Multiple sequence alignment - TraesCS7B01G014100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G014100 chr7B 100.000 3986 0 0 1 3986 10581056 10585041 0.000000e+00 7361.0
1 TraesCS7B01G014100 chr7B 94.693 1451 55 6 832 2267 7560835 7559392 0.000000e+00 2233.0
2 TraesCS7B01G014100 chr7B 92.550 349 20 1 1174 1516 622577178 622577526 2.770000e-136 496.0
3 TraesCS7B01G014100 chr7B 91.977 349 22 1 1174 1516 702697177 702697525 5.990000e-133 484.0
4 TraesCS7B01G014100 chr7B 80.680 647 83 23 838 1471 10101909 10102526 7.800000e-127 464.0
5 TraesCS7B01G014100 chr7B 90.258 349 28 1 1174 1516 154311556 154311208 6.070000e-123 451.0
6 TraesCS7B01G014100 chr7B 79.416 651 91 26 837 1471 9811324 9811947 1.710000e-113 420.0
7 TraesCS7B01G014100 chr7B 81.532 509 70 15 965 1471 10208458 10208944 8.030000e-107 398.0
8 TraesCS7B01G014100 chr7B 89.389 311 28 5 3485 3794 7558193 7557887 1.740000e-103 387.0
9 TraesCS7B01G014100 chr7B 98.387 186 3 0 2315 2500 130903261 130903076 1.070000e-85 327.0
10 TraesCS7B01G014100 chr7B 92.511 227 17 0 2585 2811 130903078 130902852 3.840000e-85 326.0
11 TraesCS7B01G014100 chr7B 95.122 205 8 1 1981 2185 154310240 154310038 4.970000e-84 322.0
12 TraesCS7B01G014100 chr7B 94.712 208 8 2 1978 2185 702698485 702698689 1.790000e-83 320.0
13 TraesCS7B01G014100 chr7B 90.000 160 15 1 2864 3022 7558839 7558680 5.220000e-49 206.0
14 TraesCS7B01G014100 chr7B 95.614 114 5 0 3013 3126 7558656 7558543 2.450000e-42 183.0
15 TraesCS7B01G014100 chr7B 82.192 146 25 1 2864 3008 10103526 10103671 1.500000e-24 124.0
16 TraesCS7B01G014100 chr7B 81.579 152 27 1 2864 3014 10210296 10210447 1.500000e-24 124.0
17 TraesCS7B01G014100 chr7B 94.737 38 2 0 2451 2488 674196718 674196755 4.300000e-05 60.2
18 TraesCS7B01G014100 chr7A 87.817 1182 76 31 791 1911 70806082 70804908 0.000000e+00 1323.0
19 TraesCS7B01G014100 chr7A 88.730 976 60 22 985 1931 74668984 74669938 0.000000e+00 1147.0
20 TraesCS7B01G014100 chr7A 88.819 474 29 3 3398 3871 70780405 70779956 9.670000e-156 560.0
21 TraesCS7B01G014100 chr7A 86.618 411 25 8 3013 3398 70780837 70780432 1.020000e-115 427.0
22 TraesCS7B01G014100 chr7A 79.095 641 89 31 837 1471 74601101 74601702 2.230000e-107 399.0
23 TraesCS7B01G014100 chr7A 92.171 281 13 2 1905 2185 95468376 95468647 4.830000e-104 388.0
24 TraesCS7B01G014100 chr7A 91.815 281 14 2 1905 2185 70451055 70450784 2.250000e-102 383.0
25 TraesCS7B01G014100 chr7A 90.747 281 17 2 1905 2185 655611871 655611600 2.260000e-97 366.0
26 TraesCS7B01G014100 chr7A 91.739 230 14 2 2634 2859 645738567 645738339 8.320000e-82 315.0
27 TraesCS7B01G014100 chr7A 91.489 141 11 1 3013 3152 74671078 74671218 4.070000e-45 193.0
28 TraesCS7B01G014100 chr7A 92.537 134 9 1 2864 2996 70781034 70780901 1.460000e-44 191.0
29 TraesCS7B01G014100 chr7A 77.151 372 47 23 1959 2326 645738955 645738618 8.800000e-42 182.0
30 TraesCS7B01G014100 chr7A 86.667 135 8 2 791 925 74668842 74668966 1.490000e-29 141.0
31 TraesCS7B01G014100 chr7A 85.294 136 18 2 3007 3141 70894994 70894860 5.370000e-29 139.0
32 TraesCS7B01G014100 chr7A 96.203 79 3 0 2228 2306 70450786 70450708 3.230000e-26 130.0
33 TraesCS7B01G014100 chr7A 96.203 79 3 0 2228 2306 95468645 95468723 3.230000e-26 130.0
34 TraesCS7B01G014100 chr7A 83.704 135 4 9 2228 2344 655611602 655611468 1.170000e-20 111.0
35 TraesCS7B01G014100 chr7A 98.113 53 1 0 3623 3675 74671474 74671526 4.240000e-15 93.5
36 TraesCS7B01G014100 chr7A 89.831 59 6 0 2391 2449 74670297 74670355 4.270000e-10 76.8
37 TraesCS7B01G014100 chr7A 93.333 45 3 0 1769 1813 74593334 74593378 2.570000e-07 67.6
38 TraesCS7B01G014100 chr7A 97.059 34 1 0 2455 2488 41423582 41423615 1.550000e-04 58.4
39 TraesCS7B01G014100 chr7D 87.662 1159 85 33 791 1934 66376123 66375008 0.000000e+00 1295.0
40 TraesCS7B01G014100 chr7D 86.309 913 47 37 832 1721 69012800 69013657 0.000000e+00 922.0
41 TraesCS7B01G014100 chr7D 89.635 521 36 9 2800 3316 69014167 69014673 0.000000e+00 647.0
42 TraesCS7B01G014100 chr7D 86.759 506 47 2 3475 3979 69014836 69015322 2.710000e-151 545.0
43 TraesCS7B01G014100 chr7D 86.404 456 38 5 3532 3986 66373533 66373101 1.000000e-130 477.0
44 TraesCS7B01G014100 chr7D 85.281 462 38 10 2862 3319 66374319 66373884 2.180000e-122 449.0
45 TraesCS7B01G014100 chr7D 82.645 484 63 12 991 1471 66517115 66516650 3.710000e-110 409.0
46 TraesCS7B01G014100 chr7D 93.156 263 14 3 2032 2294 69013652 69013910 2.250000e-102 383.0
47 TraesCS7B01G014100 chr7D 87.500 136 16 1 3013 3148 66514315 66514181 5.330000e-34 156.0
48 TraesCS7B01G014100 chr7D 84.921 126 19 0 2892 3017 66515581 66515456 1.160000e-25 128.0
49 TraesCS7B01G014100 chr7D 77.731 238 29 12 2864 3079 68921599 68921834 1.500000e-24 124.0
50 TraesCS7B01G014100 chr7D 87.143 70 5 2 837 906 68801546 68801611 4.270000e-10 76.8
51 TraesCS7B01G014100 chr7D 93.333 45 3 0 1769 1813 68902745 68902789 2.570000e-07 67.6
52 TraesCS7B01G014100 chrUn 87.218 798 50 19 2529 3316 84524589 84525344 0.000000e+00 861.0
53 TraesCS7B01G014100 chrUn 85.965 513 52 2 3475 3986 84525531 84526024 7.580000e-147 531.0
54 TraesCS7B01G014100 chrUn 94.902 255 12 1 436 689 299178873 299178619 8.030000e-107 398.0
55 TraesCS7B01G014100 chrUn 94.902 255 12 1 436 689 310333668 310333414 8.030000e-107 398.0
56 TraesCS7B01G014100 chrUn 86.038 265 31 6 1 262 112381916 112382177 3.030000e-71 279.0
57 TraesCS7B01G014100 chrUn 87.149 249 22 5 2050 2298 84524308 84524546 1.410000e-69 274.0
58 TraesCS7B01G014100 chrUn 95.092 163 7 1 1769 1931 84524073 84524234 5.110000e-64 255.0
59 TraesCS7B01G014100 chrUn 87.248 149 5 5 2535 2683 423877378 423877244 1.480000e-34 158.0
60 TraesCS7B01G014100 chr2A 81.101 672 89 18 836 1471 84748933 84749602 1.650000e-138 503.0
61 TraesCS7B01G014100 chr2A 93.103 261 17 1 435 694 765886014 765885754 8.080000e-102 381.0
62 TraesCS7B01G014100 chr2A 82.019 317 47 8 1 313 150446264 150445954 1.100000e-65 261.0
63 TraesCS7B01G014100 chr1A 92.394 355 21 1 1174 1522 61237132 61236778 5.950000e-138 501.0
64 TraesCS7B01G014100 chr1A 91.815 281 12 3 1905 2185 424484570 424484301 8.080000e-102 381.0
65 TraesCS7B01G014100 chr1A 91.103 281 16 2 1905 2185 61236248 61235977 4.860000e-99 372.0
66 TraesCS7B01G014100 chr1A 90.722 291 8 7 2228 2500 591449042 591449331 1.750000e-98 370.0
67 TraesCS7B01G014100 chr1A 89.655 261 22 3 2585 2840 591449329 591449589 1.070000e-85 327.0
68 TraesCS7B01G014100 chr1A 94.937 79 4 0 2228 2306 424484303 424484225 1.500000e-24 124.0
69 TraesCS7B01G014100 chr1A 93.750 80 4 1 2228 2306 61235979 61235900 7.000000e-23 119.0
70 TraesCS7B01G014100 chr6B 92.264 349 21 1 1174 1516 521450234 521450582 1.290000e-134 490.0
71 TraesCS7B01G014100 chr6B 84.528 265 34 7 1 262 78576098 78575838 5.110000e-64 255.0
72 TraesCS7B01G014100 chr6B 82.993 294 22 11 2133 2406 135304062 135304347 1.430000e-59 241.0
73 TraesCS7B01G014100 chr6B 95.122 41 2 0 2448 2488 637180100 637180140 9.250000e-07 65.8
74 TraesCS7B01G014100 chr1B 90.857 350 24 4 1174 1516 72054271 72054619 2.810000e-126 462.0
75 TraesCS7B01G014100 chr1B 79.879 661 89 28 837 1471 678116393 678115751 1.020000e-120 444.0
76 TraesCS7B01G014100 chr1B 94.510 255 13 1 436 689 41793673 41793927 3.730000e-105 392.0
77 TraesCS7B01G014100 chr1D 79.635 658 87 30 837 1471 486926547 486925914 2.850000e-116 429.0
78 TraesCS7B01G014100 chr1D 77.346 309 48 12 2897 3190 486923393 486923092 3.190000e-36 163.0
79 TraesCS7B01G014100 chr1D 87.248 149 5 5 2535 2683 408522890 408522756 1.480000e-34 158.0
80 TraesCS7B01G014100 chr4A 96.311 244 9 0 435 678 615435274 615435031 6.200000e-108 401.0
81 TraesCS7B01G014100 chr2D 95.473 243 11 0 436 678 6521170 6521412 4.830000e-104 388.0
82 TraesCS7B01G014100 chr2D 94.094 254 15 0 435 688 541547531 541547278 1.740000e-103 387.0
83 TraesCS7B01G014100 chr2D 82.436 427 29 20 1970 2376 260140230 260140630 8.260000e-87 331.0
84 TraesCS7B01G014100 chr2D 90.310 258 11 5 2535 2792 427948090 427947847 3.840000e-85 326.0
85 TraesCS7B01G014100 chr2D 86.452 155 7 5 2529 2683 142706422 142706562 1.480000e-34 158.0
86 TraesCS7B01G014100 chr2D 86.452 155 7 5 2529 2683 144459722 144459862 1.480000e-34 158.0
87 TraesCS7B01G014100 chr2D 87.248 149 5 5 2535 2683 288992501 288992367 1.480000e-34 158.0
88 TraesCS7B01G014100 chr3A 91.815 281 14 3 1905 2185 129249213 129248942 2.250000e-102 383.0
89 TraesCS7B01G014100 chr3A 92.424 264 17 2 425 686 300127478 300127740 1.350000e-99 374.0
90 TraesCS7B01G014100 chr3A 90.698 258 10 5 2535 2792 530203636 530203393 8.260000e-87 331.0
91 TraesCS7B01G014100 chr3A 82.653 294 24 9 2133 2406 36517812 36517526 6.660000e-58 235.0
92 TraesCS7B01G014100 chr4D 92.135 267 20 1 430 695 338713827 338714093 3.760000e-100 375.0
93 TraesCS7B01G014100 chr4D 85.806 155 8 5 2529 2683 486435258 486435398 6.900000e-33 152.0
94 TraesCS7B01G014100 chr2B 91.667 276 9 5 2535 2810 796606955 796606694 1.750000e-98 370.0
95 TraesCS7B01G014100 chr2B 91.304 276 10 5 2535 2810 800714626 800714365 8.140000e-97 364.0
96 TraesCS7B01G014100 chr2B 82.507 343 47 10 2 339 495815621 495815287 5.040000e-74 289.0
97 TraesCS7B01G014100 chr6A 91.571 261 17 3 2585 2840 76580463 76580723 4.900000e-94 355.0
98 TraesCS7B01G014100 chr5B 93.450 229 15 0 2585 2813 89070011 89069783 1.370000e-89 340.0
99 TraesCS7B01G014100 chr5B 97.849 186 4 0 2315 2500 89070194 89070009 4.970000e-84 322.0
100 TraesCS7B01G014100 chr3B 82.785 395 55 10 2 387 450362304 450362694 1.370000e-89 340.0
101 TraesCS7B01G014100 chr3B 78.795 415 62 19 36 437 450362520 450362921 5.110000e-64 255.0
102 TraesCS7B01G014100 chr3B 81.308 321 49 8 40 355 543154283 543153969 2.380000e-62 250.0
103 TraesCS7B01G014100 chr3B 76.842 285 35 15 100 382 543154267 543154012 8.990000e-27 132.0
104 TraesCS7B01G014100 chr3D 83.333 372 50 9 2 367 352080564 352080929 2.300000e-87 333.0
105 TraesCS7B01G014100 chr3D 80.055 361 59 9 1 355 417123686 417123333 5.110000e-64 255.0
106 TraesCS7B01G014100 chr4B 84.133 271 23 13 2133 2383 155552270 155552540 1.110000e-60 244.0
107 TraesCS7B01G014100 chr4B 83.333 264 23 8 2133 2376 661349016 661349278 1.440000e-54 224.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G014100 chr7B 10581056 10585041 3985 False 7361.000000 7361 100.000000 1 3986 1 chr7B.!!$F2 3985
1 TraesCS7B01G014100 chr7B 7557887 7560835 2948 True 752.250000 2233 92.424000 832 3794 4 chr7B.!!$R1 2962
2 TraesCS7B01G014100 chr7B 9811324 9811947 623 False 420.000000 420 79.416000 837 1471 1 chr7B.!!$F1 634
3 TraesCS7B01G014100 chr7B 702697177 702698689 1512 False 402.000000 484 93.344500 1174 2185 2 chr7B.!!$F7 1011
4 TraesCS7B01G014100 chr7B 154310038 154311556 1518 True 386.500000 451 92.690000 1174 2185 2 chr7B.!!$R3 1011
5 TraesCS7B01G014100 chr7B 10101909 10103671 1762 False 294.000000 464 81.436000 838 3008 2 chr7B.!!$F5 2170
6 TraesCS7B01G014100 chr7B 10208458 10210447 1989 False 261.000000 398 81.555500 965 3014 2 chr7B.!!$F6 2049
7 TraesCS7B01G014100 chr7A 70804908 70806082 1174 True 1323.000000 1323 87.817000 791 1911 1 chr7A.!!$R1 1120
8 TraesCS7B01G014100 chr7A 74601101 74601702 601 False 399.000000 399 79.095000 837 1471 1 chr7A.!!$F3 634
9 TraesCS7B01G014100 chr7A 70779956 70781034 1078 True 392.666667 560 89.324667 2864 3871 3 chr7A.!!$R4 1007
10 TraesCS7B01G014100 chr7A 74668842 74671526 2684 False 330.260000 1147 90.966000 791 3675 5 chr7A.!!$F4 2884
11 TraesCS7B01G014100 chr7A 645738339 645738955 616 True 248.500000 315 84.445000 1959 2859 2 chr7A.!!$R5 900
12 TraesCS7B01G014100 chr7D 66373101 66376123 3022 True 740.333333 1295 86.449000 791 3986 3 chr7D.!!$R1 3195
13 TraesCS7B01G014100 chr7D 69012800 69015322 2522 False 624.250000 922 88.964750 832 3979 4 chr7D.!!$F4 3147
14 TraesCS7B01G014100 chr7D 66514181 66517115 2934 True 231.000000 409 85.022000 991 3148 3 chr7D.!!$R2 2157
15 TraesCS7B01G014100 chrUn 84524073 84526024 1951 False 480.250000 861 88.856000 1769 3986 4 chrUn.!!$F2 2217
16 TraesCS7B01G014100 chr2A 84748933 84749602 669 False 503.000000 503 81.101000 836 1471 1 chr2A.!!$F1 635
17 TraesCS7B01G014100 chr1A 591449042 591449589 547 False 348.500000 370 90.188500 2228 2840 2 chr1A.!!$F1 612
18 TraesCS7B01G014100 chr1A 61235900 61237132 1232 True 330.666667 501 92.415667 1174 2306 3 chr1A.!!$R1 1132
19 TraesCS7B01G014100 chr1B 678115751 678116393 642 True 444.000000 444 79.879000 837 1471 1 chr1B.!!$R1 634
20 TraesCS7B01G014100 chr1D 486923092 486926547 3455 True 296.000000 429 78.490500 837 3190 2 chr1D.!!$R2 2353
21 TraesCS7B01G014100 chr3B 450362304 450362921 617 False 297.500000 340 80.790000 2 437 2 chr3B.!!$F1 435

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
547 549 0.091344 CGAGCGCTCAACACGTTTAG 59.909 55.0 34.69 12.34 0.00 1.85 F
1541 1871 0.111446 TTCTTGGCATCCGAACCCAA 59.889 50.0 0.00 3.82 37.13 4.12 F
1542 1872 0.608035 TCTTGGCATCCGAACCCAAC 60.608 55.0 0.00 0.00 35.02 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1641 2056 0.033504 TTGAGTCTCGTTGTCAGGGC 59.966 55.0 0.0 0.0 0.00 5.19 R
2609 4707 0.250295 ACTTACAGCACACGCATGGT 60.250 50.0 0.0 0.0 42.27 3.55 R
3387 6731 0.517316 GAGAACAATGGTGTCGTGGC 59.483 55.0 0.0 0.0 36.80 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 80 9.773328 ACATGATCAACAATTTTTCTATACACG 57.227 29.630 0.00 0.00 0.00 4.49
79 81 9.773328 CATGATCAACAATTTTTCTATACACGT 57.227 29.630 0.00 0.00 0.00 4.49
81 83 9.820229 TGATCAACAATTTTTCTATACACGTTC 57.180 29.630 0.00 0.00 0.00 3.95
82 84 9.820229 GATCAACAATTTTTCTATACACGTTCA 57.180 29.630 0.00 0.00 0.00 3.18
84 86 9.440784 TCAACAATTTTTCTATACACGTTCAAC 57.559 29.630 0.00 0.00 0.00 3.18
85 87 9.227490 CAACAATTTTTCTATACACGTTCAACA 57.773 29.630 0.00 0.00 0.00 3.33
86 88 9.959749 AACAATTTTTCTATACACGTTCAACAT 57.040 25.926 0.00 0.00 0.00 2.71
87 89 9.959749 ACAATTTTTCTATACACGTTCAACATT 57.040 25.926 0.00 0.00 0.00 2.71
92 94 9.658475 TTTTCTATACACGTTCAACATTTTCTG 57.342 29.630 0.00 0.00 0.00 3.02
93 95 8.596271 TTCTATACACGTTCAACATTTTCTGA 57.404 30.769 0.00 0.00 0.00 3.27
94 96 8.596271 TCTATACACGTTCAACATTTTCTGAA 57.404 30.769 0.00 0.00 0.00 3.02
95 97 9.214957 TCTATACACGTTCAACATTTTCTGAAT 57.785 29.630 0.00 0.00 34.26 2.57
96 98 9.265938 CTATACACGTTCAACATTTTCTGAATG 57.734 33.333 0.00 3.15 42.03 2.67
97 99 4.739716 ACACGTTCAACATTTTCTGAATGC 59.260 37.500 4.37 0.00 40.65 3.56
98 100 4.977963 CACGTTCAACATTTTCTGAATGCT 59.022 37.500 4.37 0.00 40.65 3.79
99 101 5.459762 CACGTTCAACATTTTCTGAATGCTT 59.540 36.000 4.37 0.00 40.65 3.91
100 102 5.459762 ACGTTCAACATTTTCTGAATGCTTG 59.540 36.000 4.37 4.11 40.65 4.01
101 103 5.686841 CGTTCAACATTTTCTGAATGCTTGA 59.313 36.000 0.00 10.11 34.26 3.02
102 104 6.364165 CGTTCAACATTTTCTGAATGCTTGAT 59.636 34.615 12.76 0.00 34.26 2.57
103 105 7.095940 CGTTCAACATTTTCTGAATGCTTGATT 60.096 33.333 12.76 0.00 34.26 2.57
104 106 9.195411 GTTCAACATTTTCTGAATGCTTGATTA 57.805 29.630 12.76 3.38 34.26 1.75
105 107 9.761504 TTCAACATTTTCTGAATGCTTGATTAA 57.238 25.926 12.76 0.00 32.88 1.40
106 108 9.195411 TCAACATTTTCTGAATGCTTGATTAAC 57.805 29.630 0.00 0.00 30.46 2.01
107 109 8.980610 CAACATTTTCTGAATGCTTGATTAACA 58.019 29.630 0.00 0.00 0.00 2.41
108 110 9.715121 AACATTTTCTGAATGCTTGATTAACAT 57.285 25.926 0.00 0.00 0.00 2.71
109 111 9.715121 ACATTTTCTGAATGCTTGATTAACATT 57.285 25.926 0.00 0.00 36.74 2.71
114 116 9.761504 TTCTGAATGCTTGATTAACATTTTTCA 57.238 25.926 0.00 0.00 34.28 2.69
115 117 9.761504 TCTGAATGCTTGATTAACATTTTTCAA 57.238 25.926 0.00 0.00 34.28 2.69
121 123 9.995003 TGCTTGATTAACATTTTTCAAATACCT 57.005 25.926 0.00 0.00 0.00 3.08
141 143 8.947055 ATACCTATTCAACATTTTCCAAATGC 57.053 30.769 8.77 0.00 0.00 3.56
142 144 7.008021 ACCTATTCAACATTTTCCAAATGCT 57.992 32.000 8.77 0.00 0.00 3.79
143 145 7.452562 ACCTATTCAACATTTTCCAAATGCTT 58.547 30.769 8.77 1.68 0.00 3.91
144 146 8.592809 ACCTATTCAACATTTTCCAAATGCTTA 58.407 29.630 8.77 0.00 0.00 3.09
145 147 9.434420 CCTATTCAACATTTTCCAAATGCTTAA 57.566 29.630 8.77 2.43 0.00 1.85
183 185 7.922505 TCAAATACCTGTTCAACATTTTTCG 57.077 32.000 0.00 0.00 0.00 3.46
184 186 7.708051 TCAAATACCTGTTCAACATTTTTCGA 58.292 30.769 0.00 0.00 0.00 3.71
185 187 8.191446 TCAAATACCTGTTCAACATTTTTCGAA 58.809 29.630 0.00 0.00 0.00 3.71
186 188 8.977505 CAAATACCTGTTCAACATTTTTCGAAT 58.022 29.630 0.00 0.00 0.00 3.34
187 189 8.519492 AATACCTGTTCAACATTTTTCGAATG 57.481 30.769 0.00 0.00 0.00 2.67
188 190 4.744631 ACCTGTTCAACATTTTTCGAATGC 59.255 37.500 0.00 0.00 0.00 3.56
189 191 4.984161 CCTGTTCAACATTTTTCGAATGCT 59.016 37.500 0.00 0.00 0.00 3.79
190 192 5.463061 CCTGTTCAACATTTTTCGAATGCTT 59.537 36.000 0.00 0.00 0.00 3.91
191 193 6.271396 TGTTCAACATTTTTCGAATGCTTG 57.729 33.333 0.00 3.03 0.00 4.01
192 194 5.809562 TGTTCAACATTTTTCGAATGCTTGT 59.190 32.000 0.00 0.00 0.00 3.16
193 195 6.312426 TGTTCAACATTTTTCGAATGCTTGTT 59.688 30.769 0.00 4.70 0.00 2.83
194 196 6.509317 TCAACATTTTTCGAATGCTTGTTC 57.491 33.333 0.00 0.00 0.00 3.18
195 197 6.038985 TCAACATTTTTCGAATGCTTGTTCA 58.961 32.000 0.00 0.00 0.00 3.18
196 198 6.533012 TCAACATTTTTCGAATGCTTGTTCAA 59.467 30.769 0.00 0.00 0.00 2.69
197 199 6.272698 ACATTTTTCGAATGCTTGTTCAAC 57.727 33.333 0.00 0.00 0.00 3.18
198 200 5.809562 ACATTTTTCGAATGCTTGTTCAACA 59.190 32.000 0.00 0.00 0.00 3.33
199 201 6.479660 ACATTTTTCGAATGCTTGTTCAACAT 59.520 30.769 0.00 0.00 0.00 2.71
200 202 6.900568 TTTTTCGAATGCTTGTTCAACATT 57.099 29.167 0.00 10.56 36.74 2.71
201 203 6.900568 TTTTCGAATGCTTGTTCAACATTT 57.099 29.167 0.00 0.00 34.28 2.32
202 204 6.900568 TTTCGAATGCTTGTTCAACATTTT 57.099 29.167 0.00 0.00 34.28 1.82
203 205 6.509317 TTCGAATGCTTGTTCAACATTTTC 57.491 33.333 0.00 0.00 34.28 2.29
204 206 5.586339 TCGAATGCTTGTTCAACATTTTCA 58.414 33.333 0.00 0.00 34.28 2.69
205 207 6.038985 TCGAATGCTTGTTCAACATTTTCAA 58.961 32.000 0.00 0.00 34.28 2.69
206 208 6.533012 TCGAATGCTTGTTCAACATTTTCAAA 59.467 30.769 0.00 0.00 34.28 2.69
207 209 7.224362 TCGAATGCTTGTTCAACATTTTCAAAT 59.776 29.630 0.00 0.00 34.28 2.32
208 210 8.486383 CGAATGCTTGTTCAACATTTTCAAATA 58.514 29.630 0.00 0.00 34.28 1.40
209 211 9.584839 GAATGCTTGTTCAACATTTTCAAATAC 57.415 29.630 0.00 0.00 34.28 1.89
210 212 7.475771 TGCTTGTTCAACATTTTCAAATACC 57.524 32.000 0.00 0.00 0.00 2.73
211 213 7.271511 TGCTTGTTCAACATTTTCAAATACCT 58.728 30.769 0.00 0.00 0.00 3.08
212 214 8.417106 TGCTTGTTCAACATTTTCAAATACCTA 58.583 29.630 0.00 0.00 0.00 3.08
213 215 9.423061 GCTTGTTCAACATTTTCAAATACCTAT 57.577 29.630 0.00 0.00 0.00 2.57
233 235 8.641498 ACCTATTCAACATTTTCTGAATGACT 57.359 30.769 5.82 0.00 41.30 3.41
234 236 9.739276 ACCTATTCAACATTTTCTGAATGACTA 57.261 29.630 5.82 0.00 41.30 2.59
295 297 9.796120 AAAAATACTTGTTGAACATCTTTCGAA 57.204 25.926 0.00 0.00 0.00 3.71
296 298 9.965824 AAAATACTTGTTGAACATCTTTCGAAT 57.034 25.926 0.00 0.00 0.00 3.34
297 299 8.955061 AATACTTGTTGAACATCTTTCGAATG 57.045 30.769 0.00 0.78 0.00 2.67
298 300 6.377327 ACTTGTTGAACATCTTTCGAATGT 57.623 33.333 10.48 4.13 0.00 2.71
299 301 6.795399 ACTTGTTGAACATCTTTCGAATGTT 58.205 32.000 13.88 13.88 40.75 2.71
300 302 7.257722 ACTTGTTGAACATCTTTCGAATGTTT 58.742 30.769 14.86 6.18 38.48 2.83
301 303 7.220683 ACTTGTTGAACATCTTTCGAATGTTTG 59.779 33.333 14.86 13.27 38.48 2.93
302 304 6.559810 TGTTGAACATCTTTCGAATGTTTGT 58.440 32.000 14.86 13.77 38.48 2.83
303 305 7.032580 TGTTGAACATCTTTCGAATGTTTGTT 58.967 30.769 22.36 22.36 38.48 2.83
304 306 7.219917 TGTTGAACATCTTTCGAATGTTTGTTC 59.780 33.333 29.45 29.45 38.48 3.18
305 307 6.790282 TGAACATCTTTCGAATGTTTGTTCA 58.210 32.000 31.77 31.77 40.13 3.18
306 308 7.254137 TGAACATCTTTCGAATGTTTGTTCAA 58.746 30.769 32.41 24.61 39.68 2.69
307 309 7.219917 TGAACATCTTTCGAATGTTTGTTCAAC 59.780 33.333 32.41 21.61 39.68 3.18
336 338 9.719279 TTTTTGAATGCTTGTTCATCATTTTTC 57.281 25.926 1.63 0.00 37.88 2.29
337 339 8.434733 TTTGAATGCTTGTTCATCATTTTTCA 57.565 26.923 1.63 0.00 37.88 2.69
338 340 8.434733 TTGAATGCTTGTTCATCATTTTTCAA 57.565 26.923 0.00 0.00 37.88 2.69
339 341 8.434733 TGAATGCTTGTTCATCATTTTTCAAA 57.565 26.923 0.00 0.00 33.41 2.69
340 342 9.058174 TGAATGCTTGTTCATCATTTTTCAAAT 57.942 25.926 0.00 0.00 33.41 2.32
343 345 9.715121 ATGCTTGTTCATCATTTTTCAAATACT 57.285 25.926 0.00 0.00 0.00 2.12
344 346 9.545105 TGCTTGTTCATCATTTTTCAAATACTT 57.455 25.926 0.00 0.00 0.00 2.24
345 347 9.801714 GCTTGTTCATCATTTTTCAAATACTTG 57.198 29.630 0.00 0.00 0.00 3.16
349 351 9.993881 GTTCATCATTTTTCAAATACTTGTTCG 57.006 29.630 0.00 0.00 33.94 3.95
350 352 9.958234 TTCATCATTTTTCAAATACTTGTTCGA 57.042 25.926 0.00 0.00 33.94 3.71
351 353 9.393249 TCATCATTTTTCAAATACTTGTTCGAC 57.607 29.630 0.00 0.00 33.94 4.20
352 354 9.179552 CATCATTTTTCAAATACTTGTTCGACA 57.820 29.630 0.00 0.00 33.94 4.35
353 355 9.912634 ATCATTTTTCAAATACTTGTTCGACAT 57.087 25.926 0.00 0.00 33.94 3.06
354 356 9.743057 TCATTTTTCAAATACTTGTTCGACATT 57.257 25.926 0.00 0.00 33.94 2.71
475 477 3.621419 CCAAAGGGGCAGATCCAAT 57.379 52.632 0.00 0.00 36.21 3.16
476 478 1.870064 CCAAAGGGGCAGATCCAATT 58.130 50.000 0.00 0.00 36.21 2.32
477 479 3.030873 CCAAAGGGGCAGATCCAATTA 57.969 47.619 0.00 0.00 36.21 1.40
478 480 3.373830 CCAAAGGGGCAGATCCAATTAA 58.626 45.455 0.00 0.00 36.21 1.40
479 481 3.969312 CCAAAGGGGCAGATCCAATTAAT 59.031 43.478 0.00 0.00 36.21 1.40
480 482 4.039609 CCAAAGGGGCAGATCCAATTAATC 59.960 45.833 0.00 0.00 36.21 1.75
481 483 4.821532 AAGGGGCAGATCCAATTAATCT 57.178 40.909 0.00 0.00 36.21 2.40
482 484 4.379302 AGGGGCAGATCCAATTAATCTC 57.621 45.455 0.62 0.00 36.21 2.75
483 485 3.077359 GGGGCAGATCCAATTAATCTCG 58.923 50.000 0.62 0.00 36.21 4.04
484 486 3.077359 GGGCAGATCCAATTAATCTCGG 58.923 50.000 0.62 0.00 36.21 4.63
485 487 3.496870 GGGCAGATCCAATTAATCTCGGT 60.497 47.826 0.62 0.00 36.21 4.69
486 488 3.748568 GGCAGATCCAATTAATCTCGGTC 59.251 47.826 0.62 0.00 31.05 4.79
487 489 4.380531 GCAGATCCAATTAATCTCGGTCA 58.619 43.478 0.62 0.00 31.05 4.02
488 490 4.999950 GCAGATCCAATTAATCTCGGTCAT 59.000 41.667 0.62 0.00 31.05 3.06
489 491 5.121454 GCAGATCCAATTAATCTCGGTCATC 59.879 44.000 0.62 0.00 31.05 2.92
490 492 6.226052 CAGATCCAATTAATCTCGGTCATCA 58.774 40.000 0.62 0.00 31.05 3.07
491 493 6.707608 CAGATCCAATTAATCTCGGTCATCAA 59.292 38.462 0.62 0.00 31.05 2.57
492 494 7.227314 CAGATCCAATTAATCTCGGTCATCAAA 59.773 37.037 0.62 0.00 31.05 2.69
493 495 7.941238 AGATCCAATTAATCTCGGTCATCAAAT 59.059 33.333 0.00 0.00 0.00 2.32
494 496 7.496529 TCCAATTAATCTCGGTCATCAAATC 57.503 36.000 0.00 0.00 0.00 2.17
495 497 7.053498 TCCAATTAATCTCGGTCATCAAATCA 58.947 34.615 0.00 0.00 0.00 2.57
496 498 7.720957 TCCAATTAATCTCGGTCATCAAATCAT 59.279 33.333 0.00 0.00 0.00 2.45
497 499 7.806487 CCAATTAATCTCGGTCATCAAATCATG 59.194 37.037 0.00 0.00 0.00 3.07
498 500 8.347771 CAATTAATCTCGGTCATCAAATCATGT 58.652 33.333 0.00 0.00 0.00 3.21
499 501 5.998454 AATCTCGGTCATCAAATCATGTC 57.002 39.130 0.00 0.00 0.00 3.06
500 502 4.470334 TCTCGGTCATCAAATCATGTCA 57.530 40.909 0.00 0.00 0.00 3.58
501 503 4.831107 TCTCGGTCATCAAATCATGTCAA 58.169 39.130 0.00 0.00 0.00 3.18
502 504 5.430886 TCTCGGTCATCAAATCATGTCAAT 58.569 37.500 0.00 0.00 0.00 2.57
503 505 5.525012 TCTCGGTCATCAAATCATGTCAATC 59.475 40.000 0.00 0.00 0.00 2.67
504 506 4.576053 TCGGTCATCAAATCATGTCAATCC 59.424 41.667 0.00 0.00 0.00 3.01
505 507 4.336153 CGGTCATCAAATCATGTCAATCCA 59.664 41.667 0.00 0.00 0.00 3.41
506 508 5.163632 CGGTCATCAAATCATGTCAATCCAA 60.164 40.000 0.00 0.00 0.00 3.53
507 509 6.038356 GGTCATCAAATCATGTCAATCCAAC 58.962 40.000 0.00 0.00 0.00 3.77
508 510 5.740569 GTCATCAAATCATGTCAATCCAACG 59.259 40.000 0.00 0.00 0.00 4.10
509 511 5.647225 TCATCAAATCATGTCAATCCAACGA 59.353 36.000 0.00 0.00 0.00 3.85
510 512 5.295431 TCAAATCATGTCAATCCAACGAC 57.705 39.130 0.00 0.00 0.00 4.34
511 513 5.003160 TCAAATCATGTCAATCCAACGACT 58.997 37.500 0.00 0.00 33.18 4.18
512 514 5.473162 TCAAATCATGTCAATCCAACGACTT 59.527 36.000 0.00 0.00 33.18 3.01
513 515 6.652900 TCAAATCATGTCAATCCAACGACTTA 59.347 34.615 0.00 0.00 33.18 2.24
514 516 6.668541 AATCATGTCAATCCAACGACTTAG 57.331 37.500 0.00 0.00 33.18 2.18
515 517 5.400066 TCATGTCAATCCAACGACTTAGA 57.600 39.130 0.00 0.00 33.18 2.10
516 518 5.168569 TCATGTCAATCCAACGACTTAGAC 58.831 41.667 0.00 0.00 33.18 2.59
517 519 4.866508 TGTCAATCCAACGACTTAGACT 57.133 40.909 0.00 0.00 33.18 3.24
518 520 4.556233 TGTCAATCCAACGACTTAGACTG 58.444 43.478 0.00 0.00 33.18 3.51
519 521 3.927142 GTCAATCCAACGACTTAGACTGG 59.073 47.826 0.00 0.00 0.00 4.00
520 522 3.576982 TCAATCCAACGACTTAGACTGGT 59.423 43.478 0.00 0.00 0.00 4.00
521 523 4.039973 TCAATCCAACGACTTAGACTGGTT 59.960 41.667 0.00 0.00 0.00 3.67
522 524 3.655276 TCCAACGACTTAGACTGGTTC 57.345 47.619 0.00 0.00 0.00 3.62
523 525 2.960384 TCCAACGACTTAGACTGGTTCA 59.040 45.455 0.00 0.00 0.00 3.18
524 526 3.385433 TCCAACGACTTAGACTGGTTCAA 59.615 43.478 0.00 0.00 0.00 2.69
525 527 4.039973 TCCAACGACTTAGACTGGTTCAAT 59.960 41.667 0.00 0.00 0.00 2.57
526 528 4.152402 CCAACGACTTAGACTGGTTCAATG 59.848 45.833 0.00 0.00 0.00 2.82
527 529 4.602340 ACGACTTAGACTGGTTCAATGT 57.398 40.909 0.00 0.00 0.00 2.71
528 530 4.557205 ACGACTTAGACTGGTTCAATGTC 58.443 43.478 0.00 0.00 0.00 3.06
529 531 3.608506 CGACTTAGACTGGTTCAATGTCG 59.391 47.826 0.00 0.00 36.57 4.35
530 532 4.615223 CGACTTAGACTGGTTCAATGTCGA 60.615 45.833 0.00 0.00 40.98 4.20
531 533 4.810790 ACTTAGACTGGTTCAATGTCGAG 58.189 43.478 0.00 0.00 36.01 4.04
532 534 2.086054 AGACTGGTTCAATGTCGAGC 57.914 50.000 0.00 0.00 36.01 5.03
533 535 0.716108 GACTGGTTCAATGTCGAGCG 59.284 55.000 0.00 0.00 0.00 5.03
534 536 1.291877 ACTGGTTCAATGTCGAGCGC 61.292 55.000 0.00 0.00 0.00 5.92
535 537 1.005037 TGGTTCAATGTCGAGCGCT 60.005 52.632 11.27 11.27 0.00 5.92
536 538 1.014044 TGGTTCAATGTCGAGCGCTC 61.014 55.000 27.64 27.64 0.00 5.03
537 539 1.014044 GGTTCAATGTCGAGCGCTCA 61.014 55.000 34.69 18.66 0.00 4.26
538 540 0.790207 GTTCAATGTCGAGCGCTCAA 59.210 50.000 34.69 17.41 0.00 3.02
539 541 0.790207 TTCAATGTCGAGCGCTCAAC 59.210 50.000 34.69 28.50 0.00 3.18
540 542 0.319469 TCAATGTCGAGCGCTCAACA 60.319 50.000 31.47 31.47 0.00 3.33
541 543 0.179240 CAATGTCGAGCGCTCAACAC 60.179 55.000 31.93 24.81 0.00 3.32
542 544 1.617755 AATGTCGAGCGCTCAACACG 61.618 55.000 31.93 20.44 0.00 4.49
543 545 2.729862 GTCGAGCGCTCAACACGT 60.730 61.111 34.69 0.00 0.00 4.49
544 546 2.027024 TCGAGCGCTCAACACGTT 59.973 55.556 34.69 0.00 0.00 3.99
545 547 1.590525 TCGAGCGCTCAACACGTTT 60.591 52.632 34.69 0.00 0.00 3.60
546 548 0.318022 TCGAGCGCTCAACACGTTTA 60.318 50.000 34.69 4.78 0.00 2.01
547 549 0.091344 CGAGCGCTCAACACGTTTAG 59.909 55.000 34.69 12.34 0.00 1.85
548 550 1.137513 GAGCGCTCAACACGTTTAGT 58.862 50.000 31.91 0.00 0.00 2.24
562 564 6.654519 CACGTTTAGTGTGCAGTTAATTTC 57.345 37.500 0.00 0.00 45.51 2.17
563 565 6.195868 CACGTTTAGTGTGCAGTTAATTTCA 58.804 36.000 0.00 0.00 45.51 2.69
564 566 6.855914 CACGTTTAGTGTGCAGTTAATTTCAT 59.144 34.615 0.00 0.00 45.51 2.57
565 567 6.855914 ACGTTTAGTGTGCAGTTAATTTCATG 59.144 34.615 0.00 0.00 0.00 3.07
566 568 6.183359 CGTTTAGTGTGCAGTTAATTTCATGC 60.183 38.462 0.00 2.49 39.14 4.06
567 569 4.178545 AGTGTGCAGTTAATTTCATGCC 57.821 40.909 0.00 0.50 37.89 4.40
568 570 3.573538 AGTGTGCAGTTAATTTCATGCCA 59.426 39.130 0.00 2.50 37.89 4.92
569 571 4.039004 AGTGTGCAGTTAATTTCATGCCAA 59.961 37.500 0.00 0.00 37.89 4.52
570 572 4.749099 GTGTGCAGTTAATTTCATGCCAAA 59.251 37.500 0.00 0.00 37.89 3.28
571 573 5.409214 GTGTGCAGTTAATTTCATGCCAAAT 59.591 36.000 0.00 0.00 37.89 2.32
572 574 6.589523 GTGTGCAGTTAATTTCATGCCAAATA 59.410 34.615 0.00 0.00 37.89 1.40
573 575 7.278424 GTGTGCAGTTAATTTCATGCCAAATAT 59.722 33.333 0.00 0.00 37.89 1.28
574 576 8.473219 TGTGCAGTTAATTTCATGCCAAATATA 58.527 29.630 0.00 0.00 37.89 0.86
575 577 9.480053 GTGCAGTTAATTTCATGCCAAATATAT 57.520 29.630 0.00 0.00 37.89 0.86
600 602 9.847706 ATTGTTAATCACATAATAACACGCAAA 57.152 25.926 0.00 0.00 38.77 3.68
601 603 9.847706 TTGTTAATCACATAATAACACGCAAAT 57.152 25.926 0.00 0.00 38.77 2.32
628 630 6.727824 ATCCTACTTAATATTCGCATGCAC 57.272 37.500 19.57 0.00 0.00 4.57
629 631 5.853936 TCCTACTTAATATTCGCATGCACT 58.146 37.500 19.57 3.59 0.00 4.40
630 632 6.288294 TCCTACTTAATATTCGCATGCACTT 58.712 36.000 19.57 3.39 0.00 3.16
631 633 7.438564 TCCTACTTAATATTCGCATGCACTTA 58.561 34.615 19.57 5.72 0.00 2.24
632 634 7.929245 TCCTACTTAATATTCGCATGCACTTAA 59.071 33.333 19.57 11.55 0.00 1.85
633 635 8.721478 CCTACTTAATATTCGCATGCACTTAAT 58.279 33.333 19.57 13.11 0.00 1.40
641 643 6.539649 TTCGCATGCACTTAATATACTTCC 57.460 37.500 19.57 0.00 0.00 3.46
642 644 4.994852 TCGCATGCACTTAATATACTTCCC 59.005 41.667 19.57 0.00 0.00 3.97
643 645 4.754618 CGCATGCACTTAATATACTTCCCA 59.245 41.667 19.57 0.00 0.00 4.37
644 646 5.238432 CGCATGCACTTAATATACTTCCCAA 59.762 40.000 19.57 0.00 0.00 4.12
645 647 6.072508 CGCATGCACTTAATATACTTCCCAAT 60.073 38.462 19.57 0.00 0.00 3.16
646 648 7.522073 CGCATGCACTTAATATACTTCCCAATT 60.522 37.037 19.57 0.00 0.00 2.32
647 649 8.792633 GCATGCACTTAATATACTTCCCAATTA 58.207 33.333 14.21 0.00 0.00 1.40
650 652 8.832521 TGCACTTAATATACTTCCCAATTAACG 58.167 33.333 0.00 0.00 0.00 3.18
651 653 8.833493 GCACTTAATATACTTCCCAATTAACGT 58.167 33.333 0.00 0.00 0.00 3.99
653 655 8.833493 ACTTAATATACTTCCCAATTAACGTGC 58.167 33.333 0.00 0.00 0.00 5.34
654 656 8.734218 TTAATATACTTCCCAATTAACGTGCA 57.266 30.769 0.00 0.00 0.00 4.57
655 657 7.817418 AATATACTTCCCAATTAACGTGCAT 57.183 32.000 0.00 0.00 0.00 3.96
656 658 7.817418 ATATACTTCCCAATTAACGTGCATT 57.183 32.000 0.00 0.00 0.00 3.56
657 659 4.173036 ACTTCCCAATTAACGTGCATTG 57.827 40.909 11.40 11.40 0.00 2.82
658 660 2.645730 TCCCAATTAACGTGCATTGC 57.354 45.000 12.49 0.46 0.00 3.56
659 661 1.889170 TCCCAATTAACGTGCATTGCA 59.111 42.857 7.38 7.38 35.60 4.08
675 677 7.193377 TGCATTGCACATATACATTGACTAG 57.807 36.000 7.38 0.00 31.71 2.57
676 678 6.767423 TGCATTGCACATATACATTGACTAGT 59.233 34.615 7.38 0.00 31.71 2.57
677 679 7.930865 TGCATTGCACATATACATTGACTAGTA 59.069 33.333 7.38 0.00 31.71 1.82
678 680 8.773645 GCATTGCACATATACATTGACTAGTAA 58.226 33.333 3.15 0.00 0.00 2.24
746 748 2.223537 AAAAAGCAGAAAACAGGCCG 57.776 45.000 0.00 0.00 0.00 6.13
747 749 1.111277 AAAAGCAGAAAACAGGCCGT 58.889 45.000 0.00 0.00 0.00 5.68
748 750 0.385390 AAAGCAGAAAACAGGCCGTG 59.615 50.000 0.00 0.00 0.00 4.94
749 751 1.455383 AAGCAGAAAACAGGCCGTGG 61.455 55.000 0.00 0.00 0.00 4.94
750 752 2.644992 CAGAAAACAGGCCGTGGC 59.355 61.111 1.16 1.16 41.06 5.01
779 781 2.889617 GGCCGGCCCATTTTACAC 59.110 61.111 36.64 5.01 0.00 2.90
780 782 1.680989 GGCCGGCCCATTTTACACT 60.681 57.895 36.64 0.00 0.00 3.55
781 783 1.663379 GGCCGGCCCATTTTACACTC 61.663 60.000 36.64 4.14 0.00 3.51
782 784 1.988834 GCCGGCCCATTTTACACTCG 61.989 60.000 18.11 0.00 0.00 4.18
783 785 1.427819 CGGCCCATTTTACACTCGC 59.572 57.895 0.00 0.00 0.00 5.03
784 786 1.024579 CGGCCCATTTTACACTCGCT 61.025 55.000 0.00 0.00 0.00 4.93
785 787 0.451783 GGCCCATTTTACACTCGCTG 59.548 55.000 0.00 0.00 0.00 5.18
786 788 1.448985 GCCCATTTTACACTCGCTGA 58.551 50.000 0.00 0.00 0.00 4.26
787 789 1.810151 GCCCATTTTACACTCGCTGAA 59.190 47.619 0.00 0.00 0.00 3.02
788 790 2.159517 GCCCATTTTACACTCGCTGAAG 60.160 50.000 0.00 0.00 0.00 3.02
789 791 2.420022 CCCATTTTACACTCGCTGAAGG 59.580 50.000 0.00 0.00 0.00 3.46
826 829 4.643387 GCAAGGCGAGGGTGTGGT 62.643 66.667 0.00 0.00 0.00 4.16
827 830 2.669569 CAAGGCGAGGGTGTGGTG 60.670 66.667 0.00 0.00 0.00 4.17
900 920 0.947244 ACCAACAGCTTTCGCTTCTG 59.053 50.000 0.00 0.00 46.47 3.02
1008 1078 2.125552 CGGCGACAGATGGAGCAA 60.126 61.111 0.00 0.00 0.00 3.91
1086 1156 3.998672 GACAAGGACGGCCGTGGA 61.999 66.667 39.65 0.00 46.42 4.02
1515 1845 0.639756 CCCGAATTTGCGCGAATTTG 59.360 50.000 31.45 31.45 32.51 2.32
1516 1846 0.639756 CCGAATTTGCGCGAATTTGG 59.360 50.000 37.87 37.87 41.68 3.28
1519 1849 2.222267 CGAATTTGCGCGAATTTGGTTC 60.222 45.455 31.02 20.90 30.18 3.62
1521 1851 1.764851 TTTGCGCGAATTTGGTTCTG 58.235 45.000 12.10 0.00 34.56 3.02
1522 1852 0.665835 TTGCGCGAATTTGGTTCTGT 59.334 45.000 12.10 0.00 34.56 3.41
1524 1854 1.327507 GCGCGAATTTGGTTCTGTTC 58.672 50.000 12.10 0.00 34.56 3.18
1526 1856 2.604614 GCGCGAATTTGGTTCTGTTCTT 60.605 45.455 12.10 0.00 34.56 2.52
1527 1857 2.973224 CGCGAATTTGGTTCTGTTCTTG 59.027 45.455 0.00 0.00 34.56 3.02
1528 1858 3.308530 GCGAATTTGGTTCTGTTCTTGG 58.691 45.455 0.00 0.00 34.56 3.61
1529 1859 3.308530 CGAATTTGGTTCTGTTCTTGGC 58.691 45.455 0.00 0.00 34.56 4.52
1530 1860 3.243367 CGAATTTGGTTCTGTTCTTGGCA 60.243 43.478 0.00 0.00 34.56 4.92
1531 1861 4.559300 CGAATTTGGTTCTGTTCTTGGCAT 60.559 41.667 0.00 0.00 34.56 4.40
1532 1862 4.525912 ATTTGGTTCTGTTCTTGGCATC 57.474 40.909 0.00 0.00 0.00 3.91
1533 1863 1.909700 TGGTTCTGTTCTTGGCATCC 58.090 50.000 0.00 0.00 0.00 3.51
1534 1864 0.804989 GGTTCTGTTCTTGGCATCCG 59.195 55.000 0.00 0.00 0.00 4.18
1535 1865 1.610624 GGTTCTGTTCTTGGCATCCGA 60.611 52.381 0.00 0.00 0.00 4.55
1536 1866 2.151202 GTTCTGTTCTTGGCATCCGAA 58.849 47.619 0.00 0.00 0.00 4.30
1537 1867 1.808411 TCTGTTCTTGGCATCCGAAC 58.192 50.000 14.24 14.24 37.97 3.95
1538 1868 0.804989 CTGTTCTTGGCATCCGAACC 59.195 55.000 16.85 5.48 36.97 3.62
1539 1869 0.608035 TGTTCTTGGCATCCGAACCC 60.608 55.000 16.85 1.17 36.97 4.11
1540 1870 0.608035 GTTCTTGGCATCCGAACCCA 60.608 55.000 11.50 0.00 32.88 4.51
1541 1871 0.111446 TTCTTGGCATCCGAACCCAA 59.889 50.000 0.00 3.82 37.13 4.12
1542 1872 0.608035 TCTTGGCATCCGAACCCAAC 60.608 55.000 0.00 0.00 35.02 3.77
1543 1873 1.595093 CTTGGCATCCGAACCCAACC 61.595 60.000 0.00 0.00 35.02 3.77
1544 1874 3.131478 GGCATCCGAACCCAACCG 61.131 66.667 0.00 0.00 0.00 4.44
1545 1875 3.810896 GCATCCGAACCCAACCGC 61.811 66.667 0.00 0.00 0.00 5.68
1546 1876 2.359354 CATCCGAACCCAACCGCA 60.359 61.111 0.00 0.00 0.00 5.69
1606 2012 5.412526 AATTTGCGTTTCTTGACGTCTTA 57.587 34.783 17.92 3.92 44.50 2.10
1620 2026 2.186076 CGTCTTACATCTCTGTTCGCC 58.814 52.381 0.00 0.00 36.79 5.54
1767 2201 1.980052 CCTTCTGGGCTACGTTGGA 59.020 57.895 0.00 0.00 0.00 3.53
1968 3303 5.480073 GGCCTACTCATCTGTCATCTCTATT 59.520 44.000 0.00 0.00 0.00 1.73
2027 3362 9.255304 GTTTTGTTTTAATGGAGTGCTATTCAA 57.745 29.630 0.00 0.00 0.00 2.69
2127 3649 3.487544 GGAGTTTGTCTGAACTGTTGTGC 60.488 47.826 0.00 0.00 39.84 4.57
2128 3650 3.347216 AGTTTGTCTGAACTGTTGTGCT 58.653 40.909 0.00 0.00 38.39 4.40
2592 4690 2.211806 CTTGTTTTGCATGTTGGTGGG 58.788 47.619 0.00 0.00 0.00 4.61
2609 4707 4.289934 TGGTGGGTACTATTTTGTGGATGA 59.710 41.667 0.00 0.00 0.00 2.92
2752 5331 9.252962 GGAGAAAATCATTACATAAGGCAAATG 57.747 33.333 0.00 0.00 0.00 2.32
2862 5908 3.744426 GCCGCTAGTAGAAACTTTGACAA 59.256 43.478 0.00 0.00 37.15 3.18
2914 5964 6.945435 TGGTTGTATTACCTTTGACATGATGT 59.055 34.615 0.00 0.00 39.04 3.06
2993 6051 2.231478 TCGGTGCAGAGTAGAAAAGGAG 59.769 50.000 0.00 0.00 0.00 3.69
3041 6172 2.271800 GGACACGATGACATGAGAACC 58.728 52.381 0.00 0.00 0.00 3.62
3211 6445 1.735571 ACATTGGTTCGTAATGGTCGC 59.264 47.619 0.00 0.00 39.30 5.19
3212 6446 2.006888 CATTGGTTCGTAATGGTCGCT 58.993 47.619 0.00 0.00 33.08 4.93
3244 6479 2.125350 GCTACTTCAGCGCTGCCT 60.125 61.111 32.44 18.12 41.37 4.75
3259 6500 3.575399 GCCTGGTGCACTTCTTTTG 57.425 52.632 17.98 0.04 40.77 2.44
3316 6572 3.202906 ACTTTAGCTGTGCGTTTTCAGA 58.797 40.909 0.00 0.00 34.02 3.27
3319 6575 2.977405 AGCTGTGCGTTTTCAGATTC 57.023 45.000 0.00 0.00 34.02 2.52
3343 6625 5.785599 CGAATTTTGACGAGTTCTGAACATC 59.214 40.000 21.50 15.40 0.00 3.06
3387 6731 7.814107 AGGCTAACATGTGAACAAAATTGTATG 59.186 33.333 0.00 2.72 41.31 2.39
3438 6907 0.473326 GTCTCTCGCTACCCTCCCTA 59.527 60.000 0.00 0.00 0.00 3.53
3451 6957 3.051341 ACCCTCCCTATAATCTGGACACA 60.051 47.826 0.00 0.00 0.00 3.72
3452 6958 3.580458 CCCTCCCTATAATCTGGACACAG 59.420 52.174 0.00 0.00 46.30 3.66
3453 6959 3.007398 CCTCCCTATAATCTGGACACAGC 59.993 52.174 0.00 0.00 44.54 4.40
3454 6960 3.643320 CTCCCTATAATCTGGACACAGCA 59.357 47.826 0.00 0.00 44.54 4.41
3455 6961 4.037222 TCCCTATAATCTGGACACAGCAA 58.963 43.478 0.00 0.00 44.54 3.91
3457 6963 5.843969 TCCCTATAATCTGGACACAGCAATA 59.156 40.000 0.00 0.00 44.54 1.90
3458 6964 6.014242 TCCCTATAATCTGGACACAGCAATAG 60.014 42.308 0.00 0.00 44.54 1.73
3459 6965 6.169094 CCTATAATCTGGACACAGCAATAGG 58.831 44.000 11.71 11.71 44.54 2.57
3460 6966 5.894298 ATAATCTGGACACAGCAATAGGA 57.106 39.130 0.00 0.00 44.54 2.94
3461 6967 4.785346 AATCTGGACACAGCAATAGGAT 57.215 40.909 0.00 0.00 44.54 3.24
3462 6968 5.894298 AATCTGGACACAGCAATAGGATA 57.106 39.130 0.00 0.00 44.54 2.59
3479 6985 3.051803 AGGATAGGATTCTCAGGTGGACA 60.052 47.826 0.00 0.00 0.00 4.02
3574 7116 1.075601 TCCAGCCCTCCTTTCAATGT 58.924 50.000 0.00 0.00 0.00 2.71
3607 7150 9.383519 CTTCTTTTGCTTATTCAGTACCTCATA 57.616 33.333 0.00 0.00 0.00 2.15
3619 7162 5.299531 TCAGTACCTCATATTCGAGTCCAAG 59.700 44.000 0.00 0.00 0.00 3.61
3732 7601 9.679661 TGAATACACAAATACATAACATCCAGT 57.320 29.630 0.00 0.00 0.00 4.00
3735 7604 7.994425 ACACAAATACATAACATCCAGTGAA 57.006 32.000 0.00 0.00 0.00 3.18
3762 7633 4.451900 GAAATGAGAATATCACCACCCGT 58.548 43.478 0.00 0.00 41.91 5.28
3840 7713 4.082571 ACAGCGCAAAGAAAGCATCTAATT 60.083 37.500 11.47 0.00 37.42 1.40
3876 7749 5.760253 CACCATAAGGCTATGTCGAAAGAAT 59.240 40.000 0.00 0.00 39.81 2.40
3881 7754 3.452627 AGGCTATGTCGAAAGAATGGACT 59.547 43.478 0.00 0.00 45.01 3.85
3925 7798 5.554822 GGAACGACAAAGGCAACATATAA 57.445 39.130 0.00 0.00 41.41 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 55 9.773328 ACGTGTATAGAAAAATTGTTGATCATG 57.227 29.630 0.00 0.00 0.00 3.07
75 77 4.977963 AGCATTCAGAAAATGTTGAACGTG 59.022 37.500 0.00 0.00 36.26 4.49
76 78 5.186996 AGCATTCAGAAAATGTTGAACGT 57.813 34.783 0.00 0.00 36.26 3.99
77 79 5.686841 TCAAGCATTCAGAAAATGTTGAACG 59.313 36.000 10.51 0.00 36.26 3.95
78 80 7.647907 ATCAAGCATTCAGAAAATGTTGAAC 57.352 32.000 14.05 0.00 36.26 3.18
79 81 9.761504 TTAATCAAGCATTCAGAAAATGTTGAA 57.238 25.926 14.05 0.00 37.68 2.69
80 82 9.195411 GTTAATCAAGCATTCAGAAAATGTTGA 57.805 29.630 13.17 13.17 34.96 3.18
81 83 8.980610 TGTTAATCAAGCATTCAGAAAATGTTG 58.019 29.630 0.00 4.14 0.00 3.33
82 84 9.715121 ATGTTAATCAAGCATTCAGAAAATGTT 57.285 25.926 0.00 0.00 0.00 2.71
83 85 9.715121 AATGTTAATCAAGCATTCAGAAAATGT 57.285 25.926 0.00 0.00 0.00 2.71
88 90 9.761504 TGAAAAATGTTAATCAAGCATTCAGAA 57.238 25.926 0.00 0.00 32.38 3.02
89 91 9.761504 TTGAAAAATGTTAATCAAGCATTCAGA 57.238 25.926 0.00 0.00 32.38 3.27
95 97 9.995003 AGGTATTTGAAAAATGTTAATCAAGCA 57.005 25.926 0.00 0.00 33.71 3.91
115 117 9.382275 GCATTTGGAAAATGTTGAATAGGTATT 57.618 29.630 12.82 0.00 0.00 1.89
116 118 8.761689 AGCATTTGGAAAATGTTGAATAGGTAT 58.238 29.630 12.82 0.00 0.00 2.73
117 119 8.133024 AGCATTTGGAAAATGTTGAATAGGTA 57.867 30.769 12.82 0.00 0.00 3.08
118 120 7.008021 AGCATTTGGAAAATGTTGAATAGGT 57.992 32.000 12.82 0.00 0.00 3.08
119 121 7.910441 AAGCATTTGGAAAATGTTGAATAGG 57.090 32.000 12.82 0.00 0.00 2.57
157 159 8.812329 CGAAAAATGTTGAACAGGTATTTGAAA 58.188 29.630 3.74 0.00 0.00 2.69
158 160 8.191446 TCGAAAAATGTTGAACAGGTATTTGAA 58.809 29.630 3.74 0.00 0.00 2.69
159 161 7.708051 TCGAAAAATGTTGAACAGGTATTTGA 58.292 30.769 3.74 3.47 0.00 2.69
160 162 7.922505 TCGAAAAATGTTGAACAGGTATTTG 57.077 32.000 3.74 1.25 0.00 2.32
161 163 8.977505 CATTCGAAAAATGTTGAACAGGTATTT 58.022 29.630 0.00 2.53 0.00 1.40
162 164 7.116233 GCATTCGAAAAATGTTGAACAGGTATT 59.884 33.333 0.00 0.00 0.00 1.89
163 165 6.586082 GCATTCGAAAAATGTTGAACAGGTAT 59.414 34.615 0.00 0.00 0.00 2.73
164 166 5.918011 GCATTCGAAAAATGTTGAACAGGTA 59.082 36.000 0.00 0.00 0.00 3.08
165 167 4.744631 GCATTCGAAAAATGTTGAACAGGT 59.255 37.500 0.00 0.00 0.00 4.00
166 168 4.984161 AGCATTCGAAAAATGTTGAACAGG 59.016 37.500 0.00 0.00 0.00 4.00
167 169 6.019640 ACAAGCATTCGAAAAATGTTGAACAG 60.020 34.615 0.00 0.00 0.00 3.16
168 170 5.809562 ACAAGCATTCGAAAAATGTTGAACA 59.190 32.000 0.00 0.00 0.00 3.18
169 171 6.272698 ACAAGCATTCGAAAAATGTTGAAC 57.727 33.333 0.00 0.00 0.00 3.18
170 172 6.533012 TGAACAAGCATTCGAAAAATGTTGAA 59.467 30.769 19.77 10.01 30.37 2.69
171 173 6.038985 TGAACAAGCATTCGAAAAATGTTGA 58.961 32.000 19.77 12.71 30.37 3.18
172 174 6.271396 TGAACAAGCATTCGAAAAATGTTG 57.729 33.333 19.77 13.66 30.37 3.33
173 175 6.312426 TGTTGAACAAGCATTCGAAAAATGTT 59.688 30.769 16.68 16.68 32.68 2.71
174 176 5.809562 TGTTGAACAAGCATTCGAAAAATGT 59.190 32.000 0.00 2.66 0.00 2.71
175 177 6.271396 TGTTGAACAAGCATTCGAAAAATG 57.729 33.333 0.00 0.00 0.00 2.32
176 178 7.481275 AATGTTGAACAAGCATTCGAAAAAT 57.519 28.000 0.62 0.00 0.00 1.82
177 179 6.900568 AATGTTGAACAAGCATTCGAAAAA 57.099 29.167 0.62 0.00 0.00 1.94
178 180 6.900568 AAATGTTGAACAAGCATTCGAAAA 57.099 29.167 0.62 0.00 32.38 2.29
179 181 6.533012 TGAAAATGTTGAACAAGCATTCGAAA 59.467 30.769 0.62 0.00 32.38 3.46
180 182 6.038985 TGAAAATGTTGAACAAGCATTCGAA 58.961 32.000 0.62 0.00 32.38 3.71
181 183 5.586339 TGAAAATGTTGAACAAGCATTCGA 58.414 33.333 0.62 0.00 32.38 3.71
182 184 5.886715 TGAAAATGTTGAACAAGCATTCG 57.113 34.783 0.62 0.00 32.38 3.34
183 185 9.584839 GTATTTGAAAATGTTGAACAAGCATTC 57.415 29.630 0.62 5.59 32.38 2.67
184 186 8.558700 GGTATTTGAAAATGTTGAACAAGCATT 58.441 29.630 0.62 0.00 34.69 3.56
185 187 7.933033 AGGTATTTGAAAATGTTGAACAAGCAT 59.067 29.630 0.62 0.00 0.00 3.79
186 188 7.271511 AGGTATTTGAAAATGTTGAACAAGCA 58.728 30.769 0.62 0.00 0.00 3.91
187 189 7.713764 AGGTATTTGAAAATGTTGAACAAGC 57.286 32.000 0.62 0.00 0.00 4.01
207 209 9.739276 AGTCATTCAGAAAATGTTGAATAGGTA 57.261 29.630 0.00 0.00 40.93 3.08
208 210 8.641498 AGTCATTCAGAAAATGTTGAATAGGT 57.359 30.769 0.00 0.00 40.93 3.08
269 271 9.796120 TTCGAAAGATGTTCAACAAGTATTTTT 57.204 25.926 0.00 0.00 41.60 1.94
270 272 9.965824 ATTCGAAAGATGTTCAACAAGTATTTT 57.034 25.926 0.00 0.00 41.60 1.82
271 273 9.398170 CATTCGAAAGATGTTCAACAAGTATTT 57.602 29.630 0.00 0.00 41.60 1.40
272 274 8.567948 ACATTCGAAAGATGTTCAACAAGTATT 58.432 29.630 7.49 0.00 41.60 1.89
273 275 8.099364 ACATTCGAAAGATGTTCAACAAGTAT 57.901 30.769 7.49 0.00 41.60 2.12
274 276 7.490962 ACATTCGAAAGATGTTCAACAAGTA 57.509 32.000 7.49 0.00 41.60 2.24
275 277 6.377327 ACATTCGAAAGATGTTCAACAAGT 57.623 33.333 7.49 0.00 41.60 3.16
276 278 7.220683 ACAAACATTCGAAAGATGTTCAACAAG 59.779 33.333 14.22 5.58 39.31 3.16
277 279 7.032580 ACAAACATTCGAAAGATGTTCAACAA 58.967 30.769 14.22 0.00 39.31 2.83
278 280 6.559810 ACAAACATTCGAAAGATGTTCAACA 58.440 32.000 14.22 0.00 39.31 3.33
279 281 7.449934 AACAAACATTCGAAAGATGTTCAAC 57.550 32.000 14.22 0.00 39.31 3.18
280 282 7.678194 GAACAAACATTCGAAAGATGTTCAA 57.322 32.000 29.41 1.51 46.46 2.69
282 284 7.219917 TGTTGAACAAACATTCGAAAGATGTTC 59.780 33.333 28.62 28.62 46.96 3.18
283 285 7.032580 TGTTGAACAAACATTCGAAAGATGTT 58.967 30.769 20.53 20.53 43.96 2.71
284 286 6.559810 TGTTGAACAAACATTCGAAAGATGT 58.440 32.000 7.49 8.76 43.96 3.06
310 312 9.719279 GAAAAATGATGAACAAGCATTCAAAAA 57.281 25.926 2.66 0.00 41.78 1.94
311 313 8.890718 TGAAAAATGATGAACAAGCATTCAAAA 58.109 25.926 2.66 0.00 41.78 2.44
312 314 8.434733 TGAAAAATGATGAACAAGCATTCAAA 57.565 26.923 2.66 0.00 41.78 2.69
313 315 8.434733 TTGAAAAATGATGAACAAGCATTCAA 57.565 26.923 2.66 0.00 41.78 2.69
314 316 8.434733 TTTGAAAAATGATGAACAAGCATTCA 57.565 26.923 1.17 1.17 42.62 2.57
317 319 9.715121 AGTATTTGAAAAATGATGAACAAGCAT 57.285 25.926 0.00 0.00 0.00 3.79
318 320 9.545105 AAGTATTTGAAAAATGATGAACAAGCA 57.455 25.926 0.00 0.00 0.00 3.91
319 321 9.801714 CAAGTATTTGAAAAATGATGAACAAGC 57.198 29.630 0.00 0.00 36.36 4.01
323 325 9.993881 CGAACAAGTATTTGAAAAATGATGAAC 57.006 29.630 4.81 0.00 37.73 3.18
324 326 9.958234 TCGAACAAGTATTTGAAAAATGATGAA 57.042 25.926 4.81 0.00 37.73 2.57
325 327 9.393249 GTCGAACAAGTATTTGAAAAATGATGA 57.607 29.630 4.81 0.00 37.73 2.92
326 328 9.179552 TGTCGAACAAGTATTTGAAAAATGATG 57.820 29.630 4.81 0.00 37.73 3.07
327 329 9.912634 ATGTCGAACAAGTATTTGAAAAATGAT 57.087 25.926 4.81 0.00 37.73 2.45
328 330 9.743057 AATGTCGAACAAGTATTTGAAAAATGA 57.257 25.926 4.81 0.00 37.73 2.57
438 440 9.649316 CCCTTTGGGTCTTTTTATATTGGTATA 57.351 33.333 0.00 0.00 38.25 1.47
439 441 8.547481 CCCTTTGGGTCTTTTTATATTGGTAT 57.453 34.615 0.00 0.00 38.25 2.73
440 442 7.964666 CCCTTTGGGTCTTTTTATATTGGTA 57.035 36.000 0.00 0.00 38.25 3.25
441 443 6.867519 CCCTTTGGGTCTTTTTATATTGGT 57.132 37.500 0.00 0.00 38.25 3.67
457 459 1.870064 AATTGGATCTGCCCCTTTGG 58.130 50.000 0.00 0.00 34.97 3.28
458 460 4.897670 AGATTAATTGGATCTGCCCCTTTG 59.102 41.667 5.62 0.00 32.79 2.77
459 461 5.143369 GAGATTAATTGGATCTGCCCCTTT 58.857 41.667 9.96 0.00 34.13 3.11
460 462 4.734266 GAGATTAATTGGATCTGCCCCTT 58.266 43.478 9.96 0.00 34.13 3.95
461 463 3.244700 CGAGATTAATTGGATCTGCCCCT 60.245 47.826 9.96 0.00 34.13 4.79
462 464 3.077359 CGAGATTAATTGGATCTGCCCC 58.923 50.000 9.96 0.00 34.13 5.80
463 465 3.077359 CCGAGATTAATTGGATCTGCCC 58.923 50.000 9.96 0.00 34.13 5.36
464 466 3.744660 ACCGAGATTAATTGGATCTGCC 58.255 45.455 9.96 0.00 34.13 4.85
465 467 4.380531 TGACCGAGATTAATTGGATCTGC 58.619 43.478 9.96 3.47 34.13 4.26
466 468 6.226052 TGATGACCGAGATTAATTGGATCTG 58.774 40.000 9.96 1.90 34.13 2.90
467 469 6.425210 TGATGACCGAGATTAATTGGATCT 57.575 37.500 8.74 6.01 36.60 2.75
468 470 7.496529 TTTGATGACCGAGATTAATTGGATC 57.503 36.000 8.74 0.00 0.00 3.36
469 471 7.720957 TGATTTGATGACCGAGATTAATTGGAT 59.279 33.333 8.74 0.00 0.00 3.41
470 472 7.053498 TGATTTGATGACCGAGATTAATTGGA 58.947 34.615 8.74 0.00 0.00 3.53
471 473 7.263100 TGATTTGATGACCGAGATTAATTGG 57.737 36.000 0.00 0.00 0.00 3.16
472 474 8.347771 ACATGATTTGATGACCGAGATTAATTG 58.652 33.333 0.00 0.00 0.00 2.32
473 475 8.455903 ACATGATTTGATGACCGAGATTAATT 57.544 30.769 0.00 0.00 0.00 1.40
474 476 7.716560 TGACATGATTTGATGACCGAGATTAAT 59.283 33.333 0.00 0.00 0.00 1.40
475 477 7.047271 TGACATGATTTGATGACCGAGATTAA 58.953 34.615 0.00 0.00 0.00 1.40
476 478 6.581712 TGACATGATTTGATGACCGAGATTA 58.418 36.000 0.00 0.00 0.00 1.75
477 479 5.430886 TGACATGATTTGATGACCGAGATT 58.569 37.500 0.00 0.00 0.00 2.40
478 480 5.027293 TGACATGATTTGATGACCGAGAT 57.973 39.130 0.00 0.00 0.00 2.75
479 481 4.470334 TGACATGATTTGATGACCGAGA 57.530 40.909 0.00 0.00 0.00 4.04
480 482 5.277683 GGATTGACATGATTTGATGACCGAG 60.278 44.000 0.00 0.00 0.00 4.63
481 483 4.576053 GGATTGACATGATTTGATGACCGA 59.424 41.667 0.00 0.00 0.00 4.69
482 484 4.336153 TGGATTGACATGATTTGATGACCG 59.664 41.667 0.00 0.00 0.00 4.79
483 485 5.840243 TGGATTGACATGATTTGATGACC 57.160 39.130 0.00 0.00 0.00 4.02
484 486 5.740569 CGTTGGATTGACATGATTTGATGAC 59.259 40.000 0.00 0.00 0.00 3.06
485 487 5.647225 TCGTTGGATTGACATGATTTGATGA 59.353 36.000 0.00 0.00 0.00 2.92
486 488 5.740569 GTCGTTGGATTGACATGATTTGATG 59.259 40.000 0.00 0.00 35.20 3.07
487 489 5.649395 AGTCGTTGGATTGACATGATTTGAT 59.351 36.000 0.00 0.00 37.58 2.57
488 490 5.003160 AGTCGTTGGATTGACATGATTTGA 58.997 37.500 0.00 0.00 37.58 2.69
489 491 5.300969 AGTCGTTGGATTGACATGATTTG 57.699 39.130 0.00 0.00 37.58 2.32
490 492 5.964958 AAGTCGTTGGATTGACATGATTT 57.035 34.783 0.00 0.00 37.58 2.17
491 493 6.313905 GTCTAAGTCGTTGGATTGACATGATT 59.686 38.462 0.00 0.00 37.58 2.57
492 494 5.812642 GTCTAAGTCGTTGGATTGACATGAT 59.187 40.000 0.00 0.00 37.58 2.45
493 495 5.047306 AGTCTAAGTCGTTGGATTGACATGA 60.047 40.000 0.00 0.00 37.58 3.07
494 496 5.062683 CAGTCTAAGTCGTTGGATTGACATG 59.937 44.000 0.00 0.00 34.08 3.21
495 497 5.171476 CAGTCTAAGTCGTTGGATTGACAT 58.829 41.667 0.00 0.00 34.08 3.06
496 498 4.556233 CAGTCTAAGTCGTTGGATTGACA 58.444 43.478 0.00 0.00 34.08 3.58
497 499 3.927142 CCAGTCTAAGTCGTTGGATTGAC 59.073 47.826 0.00 0.00 34.08 3.18
498 500 3.576982 ACCAGTCTAAGTCGTTGGATTGA 59.423 43.478 0.00 0.00 34.08 2.57
499 501 3.926616 ACCAGTCTAAGTCGTTGGATTG 58.073 45.455 0.00 0.00 32.59 2.67
500 502 4.039973 TGAACCAGTCTAAGTCGTTGGATT 59.960 41.667 0.00 0.00 33.19 3.01
501 503 3.576982 TGAACCAGTCTAAGTCGTTGGAT 59.423 43.478 0.00 0.00 33.19 3.41
502 504 2.960384 TGAACCAGTCTAAGTCGTTGGA 59.040 45.455 0.00 0.00 33.19 3.53
503 505 3.380479 TGAACCAGTCTAAGTCGTTGG 57.620 47.619 0.00 0.00 35.07 3.77
504 506 4.750098 ACATTGAACCAGTCTAAGTCGTTG 59.250 41.667 0.00 0.00 0.00 4.10
505 507 4.957296 ACATTGAACCAGTCTAAGTCGTT 58.043 39.130 0.00 0.00 0.00 3.85
506 508 4.557205 GACATTGAACCAGTCTAAGTCGT 58.443 43.478 0.00 0.00 0.00 4.34
507 509 3.608506 CGACATTGAACCAGTCTAAGTCG 59.391 47.826 0.00 0.00 37.63 4.18
508 510 4.806330 TCGACATTGAACCAGTCTAAGTC 58.194 43.478 0.00 0.00 0.00 3.01
509 511 4.810790 CTCGACATTGAACCAGTCTAAGT 58.189 43.478 0.00 0.00 0.00 2.24
510 512 3.614616 GCTCGACATTGAACCAGTCTAAG 59.385 47.826 0.00 0.00 0.00 2.18
511 513 3.585862 GCTCGACATTGAACCAGTCTAA 58.414 45.455 0.00 0.00 0.00 2.10
512 514 2.415491 CGCTCGACATTGAACCAGTCTA 60.415 50.000 0.00 0.00 0.00 2.59
513 515 1.670087 CGCTCGACATTGAACCAGTCT 60.670 52.381 0.00 0.00 0.00 3.24
514 516 0.716108 CGCTCGACATTGAACCAGTC 59.284 55.000 0.00 0.00 0.00 3.51
515 517 1.291877 GCGCTCGACATTGAACCAGT 61.292 55.000 0.00 0.00 0.00 4.00
516 518 1.016130 AGCGCTCGACATTGAACCAG 61.016 55.000 2.64 0.00 0.00 4.00
517 519 1.005037 AGCGCTCGACATTGAACCA 60.005 52.632 2.64 0.00 0.00 3.67
518 520 1.014044 TGAGCGCTCGACATTGAACC 61.014 55.000 30.75 5.13 0.00 3.62
519 521 0.790207 TTGAGCGCTCGACATTGAAC 59.210 50.000 30.75 5.68 0.00 3.18
520 522 0.790207 GTTGAGCGCTCGACATTGAA 59.210 50.000 40.41 22.88 42.27 2.69
521 523 0.319469 TGTTGAGCGCTCGACATTGA 60.319 50.000 42.95 27.81 46.09 2.57
522 524 2.153039 TGTTGAGCGCTCGACATTG 58.847 52.632 42.95 0.00 46.09 2.82
523 525 4.673403 TGTTGAGCGCTCGACATT 57.327 50.000 42.95 9.77 46.09 2.71
526 528 1.818221 AAACGTGTTGAGCGCTCGAC 61.818 55.000 39.44 39.44 42.86 4.20
527 529 0.318022 TAAACGTGTTGAGCGCTCGA 60.318 50.000 30.75 27.40 0.00 4.04
528 530 0.091344 CTAAACGTGTTGAGCGCTCG 59.909 55.000 30.75 21.89 0.00 5.03
529 531 1.136611 CACTAAACGTGTTGAGCGCTC 60.137 52.381 30.42 30.42 38.84 5.03
530 532 0.859232 CACTAAACGTGTTGAGCGCT 59.141 50.000 11.27 11.27 38.84 5.92
531 533 3.345087 CACTAAACGTGTTGAGCGC 57.655 52.632 0.00 0.00 38.84 5.92
540 542 6.366315 TGAAATTAACTGCACACTAAACGT 57.634 33.333 0.00 0.00 0.00 3.99
541 543 6.183359 GCATGAAATTAACTGCACACTAAACG 60.183 38.462 0.00 0.00 34.77 3.60
542 544 6.089417 GGCATGAAATTAACTGCACACTAAAC 59.911 38.462 0.00 0.00 36.34 2.01
543 545 6.155827 GGCATGAAATTAACTGCACACTAAA 58.844 36.000 0.00 0.00 36.34 1.85
544 546 5.242615 TGGCATGAAATTAACTGCACACTAA 59.757 36.000 0.00 0.00 36.34 2.24
545 547 4.764308 TGGCATGAAATTAACTGCACACTA 59.236 37.500 0.00 0.00 36.34 2.74
546 548 3.573538 TGGCATGAAATTAACTGCACACT 59.426 39.130 0.00 0.00 36.34 3.55
547 549 3.911868 TGGCATGAAATTAACTGCACAC 58.088 40.909 0.00 0.00 36.34 3.82
548 550 4.597404 TTGGCATGAAATTAACTGCACA 57.403 36.364 0.00 0.00 36.34 4.57
549 551 7.775397 ATATTTGGCATGAAATTAACTGCAC 57.225 32.000 0.00 0.53 36.34 4.57
574 576 9.847706 TTTGCGTGTTATTATGTGATTAACAAT 57.152 25.926 0.00 0.00 43.61 2.71
575 577 9.847706 ATTTGCGTGTTATTATGTGATTAACAA 57.152 25.926 0.00 0.00 43.61 2.83
602 604 8.883731 GTGCATGCGAATATTAAGTAGGATATT 58.116 33.333 14.09 0.00 32.61 1.28
603 605 8.260818 AGTGCATGCGAATATTAAGTAGGATAT 58.739 33.333 14.09 0.00 0.00 1.63
604 606 7.611770 AGTGCATGCGAATATTAAGTAGGATA 58.388 34.615 14.09 0.00 0.00 2.59
605 607 6.467677 AGTGCATGCGAATATTAAGTAGGAT 58.532 36.000 14.09 0.00 0.00 3.24
606 608 5.853936 AGTGCATGCGAATATTAAGTAGGA 58.146 37.500 14.09 0.00 0.00 2.94
607 609 6.545504 AAGTGCATGCGAATATTAAGTAGG 57.454 37.500 14.09 0.00 0.00 3.18
615 617 8.883731 GGAAGTATATTAAGTGCATGCGAATAT 58.116 33.333 20.97 20.97 0.00 1.28
616 618 7.333423 GGGAAGTATATTAAGTGCATGCGAATA 59.667 37.037 14.09 13.59 0.00 1.75
617 619 6.149474 GGGAAGTATATTAAGTGCATGCGAAT 59.851 38.462 14.09 11.90 0.00 3.34
618 620 5.468746 GGGAAGTATATTAAGTGCATGCGAA 59.531 40.000 14.09 4.92 0.00 4.70
619 621 4.994852 GGGAAGTATATTAAGTGCATGCGA 59.005 41.667 14.09 0.00 0.00 5.10
620 622 4.754618 TGGGAAGTATATTAAGTGCATGCG 59.245 41.667 14.09 0.00 0.00 4.73
621 623 6.633500 TTGGGAAGTATATTAAGTGCATGC 57.367 37.500 11.82 11.82 0.00 4.06
624 626 8.832521 CGTTAATTGGGAAGTATATTAAGTGCA 58.167 33.333 0.00 0.00 0.00 4.57
625 627 8.833493 ACGTTAATTGGGAAGTATATTAAGTGC 58.167 33.333 0.00 0.00 0.00 4.40
627 629 8.833493 GCACGTTAATTGGGAAGTATATTAAGT 58.167 33.333 0.00 0.00 0.00 2.24
628 630 8.832521 TGCACGTTAATTGGGAAGTATATTAAG 58.167 33.333 0.00 0.00 0.00 1.85
629 631 8.734218 TGCACGTTAATTGGGAAGTATATTAA 57.266 30.769 0.00 0.00 0.00 1.40
630 632 8.911918 ATGCACGTTAATTGGGAAGTATATTA 57.088 30.769 0.00 0.00 0.00 0.98
631 633 7.817418 ATGCACGTTAATTGGGAAGTATATT 57.183 32.000 0.00 0.00 0.00 1.28
632 634 7.648142 CAATGCACGTTAATTGGGAAGTATAT 58.352 34.615 10.74 0.00 31.46 0.86
633 635 6.459024 GCAATGCACGTTAATTGGGAAGTATA 60.459 38.462 17.38 0.00 34.90 1.47
634 636 5.678616 GCAATGCACGTTAATTGGGAAGTAT 60.679 40.000 17.38 0.00 34.90 2.12
635 637 4.380023 GCAATGCACGTTAATTGGGAAGTA 60.380 41.667 17.38 0.00 34.90 2.24
636 638 3.613910 GCAATGCACGTTAATTGGGAAGT 60.614 43.478 17.38 0.00 34.90 3.01
637 639 2.923020 GCAATGCACGTTAATTGGGAAG 59.077 45.455 17.38 0.00 34.90 3.46
638 640 2.297315 TGCAATGCACGTTAATTGGGAA 59.703 40.909 2.72 0.00 34.90 3.97
639 641 1.889170 TGCAATGCACGTTAATTGGGA 59.111 42.857 2.72 0.00 34.90 4.37
640 642 2.360553 TGCAATGCACGTTAATTGGG 57.639 45.000 2.72 0.00 34.90 4.12
651 653 6.767423 ACTAGTCAATGTATATGTGCAATGCA 59.233 34.615 2.72 2.72 35.60 3.96
652 654 7.194607 ACTAGTCAATGTATATGTGCAATGC 57.805 36.000 0.00 0.00 0.00 3.56
727 729 1.480545 ACGGCCTGTTTTCTGCTTTTT 59.519 42.857 0.00 0.00 0.00 1.94
728 730 1.111277 ACGGCCTGTTTTCTGCTTTT 58.889 45.000 0.00 0.00 0.00 2.27
729 731 0.385390 CACGGCCTGTTTTCTGCTTT 59.615 50.000 0.00 0.00 0.00 3.51
730 732 1.455383 CCACGGCCTGTTTTCTGCTT 61.455 55.000 0.00 0.00 0.00 3.91
731 733 1.898574 CCACGGCCTGTTTTCTGCT 60.899 57.895 0.00 0.00 0.00 4.24
732 734 2.644992 CCACGGCCTGTTTTCTGC 59.355 61.111 0.00 0.00 0.00 4.26
733 735 2.644992 GCCACGGCCTGTTTTCTG 59.355 61.111 0.00 0.00 34.56 3.02
762 764 1.663379 GAGTGTAAAATGGGCCGGCC 61.663 60.000 38.57 38.57 0.00 6.13
763 765 1.807226 GAGTGTAAAATGGGCCGGC 59.193 57.895 21.18 21.18 0.00 6.13
764 766 1.988834 GCGAGTGTAAAATGGGCCGG 61.989 60.000 0.00 0.00 0.00 6.13
765 767 1.024579 AGCGAGTGTAAAATGGGCCG 61.025 55.000 0.00 0.00 0.00 6.13
766 768 0.451783 CAGCGAGTGTAAAATGGGCC 59.548 55.000 0.00 0.00 0.00 5.80
767 769 1.448985 TCAGCGAGTGTAAAATGGGC 58.551 50.000 0.00 0.00 0.00 5.36
768 770 2.420022 CCTTCAGCGAGTGTAAAATGGG 59.580 50.000 0.00 0.00 0.00 4.00
769 771 2.159517 GCCTTCAGCGAGTGTAAAATGG 60.160 50.000 0.00 0.00 0.00 3.16
770 772 3.122937 GCCTTCAGCGAGTGTAAAATG 57.877 47.619 0.00 0.00 0.00 2.32
812 814 3.941188 CACACCACACCCTCGCCT 61.941 66.667 0.00 0.00 0.00 5.52
821 824 0.182537 CAAGGAAGGTCCACACCACA 59.817 55.000 0.00 0.00 46.68 4.17
825 828 4.652822 AGTATTTCAAGGAAGGTCCACAC 58.347 43.478 0.00 0.00 39.61 3.82
826 829 4.263331 GGAGTATTTCAAGGAAGGTCCACA 60.263 45.833 0.00 0.00 39.61 4.17
827 830 4.262617 GGAGTATTTCAAGGAAGGTCCAC 58.737 47.826 0.00 0.00 39.61 4.02
1008 1078 2.933287 TGGTGGCCGTCCTGGAAT 60.933 61.111 16.12 0.00 42.00 3.01
1131 1201 2.047061 TCTTCTTGGTACAGGTGCACT 58.953 47.619 17.98 0.00 42.39 4.40
1274 1347 3.965026 CTGACGGCCTCCTCCTCCA 62.965 68.421 0.00 0.00 0.00 3.86
1376 1464 2.221299 CCGTTGTTCCAGGGGAGGA 61.221 63.158 0.00 0.00 35.41 3.71
1515 1845 0.804989 CGGATGCCAAGAACAGAACC 59.195 55.000 0.00 0.00 0.00 3.62
1516 1846 1.808411 TCGGATGCCAAGAACAGAAC 58.192 50.000 0.00 0.00 0.00 3.01
1519 1849 0.804989 GGTTCGGATGCCAAGAACAG 59.195 55.000 11.34 0.00 44.20 3.16
1521 1851 0.608035 TGGGTTCGGATGCCAAGAAC 60.608 55.000 3.45 3.45 42.36 3.01
1522 1852 0.111446 TTGGGTTCGGATGCCAAGAA 59.889 50.000 0.00 0.00 0.00 2.52
1524 1854 1.595093 GGTTGGGTTCGGATGCCAAG 61.595 60.000 0.00 0.00 0.00 3.61
1526 1856 2.034999 GGTTGGGTTCGGATGCCA 59.965 61.111 2.32 0.00 0.00 4.92
1527 1857 3.131478 CGGTTGGGTTCGGATGCC 61.131 66.667 0.00 0.00 0.00 4.40
1528 1858 3.810896 GCGGTTGGGTTCGGATGC 61.811 66.667 0.00 0.00 0.00 3.91
1529 1859 2.359354 TGCGGTTGGGTTCGGATG 60.359 61.111 0.00 0.00 0.00 3.51
1530 1860 2.046314 CTGCGGTTGGGTTCGGAT 60.046 61.111 0.00 0.00 0.00 4.18
1531 1861 4.323477 CCTGCGGTTGGGTTCGGA 62.323 66.667 0.00 0.00 0.00 4.55
1533 1863 4.323477 TCCCTGCGGTTGGGTTCG 62.323 66.667 7.20 0.00 44.84 3.95
1534 1864 2.359975 CTCCCTGCGGTTGGGTTC 60.360 66.667 7.20 0.00 44.84 3.62
1535 1865 4.660938 GCTCCCTGCGGTTGGGTT 62.661 66.667 7.20 0.00 44.84 4.11
1537 1867 3.944250 ATTGCTCCCTGCGGTTGGG 62.944 63.158 0.00 0.00 46.63 4.12
1538 1868 1.937546 GAATTGCTCCCTGCGGTTGG 61.938 60.000 0.00 0.00 46.63 3.77
1539 1869 1.243342 TGAATTGCTCCCTGCGGTTG 61.243 55.000 0.00 0.00 46.63 3.77
1540 1870 0.323725 ATGAATTGCTCCCTGCGGTT 60.324 50.000 0.00 0.00 46.63 4.44
1541 1871 1.033746 CATGAATTGCTCCCTGCGGT 61.034 55.000 0.00 0.00 46.63 5.68
1542 1872 1.731433 CCATGAATTGCTCCCTGCGG 61.731 60.000 0.00 0.00 46.63 5.69
1543 1873 1.033746 ACCATGAATTGCTCCCTGCG 61.034 55.000 0.00 0.00 46.63 5.18
1544 1874 1.135721 GAACCATGAATTGCTCCCTGC 59.864 52.381 0.00 0.00 43.25 4.85
1545 1875 2.426024 CAGAACCATGAATTGCTCCCTG 59.574 50.000 0.00 0.00 0.00 4.45
1546 1876 2.042162 ACAGAACCATGAATTGCTCCCT 59.958 45.455 0.00 0.00 0.00 4.20
1606 2012 1.670087 CGAAGTGGCGAACAGAGATGT 60.670 52.381 0.00 0.00 0.00 3.06
1620 2026 1.330306 CAAAGCGGAAATGCGAAGTG 58.670 50.000 0.00 0.00 40.67 3.16
1641 2056 0.033504 TTGAGTCTCGTTGTCAGGGC 59.966 55.000 0.00 0.00 0.00 5.19
1760 2188 0.396811 CTCCCCTTGAACTCCAACGT 59.603 55.000 0.00 0.00 0.00 3.99
1767 2201 1.059913 CACAGACCTCCCCTTGAACT 58.940 55.000 0.00 0.00 0.00 3.01
1863 2721 3.784719 GGGTAGGCCGCCCGTTAA 61.785 66.667 20.28 0.00 36.30 2.01
2526 4224 9.730420 GTTTCTTGCTGTTTACTCATCTTAAAA 57.270 29.630 0.00 0.00 0.00 1.52
2527 4225 8.898761 TGTTTCTTGCTGTTTACTCATCTTAAA 58.101 29.630 0.00 0.00 0.00 1.52
2528 4226 8.342634 GTGTTTCTTGCTGTTTACTCATCTTAA 58.657 33.333 0.00 0.00 0.00 1.85
2529 4227 7.497579 TGTGTTTCTTGCTGTTTACTCATCTTA 59.502 33.333 0.00 0.00 0.00 2.10
2530 4228 6.318648 TGTGTTTCTTGCTGTTTACTCATCTT 59.681 34.615 0.00 0.00 0.00 2.40
2531 4229 5.822519 TGTGTTTCTTGCTGTTTACTCATCT 59.177 36.000 0.00 0.00 0.00 2.90
2532 4230 6.060028 TGTGTTTCTTGCTGTTTACTCATC 57.940 37.500 0.00 0.00 0.00 2.92
2533 4231 6.639632 ATGTGTTTCTTGCTGTTTACTCAT 57.360 33.333 0.00 0.00 0.00 2.90
2609 4707 0.250295 ACTTACAGCACACGCATGGT 60.250 50.000 0.00 0.00 42.27 3.55
2616 4714 7.386848 TCCATTTAACTTCTACTTACAGCACAC 59.613 37.037 0.00 0.00 0.00 3.82
2752 5331 7.724305 TTCTGTATCAAGGTTTAGTGTGAAC 57.276 36.000 0.00 0.00 0.00 3.18
2826 5412 3.992427 ACTAGCGGCAAGTAGTACAAAAC 59.008 43.478 1.45 0.00 0.00 2.43
2875 5921 9.836076 GGTAATACAACCACTGAAAAGATTAAC 57.164 33.333 0.00 0.00 39.50 2.01
2914 5964 4.651503 AGAACAGAAAGTGAGGAAGTCAGA 59.348 41.667 0.00 0.00 35.13 3.27
2993 6051 1.513622 GTCGGGAGTCCTGCTCTTC 59.486 63.158 13.73 0.00 43.62 2.87
3141 6272 1.303317 GGCCGGGTGAAACAGTCAT 60.303 57.895 2.18 0.00 39.98 3.06
3144 6275 2.763645 AAGGGCCGGGTGAAACAGT 61.764 57.895 2.18 0.00 39.98 3.55
3209 6443 2.012673 AGCAGCCAGAATAAGAAAGCG 58.987 47.619 0.00 0.00 0.00 4.68
3211 6445 5.877012 TGAAGTAGCAGCCAGAATAAGAAAG 59.123 40.000 0.00 0.00 0.00 2.62
3212 6446 5.804639 TGAAGTAGCAGCCAGAATAAGAAA 58.195 37.500 0.00 0.00 0.00 2.52
3243 6478 1.067516 CACCCAAAAGAAGTGCACCAG 59.932 52.381 14.63 0.00 0.00 4.00
3244 6479 1.110442 CACCCAAAAGAAGTGCACCA 58.890 50.000 14.63 0.00 0.00 4.17
3259 6500 2.200337 GCAAGAACCACCACCACCC 61.200 63.158 0.00 0.00 0.00 4.61
3316 6572 6.018262 TGTTCAGAACTCGTCAAAATTCGAAT 60.018 34.615 14.51 4.39 35.69 3.34
3319 6575 5.078153 TGTTCAGAACTCGTCAAAATTCG 57.922 39.130 14.51 0.00 0.00 3.34
3343 6625 5.659440 AGCCTAAACCAAATGTACAATGG 57.341 39.130 22.80 22.80 40.16 3.16
3387 6731 0.517316 GAGAACAATGGTGTCGTGGC 59.483 55.000 0.00 0.00 36.80 5.01
3438 6907 5.894298 TCCTATTGCTGTGTCCAGATTAT 57.106 39.130 0.00 0.00 41.50 1.28
3451 6957 5.248020 CACCTGAGAATCCTATCCTATTGCT 59.752 44.000 0.00 0.00 0.00 3.91
3452 6958 5.486526 CACCTGAGAATCCTATCCTATTGC 58.513 45.833 0.00 0.00 0.00 3.56
3453 6959 5.782331 TCCACCTGAGAATCCTATCCTATTG 59.218 44.000 0.00 0.00 0.00 1.90
3454 6960 5.782845 GTCCACCTGAGAATCCTATCCTATT 59.217 44.000 0.00 0.00 0.00 1.73
3455 6961 5.162826 TGTCCACCTGAGAATCCTATCCTAT 60.163 44.000 0.00 0.00 0.00 2.57
3457 6963 3.051803 TGTCCACCTGAGAATCCTATCCT 60.052 47.826 0.00 0.00 0.00 3.24
3458 6964 3.070302 GTGTCCACCTGAGAATCCTATCC 59.930 52.174 0.00 0.00 0.00 2.59
3459 6965 4.329462 GTGTCCACCTGAGAATCCTATC 57.671 50.000 0.00 0.00 0.00 2.08
3479 6985 2.224426 TGTTGATTTGTCTAGCCGTGGT 60.224 45.455 0.00 0.00 0.00 4.16
3574 7116 4.343526 TGAATAAGCAAAAGAAGGCAACCA 59.656 37.500 0.00 0.00 37.17 3.67
3607 7150 3.685139 TTTCTCTGCTTGGACTCGAAT 57.315 42.857 0.00 0.00 0.00 3.34
3619 7162 5.863935 GGACCAAATGTGTAATTTTCTCTGC 59.136 40.000 0.00 0.00 0.00 4.26
3732 7601 6.158520 TGGTGATATTCTCATTTCCTCCTTCA 59.841 38.462 0.00 0.00 35.97 3.02
3735 7604 5.163152 GGTGGTGATATTCTCATTTCCTCCT 60.163 44.000 0.00 0.00 35.97 3.69
3840 7713 1.286553 CTTATGGTGGGCCCCAACTAA 59.713 52.381 20.89 13.54 42.67 2.24
3912 7785 4.917385 TGGTGAGTGTTATATGTTGCCTT 58.083 39.130 0.00 0.00 0.00 4.35
3921 7794 5.496556 CCTGGTTTGATGGTGAGTGTTATA 58.503 41.667 0.00 0.00 0.00 0.98
3925 7798 1.819305 GCCTGGTTTGATGGTGAGTGT 60.819 52.381 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.