4.30
1589 1633 5.537300 TCCTGCTAGATGTTTATGACTCC 57.463 43.478 0.00 0.00 0.00 3.85
1590 1634 5.211973 TCCTGCTAGATGTTTATGACTCCT 58.788 41.667 0.00 0.00 0.00 3.69
1591 1635 5.069648 TCCTGCTAGATGTTTATGACTCCTG 59.930 44.000 0.00 0.00 0.00 3.86
1592 1636 5.163364 CCTGCTAGATGTTTATGACTCCTGT 60.163 44.000 0.00 0.00 0.00 4.00
1593 1637 6.040955 CCTGCTAGATGTTTATGACTCCTGTA 59.959 42.308 0.00 0.00 0.00 2.74
1619 1679 2.315176 TGTTTGCCCTGCTTGTATGTT 58.685 42.857 0.00 0.00 0.00 2.71
1692 1752 7.926018 TCACGCATCTTTTATGCTAAATCTCTA 59.074 33.333 8.22 0.00 42.50 2.43
1704 1765 8.760980 ATGCTAAATCTCTAGTCTGTTCTACT 57.239 34.615 0.00 0.00 0.00 2.57
1705 1766 8.215926 TGCTAAATCTCTAGTCTGTTCTACTC 57.784 38.462 0.00 0.00 0.00 2.59
1706 1767 7.283580 TGCTAAATCTCTAGTCTGTTCTACTCC 59.716 40.741 0.00 0.00 0.00 3.85
1707 1768 7.283580 GCTAAATCTCTAGTCTGTTCTACTCCA 59.716 40.741 0.00 0.00 0.00 3.86
1708 1769 7.399245 AAATCTCTAGTCTGTTCTACTCCAC 57.601 40.000 0.00 0.00 0.00 4.02
1741 1804 4.376819 GCTAGATCTGTTATGCGTGATTGC 60.377 45.833 5.18 0.00 0.00 3.56
1829 1896 2.898738 CTGCGATCTGGGAGTGCT 59.101 61.111 0.00 0.00 0.00 4.40
1880 1947 6.237969 CGAATTTGTTGGAAATTCCGTTGTTT 60.238 34.615 7.60 0.00 41.29 2.83
1921 1993 1.762370 TGTTGCTGGACAAGACTCTGA 59.238 47.619 0.00 0.00 39.50 3.27
1922 1994 2.369860 TGTTGCTGGACAAGACTCTGAT 59.630 45.455 0.00 0.00 39.50 2.90
1923 1995 2.740981 GTTGCTGGACAAGACTCTGATG 59.259 50.000 0.00 0.00 39.50 3.07
1924 1996 1.973515 TGCTGGACAAGACTCTGATGT 59.026 47.619 0.00 0.00 0.00 3.06
1925 1997 2.289257 TGCTGGACAAGACTCTGATGTG 60.289 50.000 0.00 0.00 0.00 3.21
1926 1998 2.289320 GCTGGACAAGACTCTGATGTGT 60.289 50.000 0.00 0.00 0.00 3.72
1927 1999 3.056536 GCTGGACAAGACTCTGATGTGTA 60.057 47.826 0.00 0.00 0.00 2.90
1928 2000 4.382470 GCTGGACAAGACTCTGATGTGTAT 60.382 45.833 0.00 0.00 0.00 2.29
1929 2001 5.330455 TGGACAAGACTCTGATGTGTATC 57.670 43.478 0.00 0.00 0.00 2.24
1930 2002 4.160439 TGGACAAGACTCTGATGTGTATCC 59.840 45.833 0.00 0.00 32.09 2.59
1931 2003 4.404073 GGACAAGACTCTGATGTGTATCCT 59.596 45.833 0.00 0.00 32.09 3.24
1932 2004 5.105146 GGACAAGACTCTGATGTGTATCCTT 60.105 44.000 0.00 0.00 32.09 3.36
1933 2005 5.728471 ACAAGACTCTGATGTGTATCCTTG 58.272 41.667 0.00 0.00 35.50 3.61
1934 2006 5.481824 ACAAGACTCTGATGTGTATCCTTGA 59.518 40.000 0.00 0.00 34.23 3.02
1935 2007 6.014242 ACAAGACTCTGATGTGTATCCTTGAA 60.014 38.462 0.00 0.00 34.23 2.69
1936 2008 6.611613 AGACTCTGATGTGTATCCTTGAAA 57.388 37.500 0.00 0.00 32.09 2.69
1937 2009 6.638610 AGACTCTGATGTGTATCCTTGAAAG 58.361 40.000 0.00 0.00 32.09 2.62
1938 2010 6.438741 AGACTCTGATGTGTATCCTTGAAAGA 59.561 38.462 0.00 0.00 32.09 2.52
1939 2011 7.009179 ACTCTGATGTGTATCCTTGAAAGAA 57.991 36.000 0.00 0.00 32.09 2.52
1940 2012 7.102346 ACTCTGATGTGTATCCTTGAAAGAAG 58.898 38.462 0.00 0.00 32.09 2.85
1941 2013 7.038729 ACTCTGATGTGTATCCTTGAAAGAAGA 60.039 37.037 0.00 0.00 32.09 2.87
1942 2014 7.099764 TCTGATGTGTATCCTTGAAAGAAGAC 58.900 38.462 0.00 0.00 32.09 3.01
1943 2015 7.009179 TGATGTGTATCCTTGAAAGAAGACT 57.991 36.000 0.00 0.00 32.09 3.24
1944 2016 7.099764 TGATGTGTATCCTTGAAAGAAGACTC 58.900 38.462 0.00 0.00 32.09 3.36
1945 2017 6.672266 TGTGTATCCTTGAAAGAAGACTCT 57.328 37.500 0.00 0.00 0.00 3.24
1946 2018 6.459066 TGTGTATCCTTGAAAGAAGACTCTG 58.541 40.000 0.00 0.00 30.03 3.35
1947 2019 6.267699 TGTGTATCCTTGAAAGAAGACTCTGA 59.732 38.462 0.00 0.00 30.03 3.27
1948 2020 7.038729 TGTGTATCCTTGAAAGAAGACTCTGAT 60.039 37.037 0.00 0.00 30.03 2.90
1949 2021 7.277539 GTGTATCCTTGAAAGAAGACTCTGATG 59.722 40.741 0.00 0.00 30.03 3.07
1950 2022 5.815233 TCCTTGAAAGAAGACTCTGATGT 57.185 39.130 0.00 0.00 30.03 3.06
1951 2023 5.545588 TCCTTGAAAGAAGACTCTGATGTG 58.454 41.667 0.00 0.00 30.03 3.21
2024 2096 2.441750 TGCTGGTCCTCTTTAAACAGGT 59.558 45.455 9.10 0.00 0.00 4.00
2026 2098 3.326747 CTGGTCCTCTTTAAACAGGTCG 58.673 50.000 9.10 0.00 0.00 4.79
2027 2099 2.701951 TGGTCCTCTTTAAACAGGTCGT 59.298 45.455 9.10 0.00 0.00 4.34
2028 2100 3.135167 TGGTCCTCTTTAAACAGGTCGTT 59.865 43.478 9.10 0.00 40.50 3.85
2033 2105 5.987347 TCCTCTTTAAACAGGTCGTTACTTG 59.013 40.000 9.10 0.00 36.59 3.16
2046 2118 2.738846 CGTTACTTGCTGCAGATTCAGT 59.261 45.455 20.43 14.47 36.49 3.41
2047 2119 3.187227 CGTTACTTGCTGCAGATTCAGTT 59.813 43.478 20.43 0.00 36.49 3.16
2048 2120 4.388773 CGTTACTTGCTGCAGATTCAGTTA 59.611 41.667 20.43 3.87 36.49 2.24
2049 2121 5.063944 CGTTACTTGCTGCAGATTCAGTTAT 59.936 40.000 20.43 0.00 36.49 1.89
2050 2122 6.255670 CGTTACTTGCTGCAGATTCAGTTATA 59.744 38.462 20.43 0.00 36.49 0.98
2051 2123 7.201522 CGTTACTTGCTGCAGATTCAGTTATAA 60.202 37.037 20.43 1.78 36.49 0.98
2052 2124 6.428385 ACTTGCTGCAGATTCAGTTATAAC 57.572 37.500 20.43 7.57 36.49 1.89
2053 2125 6.176183 ACTTGCTGCAGATTCAGTTATAACT 58.824 36.000 20.43 12.50 40.60 2.24
2054 2126 7.331026 ACTTGCTGCAGATTCAGTTATAACTA 58.669 34.615 20.43 4.20 37.08 2.24
2055 2127 7.824289 ACTTGCTGCAGATTCAGTTATAACTAA 59.176 33.333 20.43 12.35 37.08 2.24
2056 2128 8.737168 TTGCTGCAGATTCAGTTATAACTAAT 57.263 30.769 20.43 15.84 37.08 1.73
2057 2129 9.830975 TTGCTGCAGATTCAGTTATAACTAATA 57.169 29.630 20.43 6.85 37.08 0.98
2058 2130 9.830975 TGCTGCAGATTCAGTTATAACTAATAA 57.169 29.630 20.43 12.40 37.08 1.40
2184 2261 3.131709 ACCATGAGTACTATGCATGCC 57.868 47.619 16.68 0.00 38.40 4.40
2228 2305 6.037062 GCAAAAACAAAACAATACAAGGAGCT 59.963 34.615 0.00 0.00 0.00 4.09
2236 2313 3.184541 CAATACAAGGAGCTTGCATTGC 58.815 45.455 0.46 0.46 43.55 3.56
2308 2385 8.589338 CAGCAGGTATATCCTTTATGAAGTACT 58.411 37.037 0.00 0.00 45.67 2.73
2309 2386 9.824216 AGCAGGTATATCCTTTATGAAGTACTA 57.176 33.333 0.00 0.00 45.67 1.82
2310 2387 9.857957 GCAGGTATATCCTTTATGAAGTACTAC 57.142 37.037 0.00 0.00 45.67 2.73
2315 2392 6.651975 ATCCTTTATGAAGTACTACCTCCG 57.348 41.667 0.00 0.00 0.00 4.63
2316 2393 5.513233 TCCTTTATGAAGTACTACCTCCGT 58.487 41.667 0.00 0.00 0.00 4.69
2317 2394 6.662755 TCCTTTATGAAGTACTACCTCCGTA 58.337 40.000 0.00 0.00 0.00 4.02
2318 2395 7.118723 TCCTTTATGAAGTACTACCTCCGTAA 58.881 38.462 0.00 0.00 0.00 3.18
2319 2396 7.615365 TCCTTTATGAAGTACTACCTCCGTAAA 59.385 37.037 0.00 2.06 0.00 2.01
2320 2397 7.704047 CCTTTATGAAGTACTACCTCCGTAAAC 59.296 40.741 0.00 0.00 0.00 2.01
2321 2398 7.701539 TTATGAAGTACTACCTCCGTAAACA 57.298 36.000 0.00 0.00 0.00 2.83
2322 2399 6.594788 ATGAAGTACTACCTCCGTAAACAA 57.405 37.500 0.00 0.00 0.00 2.83
2323 2400 6.403866 TGAAGTACTACCTCCGTAAACAAA 57.596 37.500 0.00 0.00 0.00 2.83
2324 2401 6.996509 TGAAGTACTACCTCCGTAAACAAAT 58.003 36.000 0.00 0.00 0.00 2.32
2325 2402 8.121305 TGAAGTACTACCTCCGTAAACAAATA 57.879 34.615 0.00 0.00 0.00 1.40
2326 2403 8.752187 TGAAGTACTACCTCCGTAAACAAATAT 58.248 33.333 0.00 0.00 0.00 1.28
2332 2409 7.924947 ACTACCTCCGTAAACAAATATAAGAGC 59.075 37.037 0.00 0.00 0.00 4.09
2333 2410 6.053650 ACCTCCGTAAACAAATATAAGAGCC 58.946 40.000 0.00 0.00 0.00 4.70
2334 2411 6.126854 ACCTCCGTAAACAAATATAAGAGCCT 60.127 38.462 0.00 0.00 0.00 4.58
2335 2412 6.766467 CCTCCGTAAACAAATATAAGAGCCTT 59.234 38.462 0.00 0.00 0.00 4.35
2336 2413 7.282450 CCTCCGTAAACAAATATAAGAGCCTTT 59.718 37.037 0.00 0.00 0.00 3.11
2337 2414 9.321562 CTCCGTAAACAAATATAAGAGCCTTTA 57.678 33.333 0.00 0.00 0.00 1.85
2338 2415 9.321562 TCCGTAAACAAATATAAGAGCCTTTAG 57.678 33.333 0.00 0.00 0.00 1.85
2339 2416 8.557029 CCGTAAACAAATATAAGAGCCTTTAGG 58.443 37.037 0.00 0.00 38.53 2.69
2340 2417 9.106070 CGTAAACAAATATAAGAGCCTTTAGGT 57.894 33.333 0.00 0.00 37.57 3.08
2343 2420 8.507524 AACAAATATAAGAGCCTTTAGGTCAC 57.492 34.615 0.00 0.00 45.87 3.67
2344 2421 7.862675 ACAAATATAAGAGCCTTTAGGTCACT 58.137 34.615 0.00 0.00 45.87 3.41
2345 2422 8.989131 ACAAATATAAGAGCCTTTAGGTCACTA 58.011 33.333 0.00 0.00 45.87 2.74
2346 2423 9.262358 CAAATATAAGAGCCTTTAGGTCACTAC 57.738 37.037 0.00 0.00 45.87 2.73
2347 2424 8.785184 AATATAAGAGCCTTTAGGTCACTACT 57.215 34.615 0.00 0.00 45.87 2.57
2348 2425 8.785184 ATATAAGAGCCTTTAGGTCACTACTT 57.215 34.615 0.00 0.00 45.87 2.24
2349 2426 5.827326 AAGAGCCTTTAGGTCACTACTTT 57.173 39.130 0.00 0.00 45.87 2.66
2350 2427 6.930068 AAGAGCCTTTAGGTCACTACTTTA 57.070 37.500 0.00 0.00 45.87 1.85
2351 2428 6.532988 AGAGCCTTTAGGTCACTACTTTAG 57.467 41.667 0.00 0.00 45.87 1.85
2352 2429 6.017830 AGAGCCTTTAGGTCACTACTTTAGT 58.982 40.000 0.00 0.00 45.87 2.24
2353 2430 6.038997 AGCCTTTAGGTCACTACTTTAGTG 57.961 41.667 6.97 6.97 45.34 2.74
2366 2443 7.393841 ACTACTTTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 40.05 4.09
2367 2444 7.828712 ACTACTTTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 40.05 2.85
2368 2445 8.954350 ACTACTTTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 40.05 2.10
2369 2446 9.953697 CTACTTTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 40.05 1.73
2384 2461 9.654663 AAACGCTCTTATATTTCTTTACAGAGT 57.345 29.630 0.00 0.00 30.86 3.24
2385 2462 8.635877 ACGCTCTTATATTTCTTTACAGAGTG 57.364 34.615 0.00 0.00 41.26 3.51
2386 2463 8.467598 ACGCTCTTATATTTCTTTACAGAGTGA 58.532 33.333 12.51 0.00 38.95 3.41
2486 2571 1.943340 GGATTTGTTCAGGCGAGGATC 59.057 52.381 0.00 0.00 0.00 3.36
2522 2607 9.638934 CGCAAGATCTTACAGCAAAATGCAAAC 62.639 40.741 7.86 0.00 44.17 2.93
2570 2655 5.164022 GCAAAATGCAAAACAGATCACTAGC 60.164 40.000 0.00 0.00 44.26 3.42
2571 2656 5.710513 AAATGCAAAACAGATCACTAGCA 57.289 34.783 0.00 0.00 35.03 3.49
2573 2658 4.690184 TGCAAAACAGATCACTAGCATG 57.310 40.909 0.00 0.00 0.00 4.06
2583 2670 4.341806 AGATCACTAGCATGTCAGAAGGAG 59.658 45.833 0.00 0.00 0.00 3.69
2624 2713 5.689383 TTGTAACTGCAGAACATTCCTTC 57.311 39.130 23.35 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.679716 GGAGCAACAGGCCATCCT 59.320 61.111 5.01 0.00 46.50 3.24
7 8 2.825836 CGGAGCAACAGGCCATCC 60.826 66.667 5.01 1.07 46.50 3.51
49 50 1.586564 GATGTCGAGGCGGAGTTCG 60.587 63.158 0.00 0.00 42.76 3.95
50 51 1.227002 GGATGTCGAGGCGGAGTTC 60.227 63.158 0.00 0.00 0.00 3.01
51 52 1.668101 GAGGATGTCGAGGCGGAGTT 61.668 60.000 0.00 0.00 0.00 3.01
52 53 2.043852 AGGATGTCGAGGCGGAGT 60.044 61.111 0.00 0.00 0.00 3.85
53 54 2.725008 GAGGATGTCGAGGCGGAG 59.275 66.667 0.00 0.00 0.00 4.63
54 55 2.833582 GGAGGATGTCGAGGCGGA 60.834 66.667 0.00 0.00 0.00 5.54
55 56 2.502492 ATGGAGGATGTCGAGGCGG 61.502 63.158 0.00 0.00 0.00 6.13
56 57 1.300465 CATGGAGGATGTCGAGGCG 60.300 63.158 0.00 0.00 0.00 5.52
57 58 0.179000 AACATGGAGGATGTCGAGGC 59.821 55.000 0.00 0.00 45.12 4.70
58 59 1.482182 TCAACATGGAGGATGTCGAGG 59.518 52.381 0.00 0.00 45.12 4.63
59 60 2.967599 TCAACATGGAGGATGTCGAG 57.032 50.000 0.00 0.00 45.12 4.04
60 61 2.677902 GCTTCAACATGGAGGATGTCGA 60.678 50.000 0.00 0.00 45.12 4.20
61 62 1.667724 GCTTCAACATGGAGGATGTCG 59.332 52.381 0.00 0.00 45.12 4.35
62 63 2.019984 GGCTTCAACATGGAGGATGTC 58.980 52.381 0.00 0.00 45.12 3.06
64 65 1.396653 GGGCTTCAACATGGAGGATG 58.603 55.000 0.00 0.00 38.15 3.51
65 66 0.107017 CGGGCTTCAACATGGAGGAT 60.107 55.000 0.00 0.00 0.00 3.24
66 67 1.299648 CGGGCTTCAACATGGAGGA 59.700 57.895 0.00 0.00 0.00 3.71
67 68 1.750399 CCGGGCTTCAACATGGAGG 60.750 63.158 0.00 0.00 0.00 4.30
68 69 0.745845 CTCCGGGCTTCAACATGGAG 60.746 60.000 0.00 0.00 37.29 3.86
69 70 1.299648 CTCCGGGCTTCAACATGGA 59.700 57.895 0.00 0.00 0.00 3.41
70 71 1.002134 ACTCCGGGCTTCAACATGG 60.002 57.895 0.00 0.00 0.00 3.66
71 72 1.361668 CGACTCCGGGCTTCAACATG 61.362 60.000 0.00 0.00 0.00 3.21
72 73 1.079127 CGACTCCGGGCTTCAACAT 60.079 57.895 0.00 0.00 0.00 2.71
73 74 2.342279 CGACTCCGGGCTTCAACA 59.658 61.111 0.00 0.00 0.00 3.33
85 86 4.443266 AAGAGCTGGCGCCGACTC 62.443 66.667 31.03 31.03 36.60 3.36
86 87 4.749310 CAAGAGCTGGCGCCGACT 62.749 66.667 23.90 21.73 36.60 4.18
97 98 0.530431 GGAGCAGCTAGAGCAAGAGC 60.530 60.000 4.01 2.58 45.16 4.09
98 99 0.248990 CGGAGCAGCTAGAGCAAGAG 60.249 60.000 4.01 0.00 45.16 2.85
99 100 1.812525 CGGAGCAGCTAGAGCAAGA 59.187 57.895 4.01 0.00 45.16 3.02
100 101 4.416533 CGGAGCAGCTAGAGCAAG 57.583 61.111 4.01 0.00 45.16 4.01
113 114 3.213402 GAGGAGGACGAGGCGGAG 61.213 72.222 0.00 0.00 0.00 4.63
114 115 4.816984 GGAGGAGGACGAGGCGGA 62.817 72.222 0.00 0.00 0.00 5.54
128 129 4.452733 GAGGTTGCGGGTCCGGAG 62.453 72.222 3.06 0.00 41.44 4.63
131 132 3.622060 AATGGAGGTTGCGGGTCCG 62.622 63.158 4.85 4.85 43.09 4.79
132 133 2.046285 CAATGGAGGTTGCGGGTCC 61.046 63.158 0.00 0.00 0.00 4.46
133 134 2.046285 CCAATGGAGGTTGCGGGTC 61.046 63.158 0.00 0.00 0.00 4.46
134 135 2.035626 CCAATGGAGGTTGCGGGT 59.964 61.111 0.00 0.00 0.00 5.28
135 136 3.451894 GCCAATGGAGGTTGCGGG 61.452 66.667 2.05 0.00 0.00 6.13
136 137 2.361610 AGCCAATGGAGGTTGCGG 60.362 61.111 2.05 0.00 0.00 5.69
137 138 1.243342 TTGAGCCAATGGAGGTTGCG 61.243 55.000 2.05 0.00 0.00 4.85
138 139 0.244721 GTTGAGCCAATGGAGGTTGC 59.755 55.000 2.05 0.00 0.00 4.17
139 140 1.815003 GAGTTGAGCCAATGGAGGTTG 59.185 52.381 2.05 0.00 0.00 3.77
140 141 1.272147 GGAGTTGAGCCAATGGAGGTT 60.272 52.381 2.05 0.00 0.00 3.50
141 142 0.329596 GGAGTTGAGCCAATGGAGGT 59.670 55.000 2.05 0.00 0.00 3.85
142 143 0.622665 AGGAGTTGAGCCAATGGAGG 59.377 55.000 2.05 0.00 0.00 4.30
143 144 1.407989 GGAGGAGTTGAGCCAATGGAG 60.408 57.143 2.05 0.00 0.00 3.86
144 145 0.620556 GGAGGAGTTGAGCCAATGGA 59.379 55.000 2.05 0.00 0.00 3.41
145 146 0.622665 AGGAGGAGTTGAGCCAATGG 59.377 55.000 0.00 0.00 0.00 3.16
146 147 1.407989 GGAGGAGGAGTTGAGCCAATG 60.408 57.143 0.00 0.00 0.00 2.82
147 148 0.915364 GGAGGAGGAGTTGAGCCAAT 59.085 55.000 0.00 0.00 0.00 3.16
148 149 0.178891 AGGAGGAGGAGTTGAGCCAA 60.179 55.000 0.00 0.00 0.00 4.52
149 150 0.616111 GAGGAGGAGGAGTTGAGCCA 60.616 60.000 0.00 0.00 0.00 4.75
150 151 1.334384 GGAGGAGGAGGAGTTGAGCC 61.334 65.000 0.00 0.00 0.00 4.70
151 152 1.671901 CGGAGGAGGAGGAGTTGAGC 61.672 65.000 0.00 0.00 0.00 4.26
152 153 2.499214 CGGAGGAGGAGGAGTTGAG 58.501 63.158 0.00 0.00 0.00 3.02
153 154 4.766272 CGGAGGAGGAGGAGTTGA 57.234 61.111 0.00 0.00 0.00 3.18
176 177 3.056328 GTTGCCTCCGGACTTGCC 61.056 66.667 0.00 0.00 0.00 4.52
177 178 3.056328 GGTTGCCTCCGGACTTGC 61.056 66.667 0.00 4.24 0.00 4.01
178 179 2.359975 GGGTTGCCTCCGGACTTG 60.360 66.667 0.00 0.00 0.00 3.16
179 180 4.016706 CGGGTTGCCTCCGGACTT 62.017 66.667 0.00 0.00 43.45 3.01
181 182 4.754667 GTCGGGTTGCCTCCGGAC 62.755 72.222 0.00 15.22 46.78 4.79
183 184 4.760047 CTGTCGGGTTGCCTCCGG 62.760 72.222 0.00 0.00 46.78 5.14
186 187 3.665675 ATCGCTGTCGGGTTGCCTC 62.666 63.158 0.00 0.00 36.13 4.70
187 188 3.706373 ATCGCTGTCGGGTTGCCT 61.706 61.111 0.00 0.00 36.13 4.75
188 189 3.499737 CATCGCTGTCGGGTTGCC 61.500 66.667 0.00 0.00 36.13 4.52
189 190 4.166011 GCATCGCTGTCGGGTTGC 62.166 66.667 0.00 0.00 40.18 4.17
190 191 3.853330 CGCATCGCTGTCGGGTTG 61.853 66.667 0.00 0.00 36.13 3.77
213 214 3.781770 GAGATCCAGGCGAGGCACG 62.782 68.421 0.00 0.00 45.66 5.34
214 215 2.107953 GAGATCCAGGCGAGGCAC 59.892 66.667 0.00 0.00 0.00 5.01
215 216 3.157252 GGAGATCCAGGCGAGGCA 61.157 66.667 0.00 0.00 35.64 4.75
216 217 2.841988 AGGAGATCCAGGCGAGGC 60.842 66.667 0.92 0.00 38.89 4.70
217 218 3.136750 CAGGAGATCCAGGCGAGG 58.863 66.667 0.92 0.00 38.89 4.63
218 219 2.086251 GAGCAGGAGATCCAGGCGAG 62.086 65.000 0.92 0.00 41.54 5.03
219 220 2.042537 AGCAGGAGATCCAGGCGA 60.043 61.111 0.92 0.00 41.54 5.54
220 221 2.420890 GAGCAGGAGATCCAGGCG 59.579 66.667 0.92 0.00 41.54 5.52
221 222 1.470996 ATCGAGCAGGAGATCCAGGC 61.471 60.000 0.92 4.63 38.89 4.85
222 223 0.602562 GATCGAGCAGGAGATCCAGG 59.397 60.000 0.00 0.00 37.79 4.45
223 224 1.270274 CAGATCGAGCAGGAGATCCAG 59.730 57.143 2.38 0.00 43.03 3.86
224 225 1.326328 CAGATCGAGCAGGAGATCCA 58.674 55.000 2.38 0.00 43.03 3.41
225 226 0.602562 CCAGATCGAGCAGGAGATCC 59.397 60.000 6.18 0.00 43.03 3.36
226 227 0.038343 GCCAGATCGAGCAGGAGATC 60.038 60.000 17.07 0.00 42.52 2.75
227 228 0.758310 TGCCAGATCGAGCAGGAGAT 60.758 55.000 17.07 0.00 33.08 2.75
228 229 1.380380 TGCCAGATCGAGCAGGAGA 60.380 57.895 17.07 0.00 33.08 3.71
229 230 1.227205 GTGCCAGATCGAGCAGGAG 60.227 63.158 17.07 0.00 40.28 3.69
230 231 2.725312 GGTGCCAGATCGAGCAGGA 61.725 63.158 17.07 0.00 40.28 3.86
231 232 2.202987 GGTGCCAGATCGAGCAGG 60.203 66.667 7.88 7.88 40.28 4.85
232 233 2.584418 CGGTGCCAGATCGAGCAG 60.584 66.667 12.29 0.00 40.28 4.24
233 234 3.068064 TCGGTGCCAGATCGAGCA 61.068 61.111 2.38 8.43 36.44 4.26
234 235 2.583593 GTCGGTGCCAGATCGAGC 60.584 66.667 0.00 0.00 33.41 5.03
235 236 2.278206 CGTCGGTGCCAGATCGAG 60.278 66.667 0.00 0.00 33.41 4.04
236 237 4.492160 GCGTCGGTGCCAGATCGA 62.492 66.667 0.00 0.00 0.00 3.59
237 238 4.498520 AGCGTCGGTGCCAGATCG 62.499 66.667 0.00 0.00 34.65 3.69
238 239 2.583593 GAGCGTCGGTGCCAGATC 60.584 66.667 0.00 0.00 34.65 2.75
239 240 3.071206 AGAGCGTCGGTGCCAGAT 61.071 61.111 0.00 0.00 34.65 2.90
240 241 4.056125 CAGAGCGTCGGTGCCAGA 62.056 66.667 0.00 0.00 34.65 3.86
245 246 3.190849 CATGCCAGAGCGTCGGTG 61.191 66.667 0.00 0.00 44.31 4.94
246 247 3.362399 CTCATGCCAGAGCGTCGGT 62.362 63.158 0.00 0.00 44.31 4.69
247 248 2.584418 CTCATGCCAGAGCGTCGG 60.584 66.667 0.00 0.00 44.31 4.79
253 254 2.186532 ATGCTATGCTCATGCCAGAG 57.813 50.000 4.17 4.17 38.71 3.35
254 255 3.008704 ACATATGCTATGCTCATGCCAGA 59.991 43.478 1.58 0.00 38.71 3.86
255 256 3.344515 ACATATGCTATGCTCATGCCAG 58.655 45.455 1.58 0.00 38.71 4.85
256 257 3.340928 GACATATGCTATGCTCATGCCA 58.659 45.455 1.58 0.00 38.71 4.92
257 258 2.350804 CGACATATGCTATGCTCATGCC 59.649 50.000 1.58 0.00 38.71 4.40
258 259 2.350804 CCGACATATGCTATGCTCATGC 59.649 50.000 1.58 0.00 40.20 4.06
259 260 3.593096 ACCGACATATGCTATGCTCATG 58.407 45.455 1.58 0.00 0.00 3.07
260 261 3.969287 ACCGACATATGCTATGCTCAT 57.031 42.857 1.58 0.00 0.00 2.90
261 262 4.706962 AGATACCGACATATGCTATGCTCA 59.293 41.667 1.58 0.00 0.00 4.26
262 263 5.255710 AGATACCGACATATGCTATGCTC 57.744 43.478 1.58 0.00 0.00 4.26
263 264 5.667539 AAGATACCGACATATGCTATGCT 57.332 39.130 1.58 0.00 0.00 3.79
264 265 6.537566 CAAAAGATACCGACATATGCTATGC 58.462 40.000 1.58 0.00 0.00 3.14
265 266 6.369890 AGCAAAAGATACCGACATATGCTATG 59.630 38.462 1.58 2.73 39.61 2.23
266 267 6.369890 CAGCAAAAGATACCGACATATGCTAT 59.630 38.462 1.58 0.00 39.40 2.97
267 268 5.696270 CAGCAAAAGATACCGACATATGCTA 59.304 40.000 1.58 0.00 39.40 3.49
268 269 4.512944 CAGCAAAAGATACCGACATATGCT 59.487 41.667 1.58 0.00 41.88 3.79
269 270 4.319766 CCAGCAAAAGATACCGACATATGC 60.320 45.833 1.58 0.00 0.00 3.14
270 271 5.050091 GTCCAGCAAAAGATACCGACATATG 60.050 44.000 0.00 0.00 0.00 1.78
271 272 5.057149 GTCCAGCAAAAGATACCGACATAT 58.943 41.667 0.00 0.00 0.00 1.78
272 273 4.439057 GTCCAGCAAAAGATACCGACATA 58.561 43.478 0.00 0.00 0.00 2.29
273 274 3.270877 GTCCAGCAAAAGATACCGACAT 58.729 45.455 0.00 0.00 0.00 3.06
274 275 2.614481 GGTCCAGCAAAAGATACCGACA 60.614 50.000 0.00 0.00 0.00 4.35
275 276 2.007608 GGTCCAGCAAAAGATACCGAC 58.992 52.381 0.00 0.00 0.00 4.79
276 277 1.626321 TGGTCCAGCAAAAGATACCGA 59.374 47.619 0.00 0.00 0.00 4.69
277 278 2.107950 TGGTCCAGCAAAAGATACCG 57.892 50.000 0.00 0.00 0.00 4.02
278 279 2.689983 CCATGGTCCAGCAAAAGATACC 59.310 50.000 2.57 0.00 0.00 2.73
279 280 2.099756 GCCATGGTCCAGCAAAAGATAC 59.900 50.000 14.67 0.00 0.00 2.24
280 281 2.378038 GCCATGGTCCAGCAAAAGATA 58.622 47.619 14.67 0.00 0.00 1.98
281 282 1.188863 GCCATGGTCCAGCAAAAGAT 58.811 50.000 14.67 0.00 0.00 2.40
282 283 1.243342 CGCCATGGTCCAGCAAAAGA 61.243 55.000 14.67 0.00 0.00 2.52
283 284 1.213537 CGCCATGGTCCAGCAAAAG 59.786 57.895 14.67 0.00 0.00 2.27
284 285 0.825425 TTCGCCATGGTCCAGCAAAA 60.825 50.000 14.67 0.00 0.00 2.44
285 286 1.228398 TTCGCCATGGTCCAGCAAA 60.228 52.632 14.67 0.00 0.00 3.68
286 287 1.675310 CTTCGCCATGGTCCAGCAA 60.675 57.895 14.67 0.00 0.00 3.91
287 288 2.046023 CTTCGCCATGGTCCAGCA 60.046 61.111 14.67 0.00 0.00 4.41
288 289 3.512516 GCTTCGCCATGGTCCAGC 61.513 66.667 14.67 13.88 0.00 4.85
301 302 4.821589 CCCACGCTCTCCGGCTTC 62.822 72.222 0.00 0.00 42.52 3.86
304 305 4.821589 CTTCCCACGCTCTCCGGC 62.822 72.222 0.00 0.00 42.52 6.13
305 306 3.068691 TCTTCCCACGCTCTCCGG 61.069 66.667 0.00 0.00 42.52 5.14
306 307 2.492090 CTCTTCCCACGCTCTCCG 59.508 66.667 0.00 0.00 44.21 4.63
307 308 2.185608 GCTCTTCCCACGCTCTCC 59.814 66.667 0.00 0.00 0.00 3.71
308 309 1.153667 CTGCTCTTCCCACGCTCTC 60.154 63.158 0.00 0.00 0.00 3.20
309 310 2.977178 CTGCTCTTCCCACGCTCT 59.023 61.111 0.00 0.00 0.00 4.09
310 311 2.817396 GCTGCTCTTCCCACGCTC 60.817 66.667 0.00 0.00 0.00 5.03
311 312 4.749310 CGCTGCTCTTCCCACGCT 62.749 66.667 0.00 0.00 0.00 5.07
313 314 3.997064 CTCCGCTGCTCTTCCCACG 62.997 68.421 0.00 0.00 0.00 4.94
314 315 1.605058 TACTCCGCTGCTCTTCCCAC 61.605 60.000 0.00 0.00 0.00 4.61
315 316 1.304962 TACTCCGCTGCTCTTCCCA 60.305 57.895 0.00 0.00 0.00 4.37
316 317 1.439644 CTACTCCGCTGCTCTTCCC 59.560 63.158 0.00 0.00 0.00 3.97
317 318 1.038130 TCCTACTCCGCTGCTCTTCC 61.038 60.000 0.00 0.00 0.00 3.46
318 319 0.383949 CTCCTACTCCGCTGCTCTTC 59.616 60.000 0.00 0.00 0.00 2.87
319 320 0.033991 TCTCCTACTCCGCTGCTCTT 60.034 55.000 0.00 0.00 0.00 2.85
320 321 0.033991 TTCTCCTACTCCGCTGCTCT 60.034 55.000 0.00 0.00 0.00 4.09
321 322 0.818296 TTTCTCCTACTCCGCTGCTC 59.182 55.000 0.00 0.00 0.00 4.26
322 323 1.137872 CATTTCTCCTACTCCGCTGCT 59.862 52.381 0.00 0.00 0.00 4.24
323 324 1.137086 TCATTTCTCCTACTCCGCTGC 59.863 52.381 0.00 0.00 0.00 5.25
324 325 2.223923 CCTCATTTCTCCTACTCCGCTG 60.224 54.545 0.00 0.00 0.00 5.18
325 326 2.035632 CCTCATTTCTCCTACTCCGCT 58.964 52.381 0.00 0.00 0.00 5.52
326 327 1.757699 ACCTCATTTCTCCTACTCCGC 59.242 52.381 0.00 0.00 0.00 5.54
327 328 2.101582 CCACCTCATTTCTCCTACTCCG 59.898 54.545 0.00 0.00 0.00 4.63
328 329 3.375699 TCCACCTCATTTCTCCTACTCC 58.624 50.000 0.00 0.00 0.00 3.85
329 330 4.202305 CCATCCACCTCATTTCTCCTACTC 60.202 50.000 0.00 0.00 0.00 2.59
330 331 3.713764 CCATCCACCTCATTTCTCCTACT 59.286 47.826 0.00 0.00 0.00 2.57
331 332 3.181450 CCCATCCACCTCATTTCTCCTAC 60.181 52.174 0.00 0.00 0.00 3.18
332 333 3.048600 CCCATCCACCTCATTTCTCCTA 58.951 50.000 0.00 0.00 0.00 2.94
333 334 1.849039 CCCATCCACCTCATTTCTCCT 59.151 52.381 0.00 0.00 0.00 3.69
334 335 1.133668 CCCCATCCACCTCATTTCTCC 60.134 57.143 0.00 0.00 0.00 3.71
335 336 1.133668 CCCCCATCCACCTCATTTCTC 60.134 57.143 0.00 0.00 0.00 2.87
336 337 0.929244 CCCCCATCCACCTCATTTCT 59.071 55.000 0.00 0.00 0.00 2.52
337 338 3.520623 CCCCCATCCACCTCATTTC 57.479 57.895 0.00 0.00 0.00 2.17
352 353 3.958860 CCATCCATCGCCTCCCCC 61.959 72.222 0.00 0.00 0.00 5.40
353 354 2.849162 TCCATCCATCGCCTCCCC 60.849 66.667 0.00 0.00 0.00 4.81
354 355 0.832135 TAGTCCATCCATCGCCTCCC 60.832 60.000 0.00 0.00 0.00 4.30
355 356 0.605589 CTAGTCCATCCATCGCCTCC 59.394 60.000 0.00 0.00 0.00 4.30
356 357 0.605589 CCTAGTCCATCCATCGCCTC 59.394 60.000 0.00 0.00 0.00 4.70
357 358 0.833834 CCCTAGTCCATCCATCGCCT 60.834 60.000 0.00 0.00 0.00 5.52
358 359 1.122019 ACCCTAGTCCATCCATCGCC 61.122 60.000 0.00 0.00 0.00 5.54
359 360 0.759346 AACCCTAGTCCATCCATCGC 59.241 55.000 0.00 0.00 0.00 4.58
360 361 1.070758 CCAACCCTAGTCCATCCATCG 59.929 57.143 0.00 0.00 0.00 3.84
361 362 1.421646 CCCAACCCTAGTCCATCCATC 59.578 57.143 0.00 0.00 0.00 3.51
362 363 1.522900 CCCAACCCTAGTCCATCCAT 58.477 55.000 0.00 0.00 0.00 3.41
363 364 0.623324 CCCCAACCCTAGTCCATCCA 60.623 60.000 0.00 0.00 0.00 3.41
364 365 0.327191 TCCCCAACCCTAGTCCATCC 60.327 60.000 0.00 0.00 0.00 3.51
365 366 0.837940 GTCCCCAACCCTAGTCCATC 59.162 60.000 0.00 0.00 0.00 3.51
366 367 0.981277 CGTCCCCAACCCTAGTCCAT 60.981 60.000 0.00 0.00 0.00 3.41
367 368 1.611261 CGTCCCCAACCCTAGTCCA 60.611 63.158 0.00 0.00 0.00 4.02
368 369 3.027675 GCGTCCCCAACCCTAGTCC 62.028 68.421 0.00 0.00 0.00 3.85
369 370 2.582978 GCGTCCCCAACCCTAGTC 59.417 66.667 0.00 0.00 0.00 2.59
370 371 3.007323 GGCGTCCCCAACCCTAGT 61.007 66.667 0.00 0.00 0.00 2.57
371 372 4.157120 CGGCGTCCCCAACCCTAG 62.157 72.222 0.00 0.00 0.00 3.02
380 381 2.473664 CTATGATCGACCGGCGTCCC 62.474 65.000 16.00 8.51 41.80 4.46
381 382 1.081376 CTATGATCGACCGGCGTCC 60.081 63.158 16.00 10.46 41.80 4.79
382 383 1.729838 GCTATGATCGACCGGCGTC 60.730 63.158 16.00 13.18 41.80 5.19
383 384 1.806461 ATGCTATGATCGACCGGCGT 61.806 55.000 16.00 5.83 41.80 5.68
384 385 0.170339 TATGCTATGATCGACCGGCG 59.830 55.000 0.00 6.66 42.69 6.46
385 386 2.196749 CATATGCTATGATCGACCGGC 58.803 52.381 0.00 0.00 0.00 6.13
386 387 2.166459 ACCATATGCTATGATCGACCGG 59.834 50.000 0.00 0.00 0.00 5.28
387 388 3.510388 ACCATATGCTATGATCGACCG 57.490 47.619 0.00 0.00 0.00 4.79
388 389 4.569943 ACAACCATATGCTATGATCGACC 58.430 43.478 0.00 0.00 0.00 4.79
389 390 4.627467 GGACAACCATATGCTATGATCGAC 59.373 45.833 0.00 0.00 35.97 4.20
390 391 4.283212 TGGACAACCATATGCTATGATCGA 59.717 41.667 0.00 0.00 41.77 3.59
391 392 4.568956 TGGACAACCATATGCTATGATCG 58.431 43.478 0.00 0.00 41.77 3.69
405 406 8.655651 TTTCTGAAAATGTTAAATGGACAACC 57.344 30.769 0.00 0.00 0.00 3.77
407 408 9.487790 GGATTTCTGAAAATGTTAAATGGACAA 57.512 29.630 6.95 0.00 35.21 3.18
408 409 8.093927 GGGATTTCTGAAAATGTTAAATGGACA 58.906 33.333 6.95 0.00 35.21 4.02
409 410 8.314021 AGGGATTTCTGAAAATGTTAAATGGAC 58.686 33.333 6.95 0.00 35.21 4.02
410 411 8.313292 CAGGGATTTCTGAAAATGTTAAATGGA 58.687 33.333 6.95 0.00 35.21 3.41
411 412 7.550196 CCAGGGATTTCTGAAAATGTTAAATGG 59.450 37.037 6.95 4.54 35.21 3.16
412 413 8.096414 ACCAGGGATTTCTGAAAATGTTAAATG 58.904 33.333 6.95 0.00 35.21 2.32
413 414 8.206126 ACCAGGGATTTCTGAAAATGTTAAAT 57.794 30.769 6.95 0.00 35.21 1.40
414 415 7.610580 ACCAGGGATTTCTGAAAATGTTAAA 57.389 32.000 6.95 0.00 35.21 1.52
415 416 7.947890 ACTACCAGGGATTTCTGAAAATGTTAA 59.052 33.333 6.95 0.00 35.21 2.01
416 417 7.466804 ACTACCAGGGATTTCTGAAAATGTTA 58.533 34.615 6.95 0.00 35.21 2.41
417 418 6.314917 ACTACCAGGGATTTCTGAAAATGTT 58.685 36.000 6.95 0.00 35.21 2.71
418 419 5.892348 ACTACCAGGGATTTCTGAAAATGT 58.108 37.500 6.95 1.85 35.21 2.71
419 420 7.112779 AGTACTACCAGGGATTTCTGAAAATG 58.887 38.462 6.95 4.38 35.21 2.32
420 421 7.272144 AGTACTACCAGGGATTTCTGAAAAT 57.728 36.000 6.95 0.00 37.80 1.82
421 422 6.697641 AGTACTACCAGGGATTTCTGAAAA 57.302 37.500 6.95 0.00 36.93 2.29
422 423 7.179076 GTAGTACTACCAGGGATTTCTGAAA 57.821 40.000 20.47 5.15 36.93 2.69
423 424 6.786967 GTAGTACTACCAGGGATTTCTGAA 57.213 41.667 20.47 0.00 36.93 3.02
440 441 6.710597 TCCATTACACTCTGATGGTAGTAC 57.289 41.667 0.00 0.00 40.89 2.73
443 444 6.471233 TCTTCCATTACACTCTGATGGTAG 57.529 41.667 0.00 0.00 40.89 3.18
458 465 2.231235 GGCATTTCGGTGTTCTTCCATT 59.769 45.455 0.00 0.00 0.00 3.16
507 515 2.034532 TGTACGAGGCGTGGAGGA 59.965 61.111 2.33 0.00 41.39 3.71
512 520 4.767633 GACTCTGTACGAGGCGTG 57.232 61.111 15.76 0.00 44.33 5.34
531 539 3.072038 TGAGCGGTAGTAGTGCTATAGGA 59.928 47.826 1.04 0.00 39.49 2.94
536 544 3.409570 CCTATGAGCGGTAGTAGTGCTA 58.590 50.000 0.00 0.00 39.49 3.49
537 545 2.231529 CCTATGAGCGGTAGTAGTGCT 58.768 52.381 0.00 0.00 42.73 4.40
538 546 1.336056 GCCTATGAGCGGTAGTAGTGC 60.336 57.143 0.00 0.00 0.00 4.40
539 547 1.954382 TGCCTATGAGCGGTAGTAGTG 59.046 52.381 0.00 0.00 34.65 2.74
554 564 2.402282 GATCGCGATCCGTGTGCCTA 62.402 60.000 33.80 0.00 38.57 3.93
1030 1046 0.179067 TCAGACTTTTCGCCGTGGTT 60.179 50.000 0.00 0.00 0.00 3.67
1044 1066 4.021192 GGAGATGGAGATGGAGATTCAGAC 60.021 50.000 0.00 0.00 0.00 3.51
1045 1067 4.158786 GGAGATGGAGATGGAGATTCAGA 58.841 47.826 0.00 0.00 0.00 3.27
1046 1068 3.902467 TGGAGATGGAGATGGAGATTCAG 59.098 47.826 0.00 0.00 0.00 3.02
1047 1069 3.932601 TGGAGATGGAGATGGAGATTCA 58.067 45.455 0.00 0.00 0.00 2.57
1048 1070 4.778958 AGATGGAGATGGAGATGGAGATTC 59.221 45.833 0.00 0.00 0.00 2.52
1049 1071 4.765629 AGATGGAGATGGAGATGGAGATT 58.234 43.478 0.00 0.00 0.00 2.40
1050 1072 4.355549 GAGATGGAGATGGAGATGGAGAT 58.644 47.826 0.00 0.00 0.00 2.75
1051 1073 3.501935 GGAGATGGAGATGGAGATGGAGA 60.502 52.174 0.00 0.00 0.00 3.71
1052 1074 2.833338 GGAGATGGAGATGGAGATGGAG 59.167 54.545 0.00 0.00 0.00 3.86
1053 1075 2.180751 TGGAGATGGAGATGGAGATGGA 59.819 50.000 0.00 0.00 0.00 3.41
1054 1076 2.617658 TGGAGATGGAGATGGAGATGG 58.382 52.381 0.00 0.00 0.00 3.51
1055 1077 4.387598 GTTTGGAGATGGAGATGGAGATG 58.612 47.826 0.00 0.00 0.00 2.90
1061 1083 1.303309 GCGGTTTGGAGATGGAGATG 58.697 55.000 0.00 0.00 0.00 2.90
1589 1633 2.543653 GCAGGGCAAACAACAACTACAG 60.544 50.000 0.00 0.00 0.00 2.74
1590 1634 1.407258 GCAGGGCAAACAACAACTACA 59.593 47.619 0.00 0.00 0.00 2.74
1591 1635 1.681264 AGCAGGGCAAACAACAACTAC 59.319 47.619 0.00 0.00 0.00 2.73
1592 1636 2.065899 AGCAGGGCAAACAACAACTA 57.934 45.000 0.00 0.00 0.00 2.24
1593 1637 1.134729 CAAGCAGGGCAAACAACAACT 60.135 47.619 0.00 0.00 0.00 3.16
1619 1679 4.466726 TGAACATTTGATGGCATCCATTGA 59.533 37.500 23.92 2.54 45.26 2.57
1741 1804 7.931578 TTTACTTACAACCCACATAATCAGG 57.068 36.000 0.00 0.00 0.00 3.86
1798 1865 0.537143 TCGCAGCAATCAAACAGGGT 60.537 50.000 0.00 0.00 0.00 4.34
1800 1867 1.741706 AGATCGCAGCAATCAAACAGG 59.258 47.619 0.00 0.00 0.00 4.00
1829 1896 3.122297 CGCCAAAAGAAATGAAACTGCA 58.878 40.909 0.00 0.00 0.00 4.41
1880 1947 1.064017 ACTGTTCCAGCCAAAGAACCA 60.064 47.619 0.00 0.00 41.36 3.67
1921 1993 7.038729 TCAGAGTCTTCTTTCAAGGATACACAT 60.039 37.037 0.00 0.00 41.41 3.21
1922 1994 6.267699 TCAGAGTCTTCTTTCAAGGATACACA 59.732 38.462 0.00 0.00 41.41 3.72
1923 1995 6.692486 TCAGAGTCTTCTTTCAAGGATACAC 58.308 40.000 0.00 0.00 41.41 2.90
1924 1996 6.918067 TCAGAGTCTTCTTTCAAGGATACA 57.082 37.500 0.00 0.00 41.41 2.29
1925 1997 7.277539 CACATCAGAGTCTTCTTTCAAGGATAC 59.722 40.741 0.00 0.00 0.00 2.24
1926 1998 7.179160 TCACATCAGAGTCTTCTTTCAAGGATA 59.821 37.037 0.00 0.00 0.00 2.59
1927 1999 6.013898 TCACATCAGAGTCTTCTTTCAAGGAT 60.014 38.462 0.00 0.00 0.00 3.24
1928 2000 5.305386 TCACATCAGAGTCTTCTTTCAAGGA 59.695 40.000 0.00 0.00 0.00 3.36
1929 2001 5.545588 TCACATCAGAGTCTTCTTTCAAGG 58.454 41.667 0.00 0.00 0.00 3.61
1930 2002 6.347563 GCTTCACATCAGAGTCTTCTTTCAAG 60.348 42.308 0.00 0.00 0.00 3.02
1931 2003 5.468072 GCTTCACATCAGAGTCTTCTTTCAA 59.532 40.000 0.00 0.00 0.00 2.69
1932 2004 4.993584 GCTTCACATCAGAGTCTTCTTTCA 59.006 41.667 0.00 0.00 0.00 2.69
1933 2005 4.091220 CGCTTCACATCAGAGTCTTCTTTC 59.909 45.833 0.00 0.00 0.00 2.62
1934 2006 3.993081 CGCTTCACATCAGAGTCTTCTTT 59.007 43.478 0.00 0.00 0.00 2.52
1935 2007 3.256879 TCGCTTCACATCAGAGTCTTCTT 59.743 43.478 0.00 0.00 0.00 2.52
1936 2008 2.822561 TCGCTTCACATCAGAGTCTTCT 59.177 45.455 0.00 0.00 0.00 2.85
1937 2009 3.223423 TCGCTTCACATCAGAGTCTTC 57.777 47.619 0.00 0.00 0.00 2.87
1938 2010 3.667497 TTCGCTTCACATCAGAGTCTT 57.333 42.857 0.00 0.00 0.00 3.01
1939 2011 3.667497 TTTCGCTTCACATCAGAGTCT 57.333 42.857 0.00 0.00 0.00 3.24
1940 2012 4.645956 CAATTTCGCTTCACATCAGAGTC 58.354 43.478 0.00 0.00 0.00 3.36
1941 2013 3.120060 GCAATTTCGCTTCACATCAGAGT 60.120 43.478 0.00 0.00 0.00 3.24
1942 2014 3.126514 AGCAATTTCGCTTCACATCAGAG 59.873 43.478 0.00 0.00 39.99 3.35
1943 2015 3.076621 AGCAATTTCGCTTCACATCAGA 58.923 40.909 0.00 0.00 39.99 3.27
1944 2016 3.120095 TCAGCAATTTCGCTTCACATCAG 60.120 43.478 0.00 0.00 41.38 2.90
1945 2017 2.813172 TCAGCAATTTCGCTTCACATCA 59.187 40.909 0.00 0.00 41.38 3.07
1946 2018 3.476295 TCAGCAATTTCGCTTCACATC 57.524 42.857 0.00 0.00 41.38 3.06
1947 2019 3.693085 AGATCAGCAATTTCGCTTCACAT 59.307 39.130 0.00 0.00 41.38 3.21
1948 2020 3.076621 AGATCAGCAATTTCGCTTCACA 58.923 40.909 0.00 0.00 41.38 3.58
1949 2021 3.125829 TCAGATCAGCAATTTCGCTTCAC 59.874 43.478 0.00 0.00 41.38 3.18
1950 2022 3.337358 TCAGATCAGCAATTTCGCTTCA 58.663 40.909 0.00 0.00 41.38 3.02
1951 2023 4.201891 ACATCAGATCAGCAATTTCGCTTC 60.202 41.667 0.00 0.00 41.38 3.86
2004 2076 3.075148 GACCTGTTTAAAGAGGACCAGC 58.925 50.000 32.05 14.71 41.78 4.85
2024 2096 2.995939 CTGAATCTGCAGCAAGTAACGA 59.004 45.455 9.47 0.00 0.00 3.85
2026 2098 4.756084 AACTGAATCTGCAGCAAGTAAC 57.244 40.909 9.47 0.00 39.51 2.50
2027 2099 7.824289 AGTTATAACTGAATCTGCAGCAAGTAA 59.176 33.333 17.35 0.00 39.51 2.24
2028 2100 7.331026 AGTTATAACTGAATCTGCAGCAAGTA 58.669 34.615 17.35 0.00 39.51 2.24
2184 2261 8.692615 GTTTTTGCATCCAAATTATTTTGCAAG 58.307 29.630 20.28 0.00 40.40 4.01
2228 2305 4.082136 TCAACAATATGAGCAGCAATGCAA 60.082 37.500 8.35 0.00 37.25 4.08
2236 2313 9.608617 GAATGTATTCATCAACAATATGAGCAG 57.391 33.333 0.00 0.00 34.93 4.24
2292 2369 6.134754 ACGGAGGTAGTACTTCATAAAGGAT 58.865 40.000 13.79 0.00 36.78 3.24
2308 2385 7.070322 AGGCTCTTATATTTGTTTACGGAGGTA 59.930 37.037 0.00 0.00 0.00 3.08
2309 2386 6.053650 GGCTCTTATATTTGTTTACGGAGGT 58.946 40.000 0.00 0.00 0.00 3.85
2310 2387 6.289064 AGGCTCTTATATTTGTTTACGGAGG 58.711 40.000 0.00 0.00 0.00 4.30
2311 2388 7.787725 AAGGCTCTTATATTTGTTTACGGAG 57.212 36.000 0.00 0.00 0.00 4.63
2312 2389 9.321562 CTAAAGGCTCTTATATTTGTTTACGGA 57.678 33.333 0.00 0.00 0.00 4.69
2313 2390 8.557029 CCTAAAGGCTCTTATATTTGTTTACGG 58.443 37.037 0.00 0.00 0.00 4.02
2314 2391 9.106070 ACCTAAAGGCTCTTATATTTGTTTACG 57.894 33.333 0.00 0.00 39.32 3.18
2317 2394 8.957466 GTGACCTAAAGGCTCTTATATTTGTTT 58.043 33.333 0.00 0.00 39.32 2.83
2318 2395 8.329502 AGTGACCTAAAGGCTCTTATATTTGTT 58.670 33.333 0.00 0.00 39.32 2.83
2319 2396 7.862675 AGTGACCTAAAGGCTCTTATATTTGT 58.137 34.615 0.00 0.00 39.32 2.83
2320 2397 9.262358 GTAGTGACCTAAAGGCTCTTATATTTG 57.738 37.037 0.00 0.00 39.32 2.32
2321 2398 9.214962 AGTAGTGACCTAAAGGCTCTTATATTT 57.785 33.333 0.00 0.00 39.32 1.40
2322 2399 8.785184 AGTAGTGACCTAAAGGCTCTTATATT 57.215 34.615 0.00 0.00 39.32 1.28
2323 2400 8.785184 AAGTAGTGACCTAAAGGCTCTTATAT 57.215 34.615 0.00 0.00 39.32 0.86
2324 2401 8.605325 AAAGTAGTGACCTAAAGGCTCTTATA 57.395 34.615 0.00 0.00 39.32 0.98
2325 2402 7.497773 AAAGTAGTGACCTAAAGGCTCTTAT 57.502 36.000 0.00 0.00 39.32 1.73
2326 2403 6.930068 AAAGTAGTGACCTAAAGGCTCTTA 57.070 37.500 0.00 0.00 39.32 2.10
2327 2404 5.827326 AAAGTAGTGACCTAAAGGCTCTT 57.173 39.130 0.00 0.00 39.32 2.85
2328 2405 6.017830 ACTAAAGTAGTGACCTAAAGGCTCT 58.982 40.000 0.00 0.00 37.69 4.09
2329 2406 6.283544 ACTAAAGTAGTGACCTAAAGGCTC 57.716 41.667 0.00 0.00 37.69 4.70
2342 2419 7.393841 AGAGCGTTTAGATCACTAAAGTAGT 57.606 36.000 0.00 0.00 45.42 2.73
2343 2420 9.953697 ATAAGAGCGTTTAGATCACTAAAGTAG 57.046 33.333 0.00 0.00 45.42 2.57
2358 2435 9.654663 ACTCTGTAAAGAAATATAAGAGCGTTT 57.345 29.630 0.00 0.00 0.00 3.60
2359 2436 9.088512 CACTCTGTAAAGAAATATAAGAGCGTT 57.911 33.333 0.00 0.00 0.00 4.84
2360 2437 8.467598 TCACTCTGTAAAGAAATATAAGAGCGT 58.532 33.333 0.00 0.00 0.00 5.07
2361 2438 8.858003 TCACTCTGTAAAGAAATATAAGAGCG 57.142 34.615 0.00 0.00 0.00 5.03
2368 2445 9.836864 TGCATGTATCACTCTGTAAAGAAATAT 57.163 29.630 0.00 0.00 0.00 1.28
2369 2446 9.665719 TTGCATGTATCACTCTGTAAAGAAATA 57.334 29.630 0.00 0.00 0.00 1.40
2370 2447 8.565896 TTGCATGTATCACTCTGTAAAGAAAT 57.434 30.769 0.00 0.00 0.00 2.17
2371 2448 7.977789 TTGCATGTATCACTCTGTAAAGAAA 57.022 32.000 0.00 0.00 0.00 2.52
2372 2449 7.977789 TTTGCATGTATCACTCTGTAAAGAA 57.022 32.000 0.00 0.00 0.00 2.52
2373 2450 7.977789 TTTTGCATGTATCACTCTGTAAAGA 57.022 32.000 0.00 0.00 0.00 2.52
2374 2451 8.453320 TGATTTTGCATGTATCACTCTGTAAAG 58.547 33.333 0.00 0.00 0.00 1.85
2375 2452 8.334263 TGATTTTGCATGTATCACTCTGTAAA 57.666 30.769 0.00 0.00 0.00 2.01
2376 2453 7.920160 TGATTTTGCATGTATCACTCTGTAA 57.080 32.000 0.00 0.00 0.00 2.41
2377 2454 7.012610 CCATGATTTTGCATGTATCACTCTGTA 59.987 37.037 7.74 0.00 43.16 2.74
2378 2455 6.183360 CCATGATTTTGCATGTATCACTCTGT 60.183 38.462 7.74 0.00 43.16 3.41
2379 2456 6.183360 ACCATGATTTTGCATGTATCACTCTG 60.183 38.462 7.74 4.22 43.16 3.35
2380 2457 5.889853 ACCATGATTTTGCATGTATCACTCT 59.110 36.000 7.74 0.00 43.16 3.24
2381 2458 6.140303 ACCATGATTTTGCATGTATCACTC 57.860 37.500 7.74 0.00 43.16 3.51
2382 2459 7.643569 TTACCATGATTTTGCATGTATCACT 57.356 32.000 7.74 0.00 43.16 3.41
2383 2460 6.418819 GCTTACCATGATTTTGCATGTATCAC 59.581 38.462 7.74 0.00 43.16 3.06
2384 2461 6.321945 AGCTTACCATGATTTTGCATGTATCA 59.678 34.615 0.00 7.95 43.16 2.15
2385 2462 6.742109 AGCTTACCATGATTTTGCATGTATC 58.258 36.000 0.00 0.00 43.16 2.24
2386 2463 6.720112 AGCTTACCATGATTTTGCATGTAT 57.280 33.333 0.00 0.00 43.16 2.29
2486 2571 1.944676 GATCTTGCGACGCCTACGG 60.945 63.158 18.69 2.96 46.04 4.02
2494 2579 4.404507 TTTTGCTGTAAGATCTTGCGAC 57.595 40.909 18.47 12.56 34.07 5.19
2498 2583 6.128742 GGTTTGCATTTTGCTGTAAGATCTTG 60.129 38.462 18.47 2.50 45.31 3.02
2522 2607 2.550978 ACAATCTTTCGATGCCTACGG 58.449 47.619 0.00 0.00 0.00 4.02
2561 2646 4.340666 TCTCCTTCTGACATGCTAGTGATC 59.659 45.833 0.00 0.00 0.00 2.92
2562 2647 4.285020 TCTCCTTCTGACATGCTAGTGAT 58.715 43.478 0.00 0.00 0.00 3.06
2563 2648 3.701664 TCTCCTTCTGACATGCTAGTGA 58.298 45.455 0.00 0.00 0.00 3.41
2564 2649 4.081752 AGTTCTCCTTCTGACATGCTAGTG 60.082 45.833 0.00 0.00 0.00 2.74
2566 2651 4.402155 AGAGTTCTCCTTCTGACATGCTAG 59.598 45.833 0.00 0.00 0.00 3.42
2567 2652 4.159321 CAGAGTTCTCCTTCTGACATGCTA 59.841 45.833 0.00 0.00 32.38 3.49
2570 2655 3.859443 CCAGAGTTCTCCTTCTGACATG 58.141 50.000 3.22 0.00 32.38 3.21
2571 2656 2.235898 GCCAGAGTTCTCCTTCTGACAT 59.764 50.000 3.22 0.00 32.38 3.06
2573 2658 1.899142 AGCCAGAGTTCTCCTTCTGAC 59.101 52.381 3.22 0.00 32.38 3.51
2583 2670 2.301577 ATACGCTCAAGCCAGAGTTC 57.698 50.000 5.08 0.00 37.94 3.01
2624 2713 7.035004 GCTAGTATCAGATAAAGAGATGCCAG 58.965 42.308 5.55 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.