Multiple sequence alignment - TraesCS7B01G015400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G015400 | chr7B | 100.000 | 9171 | 0 | 0 | 1 | 9171 | 12540643 | 12531473 | 0.000000e+00 | 16936.0 |
1 | TraesCS7B01G015400 | chr7B | 92.287 | 4382 | 252 | 39 | 1488 | 5835 | 12805817 | 12810146 | 0.000000e+00 | 6141.0 |
2 | TraesCS7B01G015400 | chr7B | 87.635 | 3065 | 308 | 40 | 906 | 3928 | 13119595 | 13116560 | 0.000000e+00 | 3494.0 |
3 | TraesCS7B01G015400 | chr7B | 87.162 | 1885 | 195 | 25 | 3384 | 5239 | 13626554 | 13624688 | 0.000000e+00 | 2097.0 |
4 | TraesCS7B01G015400 | chr7B | 94.977 | 1314 | 59 | 5 | 5822 | 7132 | 12810317 | 12811626 | 0.000000e+00 | 2054.0 |
5 | TraesCS7B01G015400 | chr7B | 83.948 | 1084 | 129 | 26 | 6229 | 7297 | 14065952 | 14064899 | 0.000000e+00 | 996.0 |
6 | TraesCS7B01G015400 | chr7B | 86.319 | 614 | 69 | 10 | 7407 | 8009 | 13859816 | 13859207 | 0.000000e+00 | 654.0 |
7 | TraesCS7B01G015400 | chr7B | 96.142 | 337 | 13 | 0 | 7399 | 7735 | 12819122 | 12819458 | 1.350000e-152 | 551.0 |
8 | TraesCS7B01G015400 | chr7B | 85.066 | 529 | 51 | 12 | 7661 | 8164 | 13801549 | 13801024 | 1.770000e-141 | 514.0 |
9 | TraesCS7B01G015400 | chr7B | 90.052 | 382 | 37 | 1 | 4911 | 5291 | 14066939 | 14066558 | 2.300000e-135 | 494.0 |
10 | TraesCS7B01G015400 | chr7B | 89.817 | 383 | 38 | 1 | 4910 | 5291 | 13115422 | 13115040 | 2.980000e-134 | 490.0 |
11 | TraesCS7B01G015400 | chr7B | 91.756 | 279 | 17 | 2 | 7119 | 7397 | 12812799 | 12813071 | 5.200000e-102 | 383.0 |
12 | TraesCS7B01G015400 | chr7B | 86.786 | 280 | 31 | 4 | 5 | 279 | 111299358 | 111299080 | 3.220000e-79 | 307.0 |
13 | TraesCS7B01G015400 | chr7B | 74.882 | 844 | 127 | 46 | 1 | 804 | 12793756 | 12794554 | 1.160000e-78 | 305.0 |
14 | TraesCS7B01G015400 | chr7B | 85.926 | 270 | 30 | 4 | 7400 | 7663 | 13113059 | 13112792 | 1.950000e-71 | 281.0 |
15 | TraesCS7B01G015400 | chr7B | 94.853 | 136 | 6 | 1 | 8569 | 8704 | 12531354 | 12531488 | 2.590000e-50 | 211.0 |
16 | TraesCS7B01G015400 | chr7B | 78.281 | 221 | 43 | 5 | 5872 | 6089 | 467075671 | 467075889 | 4.470000e-28 | 137.0 |
17 | TraesCS7B01G015400 | chr7D | 93.497 | 7735 | 380 | 51 | 779 | 8418 | 70746149 | 70753855 | 0.000000e+00 | 11383.0 |
18 | TraesCS7B01G015400 | chr7D | 91.095 | 5727 | 359 | 73 | 650 | 6315 | 70229318 | 70234954 | 0.000000e+00 | 7611.0 |
19 | TraesCS7B01G015400 | chr7D | 95.667 | 4362 | 167 | 13 | 1649 | 5994 | 69943369 | 69939014 | 0.000000e+00 | 6988.0 |
20 | TraesCS7B01G015400 | chr7D | 86.598 | 3574 | 380 | 46 | 1771 | 5291 | 71217762 | 71214235 | 0.000000e+00 | 3855.0 |
21 | TraesCS7B01G015400 | chr7D | 94.065 | 2359 | 94 | 9 | 6059 | 8405 | 69939016 | 69936692 | 0.000000e+00 | 3539.0 |
22 | TraesCS7B01G015400 | chr7D | 87.169 | 3094 | 326 | 45 | 906 | 3958 | 70833541 | 70830478 | 0.000000e+00 | 3448.0 |
23 | TraesCS7B01G015400 | chr7D | 88.723 | 2075 | 213 | 10 | 1101 | 3173 | 71551573 | 71549518 | 0.000000e+00 | 2516.0 |
24 | TraesCS7B01G015400 | chr7D | 86.245 | 1265 | 96 | 23 | 463 | 1676 | 69946369 | 69945132 | 0.000000e+00 | 1301.0 |
25 | TraesCS7B01G015400 | chr7D | 83.834 | 866 | 98 | 19 | 6229 | 7092 | 71546148 | 71545323 | 0.000000e+00 | 785.0 |
26 | TraesCS7B01G015400 | chr7D | 83.980 | 799 | 78 | 23 | 7402 | 8177 | 70827647 | 70826876 | 0.000000e+00 | 721.0 |
27 | TraesCS7B01G015400 | chr7D | 85.691 | 601 | 72 | 9 | 7401 | 7990 | 71212065 | 71211468 | 1.010000e-173 | 621.0 |
28 | TraesCS7B01G015400 | chr7D | 89.099 | 477 | 35 | 9 | 8699 | 9171 | 69936638 | 69936175 | 2.220000e-160 | 577.0 |
29 | TraesCS7B01G015400 | chr7D | 84.270 | 356 | 43 | 8 | 3 | 352 | 484298334 | 484297986 | 1.480000e-87 | 335.0 |
30 | TraesCS7B01G015400 | chr7D | 82.164 | 342 | 42 | 13 | 5488 | 5817 | 475155397 | 475155063 | 9.070000e-70 | 276.0 |
31 | TraesCS7B01G015400 | chr7D | 97.810 | 137 | 3 | 0 | 8569 | 8705 | 69936055 | 69936191 | 4.280000e-58 | 237.0 |
32 | TraesCS7B01G015400 | chr7D | 92.053 | 151 | 12 | 0 | 8031 | 8181 | 71313742 | 71313592 | 7.210000e-51 | 213.0 |
33 | TraesCS7B01G015400 | chr7D | 92.414 | 145 | 11 | 0 | 8037 | 8181 | 71211358 | 71211214 | 3.360000e-49 | 207.0 |
34 | TraesCS7B01G015400 | chr7D | 81.290 | 155 | 27 | 2 | 5909 | 6062 | 63559573 | 63559420 | 3.480000e-24 | 124.0 |
35 | TraesCS7B01G015400 | chr7D | 87.342 | 79 | 7 | 2 | 5391 | 5467 | 71362773 | 71362850 | 4.560000e-13 | 87.9 |
36 | TraesCS7B01G015400 | chr7A | 94.044 | 7018 | 336 | 26 | 1458 | 8418 | 76517771 | 76510779 | 0.000000e+00 | 10569.0 |
37 | TraesCS7B01G015400 | chr7A | 93.116 | 3472 | 194 | 20 | 3724 | 7184 | 76828367 | 76831804 | 0.000000e+00 | 5046.0 |
38 | TraesCS7B01G015400 | chr7A | 87.943 | 3898 | 367 | 52 | 1467 | 5281 | 76944423 | 76940546 | 0.000000e+00 | 4499.0 |
39 | TraesCS7B01G015400 | chr7A | 92.260 | 1137 | 57 | 15 | 7253 | 8362 | 76832353 | 76833485 | 0.000000e+00 | 1583.0 |
40 | TraesCS7B01G015400 | chr7A | 85.073 | 1025 | 113 | 16 | 6146 | 7153 | 76982593 | 76981592 | 0.000000e+00 | 1009.0 |
41 | TraesCS7B01G015400 | chr7A | 84.558 | 803 | 88 | 16 | 7405 | 8177 | 76939117 | 76938321 | 0.000000e+00 | 763.0 |
42 | TraesCS7B01G015400 | chr7A | 86.308 | 409 | 37 | 7 | 969 | 1365 | 76518183 | 76517782 | 2.370000e-115 | 427.0 |
43 | TraesCS7B01G015400 | chr7A | 81.860 | 430 | 65 | 8 | 2 | 425 | 552529775 | 552529353 | 5.270000e-92 | 350.0 |
44 | TraesCS7B01G015400 | chr7A | 80.739 | 379 | 49 | 16 | 8707 | 9079 | 76510648 | 76510288 | 3.260000e-69 | 274.0 |
45 | TraesCS7B01G015400 | chr7A | 81.250 | 368 | 39 | 19 | 463 | 804 | 76518683 | 76518320 | 4.220000e-68 | 270.0 |
46 | TraesCS7B01G015400 | chr7A | 83.851 | 161 | 20 | 6 | 592 | 750 | 76813785 | 76813629 | 2.060000e-31 | 148.0 |
47 | TraesCS7B01G015400 | chr7A | 87.912 | 91 | 8 | 2 | 7173 | 7263 | 76832104 | 76832191 | 4.530000e-18 | 104.0 |
48 | TraesCS7B01G015400 | chr7A | 97.143 | 35 | 0 | 1 | 657 | 691 | 76945176 | 76945143 | 3.580000e-04 | 58.4 |
49 | TraesCS7B01G015400 | chrUn | 86.665 | 3562 | 390 | 46 | 1771 | 5291 | 84288210 | 84284693 | 0.000000e+00 | 3868.0 |
50 | TraesCS7B01G015400 | chrUn | 86.665 | 3562 | 390 | 46 | 1771 | 5291 | 226941535 | 226938018 | 0.000000e+00 | 3868.0 |
51 | TraesCS7B01G015400 | chrUn | 87.600 | 3137 | 311 | 32 | 1771 | 4857 | 84239871 | 84236763 | 0.000000e+00 | 3567.0 |
52 | TraesCS7B01G015400 | chrUn | 84.022 | 1258 | 170 | 23 | 6155 | 7393 | 82516139 | 82514894 | 0.000000e+00 | 1181.0 |
53 | TraesCS7B01G015400 | chrUn | 82.776 | 1225 | 148 | 28 | 6172 | 7356 | 84284370 | 84283169 | 0.000000e+00 | 1035.0 |
54 | TraesCS7B01G015400 | chrUn | 82.776 | 1225 | 148 | 28 | 6172 | 7356 | 226937695 | 226936494 | 0.000000e+00 | 1035.0 |
55 | TraesCS7B01G015400 | chrUn | 85.240 | 542 | 52 | 11 | 7661 | 8177 | 84440267 | 84440805 | 4.880000e-147 | 532.0 |
56 | TraesCS7B01G015400 | chrUn | 86.447 | 273 | 29 | 5 | 7396 | 7662 | 84245803 | 84245533 | 9.010000e-75 | 292.0 |
57 | TraesCS7B01G015400 | chrUn | 86.364 | 264 | 27 | 6 | 7405 | 7662 | 82525348 | 82525088 | 7.010000e-71 | 279.0 |
58 | TraesCS7B01G015400 | chrUn | 92.414 | 145 | 11 | 0 | 8037 | 8181 | 84282357 | 84282213 | 3.360000e-49 | 207.0 |
59 | TraesCS7B01G015400 | chrUn | 92.414 | 145 | 11 | 0 | 8037 | 8181 | 226935682 | 226935538 | 3.360000e-49 | 207.0 |
60 | TraesCS7B01G015400 | chr2B | 88.024 | 3148 | 307 | 40 | 1771 | 4867 | 723405159 | 723402031 | 0.000000e+00 | 3661.0 |
61 | TraesCS7B01G015400 | chr2B | 86.824 | 592 | 63 | 9 | 7407 | 7987 | 723388365 | 723387778 | 0.000000e+00 | 647.0 |
62 | TraesCS7B01G015400 | chr2B | 77.692 | 260 | 53 | 3 | 5814 | 6070 | 496462126 | 496462383 | 4.430000e-33 | 154.0 |
63 | TraesCS7B01G015400 | chr4B | 81.690 | 355 | 55 | 5 | 3 | 352 | 456582927 | 456583276 | 4.190000e-73 | 287.0 |
64 | TraesCS7B01G015400 | chr4B | 83.696 | 276 | 36 | 7 | 17 | 287 | 28777976 | 28777705 | 1.530000e-62 | 252.0 |
65 | TraesCS7B01G015400 | chr3D | 81.871 | 342 | 43 | 13 | 5488 | 5817 | 24569710 | 24569376 | 4.220000e-68 | 270.0 |
66 | TraesCS7B01G015400 | chr1D | 81.818 | 341 | 44 | 12 | 5488 | 5817 | 466407125 | 466406792 | 4.220000e-68 | 270.0 |
67 | TraesCS7B01G015400 | chr1D | 91.011 | 89 | 7 | 1 | 8482 | 8569 | 315001768 | 315001856 | 1.620000e-22 | 119.0 |
68 | TraesCS7B01G015400 | chr6A | 84.532 | 278 | 36 | 4 | 15 | 287 | 477509298 | 477509573 | 1.520000e-67 | 268.0 |
69 | TraesCS7B01G015400 | chr2D | 80.563 | 355 | 57 | 10 | 4 | 352 | 423277779 | 423278127 | 7.060000e-66 | 263.0 |
70 | TraesCS7B01G015400 | chr2D | 77.477 | 444 | 79 | 12 | 5 | 443 | 10816429 | 10816856 | 7.110000e-61 | 246.0 |
71 | TraesCS7B01G015400 | chr6B | 78.191 | 376 | 71 | 7 | 70 | 440 | 505306933 | 505306564 | 7.160000e-56 | 230.0 |
72 | TraesCS7B01G015400 | chr3A | 94.048 | 84 | 5 | 0 | 8484 | 8567 | 466063600 | 466063517 | 2.690000e-25 | 128.0 |
73 | TraesCS7B01G015400 | chr2A | 91.398 | 93 | 7 | 1 | 8484 | 8576 | 74163722 | 74163631 | 9.670000e-25 | 126.0 |
74 | TraesCS7B01G015400 | chr2A | 92.941 | 85 | 6 | 0 | 8485 | 8569 | 676365654 | 676365570 | 3.480000e-24 | 124.0 |
75 | TraesCS7B01G015400 | chr5B | 90.526 | 95 | 8 | 1 | 8481 | 8575 | 450577630 | 450577723 | 3.480000e-24 | 124.0 |
76 | TraesCS7B01G015400 | chr4A | 92.941 | 85 | 6 | 0 | 8485 | 8569 | 547660750 | 547660666 | 3.480000e-24 | 124.0 |
77 | TraesCS7B01G015400 | chr6D | 91.954 | 87 | 7 | 0 | 8485 | 8571 | 316259795 | 316259881 | 1.250000e-23 | 122.0 |
78 | TraesCS7B01G015400 | chr4D | 91.765 | 85 | 7 | 0 | 8485 | 8569 | 317189953 | 317189869 | 1.620000e-22 | 119.0 |
79 | TraesCS7B01G015400 | chr5D | 86.538 | 104 | 12 | 1 | 8483 | 8586 | 423381397 | 423381296 | 7.530000e-21 | 113.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G015400 | chr7B | 12531473 | 12540643 | 9170 | True | 16936.000000 | 16936 | 100.000000 | 1 | 9171 | 1 | chr7B.!!$R1 | 9170 |
1 | TraesCS7B01G015400 | chr7B | 12805817 | 12813071 | 7254 | False | 2859.333333 | 6141 | 93.006667 | 1488 | 7397 | 3 | chr7B.!!$F5 | 5909 |
2 | TraesCS7B01G015400 | chr7B | 13624688 | 13626554 | 1866 | True | 2097.000000 | 2097 | 87.162000 | 3384 | 5239 | 1 | chr7B.!!$R2 | 1855 |
3 | TraesCS7B01G015400 | chr7B | 13112792 | 13119595 | 6803 | True | 1421.666667 | 3494 | 87.792667 | 906 | 7663 | 3 | chr7B.!!$R6 | 6757 |
4 | TraesCS7B01G015400 | chr7B | 14064899 | 14066939 | 2040 | True | 745.000000 | 996 | 87.000000 | 4911 | 7297 | 2 | chr7B.!!$R7 | 2386 |
5 | TraesCS7B01G015400 | chr7B | 13859207 | 13859816 | 609 | True | 654.000000 | 654 | 86.319000 | 7407 | 8009 | 1 | chr7B.!!$R4 | 602 |
6 | TraesCS7B01G015400 | chr7B | 13801024 | 13801549 | 525 | True | 514.000000 | 514 | 85.066000 | 7661 | 8164 | 1 | chr7B.!!$R3 | 503 |
7 | TraesCS7B01G015400 | chr7B | 12793756 | 12794554 | 798 | False | 305.000000 | 305 | 74.882000 | 1 | 804 | 1 | chr7B.!!$F2 | 803 |
8 | TraesCS7B01G015400 | chr7D | 70746149 | 70753855 | 7706 | False | 11383.000000 | 11383 | 93.497000 | 779 | 8418 | 1 | chr7D.!!$F3 | 7639 |
9 | TraesCS7B01G015400 | chr7D | 70229318 | 70234954 | 5636 | False | 7611.000000 | 7611 | 91.095000 | 650 | 6315 | 1 | chr7D.!!$F2 | 5665 |
10 | TraesCS7B01G015400 | chr7D | 69936175 | 69946369 | 10194 | True | 3101.250000 | 6988 | 91.269000 | 463 | 9171 | 4 | chr7D.!!$R5 | 8708 |
11 | TraesCS7B01G015400 | chr7D | 70826876 | 70833541 | 6665 | True | 2084.500000 | 3448 | 85.574500 | 906 | 8177 | 2 | chr7D.!!$R6 | 7271 |
12 | TraesCS7B01G015400 | chr7D | 71545323 | 71551573 | 6250 | True | 1650.500000 | 2516 | 86.278500 | 1101 | 7092 | 2 | chr7D.!!$R8 | 5991 |
13 | TraesCS7B01G015400 | chr7D | 71211214 | 71217762 | 6548 | True | 1561.000000 | 3855 | 88.234333 | 1771 | 8181 | 3 | chr7D.!!$R7 | 6410 |
14 | TraesCS7B01G015400 | chr7A | 76510288 | 76518683 | 8395 | True | 2885.000000 | 10569 | 85.585250 | 463 | 9079 | 4 | chr7A.!!$R4 | 8616 |
15 | TraesCS7B01G015400 | chr7A | 76828367 | 76833485 | 5118 | False | 2244.333333 | 5046 | 91.096000 | 3724 | 8362 | 3 | chr7A.!!$F1 | 4638 |
16 | TraesCS7B01G015400 | chr7A | 76938321 | 76945176 | 6855 | True | 1773.466667 | 4499 | 89.881333 | 657 | 8177 | 3 | chr7A.!!$R5 | 7520 |
17 | TraesCS7B01G015400 | chr7A | 76981592 | 76982593 | 1001 | True | 1009.000000 | 1009 | 85.073000 | 6146 | 7153 | 1 | chr7A.!!$R2 | 1007 |
18 | TraesCS7B01G015400 | chrUn | 84236763 | 84239871 | 3108 | True | 3567.000000 | 3567 | 87.600000 | 1771 | 4857 | 1 | chrUn.!!$R3 | 3086 |
19 | TraesCS7B01G015400 | chrUn | 84282213 | 84288210 | 5997 | True | 1703.333333 | 3868 | 87.285000 | 1771 | 8181 | 3 | chrUn.!!$R5 | 6410 |
20 | TraesCS7B01G015400 | chrUn | 226935538 | 226941535 | 5997 | True | 1703.333333 | 3868 | 87.285000 | 1771 | 8181 | 3 | chrUn.!!$R6 | 6410 |
21 | TraesCS7B01G015400 | chrUn | 82514894 | 82516139 | 1245 | True | 1181.000000 | 1181 | 84.022000 | 6155 | 7393 | 1 | chrUn.!!$R1 | 1238 |
22 | TraesCS7B01G015400 | chrUn | 84440267 | 84440805 | 538 | False | 532.000000 | 532 | 85.240000 | 7661 | 8177 | 1 | chrUn.!!$F1 | 516 |
23 | TraesCS7B01G015400 | chr2B | 723402031 | 723405159 | 3128 | True | 3661.000000 | 3661 | 88.024000 | 1771 | 4867 | 1 | chr2B.!!$R2 | 3096 |
24 | TraesCS7B01G015400 | chr2B | 723387778 | 723388365 | 587 | True | 647.000000 | 647 | 86.824000 | 7407 | 7987 | 1 | chr2B.!!$R1 | 580 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
445 | 454 | 0.105039 | GGTGGAGATGCCCTTACGAG | 59.895 | 60.000 | 0.00 | 0.00 | 34.97 | 4.18 | F |
1076 | 1310 | 0.039618 | GGGCCAACTGAAATCTGGGA | 59.960 | 55.000 | 4.39 | 0.00 | 0.00 | 4.37 | F |
1676 | 3751 | 0.109723 | TTTGTCCCTACCAGGTGCAC | 59.890 | 55.000 | 8.80 | 8.80 | 31.93 | 4.57 | F |
2327 | 4405 | 0.172127 | TGCAGCAAAAACGAAGCACA | 59.828 | 45.000 | 0.00 | 0.00 | 0.00 | 4.57 | F |
3142 | 5231 | 2.047844 | GCTGCTGTGCTCGGAGAA | 60.048 | 61.111 | 9.69 | 0.00 | 34.09 | 2.87 | F |
4587 | 7472 | 1.767088 | GGGTTCTTAGCCGGGTAAGAT | 59.233 | 52.381 | 41.48 | 4.26 | 38.53 | 2.40 | F |
5926 | 9951 | 1.002134 | CCCAACCGAGGCACTGAAT | 60.002 | 57.895 | 0.00 | 0.00 | 41.55 | 2.57 | F |
6019 | 10044 | 0.107508 | CCATCAGAGGCAACACGGAT | 60.108 | 55.000 | 0.00 | 0.00 | 42.18 | 4.18 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1561 | 1846 | 0.179161 | CGTAGAGGACCAGCAAGACG | 60.179 | 60.000 | 0.0 | 0.00 | 0.00 | 4.18 | R |
2725 | 4808 | 0.979665 | CAGGAGAAGCCCAGAACAGA | 59.020 | 55.000 | 0.0 | 0.00 | 37.37 | 3.41 | R |
3142 | 5231 | 0.537371 | CGCCTTCAGTTTTGGGGACT | 60.537 | 55.000 | 0.0 | 0.00 | 36.10 | 3.85 | R |
4138 | 7016 | 5.530171 | CCATGAATACCATCTGTCTCCTTTG | 59.470 | 44.000 | 0.0 | 0.00 | 31.94 | 2.77 | R |
5070 | 8096 | 4.570930 | AGAAACGATCTTCTCCCTCAAAC | 58.429 | 43.478 | 0.0 | 0.00 | 33.39 | 2.93 | R |
6005 | 10030 | 0.537188 | CACCTATCCGTGTTGCCTCT | 59.463 | 55.000 | 0.0 | 0.00 | 0.00 | 3.69 | R |
7756 | 14337 | 1.610086 | CCTTTGGCCCATGCTCCAA | 60.610 | 57.895 | 0.0 | 11.44 | 40.31 | 3.53 | R |
8181 | 14828 | 5.249420 | AGAGATAGCCCAAGAAACTTCAAC | 58.751 | 41.667 | 0.0 | 0.00 | 0.00 | 3.18 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
22 | 23 | 0.541764 | AGGATGAGGCGGAGAGGATC | 60.542 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
32 | 33 | 1.080839 | GAGAGGATCATCCGCGAGC | 60.081 | 63.158 | 8.23 | 0.00 | 41.52 | 5.03 |
35 | 36 | 3.032609 | GGATCATCCGCGAGCGTG | 61.033 | 66.667 | 8.23 | 9.05 | 37.81 | 5.34 |
65 | 66 | 1.380246 | GGGAAGCCATGCCATGACA | 60.380 | 57.895 | 6.18 | 0.00 | 39.85 | 3.58 |
69 | 70 | 1.607628 | GAAGCCATGCCATGACATCTC | 59.392 | 52.381 | 6.18 | 0.00 | 0.00 | 2.75 |
77 | 78 | 1.211457 | GCCATGACATCTCCACCTTCT | 59.789 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
82 | 83 | 1.817099 | CATCTCCACCTTCTGCCGC | 60.817 | 63.158 | 0.00 | 0.00 | 0.00 | 6.53 |
128 | 129 | 3.439540 | CCGGGTCGGGCAACAATG | 61.440 | 66.667 | 0.00 | 0.00 | 44.15 | 2.82 |
129 | 130 | 2.359354 | CGGGTCGGGCAACAATGA | 60.359 | 61.111 | 0.00 | 0.00 | 39.74 | 2.57 |
130 | 131 | 2.686816 | CGGGTCGGGCAACAATGAC | 61.687 | 63.158 | 0.00 | 0.00 | 39.74 | 3.06 |
132 | 133 | 1.586154 | GGGTCGGGCAACAATGACAG | 61.586 | 60.000 | 0.00 | 0.00 | 35.69 | 3.51 |
133 | 134 | 0.605319 | GGTCGGGCAACAATGACAGA | 60.605 | 55.000 | 0.00 | 0.00 | 36.34 | 3.41 |
134 | 135 | 0.798776 | GTCGGGCAACAATGACAGAG | 59.201 | 55.000 | 0.00 | 0.00 | 39.59 | 3.35 |
136 | 137 | 0.321564 | CGGGCAACAATGACAGAGGA | 60.322 | 55.000 | 0.00 | 0.00 | 35.69 | 3.71 |
137 | 138 | 1.457346 | GGGCAACAATGACAGAGGAG | 58.543 | 55.000 | 0.00 | 0.00 | 35.69 | 3.69 |
138 | 139 | 1.457346 | GGCAACAATGACAGAGGAGG | 58.543 | 55.000 | 0.00 | 0.00 | 33.41 | 4.30 |
139 | 140 | 1.003580 | GGCAACAATGACAGAGGAGGA | 59.996 | 52.381 | 0.00 | 0.00 | 33.41 | 3.71 |
140 | 141 | 2.354259 | GCAACAATGACAGAGGAGGAG | 58.646 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
141 | 142 | 2.354259 | CAACAATGACAGAGGAGGAGC | 58.646 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
142 | 143 | 0.908198 | ACAATGACAGAGGAGGAGCC | 59.092 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
143 | 144 | 0.179089 | CAATGACAGAGGAGGAGCCG | 60.179 | 60.000 | 0.00 | 0.00 | 43.43 | 5.52 |
144 | 145 | 1.965754 | AATGACAGAGGAGGAGCCGC | 61.966 | 60.000 | 0.00 | 0.00 | 43.43 | 6.53 |
145 | 146 | 3.844090 | GACAGAGGAGGAGCCGCC | 61.844 | 72.222 | 0.47 | 0.47 | 43.43 | 6.13 |
170 | 171 | 2.028190 | CCGGCATGAGCTACGAGG | 59.972 | 66.667 | 0.00 | 0.00 | 41.70 | 4.63 |
191 | 192 | 5.071370 | AGGTCACCGTGAAGTATAGGATAG | 58.929 | 45.833 | 1.88 | 0.00 | 0.00 | 2.08 |
192 | 193 | 4.826183 | GGTCACCGTGAAGTATAGGATAGT | 59.174 | 45.833 | 1.88 | 0.00 | 0.00 | 2.12 |
198 | 199 | 7.014038 | CACCGTGAAGTATAGGATAGTTTAGGT | 59.986 | 40.741 | 0.00 | 0.00 | 0.00 | 3.08 |
228 | 230 | 1.532437 | GGGTTTTTAGTTCACCGGACG | 59.468 | 52.381 | 9.46 | 0.00 | 0.00 | 4.79 |
233 | 235 | 2.267188 | TTAGTTCACCGGACGAATCG | 57.733 | 50.000 | 9.46 | 0.00 | 0.00 | 3.34 |
283 | 286 | 4.398549 | TCAATGAAATCCGTCGTGTTTC | 57.601 | 40.909 | 10.81 | 10.81 | 33.58 | 2.78 |
287 | 290 | 6.370442 | TCAATGAAATCCGTCGTGTTTCTATT | 59.630 | 34.615 | 15.91 | 12.13 | 33.99 | 1.73 |
290 | 293 | 7.837202 | TGAAATCCGTCGTGTTTCTATTAAT | 57.163 | 32.000 | 15.91 | 0.00 | 33.99 | 1.40 |
291 | 294 | 8.259049 | TGAAATCCGTCGTGTTTCTATTAATT | 57.741 | 30.769 | 15.91 | 0.00 | 33.99 | 1.40 |
294 | 297 | 9.902196 | AAATCCGTCGTGTTTCTATTAATTTTT | 57.098 | 25.926 | 0.00 | 0.00 | 0.00 | 1.94 |
312 | 315 | 4.993029 | TTTTTGTCCGTCCAGTTTGATT | 57.007 | 36.364 | 0.00 | 0.00 | 0.00 | 2.57 |
314 | 317 | 6.452494 | TTTTTGTCCGTCCAGTTTGATTAA | 57.548 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
315 | 318 | 6.452494 | TTTTGTCCGTCCAGTTTGATTAAA | 57.548 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
316 | 319 | 6.642707 | TTTGTCCGTCCAGTTTGATTAAAT | 57.357 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
317 | 320 | 6.642707 | TTGTCCGTCCAGTTTGATTAAATT | 57.357 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
318 | 321 | 6.642707 | TGTCCGTCCAGTTTGATTAAATTT | 57.357 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
319 | 322 | 6.674066 | TGTCCGTCCAGTTTGATTAAATTTC | 58.326 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
320 | 323 | 6.263392 | TGTCCGTCCAGTTTGATTAAATTTCA | 59.737 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
325 | 328 | 7.312899 | GTCCAGTTTGATTAAATTTCATCCGT | 58.687 | 34.615 | 9.35 | 0.00 | 0.00 | 4.69 |
343 | 346 | 4.667262 | TCCGTTTGATTTGAGTTGTTGTG | 58.333 | 39.130 | 0.00 | 0.00 | 0.00 | 3.33 |
355 | 358 | 9.691362 | ATTTGAGTTGTTGTGAAAATATACACC | 57.309 | 29.630 | 0.00 | 0.00 | 36.35 | 4.16 |
356 | 359 | 7.809546 | TGAGTTGTTGTGAAAATATACACCA | 57.190 | 32.000 | 0.00 | 0.00 | 36.35 | 4.17 |
357 | 360 | 7.644490 | TGAGTTGTTGTGAAAATATACACCAC | 58.356 | 34.615 | 0.00 | 0.00 | 36.35 | 4.16 |
360 | 363 | 9.515226 | AGTTGTTGTGAAAATATACACCACTAT | 57.485 | 29.630 | 0.00 | 0.00 | 34.97 | 2.12 |
362 | 365 | 8.275015 | TGTTGTGAAAATATACACCACTATGG | 57.725 | 34.615 | 0.00 | 0.00 | 45.02 | 2.74 |
363 | 366 | 6.935741 | TGTGAAAATATACACCACTATGGC | 57.064 | 37.500 | 0.00 | 0.00 | 42.67 | 4.40 |
365 | 368 | 6.542005 | TGTGAAAATATACACCACTATGGCTG | 59.458 | 38.462 | 0.00 | 0.00 | 42.67 | 4.85 |
366 | 369 | 6.765989 | GTGAAAATATACACCACTATGGCTGA | 59.234 | 38.462 | 0.00 | 0.00 | 42.67 | 4.26 |
367 | 370 | 7.282224 | GTGAAAATATACACCACTATGGCTGAA | 59.718 | 37.037 | 0.00 | 0.00 | 42.67 | 3.02 |
368 | 371 | 7.998383 | TGAAAATATACACCACTATGGCTGAAT | 59.002 | 33.333 | 0.00 | 0.00 | 42.67 | 2.57 |
370 | 373 | 2.425143 | ACACCACTATGGCTGAATGG | 57.575 | 50.000 | 0.00 | 0.00 | 42.67 | 3.16 |
371 | 374 | 1.635487 | ACACCACTATGGCTGAATGGT | 59.365 | 47.619 | 0.00 | 0.00 | 42.67 | 3.55 |
373 | 376 | 3.265737 | ACACCACTATGGCTGAATGGTTA | 59.734 | 43.478 | 0.00 | 0.00 | 42.67 | 2.85 |
374 | 377 | 4.079787 | ACACCACTATGGCTGAATGGTTAT | 60.080 | 41.667 | 0.00 | 0.00 | 42.67 | 1.89 |
375 | 378 | 4.516698 | CACCACTATGGCTGAATGGTTATC | 59.483 | 45.833 | 0.00 | 0.00 | 42.67 | 1.75 |
376 | 379 | 4.413520 | ACCACTATGGCTGAATGGTTATCT | 59.586 | 41.667 | 0.00 | 0.00 | 42.67 | 1.98 |
377 | 380 | 4.999950 | CCACTATGGCTGAATGGTTATCTC | 59.000 | 45.833 | 0.00 | 0.00 | 0.00 | 2.75 |
378 | 381 | 4.999950 | CACTATGGCTGAATGGTTATCTCC | 59.000 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
379 | 382 | 3.515602 | ATGGCTGAATGGTTATCTCCC | 57.484 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
380 | 383 | 1.140852 | TGGCTGAATGGTTATCTCCCG | 59.859 | 52.381 | 0.00 | 0.00 | 0.00 | 5.14 |
382 | 385 | 2.367567 | GGCTGAATGGTTATCTCCCGTA | 59.632 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
383 | 386 | 3.008049 | GGCTGAATGGTTATCTCCCGTAT | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
385 | 388 | 5.063880 | GCTGAATGGTTATCTCCCGTATTT | 58.936 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
386 | 389 | 5.049405 | GCTGAATGGTTATCTCCCGTATTTG | 60.049 | 44.000 | 0.00 | 0.00 | 0.00 | 2.32 |
392 | 397 | 4.269363 | GGTTATCTCCCGTATTTGTGTTCG | 59.731 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
396 | 401 | 1.015085 | CCCGTATTTGTGTTCGCGGA | 61.015 | 55.000 | 6.13 | 0.00 | 41.45 | 5.54 |
399 | 404 | 1.656594 | CGTATTTGTGTTCGCGGATGA | 59.343 | 47.619 | 6.13 | 0.00 | 0.00 | 2.92 |
401 | 406 | 2.611974 | ATTTGTGTTCGCGGATGAAC | 57.388 | 45.000 | 6.13 | 3.50 | 46.63 | 3.18 |
410 | 415 | 4.143333 | CGGATGAACGCGGGAGGT | 62.143 | 66.667 | 12.47 | 0.00 | 0.00 | 3.85 |
411 | 416 | 2.777972 | CGGATGAACGCGGGAGGTA | 61.778 | 63.158 | 12.47 | 0.00 | 0.00 | 3.08 |
416 | 421 | 3.460103 | GATGAACGCGGGAGGTATTTTA | 58.540 | 45.455 | 12.47 | 0.00 | 0.00 | 1.52 |
423 | 428 | 2.282407 | CGGGAGGTATTTTACGGGTTG | 58.718 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
426 | 431 | 1.667212 | GAGGTATTTTACGGGTTGCCG | 59.333 | 52.381 | 0.00 | 0.00 | 39.31 | 5.69 |
427 | 432 | 0.734309 | GGTATTTTACGGGTTGCCGG | 59.266 | 55.000 | 0.00 | 0.00 | 37.53 | 6.13 |
430 | 435 | 1.245376 | ATTTTACGGGTTGCCGGTGG | 61.245 | 55.000 | 1.90 | 0.00 | 37.62 | 4.61 |
432 | 437 | 2.734948 | TTTACGGGTTGCCGGTGGAG | 62.735 | 60.000 | 1.90 | 0.00 | 37.62 | 3.86 |
435 | 440 | 2.438434 | GGGTTGCCGGTGGAGATG | 60.438 | 66.667 | 1.90 | 0.00 | 0.00 | 2.90 |
445 | 454 | 0.105039 | GGTGGAGATGCCCTTACGAG | 59.895 | 60.000 | 0.00 | 0.00 | 34.97 | 4.18 |
460 | 469 | 1.232621 | ACGAGCCGGGCACTTTAAAC | 61.233 | 55.000 | 23.09 | 1.14 | 0.00 | 2.01 |
485 | 502 | 5.485353 | AGACAAAGAGTATCAATGGGACTGA | 59.515 | 40.000 | 0.00 | 0.00 | 37.82 | 3.41 |
572 | 594 | 3.000925 | CACACGACGTTAACAGAGCTTTT | 59.999 | 43.478 | 6.39 | 0.00 | 0.00 | 2.27 |
640 | 662 | 4.129737 | GGCGCTGCTGACTACCGA | 62.130 | 66.667 | 7.64 | 0.00 | 0.00 | 4.69 |
642 | 664 | 2.580867 | CGCTGCTGACTACCGAGC | 60.581 | 66.667 | 0.00 | 0.00 | 35.65 | 5.03 |
643 | 665 | 2.573869 | GCTGCTGACTACCGAGCA | 59.426 | 61.111 | 0.00 | 0.00 | 42.94 | 4.26 |
645 | 667 | 2.573869 | TGCTGACTACCGAGCAGC | 59.426 | 61.111 | 0.00 | 0.00 | 45.42 | 5.25 |
646 | 668 | 2.573869 | GCTGACTACCGAGCAGCA | 59.426 | 61.111 | 8.98 | 0.00 | 44.98 | 4.41 |
648 | 670 | 1.886585 | CTGACTACCGAGCAGCAGT | 59.113 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
710 | 786 | 3.081804 | CTCTTTGAAACATAACCCGGCT | 58.918 | 45.455 | 0.00 | 0.00 | 0.00 | 5.52 |
776 | 934 | 2.362077 | CCTTTGGGTTGGTTGACTCTTG | 59.638 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
777 | 935 | 1.398692 | TTGGGTTGGTTGACTCTTGC | 58.601 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
809 | 976 | 1.079503 | GCACTGAGATTTCCGTGTCC | 58.920 | 55.000 | 9.11 | 0.00 | 39.77 | 4.02 |
820 | 987 | 2.933834 | CGTGTCCCCCTTCCCCTT | 60.934 | 66.667 | 0.00 | 0.00 | 0.00 | 3.95 |
821 | 988 | 2.967946 | CGTGTCCCCCTTCCCCTTC | 61.968 | 68.421 | 0.00 | 0.00 | 0.00 | 3.46 |
822 | 989 | 2.204244 | TGTCCCCCTTCCCCTTCC | 60.204 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
837 | 1007 | 4.349930 | TCCCCTTCCCCTAGAATAATTTCG | 59.650 | 45.833 | 0.00 | 0.00 | 36.93 | 3.46 |
921 | 1112 | 2.362397 | TGTCTGCGTCTCTTCTTCTGTT | 59.638 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
933 | 1135 | 7.496263 | GTCTCTTCTTCTGTTCTAACCTGTTTT | 59.504 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
934 | 1136 | 8.047310 | TCTCTTCTTCTGTTCTAACCTGTTTTT | 58.953 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
1058 | 1292 | 1.406180 | TCATGCTGCATCATTTTCGGG | 59.594 | 47.619 | 13.10 | 0.00 | 0.00 | 5.14 |
1059 | 1293 | 0.748450 | ATGCTGCATCATTTTCGGGG | 59.252 | 50.000 | 9.81 | 0.00 | 0.00 | 5.73 |
1060 | 1294 | 1.227060 | GCTGCATCATTTTCGGGGC | 60.227 | 57.895 | 0.00 | 0.00 | 0.00 | 5.80 |
1062 | 1296 | 1.304796 | TGCATCATTTTCGGGGCCA | 60.305 | 52.632 | 4.39 | 0.00 | 0.00 | 5.36 |
1064 | 1298 | 0.460109 | GCATCATTTTCGGGGCCAAC | 60.460 | 55.000 | 4.39 | 0.00 | 0.00 | 3.77 |
1065 | 1299 | 1.185315 | CATCATTTTCGGGGCCAACT | 58.815 | 50.000 | 4.39 | 0.00 | 0.00 | 3.16 |
1066 | 1300 | 1.135024 | CATCATTTTCGGGGCCAACTG | 60.135 | 52.381 | 4.39 | 0.00 | 0.00 | 3.16 |
1067 | 1301 | 0.111446 | TCATTTTCGGGGCCAACTGA | 59.889 | 50.000 | 4.39 | 0.00 | 0.00 | 3.41 |
1070 | 1304 | 1.710816 | TTTTCGGGGCCAACTGAAAT | 58.289 | 45.000 | 14.52 | 0.00 | 43.19 | 2.17 |
1071 | 1305 | 1.253100 | TTTCGGGGCCAACTGAAATC | 58.747 | 50.000 | 4.39 | 0.00 | 39.96 | 2.17 |
1072 | 1306 | 0.404040 | TTCGGGGCCAACTGAAATCT | 59.596 | 50.000 | 4.39 | 0.00 | 33.04 | 2.40 |
1073 | 1307 | 0.322456 | TCGGGGCCAACTGAAATCTG | 60.322 | 55.000 | 4.39 | 0.00 | 0.00 | 2.90 |
1074 | 1308 | 1.315257 | CGGGGCCAACTGAAATCTGG | 61.315 | 60.000 | 4.39 | 0.00 | 0.00 | 3.86 |
1075 | 1309 | 0.972471 | GGGGCCAACTGAAATCTGGG | 60.972 | 60.000 | 4.39 | 0.00 | 0.00 | 4.45 |
1076 | 1310 | 0.039618 | GGGCCAACTGAAATCTGGGA | 59.960 | 55.000 | 4.39 | 0.00 | 0.00 | 4.37 |
1077 | 1311 | 1.467920 | GGCCAACTGAAATCTGGGAG | 58.532 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1078 | 1312 | 1.272147 | GGCCAACTGAAATCTGGGAGT | 60.272 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
1079 | 1313 | 1.815003 | GCCAACTGAAATCTGGGAGTG | 59.185 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
1080 | 1314 | 1.815003 | CCAACTGAAATCTGGGAGTGC | 59.185 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
1081 | 1315 | 1.815003 | CAACTGAAATCTGGGAGTGCC | 59.185 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
1096 | 1353 | 3.350833 | GAGTGCCATCTGACTCCAAAAT | 58.649 | 45.455 | 0.00 | 0.00 | 33.76 | 1.82 |
1325 | 1588 | 4.724602 | GGCAGCTCGTCACGCTCA | 62.725 | 66.667 | 0.00 | 0.00 | 35.07 | 4.26 |
1326 | 1589 | 3.177920 | GCAGCTCGTCACGCTCAG | 61.178 | 66.667 | 0.00 | 0.00 | 35.07 | 3.35 |
1327 | 1590 | 2.256764 | CAGCTCGTCACGCTCAGT | 59.743 | 61.111 | 0.00 | 0.00 | 35.07 | 3.41 |
1328 | 1591 | 1.799519 | CAGCTCGTCACGCTCAGTC | 60.800 | 63.158 | 0.00 | 0.00 | 35.07 | 3.51 |
1359 | 1637 | 4.353437 | GCACTTGGCTGCTGTGGC | 62.353 | 66.667 | 17.22 | 5.86 | 40.25 | 5.01 |
1400 | 1678 | 1.632965 | GGTTTATCTCGGGCTGGGGT | 61.633 | 60.000 | 0.00 | 0.00 | 0.00 | 4.95 |
1429 | 1707 | 2.038557 | GCTGGGGAGTAACTTCAGTCAA | 59.961 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1438 | 1716 | 4.926238 | AGTAACTTCAGTCAAGATGCTTCG | 59.074 | 41.667 | 0.00 | 0.00 | 35.82 | 3.79 |
1449 | 1727 | 2.433436 | AGATGCTTCGGTTGTTTACCC | 58.567 | 47.619 | 0.00 | 0.00 | 44.70 | 3.69 |
1450 | 1728 | 1.471287 | GATGCTTCGGTTGTTTACCCC | 59.529 | 52.381 | 0.00 | 0.00 | 44.70 | 4.95 |
1521 | 1806 | 0.886563 | AGCTTGGCTTTCAGCATCAC | 59.113 | 50.000 | 0.00 | 0.00 | 44.75 | 3.06 |
1561 | 1846 | 1.731709 | GCATTTGTTCGATTTTGGCCC | 59.268 | 47.619 | 0.00 | 0.00 | 0.00 | 5.80 |
1593 | 1878 | 2.035193 | TCCTCTACGCAGCATTCATCTC | 59.965 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
1638 | 1923 | 1.297456 | GCAGAGAAGGTGCTGACTGC | 61.297 | 60.000 | 0.00 | 0.00 | 42.44 | 4.40 |
1676 | 3751 | 0.109723 | TTTGTCCCTACCAGGTGCAC | 59.890 | 55.000 | 8.80 | 8.80 | 31.93 | 4.57 |
1735 | 3810 | 1.488393 | GAAGAGGGTCATGGAGGAAGG | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 3.46 |
1766 | 3844 | 0.676782 | ATACAAGCCCCTCAACACGC | 60.677 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1875 | 3953 | 4.633565 | GTGGTTGAATCCTCTCATGAAGAC | 59.366 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
1880 | 3958 | 1.144936 | CCTCTCATGAAGACGGGCC | 59.855 | 63.158 | 0.00 | 0.00 | 0.00 | 5.80 |
2327 | 4405 | 0.172127 | TGCAGCAAAAACGAAGCACA | 59.828 | 45.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2653 | 4731 | 2.755952 | AAGGCCACTTCAAGAAGGTT | 57.244 | 45.000 | 5.01 | 0.00 | 42.53 | 3.50 |
2725 | 4808 | 3.237268 | TGGAGGGCATACAACAGTTTT | 57.763 | 42.857 | 0.00 | 0.00 | 0.00 | 2.43 |
2979 | 5062 | 6.268387 | AGGAAGAAATATTATGGTGCCATTGG | 59.732 | 38.462 | 9.19 | 0.00 | 37.82 | 3.16 |
3142 | 5231 | 2.047844 | GCTGCTGTGCTCGGAGAA | 60.048 | 61.111 | 9.69 | 0.00 | 34.09 | 2.87 |
3183 | 5275 | 6.369615 | GGCGTGGTATGTTTTCTTCTTAGTAA | 59.630 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
3226 | 5619 | 6.630444 | AATAGCTGCCATACTCAGAATTTG | 57.370 | 37.500 | 0.00 | 0.00 | 33.54 | 2.32 |
4026 | 6904 | 3.197766 | TCGGTCTGCACCTTATCAAGATT | 59.802 | 43.478 | 0.00 | 0.00 | 41.17 | 2.40 |
4138 | 7016 | 9.050601 | CCATCAAAGATCTAAGGAAGTATCAAC | 57.949 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
4587 | 7472 | 1.767088 | GGGTTCTTAGCCGGGTAAGAT | 59.233 | 52.381 | 41.48 | 4.26 | 38.53 | 2.40 |
4633 | 7543 | 9.778741 | ACAACAAGTTACAGAGATTTTCTCATA | 57.221 | 29.630 | 7.24 | 0.00 | 45.73 | 2.15 |
5070 | 8096 | 1.405121 | GGGGCTATAACGATAAGGGCG | 60.405 | 57.143 | 0.00 | 0.00 | 0.00 | 6.13 |
5249 | 8275 | 6.931840 | GCTCTTCTTCCTCAAGAGACTTTTAA | 59.068 | 38.462 | 12.60 | 0.00 | 46.88 | 1.52 |
5509 | 9340 | 5.912955 | AGTTTTTATTGCGGAGAAACTTTCG | 59.087 | 36.000 | 0.00 | 0.00 | 37.27 | 3.46 |
5532 | 9363 | 5.811100 | CGATCTATTCATCATCTGTCATGGG | 59.189 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
5585 | 9416 | 1.125093 | AACCAGGTCCGTGGATCACA | 61.125 | 55.000 | 12.65 | 0.00 | 40.44 | 3.58 |
5681 | 9513 | 3.662247 | ACAGTGTTGTAGTAGCAGTCC | 57.338 | 47.619 | 0.00 | 0.00 | 35.25 | 3.85 |
5832 | 9854 | 2.680352 | ACATGCCCTCCGACGACT | 60.680 | 61.111 | 0.00 | 0.00 | 0.00 | 4.18 |
5890 | 9912 | 6.144625 | GGGAGATATTATTCCTACTAGGGGG | 58.855 | 48.000 | 2.04 | 0.00 | 35.59 | 5.40 |
5920 | 9945 | 4.329545 | GCAGTCCCAACCGAGGCA | 62.330 | 66.667 | 0.00 | 0.00 | 0.00 | 4.75 |
5926 | 9951 | 1.002134 | CCCAACCGAGGCACTGAAT | 60.002 | 57.895 | 0.00 | 0.00 | 41.55 | 2.57 |
6019 | 10044 | 0.107508 | CCATCAGAGGCAACACGGAT | 60.108 | 55.000 | 0.00 | 0.00 | 42.18 | 4.18 |
6020 | 10045 | 1.138859 | CCATCAGAGGCAACACGGATA | 59.861 | 52.381 | 0.00 | 0.00 | 39.77 | 2.59 |
6124 | 10149 | 8.807581 | CCTAAAGTGTGAAAAGTTTGATTGAAC | 58.192 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
6140 | 10165 | 5.122239 | TGATTGAACGCCTTCTAGAATGTTG | 59.878 | 40.000 | 17.53 | 10.10 | 0.00 | 3.33 |
6315 | 10509 | 6.712095 | TGCAATTCTAGTCCTAATGCTTATGG | 59.288 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
6450 | 10663 | 4.501071 | TGTCCTATGGTCTTTCGCTAAAC | 58.499 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
6632 | 10845 | 7.285401 | GGAGATTAGGCATTTGAAGGTAATCAA | 59.715 | 37.037 | 0.00 | 0.00 | 37.53 | 2.57 |
6729 | 10945 | 8.856153 | TGTGCTGGACTTTTATTTAACAGATA | 57.144 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
6910 | 11126 | 4.138290 | AGACTCTGTGGATATCAGTACGG | 58.862 | 47.826 | 4.83 | 5.87 | 34.86 | 4.02 |
6991 | 11207 | 9.802039 | TTTTTCAGGGTACAATAAGATACAACT | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
7185 | 12927 | 4.913335 | ACTATGGCAATTCAGCTTGATG | 57.087 | 40.909 | 0.00 | 0.00 | 34.17 | 3.07 |
7186 | 12928 | 4.529897 | ACTATGGCAATTCAGCTTGATGA | 58.470 | 39.130 | 0.00 | 0.00 | 34.17 | 2.92 |
7187 | 12929 | 5.138276 | ACTATGGCAATTCAGCTTGATGAT | 58.862 | 37.500 | 0.00 | 0.00 | 34.17 | 2.45 |
7191 | 12933 | 4.098349 | TGGCAATTCAGCTTGATGATTACC | 59.902 | 41.667 | 0.00 | 0.00 | 34.17 | 2.85 |
7202 | 12944 | 9.445878 | CAGCTTGATGATTACCTTGACATATAT | 57.554 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
7443 | 13996 | 4.099266 | TGTTATTGTGCTTGCAGGTTCTTT | 59.901 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
7545 | 14099 | 9.042450 | TCTATACTTTGGTTTCTGGAGTTCATA | 57.958 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
7609 | 14175 | 9.912634 | TCATTTCAAGAATTCAAAATAGGTGTC | 57.087 | 29.630 | 8.44 | 0.00 | 0.00 | 3.67 |
7756 | 14337 | 3.642141 | AGTTGTGGAAAGTGGGTCAAAT | 58.358 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
7999 | 14580 | 0.383949 | TGTTTCTCTTGCCGGCAAAC | 59.616 | 50.000 | 38.96 | 32.25 | 35.33 | 2.93 |
8210 | 14857 | 5.131809 | AGTTTCTTGGGCTATCTCTTGCTAT | 59.868 | 40.000 | 0.00 | 0.00 | 0.00 | 2.97 |
8243 | 14890 | 0.107214 | CAGTATCATGGTGGGCCGTT | 60.107 | 55.000 | 0.00 | 0.00 | 37.67 | 4.44 |
8277 | 14924 | 5.415701 | TGGAATTGATGAAGGTAAACAGAGC | 59.584 | 40.000 | 0.00 | 0.00 | 0.00 | 4.09 |
8286 | 14933 | 4.479786 | AGGTAAACAGAGCAGATTCCTC | 57.520 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
8309 | 14956 | 4.337264 | AGATTTCCTTGCCCCAGTAAAT | 57.663 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
8362 | 15009 | 4.106197 | CGTACTGAACTGTAAGGCTCATC | 58.894 | 47.826 | 0.00 | 0.00 | 39.30 | 2.92 |
8363 | 15010 | 4.380550 | CGTACTGAACTGTAAGGCTCATCA | 60.381 | 45.833 | 0.00 | 0.00 | 39.30 | 3.07 |
8410 | 15060 | 3.811497 | TCATCAAACTTGAGCTGTGTCTG | 59.189 | 43.478 | 0.00 | 0.00 | 41.08 | 3.51 |
8418 | 15068 | 2.483876 | TGAGCTGTGTCTGCTTACAAC | 58.516 | 47.619 | 0.00 | 0.00 | 38.70 | 3.32 |
8419 | 15069 | 1.801178 | GAGCTGTGTCTGCTTACAACC | 59.199 | 52.381 | 0.00 | 0.00 | 38.70 | 3.77 |
8420 | 15070 | 1.140852 | AGCTGTGTCTGCTTACAACCA | 59.859 | 47.619 | 0.00 | 0.00 | 35.17 | 3.67 |
8426 | 15115 | 4.994852 | TGTGTCTGCTTACAACCATACTTC | 59.005 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
8427 | 15116 | 4.994852 | GTGTCTGCTTACAACCATACTTCA | 59.005 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
8440 | 15129 | 3.863424 | CCATACTTCAGCGTCGTTTATGT | 59.137 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
8452 | 15146 | 4.491942 | CGTCGTTTATGTTGAATGCATCAC | 59.508 | 41.667 | 0.00 | 0.00 | 37.92 | 3.06 |
8458 | 15152 | 3.745332 | TGTTGAATGCATCACGATGAC | 57.255 | 42.857 | 11.21 | 3.33 | 41.20 | 3.06 |
8486 | 15180 | 2.031857 | TGCGATTGGTTTTCGGTTGTAC | 60.032 | 45.455 | 0.00 | 0.00 | 37.10 | 2.90 |
8487 | 15181 | 2.224784 | GCGATTGGTTTTCGGTTGTACT | 59.775 | 45.455 | 0.00 | 0.00 | 37.10 | 2.73 |
8488 | 15182 | 3.666111 | GCGATTGGTTTTCGGTTGTACTC | 60.666 | 47.826 | 0.00 | 0.00 | 37.10 | 2.59 |
8489 | 15183 | 3.120442 | CGATTGGTTTTCGGTTGTACTCC | 60.120 | 47.826 | 0.00 | 0.00 | 33.05 | 3.85 |
8492 | 15186 | 2.224354 | TGGTTTTCGGTTGTACTCCCTC | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
8493 | 15187 | 2.420642 | GTTTTCGGTTGTACTCCCTCC | 58.579 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
8495 | 15189 | 0.540365 | TTCGGTTGTACTCCCTCCGT | 60.540 | 55.000 | 0.00 | 0.00 | 41.58 | 4.69 |
8496 | 15190 | 0.962356 | TCGGTTGTACTCCCTCCGTC | 60.962 | 60.000 | 0.00 | 0.00 | 41.58 | 4.79 |
8497 | 15191 | 1.895966 | GGTTGTACTCCCTCCGTCC | 59.104 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
8500 | 15194 | 2.664015 | GTTGTACTCCCTCCGTCCTAT | 58.336 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
8501 | 15195 | 3.435601 | GGTTGTACTCCCTCCGTCCTATA | 60.436 | 52.174 | 0.00 | 0.00 | 0.00 | 1.31 |
8502 | 15196 | 4.210331 | GTTGTACTCCCTCCGTCCTATAA | 58.790 | 47.826 | 0.00 | 0.00 | 0.00 | 0.98 |
8503 | 15197 | 4.736611 | TGTACTCCCTCCGTCCTATAAT | 57.263 | 45.455 | 0.00 | 0.00 | 0.00 | 1.28 |
8504 | 15198 | 5.848286 | TGTACTCCCTCCGTCCTATAATA | 57.152 | 43.478 | 0.00 | 0.00 | 0.00 | 0.98 |
8505 | 15199 | 6.398655 | TGTACTCCCTCCGTCCTATAATAT | 57.601 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
8506 | 15200 | 7.515004 | TGTACTCCCTCCGTCCTATAATATA | 57.485 | 40.000 | 0.00 | 0.00 | 0.00 | 0.86 |
8507 | 15201 | 7.932134 | TGTACTCCCTCCGTCCTATAATATAA | 58.068 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
8508 | 15202 | 8.051535 | TGTACTCCCTCCGTCCTATAATATAAG | 58.948 | 40.741 | 0.00 | 0.00 | 0.00 | 1.73 |
8509 | 15203 | 7.281366 | ACTCCCTCCGTCCTATAATATAAGA | 57.719 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
8510 | 15204 | 7.706674 | ACTCCCTCCGTCCTATAATATAAGAA | 58.293 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
8511 | 15205 | 7.614974 | ACTCCCTCCGTCCTATAATATAAGAAC | 59.385 | 40.741 | 0.00 | 0.00 | 0.00 | 3.01 |
8512 | 15206 | 6.600822 | TCCCTCCGTCCTATAATATAAGAACG | 59.399 | 42.308 | 0.00 | 0.00 | 0.00 | 3.95 |
8513 | 15207 | 6.376581 | CCCTCCGTCCTATAATATAAGAACGT | 59.623 | 42.308 | 0.00 | 0.00 | 0.00 | 3.99 |
8514 | 15208 | 7.094032 | CCCTCCGTCCTATAATATAAGAACGTT | 60.094 | 40.741 | 0.00 | 0.00 | 0.00 | 3.99 |
8515 | 15209 | 8.302438 | CCTCCGTCCTATAATATAAGAACGTTT | 58.698 | 37.037 | 0.46 | 0.00 | 0.00 | 3.60 |
8516 | 15210 | 9.688592 | CTCCGTCCTATAATATAAGAACGTTTT | 57.311 | 33.333 | 0.46 | 0.00 | 0.00 | 2.43 |
8530 | 15224 | 7.506296 | AAGAACGTTTTTGAAGCTAAAACAG | 57.494 | 32.000 | 18.63 | 14.36 | 42.68 | 3.16 |
8531 | 15225 | 6.617879 | AGAACGTTTTTGAAGCTAAAACAGT | 58.382 | 32.000 | 18.63 | 14.81 | 42.68 | 3.55 |
8532 | 15226 | 7.088272 | AGAACGTTTTTGAAGCTAAAACAGTT | 58.912 | 30.769 | 20.58 | 20.58 | 42.68 | 3.16 |
8533 | 15227 | 7.597369 | AGAACGTTTTTGAAGCTAAAACAGTTT | 59.403 | 29.630 | 20.97 | 13.22 | 42.68 | 2.66 |
8534 | 15228 | 7.044589 | ACGTTTTTGAAGCTAAAACAGTTTG | 57.955 | 32.000 | 18.63 | 8.16 | 42.68 | 2.93 |
8535 | 15229 | 6.864165 | ACGTTTTTGAAGCTAAAACAGTTTGA | 59.136 | 30.769 | 18.63 | 0.00 | 42.68 | 2.69 |
8536 | 15230 | 7.382759 | ACGTTTTTGAAGCTAAAACAGTTTGAA | 59.617 | 29.630 | 18.63 | 0.00 | 42.68 | 2.69 |
8537 | 15231 | 8.217778 | CGTTTTTGAAGCTAAAACAGTTTGAAA | 58.782 | 29.630 | 18.63 | 0.00 | 42.68 | 2.69 |
8538 | 15232 | 9.871299 | GTTTTTGAAGCTAAAACAGTTTGAAAA | 57.129 | 25.926 | 15.33 | 0.00 | 42.31 | 2.29 |
8540 | 15234 | 9.871299 | TTTTGAAGCTAAAACAGTTTGAAAAAC | 57.129 | 25.926 | 0.00 | 0.00 | 37.52 | 2.43 |
8541 | 15235 | 7.271936 | TGAAGCTAAAACAGTTTGAAAAACG | 57.728 | 32.000 | 0.00 | 0.00 | 0.00 | 3.60 |
8542 | 15236 | 6.864165 | TGAAGCTAAAACAGTTTGAAAAACGT | 59.136 | 30.769 | 0.00 | 0.00 | 0.00 | 3.99 |
8543 | 15237 | 7.382759 | TGAAGCTAAAACAGTTTGAAAAACGTT | 59.617 | 29.630 | 0.00 | 0.00 | 0.00 | 3.99 |
8544 | 15238 | 7.646446 | AGCTAAAACAGTTTGAAAAACGTTT | 57.354 | 28.000 | 7.96 | 7.96 | 32.61 | 3.60 |
8545 | 15239 | 8.078959 | AGCTAAAACAGTTTGAAAAACGTTTT | 57.921 | 26.923 | 20.26 | 20.26 | 38.71 | 2.43 |
8546 | 15240 | 8.552865 | AGCTAAAACAGTTTGAAAAACGTTTTT | 58.447 | 25.926 | 32.90 | 32.90 | 42.60 | 1.94 |
8547 | 15241 | 9.794653 | GCTAAAACAGTTTGAAAAACGTTTTTA | 57.205 | 25.926 | 32.57 | 19.26 | 40.21 | 1.52 |
8563 | 15257 | 7.951530 | ACGTTTTTATATTATGGTACGGAGG | 57.048 | 36.000 | 0.00 | 0.00 | 32.54 | 4.30 |
8564 | 15258 | 6.930722 | ACGTTTTTATATTATGGTACGGAGGG | 59.069 | 38.462 | 0.00 | 0.00 | 32.54 | 4.30 |
8565 | 15259 | 7.153985 | CGTTTTTATATTATGGTACGGAGGGA | 58.846 | 38.462 | 0.00 | 0.00 | 0.00 | 4.20 |
8566 | 15260 | 7.330208 | CGTTTTTATATTATGGTACGGAGGGAG | 59.670 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
8567 | 15261 | 7.860649 | TTTTATATTATGGTACGGAGGGAGT | 57.139 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
8568 | 15262 | 8.954834 | TTTTATATTATGGTACGGAGGGAGTA | 57.045 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
8569 | 15263 | 8.585471 | TTTATATTATGGTACGGAGGGAGTAG | 57.415 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
8570 | 15264 | 3.959495 | TTATGGTACGGAGGGAGTAGT | 57.041 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
8571 | 15265 | 2.842645 | ATGGTACGGAGGGAGTAGTT | 57.157 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
8572 | 15266 | 2.134789 | TGGTACGGAGGGAGTAGTTC | 57.865 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
8573 | 15267 | 1.637553 | TGGTACGGAGGGAGTAGTTCT | 59.362 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
8574 | 15268 | 2.042162 | TGGTACGGAGGGAGTAGTTCTT | 59.958 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
8575 | 15269 | 3.266772 | TGGTACGGAGGGAGTAGTTCTTA | 59.733 | 47.826 | 0.00 | 0.00 | 0.00 | 2.10 |
8576 | 15270 | 4.263905 | TGGTACGGAGGGAGTAGTTCTTAA | 60.264 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
8577 | 15271 | 4.097135 | GGTACGGAGGGAGTAGTTCTTAAC | 59.903 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
8578 | 15272 | 3.095332 | ACGGAGGGAGTAGTTCTTAACC | 58.905 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
8579 | 15273 | 3.094572 | CGGAGGGAGTAGTTCTTAACCA | 58.905 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
8580 | 15274 | 3.119209 | CGGAGGGAGTAGTTCTTAACCAC | 60.119 | 52.174 | 0.00 | 0.00 | 0.00 | 4.16 |
8581 | 15275 | 3.836562 | GGAGGGAGTAGTTCTTAACCACA | 59.163 | 47.826 | 0.00 | 0.00 | 0.00 | 4.17 |
8582 | 15276 | 4.285260 | GGAGGGAGTAGTTCTTAACCACAA | 59.715 | 45.833 | 0.00 | 0.00 | 0.00 | 3.33 |
8583 | 15277 | 5.221783 | GGAGGGAGTAGTTCTTAACCACAAA | 60.222 | 44.000 | 0.00 | 0.00 | 0.00 | 2.83 |
8584 | 15278 | 6.256643 | AGGGAGTAGTTCTTAACCACAAAA | 57.743 | 37.500 | 0.00 | 0.00 | 0.00 | 2.44 |
8585 | 15279 | 6.296803 | AGGGAGTAGTTCTTAACCACAAAAG | 58.703 | 40.000 | 0.00 | 0.00 | 0.00 | 2.27 |
8586 | 15280 | 6.100714 | AGGGAGTAGTTCTTAACCACAAAAGA | 59.899 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
8587 | 15281 | 6.769341 | GGGAGTAGTTCTTAACCACAAAAGAA | 59.231 | 38.462 | 0.00 | 0.00 | 38.93 | 2.52 |
8592 | 15286 | 4.545823 | TCTTAACCACAAAAGAACTGCG | 57.454 | 40.909 | 0.00 | 0.00 | 0.00 | 5.18 |
8593 | 15287 | 3.314080 | TCTTAACCACAAAAGAACTGCGG | 59.686 | 43.478 | 0.00 | 0.00 | 0.00 | 5.69 |
8594 | 15288 | 0.744281 | AACCACAAAAGAACTGCGGG | 59.256 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
8595 | 15289 | 0.106918 | ACCACAAAAGAACTGCGGGA | 60.107 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
8596 | 15290 | 1.247567 | CCACAAAAGAACTGCGGGAT | 58.752 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
8597 | 15291 | 1.613437 | CCACAAAAGAACTGCGGGATT | 59.387 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
8598 | 15292 | 2.607771 | CCACAAAAGAACTGCGGGATTG | 60.608 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
8599 | 15293 | 1.000274 | ACAAAAGAACTGCGGGATTGC | 60.000 | 47.619 | 0.00 | 0.00 | 0.00 | 3.56 |
8600 | 15294 | 1.000385 | CAAAAGAACTGCGGGATTGCA | 60.000 | 47.619 | 0.00 | 0.00 | 43.95 | 4.08 |
8606 | 15300 | 4.545929 | TGCGGGATTGCAGATCTG | 57.454 | 55.556 | 18.84 | 18.84 | 40.62 | 2.90 |
8607 | 15301 | 1.906995 | TGCGGGATTGCAGATCTGA | 59.093 | 52.632 | 27.04 | 6.75 | 40.62 | 3.27 |
8608 | 15302 | 0.252761 | TGCGGGATTGCAGATCTGAA | 59.747 | 50.000 | 27.04 | 14.12 | 40.62 | 3.02 |
8609 | 15303 | 0.942962 | GCGGGATTGCAGATCTGAAG | 59.057 | 55.000 | 27.04 | 4.66 | 34.15 | 3.02 |
8610 | 15304 | 1.745141 | GCGGGATTGCAGATCTGAAGT | 60.745 | 52.381 | 27.04 | 13.30 | 34.15 | 3.01 |
8611 | 15305 | 2.208431 | CGGGATTGCAGATCTGAAGTC | 58.792 | 52.381 | 27.04 | 21.25 | 0.00 | 3.01 |
8612 | 15306 | 2.570135 | GGGATTGCAGATCTGAAGTCC | 58.430 | 52.381 | 29.37 | 29.37 | 0.00 | 3.85 |
8613 | 15307 | 2.570135 | GGATTGCAGATCTGAAGTCCC | 58.430 | 52.381 | 27.79 | 15.59 | 0.00 | 4.46 |
8614 | 15308 | 2.092753 | GGATTGCAGATCTGAAGTCCCA | 60.093 | 50.000 | 27.79 | 12.98 | 0.00 | 4.37 |
8615 | 15309 | 3.434739 | GGATTGCAGATCTGAAGTCCCAT | 60.435 | 47.826 | 27.79 | 9.02 | 0.00 | 4.00 |
8616 | 15310 | 3.726557 | TTGCAGATCTGAAGTCCCATT | 57.273 | 42.857 | 27.04 | 0.00 | 0.00 | 3.16 |
8617 | 15311 | 3.726557 | TGCAGATCTGAAGTCCCATTT | 57.273 | 42.857 | 27.04 | 0.00 | 0.00 | 2.32 |
8618 | 15312 | 4.842531 | TGCAGATCTGAAGTCCCATTTA | 57.157 | 40.909 | 27.04 | 0.00 | 0.00 | 1.40 |
8619 | 15313 | 4.774124 | TGCAGATCTGAAGTCCCATTTAG | 58.226 | 43.478 | 27.04 | 0.00 | 0.00 | 1.85 |
8620 | 15314 | 3.563390 | GCAGATCTGAAGTCCCATTTAGC | 59.437 | 47.826 | 27.04 | 1.33 | 0.00 | 3.09 |
8621 | 15315 | 4.133078 | CAGATCTGAAGTCCCATTTAGCC | 58.867 | 47.826 | 18.34 | 0.00 | 0.00 | 3.93 |
8622 | 15316 | 4.043596 | AGATCTGAAGTCCCATTTAGCCT | 58.956 | 43.478 | 0.00 | 0.00 | 0.00 | 4.58 |
8623 | 15317 | 4.476479 | AGATCTGAAGTCCCATTTAGCCTT | 59.524 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
8624 | 15318 | 5.667626 | AGATCTGAAGTCCCATTTAGCCTTA | 59.332 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
8625 | 15319 | 5.099042 | TCTGAAGTCCCATTTAGCCTTAC | 57.901 | 43.478 | 0.00 | 0.00 | 0.00 | 2.34 |
8626 | 15320 | 4.534500 | TCTGAAGTCCCATTTAGCCTTACA | 59.466 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
8627 | 15321 | 5.013704 | TCTGAAGTCCCATTTAGCCTTACAA | 59.986 | 40.000 | 0.00 | 0.00 | 0.00 | 2.41 |
8628 | 15322 | 5.636123 | TGAAGTCCCATTTAGCCTTACAAA | 58.364 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
8629 | 15323 | 6.252995 | TGAAGTCCCATTTAGCCTTACAAAT | 58.747 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
8630 | 15324 | 6.377146 | TGAAGTCCCATTTAGCCTTACAAATC | 59.623 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
8631 | 15325 | 5.826643 | AGTCCCATTTAGCCTTACAAATCA | 58.173 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
8632 | 15326 | 5.888161 | AGTCCCATTTAGCCTTACAAATCAG | 59.112 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
8633 | 15327 | 5.652452 | GTCCCATTTAGCCTTACAAATCAGT | 59.348 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
8634 | 15328 | 6.826741 | GTCCCATTTAGCCTTACAAATCAGTA | 59.173 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
8635 | 15329 | 6.826741 | TCCCATTTAGCCTTACAAATCAGTAC | 59.173 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
8636 | 15330 | 6.238374 | CCCATTTAGCCTTACAAATCAGTACG | 60.238 | 42.308 | 0.00 | 0.00 | 0.00 | 3.67 |
8637 | 15331 | 6.238374 | CCATTTAGCCTTACAAATCAGTACGG | 60.238 | 42.308 | 0.00 | 0.00 | 36.69 | 4.02 |
8638 | 15332 | 3.975168 | AGCCTTACAAATCAGTACGGT | 57.025 | 42.857 | 0.00 | 0.00 | 36.19 | 4.83 |
8639 | 15333 | 3.858247 | AGCCTTACAAATCAGTACGGTC | 58.142 | 45.455 | 0.00 | 0.00 | 36.19 | 4.79 |
8640 | 15334 | 3.259876 | AGCCTTACAAATCAGTACGGTCA | 59.740 | 43.478 | 0.00 | 0.00 | 36.19 | 4.02 |
8641 | 15335 | 3.617263 | GCCTTACAAATCAGTACGGTCAG | 59.383 | 47.826 | 0.00 | 0.00 | 36.19 | 3.51 |
8642 | 15336 | 3.617263 | CCTTACAAATCAGTACGGTCAGC | 59.383 | 47.826 | 0.00 | 0.00 | 30.93 | 4.26 |
8643 | 15337 | 1.710013 | ACAAATCAGTACGGTCAGCG | 58.290 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
8644 | 15338 | 0.999406 | CAAATCAGTACGGTCAGCGG | 59.001 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
8645 | 15339 | 0.108329 | AAATCAGTACGGTCAGCGGG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
8646 | 15340 | 0.968901 | AATCAGTACGGTCAGCGGGA | 60.969 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
8647 | 15341 | 0.755698 | ATCAGTACGGTCAGCGGGAT | 60.756 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
8648 | 15342 | 1.226974 | CAGTACGGTCAGCGGGATG | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
8649 | 15343 | 2.106332 | GTACGGTCAGCGGGATGG | 59.894 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
8650 | 15344 | 3.845259 | TACGGTCAGCGGGATGGC | 61.845 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
8653 | 15347 | 3.785859 | GGTCAGCGGGATGGCAGA | 61.786 | 66.667 | 0.00 | 0.00 | 34.64 | 4.26 |
8654 | 15348 | 2.507944 | GTCAGCGGGATGGCAGAT | 59.492 | 61.111 | 0.00 | 0.00 | 30.93 | 2.90 |
8655 | 15349 | 1.596477 | GTCAGCGGGATGGCAGATC | 60.596 | 63.158 | 0.00 | 0.00 | 30.93 | 2.75 |
8656 | 15350 | 1.763655 | TCAGCGGGATGGCAGATCT | 60.764 | 57.895 | 0.00 | 0.00 | 34.64 | 2.75 |
8657 | 15351 | 1.597302 | CAGCGGGATGGCAGATCTG | 60.597 | 63.158 | 18.84 | 18.84 | 34.64 | 2.90 |
8658 | 15352 | 1.763655 | AGCGGGATGGCAGATCTGA | 60.764 | 57.895 | 27.04 | 6.75 | 34.64 | 3.27 |
8659 | 15353 | 1.146930 | GCGGGATGGCAGATCTGAA | 59.853 | 57.895 | 27.04 | 13.65 | 0.00 | 3.02 |
8660 | 15354 | 0.883814 | GCGGGATGGCAGATCTGAAG | 60.884 | 60.000 | 27.04 | 9.06 | 0.00 | 3.02 |
8661 | 15355 | 0.467384 | CGGGATGGCAGATCTGAAGT | 59.533 | 55.000 | 27.04 | 10.23 | 0.00 | 3.01 |
8662 | 15356 | 1.539929 | CGGGATGGCAGATCTGAAGTC | 60.540 | 57.143 | 27.04 | 17.68 | 0.00 | 3.01 |
8663 | 15357 | 1.202746 | GGGATGGCAGATCTGAAGTCC | 60.203 | 57.143 | 27.04 | 24.27 | 0.00 | 3.85 |
8664 | 15358 | 1.202746 | GGATGGCAGATCTGAAGTCCC | 60.203 | 57.143 | 27.04 | 16.98 | 0.00 | 4.46 |
8665 | 15359 | 1.487976 | GATGGCAGATCTGAAGTCCCA | 59.512 | 52.381 | 27.04 | 21.83 | 0.00 | 4.37 |
8666 | 15360 | 1.588239 | TGGCAGATCTGAAGTCCCAT | 58.412 | 50.000 | 27.04 | 0.00 | 0.00 | 4.00 |
8667 | 15361 | 1.918262 | TGGCAGATCTGAAGTCCCATT | 59.082 | 47.619 | 27.04 | 0.00 | 0.00 | 3.16 |
8668 | 15362 | 2.309755 | TGGCAGATCTGAAGTCCCATTT | 59.690 | 45.455 | 27.04 | 0.00 | 0.00 | 2.32 |
8669 | 15363 | 3.245371 | TGGCAGATCTGAAGTCCCATTTT | 60.245 | 43.478 | 27.04 | 0.00 | 0.00 | 1.82 |
8670 | 15364 | 3.129988 | GGCAGATCTGAAGTCCCATTTTG | 59.870 | 47.826 | 27.04 | 0.00 | 0.00 | 2.44 |
8671 | 15365 | 4.012374 | GCAGATCTGAAGTCCCATTTTGA | 58.988 | 43.478 | 27.04 | 0.00 | 0.00 | 2.69 |
8672 | 15366 | 4.096081 | GCAGATCTGAAGTCCCATTTTGAG | 59.904 | 45.833 | 27.04 | 0.00 | 0.00 | 3.02 |
8673 | 15367 | 5.494724 | CAGATCTGAAGTCCCATTTTGAGA | 58.505 | 41.667 | 18.34 | 0.00 | 0.00 | 3.27 |
8674 | 15368 | 5.353678 | CAGATCTGAAGTCCCATTTTGAGAC | 59.646 | 44.000 | 18.34 | 0.00 | 0.00 | 3.36 |
8675 | 15369 | 4.705110 | TCTGAAGTCCCATTTTGAGACA | 57.295 | 40.909 | 0.00 | 0.00 | 32.82 | 3.41 |
8676 | 15370 | 5.047566 | TCTGAAGTCCCATTTTGAGACAA | 57.952 | 39.130 | 0.00 | 0.00 | 32.82 | 3.18 |
8677 | 15371 | 5.634118 | TCTGAAGTCCCATTTTGAGACAAT | 58.366 | 37.500 | 0.00 | 0.00 | 32.82 | 2.71 |
8678 | 15372 | 6.778821 | TCTGAAGTCCCATTTTGAGACAATA | 58.221 | 36.000 | 0.00 | 0.00 | 32.82 | 1.90 |
8679 | 15373 | 7.230747 | TCTGAAGTCCCATTTTGAGACAATAA | 58.769 | 34.615 | 0.00 | 0.00 | 32.82 | 1.40 |
8680 | 15374 | 7.890127 | TCTGAAGTCCCATTTTGAGACAATAAT | 59.110 | 33.333 | 0.00 | 0.00 | 32.82 | 1.28 |
8681 | 15375 | 8.421249 | TGAAGTCCCATTTTGAGACAATAATT | 57.579 | 30.769 | 0.00 | 0.00 | 32.82 | 1.40 |
8682 | 15376 | 8.306038 | TGAAGTCCCATTTTGAGACAATAATTG | 58.694 | 33.333 | 0.00 | 0.00 | 32.82 | 2.32 |
8683 | 15377 | 8.421249 | AAGTCCCATTTTGAGACAATAATTGA | 57.579 | 30.769 | 0.00 | 0.00 | 32.82 | 2.57 |
8684 | 15378 | 8.421249 | AGTCCCATTTTGAGACAATAATTGAA | 57.579 | 30.769 | 0.00 | 0.00 | 32.82 | 2.69 |
8685 | 15379 | 8.526147 | AGTCCCATTTTGAGACAATAATTGAAG | 58.474 | 33.333 | 0.00 | 0.00 | 32.82 | 3.02 |
8686 | 15380 | 7.761249 | GTCCCATTTTGAGACAATAATTGAAGG | 59.239 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
8687 | 15381 | 7.673504 | TCCCATTTTGAGACAATAATTGAAGGA | 59.326 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
8688 | 15382 | 7.761249 | CCCATTTTGAGACAATAATTGAAGGAC | 59.239 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
8689 | 15383 | 8.306038 | CCATTTTGAGACAATAATTGAAGGACA | 58.694 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
8690 | 15384 | 9.350357 | CATTTTGAGACAATAATTGAAGGACAG | 57.650 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
8691 | 15385 | 8.690203 | TTTTGAGACAATAATTGAAGGACAGA | 57.310 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
8692 | 15386 | 8.868522 | TTTGAGACAATAATTGAAGGACAGAT | 57.131 | 30.769 | 0.00 | 0.00 | 0.00 | 2.90 |
8693 | 15387 | 7.854557 | TGAGACAATAATTGAAGGACAGATG | 57.145 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
8694 | 15388 | 6.825213 | TGAGACAATAATTGAAGGACAGATGG | 59.175 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
8695 | 15389 | 6.725364 | AGACAATAATTGAAGGACAGATGGT | 58.275 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
8696 | 15390 | 6.600822 | AGACAATAATTGAAGGACAGATGGTG | 59.399 | 38.462 | 0.00 | 0.00 | 0.00 | 4.17 |
8697 | 15391 | 6.248433 | ACAATAATTGAAGGACAGATGGTGT | 58.752 | 36.000 | 0.00 | 0.00 | 44.49 | 4.16 |
8698 | 15392 | 6.721208 | ACAATAATTGAAGGACAGATGGTGTT | 59.279 | 34.615 | 0.00 | 0.00 | 40.56 | 3.32 |
8699 | 15393 | 6.764308 | ATAATTGAAGGACAGATGGTGTTG | 57.236 | 37.500 | 0.00 | 0.00 | 40.56 | 3.33 |
8700 | 15394 | 3.576078 | TTGAAGGACAGATGGTGTTGT | 57.424 | 42.857 | 0.00 | 0.00 | 40.56 | 3.32 |
8721 | 15415 | 7.502226 | TGTTGTCTTTACTCCAGTGAAAATCAT | 59.498 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
8766 | 15461 | 7.275779 | AGCTGCCTATTTATATTTCGATGTACG | 59.724 | 37.037 | 0.00 | 0.00 | 44.09 | 3.67 |
8795 | 15490 | 3.313526 | ACATTTCAGCAGGCATTCGATAC | 59.686 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
8807 | 15502 | 3.689649 | GCATTCGATACAACCCAGAGTTT | 59.310 | 43.478 | 0.00 | 0.00 | 36.18 | 2.66 |
8834 | 15529 | 0.805322 | GCACAGCTGATCCTCTGTCG | 60.805 | 60.000 | 23.35 | 10.01 | 41.19 | 4.35 |
8845 | 15540 | 2.995283 | TCCTCTGTCGAATCTAACCGA | 58.005 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
8868 | 15567 | 4.001652 | GCTTCCTTACTGAAACACTACCC | 58.998 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
8878 | 15577 | 3.392947 | TGAAACACTACCCCACTTCATGA | 59.607 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
8915 | 15633 | 4.424061 | TCAATTGCAGTCACTAACATGC | 57.576 | 40.909 | 0.00 | 0.00 | 39.14 | 4.06 |
8916 | 15634 | 3.191162 | TCAATTGCAGTCACTAACATGCC | 59.809 | 43.478 | 0.00 | 0.00 | 37.89 | 4.40 |
8918 | 15636 | 0.320050 | TGCAGTCACTAACATGCCGA | 59.680 | 50.000 | 0.00 | 0.00 | 37.89 | 5.54 |
8920 | 15638 | 1.594862 | GCAGTCACTAACATGCCGATC | 59.405 | 52.381 | 0.00 | 0.00 | 32.49 | 3.69 |
8921 | 15639 | 2.892374 | CAGTCACTAACATGCCGATCA | 58.108 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
8922 | 15640 | 3.261580 | CAGTCACTAACATGCCGATCAA | 58.738 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
8923 | 15641 | 3.873361 | CAGTCACTAACATGCCGATCAAT | 59.127 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
8924 | 15642 | 4.333649 | CAGTCACTAACATGCCGATCAATT | 59.666 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
8925 | 15643 | 4.333649 | AGTCACTAACATGCCGATCAATTG | 59.666 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
8926 | 15644 | 3.065233 | TCACTAACATGCCGATCAATTGC | 59.935 | 43.478 | 0.00 | 0.00 | 0.00 | 3.56 |
8941 | 15659 | 1.359848 | ATTGCAGTAGTTCTTCCGCG | 58.640 | 50.000 | 0.00 | 0.00 | 0.00 | 6.46 |
8945 | 15663 | 1.792006 | CAGTAGTTCTTCCGCGGTTT | 58.208 | 50.000 | 27.15 | 7.96 | 0.00 | 3.27 |
8958 | 15676 | 1.369625 | GCGGTTTGAGGTGGTATCTG | 58.630 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
8979 | 15697 | 2.164624 | GGTACTGTACCTGCAGAGACAG | 59.835 | 54.545 | 30.77 | 30.77 | 45.52 | 3.51 |
9014 | 15732 | 4.084118 | GCAGTCTGAACAGAGATGTTTGAC | 60.084 | 45.833 | 3.32 | 14.62 | 38.27 | 3.18 |
9034 | 15752 | 2.289320 | ACAGAGAACCACTGATGCTGTC | 60.289 | 50.000 | 0.00 | 0.00 | 38.55 | 3.51 |
9083 | 15801 | 0.868406 | AGCAATTAGATTAGCGCCGC | 59.132 | 50.000 | 2.29 | 0.00 | 0.00 | 6.53 |
9089 | 15807 | 0.101759 | TAGATTAGCGCCGCGAAACT | 59.898 | 50.000 | 18.91 | 17.48 | 32.29 | 2.66 |
9113 | 15831 | 6.276847 | TGTTGAAAATTAACACGGCTCAAAT | 58.723 | 32.000 | 0.00 | 0.00 | 33.43 | 2.32 |
9114 | 15832 | 6.758886 | TGTTGAAAATTAACACGGCTCAAATT | 59.241 | 30.769 | 0.00 | 0.00 | 33.43 | 1.82 |
9115 | 15833 | 7.921214 | TGTTGAAAATTAACACGGCTCAAATTA | 59.079 | 29.630 | 0.00 | 0.00 | 33.43 | 1.40 |
9116 | 15834 | 8.756864 | GTTGAAAATTAACACGGCTCAAATTAA | 58.243 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
9117 | 15835 | 8.873215 | TGAAAATTAACACGGCTCAAATTAAA | 57.127 | 26.923 | 0.00 | 0.00 | 0.00 | 1.52 |
9119 | 15837 | 9.575702 | GAAAATTAACACGGCTCAAATTAAAAC | 57.424 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
9120 | 15838 | 7.646446 | AATTAACACGGCTCAAATTAAAACC | 57.354 | 32.000 | 0.00 | 0.00 | 0.00 | 3.27 |
9121 | 15839 | 4.929819 | AACACGGCTCAAATTAAAACCT | 57.070 | 36.364 | 0.00 | 0.00 | 0.00 | 3.50 |
9122 | 15840 | 4.499037 | ACACGGCTCAAATTAAAACCTC | 57.501 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
9123 | 15841 | 3.058501 | ACACGGCTCAAATTAAAACCTCG | 60.059 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
9146 | 15864 | 6.209589 | TCGAGAGGGATTCATCTATTTGGTAG | 59.790 | 42.308 | 0.00 | 0.00 | 33.78 | 3.18 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
7 | 8 | 0.829602 | GGATGATCCTCTCCGCCTCA | 60.830 | 60.000 | 3.71 | 0.00 | 32.53 | 3.86 |
22 | 23 | 3.993234 | GCATCACGCTCGCGGATG | 61.993 | 66.667 | 24.88 | 24.88 | 43.31 | 3.51 |
45 | 46 | 3.221389 | CATGGCATGGCTTCCCGG | 61.221 | 66.667 | 19.80 | 0.00 | 0.00 | 5.73 |
46 | 47 | 2.124193 | TCATGGCATGGCTTCCCG | 60.124 | 61.111 | 26.15 | 2.87 | 0.00 | 5.14 |
55 | 56 | 1.219773 | AGGTGGAGATGTCATGGCAT | 58.780 | 50.000 | 13.82 | 13.82 | 0.00 | 4.40 |
61 | 62 | 0.615331 | GGCAGAAGGTGGAGATGTCA | 59.385 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
65 | 66 | 2.586792 | GCGGCAGAAGGTGGAGAT | 59.413 | 61.111 | 0.00 | 0.00 | 0.00 | 2.75 |
82 | 83 | 3.636231 | TCACCGTCAGGCTTGGGG | 61.636 | 66.667 | 0.00 | 0.38 | 42.76 | 4.96 |
92 | 93 | 2.175322 | GTCGGAGTCGTCACCGTC | 59.825 | 66.667 | 16.61 | 8.87 | 45.41 | 4.79 |
121 | 122 | 2.354259 | GCTCCTCCTCTGTCATTGTTG | 58.646 | 52.381 | 0.00 | 0.00 | 0.00 | 3.33 |
124 | 125 | 0.179089 | CGGCTCCTCCTCTGTCATTG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 2.82 |
125 | 126 | 1.965754 | GCGGCTCCTCCTCTGTCATT | 61.966 | 60.000 | 0.00 | 0.00 | 0.00 | 2.57 |
126 | 127 | 2.430610 | GCGGCTCCTCCTCTGTCAT | 61.431 | 63.158 | 0.00 | 0.00 | 0.00 | 3.06 |
127 | 128 | 3.071206 | GCGGCTCCTCCTCTGTCA | 61.071 | 66.667 | 0.00 | 0.00 | 0.00 | 3.58 |
128 | 129 | 3.844090 | GGCGGCTCCTCCTCTGTC | 61.844 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
149 | 150 | 2.590007 | GTAGCTCATGCCGGGCTG | 60.590 | 66.667 | 21.46 | 15.39 | 40.80 | 4.85 |
150 | 151 | 4.227134 | CGTAGCTCATGCCGGGCT | 62.227 | 66.667 | 21.46 | 5.33 | 40.80 | 5.19 |
151 | 152 | 4.221422 | TCGTAGCTCATGCCGGGC | 62.221 | 66.667 | 13.32 | 13.32 | 40.80 | 6.13 |
152 | 153 | 2.028190 | CTCGTAGCTCATGCCGGG | 59.972 | 66.667 | 2.18 | 0.00 | 40.80 | 5.73 |
153 | 154 | 2.028190 | CCTCGTAGCTCATGCCGG | 59.972 | 66.667 | 0.00 | 0.00 | 40.80 | 6.13 |
154 | 155 | 1.299468 | GACCTCGTAGCTCATGCCG | 60.299 | 63.158 | 0.00 | 0.00 | 40.80 | 5.69 |
156 | 157 | 0.528684 | GGTGACCTCGTAGCTCATGC | 60.529 | 60.000 | 0.00 | 0.00 | 40.05 | 4.06 |
157 | 158 | 0.248661 | CGGTGACCTCGTAGCTCATG | 60.249 | 60.000 | 0.00 | 0.00 | 0.00 | 3.07 |
158 | 159 | 0.680280 | ACGGTGACCTCGTAGCTCAT | 60.680 | 55.000 | 0.00 | 0.00 | 39.22 | 2.90 |
162 | 163 | 0.456312 | CTTCACGGTGACCTCGTAGC | 60.456 | 60.000 | 10.97 | 0.00 | 38.94 | 3.58 |
170 | 171 | 6.388435 | AACTATCCTATACTTCACGGTGAC | 57.612 | 41.667 | 10.97 | 0.00 | 0.00 | 3.67 |
175 | 176 | 9.813446 | AAAACCTAAACTATCCTATACTTCACG | 57.187 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
198 | 199 | 8.404765 | CGGTGAACTAAAAACCCTAAACTAAAA | 58.595 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
202 | 203 | 4.823442 | CCGGTGAACTAAAAACCCTAAACT | 59.177 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
203 | 204 | 4.821260 | TCCGGTGAACTAAAAACCCTAAAC | 59.179 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
204 | 205 | 4.821260 | GTCCGGTGAACTAAAAACCCTAAA | 59.179 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
207 | 208 | 2.807837 | CGTCCGGTGAACTAAAAACCCT | 60.808 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
208 | 209 | 1.532437 | CGTCCGGTGAACTAAAAACCC | 59.468 | 52.381 | 0.00 | 0.00 | 0.00 | 4.11 |
217 | 219 | 4.565531 | ACGATTCGTCCGGTGAAC | 57.434 | 55.556 | 5.75 | 0.00 | 33.69 | 3.18 |
228 | 230 | 9.940166 | ATAATTTTACATAAAACCGGACGATTC | 57.060 | 29.630 | 9.46 | 0.00 | 37.92 | 2.52 |
259 | 262 | 4.822036 | ACACGACGGATTTCATTGAAAA | 57.178 | 36.364 | 15.34 | 0.53 | 35.11 | 2.29 |
291 | 294 | 4.993029 | AATCAAACTGGACGGACAAAAA | 57.007 | 36.364 | 0.00 | 0.00 | 0.00 | 1.94 |
294 | 297 | 6.642707 | AATTTAATCAAACTGGACGGACAA | 57.357 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
295 | 298 | 6.263392 | TGAAATTTAATCAAACTGGACGGACA | 59.737 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
296 | 299 | 6.674066 | TGAAATTTAATCAAACTGGACGGAC | 58.326 | 36.000 | 0.00 | 0.00 | 0.00 | 4.79 |
297 | 300 | 6.885952 | TGAAATTTAATCAAACTGGACGGA | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
299 | 302 | 6.468956 | CGGATGAAATTTAATCAAACTGGACG | 59.531 | 38.462 | 16.02 | 5.34 | 0.00 | 4.79 |
300 | 303 | 7.312899 | ACGGATGAAATTTAATCAAACTGGAC | 58.687 | 34.615 | 16.02 | 0.00 | 0.00 | 4.02 |
302 | 305 | 8.434661 | CAAACGGATGAAATTTAATCAAACTGG | 58.565 | 33.333 | 16.02 | 2.45 | 0.00 | 4.00 |
303 | 306 | 9.190858 | TCAAACGGATGAAATTTAATCAAACTG | 57.809 | 29.630 | 16.02 | 8.54 | 0.00 | 3.16 |
304 | 307 | 9.927668 | ATCAAACGGATGAAATTTAATCAAACT | 57.072 | 25.926 | 16.02 | 0.00 | 34.06 | 2.66 |
310 | 313 | 9.927668 | ACTCAAATCAAACGGATGAAATTTAAT | 57.072 | 25.926 | 0.00 | 0.00 | 36.02 | 1.40 |
311 | 314 | 9.757227 | AACTCAAATCAAACGGATGAAATTTAA | 57.243 | 25.926 | 0.00 | 0.00 | 36.02 | 1.52 |
312 | 315 | 9.190858 | CAACTCAAATCAAACGGATGAAATTTA | 57.809 | 29.630 | 0.00 | 0.00 | 36.02 | 1.40 |
313 | 316 | 7.710475 | ACAACTCAAATCAAACGGATGAAATTT | 59.290 | 29.630 | 0.00 | 0.00 | 36.02 | 1.82 |
314 | 317 | 7.209475 | ACAACTCAAATCAAACGGATGAAATT | 58.791 | 30.769 | 0.00 | 0.00 | 36.02 | 1.82 |
315 | 318 | 6.748132 | ACAACTCAAATCAAACGGATGAAAT | 58.252 | 32.000 | 0.00 | 0.00 | 36.02 | 2.17 |
316 | 319 | 6.142818 | ACAACTCAAATCAAACGGATGAAA | 57.857 | 33.333 | 0.00 | 0.00 | 36.02 | 2.69 |
317 | 320 | 5.766150 | ACAACTCAAATCAAACGGATGAA | 57.234 | 34.783 | 0.00 | 0.00 | 36.02 | 2.57 |
318 | 321 | 5.067153 | ACAACAACTCAAATCAAACGGATGA | 59.933 | 36.000 | 0.00 | 0.00 | 36.02 | 2.92 |
319 | 322 | 5.173673 | CACAACAACTCAAATCAAACGGATG | 59.826 | 40.000 | 0.00 | 0.00 | 36.02 | 3.51 |
320 | 323 | 5.067153 | TCACAACAACTCAAATCAAACGGAT | 59.933 | 36.000 | 0.00 | 0.00 | 38.05 | 4.18 |
333 | 336 | 7.871853 | AGTGGTGTATATTTTCACAACAACTC | 58.128 | 34.615 | 12.27 | 0.73 | 43.59 | 3.01 |
343 | 346 | 7.801716 | TTCAGCCATAGTGGTGTATATTTTC | 57.198 | 36.000 | 0.00 | 0.00 | 40.46 | 2.29 |
352 | 355 | 2.425143 | ACCATTCAGCCATAGTGGTG | 57.575 | 50.000 | 0.00 | 0.00 | 41.38 | 4.17 |
353 | 356 | 4.413520 | AGATAACCATTCAGCCATAGTGGT | 59.586 | 41.667 | 0.00 | 0.00 | 44.62 | 4.16 |
354 | 357 | 4.978099 | AGATAACCATTCAGCCATAGTGG | 58.022 | 43.478 | 0.00 | 0.00 | 41.55 | 4.00 |
355 | 358 | 4.999950 | GGAGATAACCATTCAGCCATAGTG | 59.000 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
356 | 359 | 4.042187 | GGGAGATAACCATTCAGCCATAGT | 59.958 | 45.833 | 0.00 | 0.00 | 0.00 | 2.12 |
357 | 360 | 4.583871 | GGGAGATAACCATTCAGCCATAG | 58.416 | 47.826 | 0.00 | 0.00 | 0.00 | 2.23 |
360 | 363 | 1.140852 | CGGGAGATAACCATTCAGCCA | 59.859 | 52.381 | 0.00 | 0.00 | 0.00 | 4.75 |
362 | 365 | 2.622064 | ACGGGAGATAACCATTCAGC | 57.378 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
363 | 366 | 6.017934 | CACAAATACGGGAGATAACCATTCAG | 60.018 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
365 | 368 | 5.820947 | ACACAAATACGGGAGATAACCATTC | 59.179 | 40.000 | 0.00 | 0.00 | 0.00 | 2.67 |
366 | 369 | 5.751586 | ACACAAATACGGGAGATAACCATT | 58.248 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
367 | 370 | 5.367945 | ACACAAATACGGGAGATAACCAT | 57.632 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
368 | 371 | 4.829872 | ACACAAATACGGGAGATAACCA | 57.170 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
370 | 373 | 4.260091 | GCGAACACAAATACGGGAGATAAC | 60.260 | 45.833 | 0.00 | 0.00 | 0.00 | 1.89 |
371 | 374 | 3.866910 | GCGAACACAAATACGGGAGATAA | 59.133 | 43.478 | 0.00 | 0.00 | 0.00 | 1.75 |
373 | 376 | 2.277084 | GCGAACACAAATACGGGAGAT | 58.723 | 47.619 | 0.00 | 0.00 | 0.00 | 2.75 |
374 | 377 | 1.717194 | GCGAACACAAATACGGGAGA | 58.283 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
375 | 378 | 0.368907 | CGCGAACACAAATACGGGAG | 59.631 | 55.000 | 0.00 | 0.00 | 40.15 | 4.30 |
376 | 379 | 1.015085 | CCGCGAACACAAATACGGGA | 61.015 | 55.000 | 8.23 | 0.00 | 40.15 | 5.14 |
377 | 380 | 1.015085 | TCCGCGAACACAAATACGGG | 61.015 | 55.000 | 8.23 | 0.00 | 40.95 | 5.28 |
378 | 381 | 1.003851 | ATCCGCGAACACAAATACGG | 58.996 | 50.000 | 8.23 | 0.00 | 41.92 | 4.02 |
379 | 382 | 1.656594 | TCATCCGCGAACACAAATACG | 59.343 | 47.619 | 8.23 | 0.00 | 0.00 | 3.06 |
380 | 383 | 3.413558 | GTTCATCCGCGAACACAAATAC | 58.586 | 45.455 | 8.23 | 0.00 | 43.89 | 1.89 |
382 | 385 | 1.136085 | CGTTCATCCGCGAACACAAAT | 60.136 | 47.619 | 8.23 | 0.00 | 44.54 | 2.32 |
383 | 386 | 0.233590 | CGTTCATCCGCGAACACAAA | 59.766 | 50.000 | 8.23 | 0.00 | 44.54 | 2.83 |
385 | 388 | 2.663478 | GCGTTCATCCGCGAACACA | 61.663 | 57.895 | 8.23 | 0.00 | 44.54 | 3.72 |
386 | 389 | 2.095843 | GCGTTCATCCGCGAACAC | 59.904 | 61.111 | 8.23 | 0.00 | 44.54 | 3.32 |
396 | 401 | 2.413310 | AAAATACCTCCCGCGTTCAT | 57.587 | 45.000 | 4.92 | 0.00 | 0.00 | 2.57 |
399 | 404 | 1.643880 | CGTAAAATACCTCCCGCGTT | 58.356 | 50.000 | 4.92 | 0.00 | 0.00 | 4.84 |
401 | 406 | 0.877213 | CCCGTAAAATACCTCCCGCG | 60.877 | 60.000 | 0.00 | 0.00 | 0.00 | 6.46 |
405 | 410 | 2.019249 | GGCAACCCGTAAAATACCTCC | 58.981 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
423 | 428 | 2.742116 | TAAGGGCATCTCCACCGGC | 61.742 | 63.158 | 0.00 | 0.00 | 36.21 | 6.13 |
426 | 431 | 0.105039 | CTCGTAAGGGCATCTCCACC | 59.895 | 60.000 | 0.00 | 0.00 | 36.21 | 4.61 |
427 | 432 | 3.669354 | CTCGTAAGGGCATCTCCAC | 57.331 | 57.895 | 0.00 | 0.00 | 36.21 | 4.02 |
445 | 454 | 0.240145 | GTCTGTTTAAAGTGCCCGGC | 59.760 | 55.000 | 1.04 | 1.04 | 0.00 | 6.13 |
460 | 469 | 5.583854 | CAGTCCCATTGATACTCTTTGTCTG | 59.416 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
594 | 616 | 3.461843 | CTTGACGAAGCCAACAAGC | 57.538 | 52.632 | 0.00 | 0.00 | 34.46 | 4.01 |
625 | 647 | 2.580867 | GCTCGGTAGTCAGCAGCG | 60.581 | 66.667 | 0.00 | 0.00 | 35.56 | 5.18 |
630 | 652 | 0.179150 | GACTGCTGCTCGGTAGTCAG | 60.179 | 60.000 | 18.04 | 9.17 | 44.45 | 3.51 |
633 | 655 | 1.886585 | CAGACTGCTGCTCGGTAGT | 59.113 | 57.895 | 0.00 | 0.00 | 34.95 | 2.73 |
645 | 667 | 2.822561 | TGTTGACCTCTCTAGCAGACTG | 59.177 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
646 | 668 | 2.823154 | GTGTTGACCTCTCTAGCAGACT | 59.177 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
648 | 670 | 3.085533 | GAGTGTTGACCTCTCTAGCAGA | 58.914 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
654 | 687 | 1.342819 | GTGCAGAGTGTTGACCTCTCT | 59.657 | 52.381 | 0.00 | 0.00 | 37.18 | 3.10 |
710 | 786 | 2.297033 | GCAGGGAAAGCAACAAATCTCA | 59.703 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
809 | 976 | 1.386057 | CTAGGGGAAGGGGAAGGGG | 60.386 | 68.421 | 0.00 | 0.00 | 0.00 | 4.79 |
820 | 987 | 4.217510 | TCCGACGAAATTATTCTAGGGGA | 58.782 | 43.478 | 0.00 | 0.00 | 33.17 | 4.81 |
821 | 988 | 4.595762 | TCCGACGAAATTATTCTAGGGG | 57.404 | 45.455 | 0.00 | 0.00 | 33.17 | 4.79 |
822 | 989 | 6.073222 | CCAAATCCGACGAAATTATTCTAGGG | 60.073 | 42.308 | 0.00 | 0.00 | 33.17 | 3.53 |
837 | 1007 | 2.762535 | TCTTGGAGTCCAAATCCGAC | 57.237 | 50.000 | 24.59 | 0.00 | 43.44 | 4.79 |
921 | 1112 | 5.008217 | CCATGAACACGAAAAACAGGTTAGA | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
933 | 1135 | 3.053291 | GCCGGCCATGAACACGAA | 61.053 | 61.111 | 18.11 | 0.00 | 0.00 | 3.85 |
1058 | 1292 | 1.272147 | ACTCCCAGATTTCAGTTGGCC | 60.272 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 |
1059 | 1293 | 1.815003 | CACTCCCAGATTTCAGTTGGC | 59.185 | 52.381 | 0.00 | 0.00 | 0.00 | 4.52 |
1060 | 1294 | 1.815003 | GCACTCCCAGATTTCAGTTGG | 59.185 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
1062 | 1296 | 1.425066 | TGGCACTCCCAGATTTCAGTT | 59.575 | 47.619 | 0.00 | 0.00 | 39.18 | 3.16 |
1064 | 1298 | 3.963733 | TGGCACTCCCAGATTTCAG | 57.036 | 52.632 | 0.00 | 0.00 | 39.18 | 3.02 |
1075 | 1309 | 2.479566 | TTTGGAGTCAGATGGCACTC | 57.520 | 50.000 | 0.00 | 0.00 | 38.71 | 3.51 |
1076 | 1310 | 2.957402 | TTTTGGAGTCAGATGGCACT | 57.043 | 45.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1077 | 1311 | 3.084039 | TGATTTTGGAGTCAGATGGCAC | 58.916 | 45.455 | 0.00 | 0.00 | 0.00 | 5.01 |
1078 | 1312 | 3.084039 | GTGATTTTGGAGTCAGATGGCA | 58.916 | 45.455 | 0.00 | 0.00 | 0.00 | 4.92 |
1079 | 1313 | 3.084039 | TGTGATTTTGGAGTCAGATGGC | 58.916 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
1080 | 1314 | 4.330250 | AGTGTGATTTTGGAGTCAGATGG | 58.670 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
1081 | 1315 | 5.471116 | TGAAGTGTGATTTTGGAGTCAGATG | 59.529 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1262 | 1525 | 3.638160 | TGAGGAATTTTGACAAGCAGCTT | 59.362 | 39.130 | 0.21 | 0.21 | 0.00 | 3.74 |
1323 | 1586 | 2.965783 | GCGGTGAGCTGAGACTGA | 59.034 | 61.111 | 0.00 | 0.00 | 44.04 | 3.41 |
1400 | 1678 | 1.004277 | GTTACTCCCCAGCATCCACAA | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 3.33 |
1465 | 1743 | 1.338337 | AGTCCCTGAGATAATGCGACG | 59.662 | 52.381 | 0.00 | 0.00 | 0.00 | 5.12 |
1521 | 1806 | 2.391389 | GCTCCAAGAAACCGAGGCG | 61.391 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
1561 | 1846 | 0.179161 | CGTAGAGGACCAGCAAGACG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1593 | 1878 | 7.588143 | ACAATATCAACGACTGAAGAAGAAG | 57.412 | 36.000 | 0.00 | 0.00 | 37.67 | 2.85 |
1638 | 1923 | 6.405842 | GGACAAAATATCTAAACAGCCCTTGG | 60.406 | 42.308 | 0.00 | 0.00 | 0.00 | 3.61 |
1676 | 3751 | 5.679734 | ATGCCATAAATAAGCACGAGAAG | 57.320 | 39.130 | 0.00 | 0.00 | 39.77 | 2.85 |
1735 | 3810 | 3.452755 | GGCTTGTATAAACCATTGCCC | 57.547 | 47.619 | 0.00 | 0.00 | 33.66 | 5.36 |
1766 | 3844 | 0.388649 | GCTACCTCACCGTCTGTGTG | 60.389 | 60.000 | 0.00 | 0.00 | 45.61 | 3.82 |
1875 | 3953 | 1.999634 | AAGGGGATTCTCATGGCCCG | 62.000 | 60.000 | 0.00 | 0.00 | 41.63 | 6.13 |
1880 | 3958 | 2.507058 | TGTCCTCAAGGGGATTCTCATG | 59.493 | 50.000 | 0.00 | 0.00 | 37.73 | 3.07 |
2327 | 4405 | 8.950210 | CACATAGTTCATAATTTGTCCAGAAGT | 58.050 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
2653 | 4731 | 1.007963 | ACTTCCCTCAACCCCTCGATA | 59.992 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
2725 | 4808 | 0.979665 | CAGGAGAAGCCCAGAACAGA | 59.020 | 55.000 | 0.00 | 0.00 | 37.37 | 3.41 |
3142 | 5231 | 0.537371 | CGCCTTCAGTTTTGGGGACT | 60.537 | 55.000 | 0.00 | 0.00 | 36.10 | 3.85 |
3201 | 5299 | 7.417116 | CCAAATTCTGAGTATGGCAGCTATTTT | 60.417 | 37.037 | 0.00 | 0.00 | 31.31 | 1.82 |
4138 | 7016 | 5.530171 | CCATGAATACCATCTGTCTCCTTTG | 59.470 | 44.000 | 0.00 | 0.00 | 31.94 | 2.77 |
4646 | 7556 | 5.222130 | ACCTGCATTAGAAGAGAAAGGGAAA | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 3.13 |
4655 | 7565 | 5.126869 | TCTGAAGAGACCTGCATTAGAAGAG | 59.873 | 44.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4879 | 7789 | 9.681692 | TGAAGTGTGAATGAAATCAAATAAGTG | 57.318 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
4880 | 7790 | 9.683069 | GTGAAGTGTGAATGAAATCAAATAAGT | 57.317 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
4881 | 7791 | 9.681692 | TGTGAAGTGTGAATGAAATCAAATAAG | 57.318 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
5070 | 8096 | 4.570930 | AGAAACGATCTTCTCCCTCAAAC | 58.429 | 43.478 | 0.00 | 0.00 | 33.39 | 2.93 |
5249 | 8275 | 5.163099 | TGCTCATATAATTGCTTACCAGGGT | 60.163 | 40.000 | 0.00 | 0.00 | 0.00 | 4.34 |
5303 | 8770 | 5.363868 | TGGAGGGAGTATCAAGTATGTTCTG | 59.636 | 44.000 | 0.00 | 0.00 | 36.25 | 3.02 |
5344 | 9067 | 4.312443 | GAGACCCACGTCATGTCTAAAAA | 58.688 | 43.478 | 10.24 | 0.00 | 41.87 | 1.94 |
5358 | 9081 | 5.300792 | TCAAATTAGTTTGTTGGAGACCCAC | 59.699 | 40.000 | 10.15 | 0.00 | 44.03 | 4.61 |
5495 | 9324 | 4.804139 | TGAATAGATCGAAAGTTTCTCCGC | 59.196 | 41.667 | 13.56 | 1.15 | 0.00 | 5.54 |
5509 | 9340 | 6.944096 | TCCCATGACAGATGATGAATAGATC | 58.056 | 40.000 | 0.00 | 0.00 | 0.00 | 2.75 |
5532 | 9363 | 7.148641 | TGTTACTTCTGATGTTCTCTGTTCTC | 58.851 | 38.462 | 1.28 | 0.00 | 0.00 | 2.87 |
5585 | 9416 | 1.743958 | AGTGCTTGTAGTCGTCGCTAT | 59.256 | 47.619 | 0.00 | 0.00 | 0.00 | 2.97 |
5663 | 9495 | 1.544691 | CCGGACTGCTACTACAACACT | 59.455 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
5664 | 9496 | 1.542915 | TCCGGACTGCTACTACAACAC | 59.457 | 52.381 | 0.00 | 0.00 | 0.00 | 3.32 |
5681 | 9513 | 1.425412 | CCTTAACACCACGACTTCCG | 58.575 | 55.000 | 0.00 | 0.00 | 45.44 | 4.30 |
5832 | 9854 | 3.261580 | CATCTTGATGTTGCGTCTACCA | 58.738 | 45.455 | 2.66 | 0.00 | 0.00 | 3.25 |
5903 | 9925 | 4.329545 | TGCCTCGGTTGGGACTGC | 62.330 | 66.667 | 0.00 | 0.00 | 31.93 | 4.40 |
5907 | 9932 | 1.488705 | ATTCAGTGCCTCGGTTGGGA | 61.489 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
5918 | 9943 | 4.024893 | TCTCGTTCTTGTTTGATTCAGTGC | 60.025 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
5920 | 9945 | 4.752101 | CCTCTCGTTCTTGTTTGATTCAGT | 59.248 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
5926 | 9951 | 1.071699 | CCCCCTCTCGTTCTTGTTTGA | 59.928 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
6005 | 10030 | 0.537188 | CACCTATCCGTGTTGCCTCT | 59.463 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
6124 | 10149 | 2.349886 | GAGTGCAACATTCTAGAAGGCG | 59.650 | 50.000 | 16.73 | 9.55 | 41.43 | 5.52 |
6140 | 10165 | 9.765795 | ATAATAAACATTACTACCTCAGAGTGC | 57.234 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
6315 | 10509 | 8.442632 | AATACTTTATTTAGTTAACTCCGGCC | 57.557 | 34.615 | 12.39 | 0.00 | 0.00 | 6.13 |
6371 | 10583 | 3.485877 | GCAAGGAACTAATTAGTGCTGCG | 60.486 | 47.826 | 20.78 | 11.43 | 38.49 | 5.18 |
6701 | 10916 | 9.461312 | TCTGTTAAATAAAAGTCCAGCACATAT | 57.539 | 29.630 | 0.00 | 0.00 | 0.00 | 1.78 |
6729 | 10945 | 4.299022 | AGGGGAGCATCTATCCTATACCTT | 59.701 | 45.833 | 0.00 | 0.00 | 37.01 | 3.50 |
6910 | 11126 | 2.224066 | ACCGCAGATCATGTAAGCCTAC | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
7214 | 12957 | 7.224362 | CCATTTTGTTAATGTGCTGAACTTTCA | 59.776 | 33.333 | 0.00 | 0.00 | 35.57 | 2.69 |
7443 | 13996 | 4.889409 | AGCTTCAAGAAGTTGACATTTGGA | 59.111 | 37.500 | 11.14 | 0.00 | 42.60 | 3.53 |
7756 | 14337 | 1.610086 | CCTTTGGCCCATGCTCCAA | 60.610 | 57.895 | 0.00 | 11.44 | 40.31 | 3.53 |
8181 | 14828 | 5.249420 | AGAGATAGCCCAAGAAACTTCAAC | 58.751 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
8210 | 14857 | 8.839343 | CACCATGATACTGCATAGAATTTGTTA | 58.161 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
8243 | 14890 | 1.551430 | CATCAATTCCAAAGGGCAGCA | 59.449 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
8286 | 14933 | 8.523715 | CCATTTACTGGGGCAAGGAAATCTTG | 62.524 | 46.154 | 6.64 | 1.75 | 46.50 | 3.02 |
8309 | 14956 | 1.965414 | TGCAGATTTAGTCCCTCCCA | 58.035 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
8362 | 15009 | 7.212976 | ACTACTGTGACCTTGCTAATGATATG | 58.787 | 38.462 | 0.00 | 0.00 | 0.00 | 1.78 |
8363 | 15010 | 7.366847 | ACTACTGTGACCTTGCTAATGATAT | 57.633 | 36.000 | 0.00 | 0.00 | 0.00 | 1.63 |
8410 | 15060 | 3.000727 | ACGCTGAAGTATGGTTGTAAGC | 58.999 | 45.455 | 0.00 | 0.00 | 0.00 | 3.09 |
8418 | 15068 | 3.863424 | ACATAAACGACGCTGAAGTATGG | 59.137 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
8419 | 15069 | 5.061684 | TCAACATAAACGACGCTGAAGTATG | 59.938 | 40.000 | 0.00 | 0.00 | 0.00 | 2.39 |
8420 | 15070 | 5.165676 | TCAACATAAACGACGCTGAAGTAT | 58.834 | 37.500 | 0.00 | 0.00 | 0.00 | 2.12 |
8426 | 15115 | 2.840176 | GCATTCAACATAAACGACGCTG | 59.160 | 45.455 | 0.00 | 0.00 | 0.00 | 5.18 |
8427 | 15116 | 2.482336 | TGCATTCAACATAAACGACGCT | 59.518 | 40.909 | 0.00 | 0.00 | 0.00 | 5.07 |
8452 | 15146 | 2.356892 | CAATCGCATGAAACGTCATCG | 58.643 | 47.619 | 0.00 | 0.00 | 42.88 | 3.84 |
8458 | 15152 | 2.338228 | CGAAAACCAATCGCATGAAACG | 59.662 | 45.455 | 0.00 | 0.00 | 33.07 | 3.60 |
8486 | 15180 | 7.201714 | CGTTCTTATATTATAGGACGGAGGGAG | 60.202 | 44.444 | 0.00 | 0.00 | 39.22 | 4.30 |
8487 | 15181 | 6.600822 | CGTTCTTATATTATAGGACGGAGGGA | 59.399 | 42.308 | 0.00 | 0.00 | 39.22 | 4.20 |
8488 | 15182 | 6.376581 | ACGTTCTTATATTATAGGACGGAGGG | 59.623 | 42.308 | 13.99 | 1.22 | 45.45 | 4.30 |
8489 | 15183 | 7.388460 | ACGTTCTTATATTATAGGACGGAGG | 57.612 | 40.000 | 13.99 | 4.68 | 45.45 | 4.30 |
8504 | 15198 | 9.233232 | CTGTTTTAGCTTCAAAAACGTTCTTAT | 57.767 | 29.630 | 15.21 | 0.00 | 45.52 | 1.73 |
8505 | 15199 | 8.238631 | ACTGTTTTAGCTTCAAAAACGTTCTTA | 58.761 | 29.630 | 15.21 | 0.84 | 45.52 | 2.10 |
8506 | 15200 | 7.088272 | ACTGTTTTAGCTTCAAAAACGTTCTT | 58.912 | 30.769 | 15.21 | 0.00 | 45.52 | 2.52 |
8507 | 15201 | 6.617879 | ACTGTTTTAGCTTCAAAAACGTTCT | 58.382 | 32.000 | 15.21 | 0.00 | 45.52 | 3.01 |
8508 | 15202 | 6.864560 | ACTGTTTTAGCTTCAAAAACGTTC | 57.135 | 33.333 | 15.21 | 0.00 | 45.52 | 3.95 |
8509 | 15203 | 7.382759 | TCAAACTGTTTTAGCTTCAAAAACGTT | 59.617 | 29.630 | 15.21 | 16.67 | 45.52 | 3.99 |
8510 | 15204 | 6.864165 | TCAAACTGTTTTAGCTTCAAAAACGT | 59.136 | 30.769 | 15.21 | 13.21 | 45.52 | 3.99 |
8511 | 15205 | 7.271936 | TCAAACTGTTTTAGCTTCAAAAACG | 57.728 | 32.000 | 15.21 | 12.76 | 45.52 | 3.60 |
8512 | 15206 | 9.871299 | TTTTCAAACTGTTTTAGCTTCAAAAAC | 57.129 | 25.926 | 13.93 | 13.93 | 43.77 | 2.43 |
8514 | 15208 | 9.871299 | GTTTTTCAAACTGTTTTAGCTTCAAAA | 57.129 | 25.926 | 2.41 | 0.00 | 0.00 | 2.44 |
8515 | 15209 | 8.217778 | CGTTTTTCAAACTGTTTTAGCTTCAAA | 58.782 | 29.630 | 2.41 | 0.00 | 0.00 | 2.69 |
8516 | 15210 | 7.382759 | ACGTTTTTCAAACTGTTTTAGCTTCAA | 59.617 | 29.630 | 2.41 | 0.00 | 0.00 | 2.69 |
8517 | 15211 | 6.864165 | ACGTTTTTCAAACTGTTTTAGCTTCA | 59.136 | 30.769 | 2.41 | 0.00 | 0.00 | 3.02 |
8518 | 15212 | 7.273188 | ACGTTTTTCAAACTGTTTTAGCTTC | 57.727 | 32.000 | 2.41 | 0.00 | 0.00 | 3.86 |
8519 | 15213 | 7.646446 | AACGTTTTTCAAACTGTTTTAGCTT | 57.354 | 28.000 | 2.41 | 0.00 | 0.00 | 3.74 |
8520 | 15214 | 7.646446 | AAACGTTTTTCAAACTGTTTTAGCT | 57.354 | 28.000 | 7.96 | 0.00 | 0.00 | 3.32 |
8521 | 15215 | 8.702408 | AAAAACGTTTTTCAAACTGTTTTAGC | 57.298 | 26.923 | 28.62 | 0.00 | 35.61 | 3.09 |
8537 | 15231 | 8.829612 | CCTCCGTACCATAATATAAAAACGTTT | 58.170 | 33.333 | 7.96 | 7.96 | 0.00 | 3.60 |
8538 | 15232 | 7.442062 | CCCTCCGTACCATAATATAAAAACGTT | 59.558 | 37.037 | 0.00 | 0.00 | 0.00 | 3.99 |
8539 | 15233 | 6.930722 | CCCTCCGTACCATAATATAAAAACGT | 59.069 | 38.462 | 0.00 | 0.00 | 0.00 | 3.99 |
8540 | 15234 | 7.153985 | TCCCTCCGTACCATAATATAAAAACG | 58.846 | 38.462 | 0.00 | 0.00 | 0.00 | 3.60 |
8541 | 15235 | 8.152898 | ACTCCCTCCGTACCATAATATAAAAAC | 58.847 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
8542 | 15236 | 8.266363 | ACTCCCTCCGTACCATAATATAAAAA | 57.734 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
8543 | 15237 | 7.860649 | ACTCCCTCCGTACCATAATATAAAA | 57.139 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
8544 | 15238 | 8.172741 | ACTACTCCCTCCGTACCATAATATAAA | 58.827 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
8545 | 15239 | 7.702785 | ACTACTCCCTCCGTACCATAATATAA | 58.297 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
8546 | 15240 | 7.276088 | ACTACTCCCTCCGTACCATAATATA | 57.724 | 40.000 | 0.00 | 0.00 | 0.00 | 0.86 |
8547 | 15241 | 6.150034 | ACTACTCCCTCCGTACCATAATAT | 57.850 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
8548 | 15242 | 5.589367 | ACTACTCCCTCCGTACCATAATA | 57.411 | 43.478 | 0.00 | 0.00 | 0.00 | 0.98 |
8549 | 15243 | 4.466255 | ACTACTCCCTCCGTACCATAAT | 57.534 | 45.455 | 0.00 | 0.00 | 0.00 | 1.28 |
8550 | 15244 | 3.959495 | ACTACTCCCTCCGTACCATAA | 57.041 | 47.619 | 0.00 | 0.00 | 0.00 | 1.90 |
8551 | 15245 | 3.461085 | AGAACTACTCCCTCCGTACCATA | 59.539 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
8552 | 15246 | 2.244252 | AGAACTACTCCCTCCGTACCAT | 59.756 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
8553 | 15247 | 1.637553 | AGAACTACTCCCTCCGTACCA | 59.362 | 52.381 | 0.00 | 0.00 | 0.00 | 3.25 |
8554 | 15248 | 2.433662 | AGAACTACTCCCTCCGTACC | 57.566 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
8555 | 15249 | 4.097135 | GGTTAAGAACTACTCCCTCCGTAC | 59.903 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
8556 | 15250 | 4.263905 | TGGTTAAGAACTACTCCCTCCGTA | 60.264 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
8557 | 15251 | 3.095332 | GGTTAAGAACTACTCCCTCCGT | 58.905 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
8558 | 15252 | 3.094572 | TGGTTAAGAACTACTCCCTCCG | 58.905 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
8559 | 15253 | 3.836562 | TGTGGTTAAGAACTACTCCCTCC | 59.163 | 47.826 | 7.27 | 0.00 | 42.63 | 4.30 |
8560 | 15254 | 5.479124 | TTGTGGTTAAGAACTACTCCCTC | 57.521 | 43.478 | 7.27 | 0.00 | 42.63 | 4.30 |
8561 | 15255 | 5.899631 | TTTGTGGTTAAGAACTACTCCCT | 57.100 | 39.130 | 7.27 | 0.00 | 42.63 | 4.20 |
8562 | 15256 | 6.293698 | TCTTTTGTGGTTAAGAACTACTCCC | 58.706 | 40.000 | 7.27 | 0.00 | 42.63 | 4.30 |
8563 | 15257 | 7.797038 | TTCTTTTGTGGTTAAGAACTACTCC | 57.203 | 36.000 | 7.27 | 0.00 | 42.63 | 3.85 |
8570 | 15264 | 4.201970 | CCGCAGTTCTTTTGTGGTTAAGAA | 60.202 | 41.667 | 0.00 | 0.00 | 40.50 | 2.52 |
8571 | 15265 | 3.314080 | CCGCAGTTCTTTTGTGGTTAAGA | 59.686 | 43.478 | 0.00 | 0.00 | 40.50 | 2.10 |
8572 | 15266 | 3.550030 | CCCGCAGTTCTTTTGTGGTTAAG | 60.550 | 47.826 | 4.36 | 0.00 | 43.16 | 1.85 |
8573 | 15267 | 2.359531 | CCCGCAGTTCTTTTGTGGTTAA | 59.640 | 45.455 | 4.36 | 0.00 | 43.16 | 2.01 |
8574 | 15268 | 1.950909 | CCCGCAGTTCTTTTGTGGTTA | 59.049 | 47.619 | 4.36 | 0.00 | 43.16 | 2.85 |
8575 | 15269 | 0.744281 | CCCGCAGTTCTTTTGTGGTT | 59.256 | 50.000 | 4.36 | 0.00 | 43.16 | 3.67 |
8576 | 15270 | 0.106918 | TCCCGCAGTTCTTTTGTGGT | 60.107 | 50.000 | 4.36 | 0.00 | 43.16 | 4.16 |
8577 | 15271 | 1.247567 | ATCCCGCAGTTCTTTTGTGG | 58.752 | 50.000 | 0.00 | 0.00 | 44.06 | 4.17 |
8578 | 15272 | 2.664916 | CAATCCCGCAGTTCTTTTGTG | 58.335 | 47.619 | 0.00 | 0.00 | 0.00 | 3.33 |
8579 | 15273 | 1.000274 | GCAATCCCGCAGTTCTTTTGT | 60.000 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
8580 | 15274 | 1.000385 | TGCAATCCCGCAGTTCTTTTG | 60.000 | 47.619 | 0.00 | 0.00 | 36.86 | 2.44 |
8581 | 15275 | 1.327303 | TGCAATCCCGCAGTTCTTTT | 58.673 | 45.000 | 0.00 | 0.00 | 36.86 | 2.27 |
8582 | 15276 | 3.034924 | TGCAATCCCGCAGTTCTTT | 57.965 | 47.368 | 0.00 | 0.00 | 36.86 | 2.52 |
8583 | 15277 | 4.819783 | TGCAATCCCGCAGTTCTT | 57.180 | 50.000 | 0.00 | 0.00 | 36.86 | 2.52 |
8589 | 15283 | 0.252761 | TTCAGATCTGCAATCCCGCA | 59.747 | 50.000 | 18.36 | 0.00 | 40.32 | 5.69 |
8590 | 15284 | 0.942962 | CTTCAGATCTGCAATCCCGC | 59.057 | 55.000 | 18.36 | 0.00 | 0.00 | 6.13 |
8591 | 15285 | 2.208431 | GACTTCAGATCTGCAATCCCG | 58.792 | 52.381 | 18.36 | 0.00 | 0.00 | 5.14 |
8592 | 15286 | 2.570135 | GGACTTCAGATCTGCAATCCC | 58.430 | 52.381 | 18.36 | 10.80 | 0.00 | 3.85 |
8593 | 15287 | 2.092753 | TGGGACTTCAGATCTGCAATCC | 60.093 | 50.000 | 18.36 | 15.82 | 0.00 | 3.01 |
8594 | 15288 | 3.272574 | TGGGACTTCAGATCTGCAATC | 57.727 | 47.619 | 18.36 | 6.56 | 0.00 | 2.67 |
8595 | 15289 | 3.947612 | ATGGGACTTCAGATCTGCAAT | 57.052 | 42.857 | 18.36 | 0.00 | 0.00 | 3.56 |
8596 | 15290 | 3.726557 | AATGGGACTTCAGATCTGCAA | 57.273 | 42.857 | 18.36 | 11.75 | 0.00 | 4.08 |
8597 | 15291 | 3.726557 | AAATGGGACTTCAGATCTGCA | 57.273 | 42.857 | 18.36 | 6.34 | 0.00 | 4.41 |
8598 | 15292 | 3.563390 | GCTAAATGGGACTTCAGATCTGC | 59.437 | 47.826 | 18.36 | 3.66 | 0.00 | 4.26 |
8599 | 15293 | 4.133078 | GGCTAAATGGGACTTCAGATCTG | 58.867 | 47.826 | 17.07 | 17.07 | 0.00 | 2.90 |
8600 | 15294 | 4.043596 | AGGCTAAATGGGACTTCAGATCT | 58.956 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
8601 | 15295 | 4.429854 | AGGCTAAATGGGACTTCAGATC | 57.570 | 45.455 | 0.00 | 0.00 | 0.00 | 2.75 |
8602 | 15296 | 4.870021 | AAGGCTAAATGGGACTTCAGAT | 57.130 | 40.909 | 0.00 | 0.00 | 0.00 | 2.90 |
8603 | 15297 | 4.534500 | TGTAAGGCTAAATGGGACTTCAGA | 59.466 | 41.667 | 0.00 | 0.00 | 33.63 | 3.27 |
8604 | 15298 | 4.843728 | TGTAAGGCTAAATGGGACTTCAG | 58.156 | 43.478 | 0.00 | 0.00 | 33.63 | 3.02 |
8605 | 15299 | 4.919774 | TGTAAGGCTAAATGGGACTTCA | 57.080 | 40.909 | 0.00 | 0.00 | 33.63 | 3.02 |
8606 | 15300 | 6.377146 | TGATTTGTAAGGCTAAATGGGACTTC | 59.623 | 38.462 | 0.00 | 0.00 | 33.63 | 3.01 |
8607 | 15301 | 6.252995 | TGATTTGTAAGGCTAAATGGGACTT | 58.747 | 36.000 | 0.00 | 0.00 | 35.96 | 3.01 |
8608 | 15302 | 5.826643 | TGATTTGTAAGGCTAAATGGGACT | 58.173 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
8609 | 15303 | 5.652452 | ACTGATTTGTAAGGCTAAATGGGAC | 59.348 | 40.000 | 0.00 | 0.00 | 0.00 | 4.46 |
8610 | 15304 | 5.826643 | ACTGATTTGTAAGGCTAAATGGGA | 58.173 | 37.500 | 0.00 | 0.00 | 0.00 | 4.37 |
8611 | 15305 | 6.238374 | CGTACTGATTTGTAAGGCTAAATGGG | 60.238 | 42.308 | 0.00 | 0.00 | 0.00 | 4.00 |
8612 | 15306 | 6.238374 | CCGTACTGATTTGTAAGGCTAAATGG | 60.238 | 42.308 | 0.00 | 0.00 | 35.84 | 3.16 |
8613 | 15307 | 6.315393 | ACCGTACTGATTTGTAAGGCTAAATG | 59.685 | 38.462 | 0.00 | 0.00 | 42.90 | 2.32 |
8614 | 15308 | 6.412214 | ACCGTACTGATTTGTAAGGCTAAAT | 58.588 | 36.000 | 6.56 | 0.00 | 42.90 | 1.40 |
8615 | 15309 | 5.797051 | ACCGTACTGATTTGTAAGGCTAAA | 58.203 | 37.500 | 6.56 | 0.00 | 42.90 | 1.85 |
8616 | 15310 | 5.047164 | TGACCGTACTGATTTGTAAGGCTAA | 60.047 | 40.000 | 6.56 | 0.00 | 42.90 | 3.09 |
8617 | 15311 | 4.463539 | TGACCGTACTGATTTGTAAGGCTA | 59.536 | 41.667 | 6.56 | 0.00 | 42.90 | 3.93 |
8618 | 15312 | 3.259876 | TGACCGTACTGATTTGTAAGGCT | 59.740 | 43.478 | 6.56 | 0.00 | 42.90 | 4.58 |
8619 | 15313 | 3.592059 | TGACCGTACTGATTTGTAAGGC | 58.408 | 45.455 | 6.56 | 2.06 | 42.90 | 4.35 |
8620 | 15314 | 3.617263 | GCTGACCGTACTGATTTGTAAGG | 59.383 | 47.826 | 5.38 | 5.38 | 44.07 | 2.69 |
8621 | 15315 | 3.303495 | CGCTGACCGTACTGATTTGTAAG | 59.697 | 47.826 | 0.00 | 0.00 | 0.00 | 2.34 |
8622 | 15316 | 3.247442 | CGCTGACCGTACTGATTTGTAA | 58.753 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
8623 | 15317 | 2.416296 | CCGCTGACCGTACTGATTTGTA | 60.416 | 50.000 | 0.00 | 0.00 | 34.38 | 2.41 |
8624 | 15318 | 1.671850 | CCGCTGACCGTACTGATTTGT | 60.672 | 52.381 | 0.00 | 0.00 | 34.38 | 2.83 |
8625 | 15319 | 0.999406 | CCGCTGACCGTACTGATTTG | 59.001 | 55.000 | 0.00 | 0.00 | 34.38 | 2.32 |
8626 | 15320 | 0.108329 | CCCGCTGACCGTACTGATTT | 60.108 | 55.000 | 0.00 | 0.00 | 34.38 | 2.17 |
8627 | 15321 | 0.968901 | TCCCGCTGACCGTACTGATT | 60.969 | 55.000 | 0.00 | 0.00 | 34.38 | 2.57 |
8628 | 15322 | 0.755698 | ATCCCGCTGACCGTACTGAT | 60.756 | 55.000 | 0.00 | 0.00 | 34.38 | 2.90 |
8629 | 15323 | 1.379443 | ATCCCGCTGACCGTACTGA | 60.379 | 57.895 | 0.00 | 0.00 | 34.38 | 3.41 |
8630 | 15324 | 1.226974 | CATCCCGCTGACCGTACTG | 60.227 | 63.158 | 0.00 | 0.00 | 34.38 | 2.74 |
8631 | 15325 | 2.423898 | CCATCCCGCTGACCGTACT | 61.424 | 63.158 | 0.00 | 0.00 | 34.38 | 2.73 |
8632 | 15326 | 2.106332 | CCATCCCGCTGACCGTAC | 59.894 | 66.667 | 0.00 | 0.00 | 34.38 | 3.67 |
8633 | 15327 | 3.845259 | GCCATCCCGCTGACCGTA | 61.845 | 66.667 | 0.00 | 0.00 | 34.38 | 4.02 |
8636 | 15330 | 3.112205 | ATCTGCCATCCCGCTGACC | 62.112 | 63.158 | 0.00 | 0.00 | 39.20 | 4.02 |
8637 | 15331 | 1.596477 | GATCTGCCATCCCGCTGAC | 60.596 | 63.158 | 0.00 | 0.00 | 39.20 | 3.51 |
8638 | 15332 | 1.763655 | AGATCTGCCATCCCGCTGA | 60.764 | 57.895 | 0.00 | 0.00 | 40.43 | 4.26 |
8639 | 15333 | 1.597302 | CAGATCTGCCATCCCGCTG | 60.597 | 63.158 | 10.38 | 0.00 | 0.00 | 5.18 |
8640 | 15334 | 1.340399 | TTCAGATCTGCCATCCCGCT | 61.340 | 55.000 | 18.36 | 0.00 | 0.00 | 5.52 |
8641 | 15335 | 0.883814 | CTTCAGATCTGCCATCCCGC | 60.884 | 60.000 | 18.36 | 0.00 | 0.00 | 6.13 |
8642 | 15336 | 0.467384 | ACTTCAGATCTGCCATCCCG | 59.533 | 55.000 | 18.36 | 3.50 | 0.00 | 5.14 |
8643 | 15337 | 1.202746 | GGACTTCAGATCTGCCATCCC | 60.203 | 57.143 | 18.36 | 10.80 | 0.00 | 3.85 |
8644 | 15338 | 1.202746 | GGGACTTCAGATCTGCCATCC | 60.203 | 57.143 | 18.36 | 20.46 | 0.00 | 3.51 |
8645 | 15339 | 1.487976 | TGGGACTTCAGATCTGCCATC | 59.512 | 52.381 | 18.36 | 13.40 | 0.00 | 3.51 |
8646 | 15340 | 1.588239 | TGGGACTTCAGATCTGCCAT | 58.412 | 50.000 | 18.36 | 5.01 | 0.00 | 4.40 |
8647 | 15341 | 1.588239 | ATGGGACTTCAGATCTGCCA | 58.412 | 50.000 | 18.36 | 18.10 | 0.00 | 4.92 |
8648 | 15342 | 2.725221 | AATGGGACTTCAGATCTGCC | 57.275 | 50.000 | 18.36 | 12.72 | 0.00 | 4.85 |
8649 | 15343 | 4.012374 | TCAAAATGGGACTTCAGATCTGC | 58.988 | 43.478 | 18.36 | 3.66 | 0.00 | 4.26 |
8650 | 15344 | 5.353678 | GTCTCAAAATGGGACTTCAGATCTG | 59.646 | 44.000 | 17.07 | 17.07 | 44.30 | 2.90 |
8651 | 15345 | 5.495640 | GTCTCAAAATGGGACTTCAGATCT | 58.504 | 41.667 | 3.14 | 0.00 | 44.30 | 2.75 |
8652 | 15346 | 5.809719 | GTCTCAAAATGGGACTTCAGATC | 57.190 | 43.478 | 3.14 | 0.00 | 44.30 | 2.75 |
8661 | 15355 | 7.673504 | TCCTTCAATTATTGTCTCAAAATGGGA | 59.326 | 33.333 | 4.77 | 0.00 | 0.00 | 4.37 |
8662 | 15356 | 7.761249 | GTCCTTCAATTATTGTCTCAAAATGGG | 59.239 | 37.037 | 4.77 | 0.00 | 0.00 | 4.00 |
8663 | 15357 | 8.306038 | TGTCCTTCAATTATTGTCTCAAAATGG | 58.694 | 33.333 | 4.77 | 0.00 | 0.00 | 3.16 |
8664 | 15358 | 9.350357 | CTGTCCTTCAATTATTGTCTCAAAATG | 57.650 | 33.333 | 4.77 | 0.00 | 0.00 | 2.32 |
8665 | 15359 | 9.300681 | TCTGTCCTTCAATTATTGTCTCAAAAT | 57.699 | 29.630 | 4.77 | 0.00 | 0.00 | 1.82 |
8666 | 15360 | 8.690203 | TCTGTCCTTCAATTATTGTCTCAAAA | 57.310 | 30.769 | 4.77 | 0.00 | 0.00 | 2.44 |
8667 | 15361 | 8.733458 | CATCTGTCCTTCAATTATTGTCTCAAA | 58.267 | 33.333 | 4.77 | 0.00 | 0.00 | 2.69 |
8668 | 15362 | 7.337689 | CCATCTGTCCTTCAATTATTGTCTCAA | 59.662 | 37.037 | 4.77 | 0.00 | 0.00 | 3.02 |
8669 | 15363 | 6.825213 | CCATCTGTCCTTCAATTATTGTCTCA | 59.175 | 38.462 | 4.77 | 0.00 | 0.00 | 3.27 |
8670 | 15364 | 6.825721 | ACCATCTGTCCTTCAATTATTGTCTC | 59.174 | 38.462 | 4.77 | 0.00 | 0.00 | 3.36 |
8671 | 15365 | 6.600822 | CACCATCTGTCCTTCAATTATTGTCT | 59.399 | 38.462 | 4.77 | 0.00 | 0.00 | 3.41 |
8672 | 15366 | 6.375455 | ACACCATCTGTCCTTCAATTATTGTC | 59.625 | 38.462 | 4.77 | 0.00 | 0.00 | 3.18 |
8673 | 15367 | 6.248433 | ACACCATCTGTCCTTCAATTATTGT | 58.752 | 36.000 | 4.77 | 0.00 | 0.00 | 2.71 |
8674 | 15368 | 6.764308 | ACACCATCTGTCCTTCAATTATTG | 57.236 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
8675 | 15369 | 6.721208 | ACAACACCATCTGTCCTTCAATTATT | 59.279 | 34.615 | 0.00 | 0.00 | 30.29 | 1.40 |
8676 | 15370 | 6.248433 | ACAACACCATCTGTCCTTCAATTAT | 58.752 | 36.000 | 0.00 | 0.00 | 30.29 | 1.28 |
8677 | 15371 | 5.630121 | ACAACACCATCTGTCCTTCAATTA | 58.370 | 37.500 | 0.00 | 0.00 | 30.29 | 1.40 |
8678 | 15372 | 4.473444 | ACAACACCATCTGTCCTTCAATT | 58.527 | 39.130 | 0.00 | 0.00 | 30.29 | 2.32 |
8679 | 15373 | 4.074970 | GACAACACCATCTGTCCTTCAAT | 58.925 | 43.478 | 0.00 | 0.00 | 36.72 | 2.57 |
8680 | 15374 | 3.136443 | AGACAACACCATCTGTCCTTCAA | 59.864 | 43.478 | 0.00 | 0.00 | 42.45 | 2.69 |
8681 | 15375 | 2.705658 | AGACAACACCATCTGTCCTTCA | 59.294 | 45.455 | 0.00 | 0.00 | 42.45 | 3.02 |
8682 | 15376 | 3.409026 | AGACAACACCATCTGTCCTTC | 57.591 | 47.619 | 0.00 | 0.00 | 42.45 | 3.46 |
8683 | 15377 | 3.864789 | AAGACAACACCATCTGTCCTT | 57.135 | 42.857 | 0.00 | 0.00 | 42.45 | 3.36 |
8684 | 15378 | 3.864789 | AAAGACAACACCATCTGTCCT | 57.135 | 42.857 | 0.00 | 0.00 | 42.45 | 3.85 |
8685 | 15379 | 4.642429 | AGTAAAGACAACACCATCTGTCC | 58.358 | 43.478 | 0.00 | 0.00 | 42.45 | 4.02 |
8686 | 15380 | 4.691216 | GGAGTAAAGACAACACCATCTGTC | 59.309 | 45.833 | 0.00 | 0.00 | 41.90 | 3.51 |
8687 | 15381 | 4.102524 | TGGAGTAAAGACAACACCATCTGT | 59.897 | 41.667 | 0.00 | 0.00 | 33.40 | 3.41 |
8688 | 15382 | 4.641396 | TGGAGTAAAGACAACACCATCTG | 58.359 | 43.478 | 0.00 | 0.00 | 33.40 | 2.90 |
8689 | 15383 | 4.348168 | ACTGGAGTAAAGACAACACCATCT | 59.652 | 41.667 | 0.00 | 0.00 | 37.05 | 2.90 |
8690 | 15384 | 4.452455 | CACTGGAGTAAAGACAACACCATC | 59.548 | 45.833 | 0.00 | 0.00 | 37.05 | 3.51 |
8691 | 15385 | 4.102524 | TCACTGGAGTAAAGACAACACCAT | 59.897 | 41.667 | 0.00 | 0.00 | 37.05 | 3.55 |
8692 | 15386 | 3.452990 | TCACTGGAGTAAAGACAACACCA | 59.547 | 43.478 | 0.00 | 0.00 | 35.57 | 4.17 |
8693 | 15387 | 4.067972 | TCACTGGAGTAAAGACAACACC | 57.932 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
8694 | 15388 | 6.431198 | TTTTCACTGGAGTAAAGACAACAC | 57.569 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
8695 | 15389 | 6.826231 | TGATTTTCACTGGAGTAAAGACAACA | 59.174 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
8696 | 15390 | 7.259290 | TGATTTTCACTGGAGTAAAGACAAC | 57.741 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
8697 | 15391 | 7.939039 | AGATGATTTTCACTGGAGTAAAGACAA | 59.061 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
8698 | 15392 | 7.453393 | AGATGATTTTCACTGGAGTAAAGACA | 58.547 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
8699 | 15393 | 7.913674 | AGATGATTTTCACTGGAGTAAAGAC | 57.086 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
8700 | 15394 | 7.094634 | GCAAGATGATTTTCACTGGAGTAAAGA | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
8721 | 15415 | 5.581605 | CAGCTCTTAACAACAAAAGCAAGA | 58.418 | 37.500 | 0.00 | 0.00 | 32.25 | 3.02 |
8757 | 15452 | 5.228665 | TGAAATGTTTGTACCGTACATCGA | 58.771 | 37.500 | 12.14 | 0.00 | 42.86 | 3.59 |
8766 | 15461 | 2.295909 | TGCCTGCTGAAATGTTTGTACC | 59.704 | 45.455 | 0.00 | 0.00 | 0.00 | 3.34 |
8795 | 15490 | 0.746063 | TGCTTGCAAACTCTGGGTTG | 59.254 | 50.000 | 0.00 | 0.00 | 38.29 | 3.77 |
8822 | 15517 | 3.315470 | CGGTTAGATTCGACAGAGGATCA | 59.685 | 47.826 | 0.00 | 0.00 | 37.82 | 2.92 |
8823 | 15518 | 3.564644 | TCGGTTAGATTCGACAGAGGATC | 59.435 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
8824 | 15519 | 3.552875 | TCGGTTAGATTCGACAGAGGAT | 58.447 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
8845 | 15540 | 4.262938 | GGGTAGTGTTTCAGTAAGGAAGCT | 60.263 | 45.833 | 0.00 | 0.00 | 0.00 | 3.74 |
8868 | 15567 | 3.128242 | GCTGATGAAAGGTCATGAAGTGG | 59.872 | 47.826 | 0.00 | 0.00 | 44.83 | 4.00 |
8878 | 15577 | 2.787473 | TTGATCGGCTGATGAAAGGT | 57.213 | 45.000 | 14.17 | 0.00 | 34.09 | 3.50 |
8915 | 15633 | 4.034510 | GGAAGAACTACTGCAATTGATCGG | 59.965 | 45.833 | 10.34 | 0.00 | 0.00 | 4.18 |
8916 | 15634 | 4.259970 | CGGAAGAACTACTGCAATTGATCG | 60.260 | 45.833 | 10.34 | 0.00 | 0.00 | 3.69 |
8918 | 15636 | 3.375299 | GCGGAAGAACTACTGCAATTGAT | 59.625 | 43.478 | 10.34 | 0.00 | 38.17 | 2.57 |
8920 | 15638 | 2.474526 | CGCGGAAGAACTACTGCAATTG | 60.475 | 50.000 | 0.00 | 0.00 | 38.17 | 2.32 |
8921 | 15639 | 1.732259 | CGCGGAAGAACTACTGCAATT | 59.268 | 47.619 | 0.00 | 0.00 | 38.17 | 2.32 |
8922 | 15640 | 1.359848 | CGCGGAAGAACTACTGCAAT | 58.640 | 50.000 | 0.00 | 0.00 | 38.17 | 3.56 |
8923 | 15641 | 0.669318 | CCGCGGAAGAACTACTGCAA | 60.669 | 55.000 | 24.07 | 0.00 | 38.17 | 4.08 |
8924 | 15642 | 1.080093 | CCGCGGAAGAACTACTGCA | 60.080 | 57.895 | 24.07 | 0.00 | 38.17 | 4.41 |
8925 | 15643 | 0.669625 | AACCGCGGAAGAACTACTGC | 60.670 | 55.000 | 35.90 | 0.00 | 35.37 | 4.40 |
8926 | 15644 | 1.459592 | CAAACCGCGGAAGAACTACTG | 59.540 | 52.381 | 35.90 | 10.57 | 0.00 | 2.74 |
8941 | 15659 | 3.518303 | AGTACCAGATACCACCTCAAACC | 59.482 | 47.826 | 0.00 | 0.00 | 33.85 | 3.27 |
8945 | 15663 | 3.468071 | ACAGTACCAGATACCACCTCA | 57.532 | 47.619 | 0.00 | 0.00 | 33.85 | 3.86 |
9014 | 15732 | 2.344950 | GACAGCATCAGTGGTTCTCTG | 58.655 | 52.381 | 0.00 | 0.00 | 32.81 | 3.35 |
9034 | 15752 | 2.762535 | AGGTCTCGTGGTGTTAATGG | 57.237 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
9083 | 15801 | 5.331235 | GCCGTGTTAATTTTCAACAGTTTCG | 60.331 | 40.000 | 0.00 | 0.00 | 36.61 | 3.46 |
9089 | 15807 | 4.902443 | TGAGCCGTGTTAATTTTCAACA | 57.098 | 36.364 | 0.00 | 0.00 | 33.61 | 3.33 |
9120 | 15838 | 5.011533 | ACCAAATAGATGAATCCCTCTCGAG | 59.988 | 44.000 | 5.93 | 5.93 | 0.00 | 4.04 |
9121 | 15839 | 4.901849 | ACCAAATAGATGAATCCCTCTCGA | 59.098 | 41.667 | 0.00 | 0.00 | 0.00 | 4.04 |
9122 | 15840 | 5.220710 | ACCAAATAGATGAATCCCTCTCG | 57.779 | 43.478 | 0.00 | 0.00 | 0.00 | 4.04 |
9123 | 15841 | 6.169800 | GCTACCAAATAGATGAATCCCTCTC | 58.830 | 44.000 | 0.00 | 0.00 | 31.83 | 3.20 |
9146 | 15864 | 0.673985 | GGTGTTGTCTTCCCTTTGGC | 59.326 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.