Multiple sequence alignment - TraesCS7B01G013300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G013300 chr7B 100.000 7393 0 0 1 7393 9760885 9753493 0.000000e+00 13653
1 TraesCS7B01G013300 chr7A 92.630 1886 115 9 2001 3874 71137350 71139223 0.000000e+00 2691
2 TraesCS7B01G013300 chr7A 91.924 1362 80 13 4824 6161 71140413 71141768 0.000000e+00 1879
3 TraesCS7B01G013300 chr7A 90.115 1214 84 21 471 1666 71135695 71136890 0.000000e+00 1544
4 TraesCS7B01G013300 chr7A 86.378 969 72 32 3881 4823 71139354 71140288 0.000000e+00 1003
5 TraesCS7B01G013300 chr7A 82.425 1064 79 45 6195 7171 71141771 71142813 0.000000e+00 830
6 TraesCS7B01G013300 chr7A 82.819 227 17 9 7188 7393 71143128 71143353 4.560000e-42 183
7 TraesCS7B01G013300 chr7D 92.559 1532 69 11 4834 6349 68795503 68794001 0.000000e+00 2156
8 TraesCS7B01G013300 chr7D 86.618 1928 155 45 2937 4823 68797705 68795840 0.000000e+00 2036
9 TraesCS7B01G013300 chr7D 89.205 1686 100 33 1 1666 68800709 68799086 0.000000e+00 2030
10 TraesCS7B01G013300 chr7D 94.659 1011 43 5 1696 2705 68799007 68798007 0.000000e+00 1557
11 TraesCS7B01G013300 chr7D 94.770 631 25 4 1038 1666 95045584 95044960 0.000000e+00 976
12 TraesCS7B01G013300 chr7D 83.106 1101 79 46 6358 7393 68793951 68792893 0.000000e+00 904
13 TraesCS7B01G013300 chr7D 90.106 283 24 2 3052 3334 95044851 95044573 1.520000e-96 364
14 TraesCS7B01G013300 chr4D 93.867 1011 51 4 1696 2705 80282700 80281700 0.000000e+00 1513
15 TraesCS7B01G013300 chr4D 94.453 631 27 4 1038 1666 80283403 80282779 0.000000e+00 965
16 TraesCS7B01G013300 chr4D 93.661 631 30 6 1038 1666 154782158 154781536 0.000000e+00 935
17 TraesCS7B01G013300 chr1D 94.317 915 40 5 1696 2608 416569271 416568367 0.000000e+00 1391
18 TraesCS7B01G013300 chr1D 93.119 683 36 4 1696 2377 186664729 186665401 0.000000e+00 990
19 TraesCS7B01G013300 chr1D 94.295 631 28 4 1038 1666 416569974 416569350 0.000000e+00 959
20 TraesCS7B01G013300 chr1D 93.691 634 32 4 1035 1666 186664023 186664650 0.000000e+00 942
21 TraesCS7B01G013300 chr1D 89.841 502 27 5 4834 5333 416567849 416567370 2.270000e-174 623
22 TraesCS7B01G013300 chr1D 89.807 363 31 4 2973 3334 416568377 416568020 1.880000e-125 460
23 TraesCS7B01G013300 chr5D 94.394 660 35 2 1811 2470 50538949 50539606 0.000000e+00 1013
24 TraesCS7B01G013300 chr5D 93.939 660 38 2 1811 2470 65372238 65371581 0.000000e+00 996
25 TraesCS7B01G013300 chr5D 91.097 483 20 4 4849 5330 50540586 50541046 3.760000e-177 632
26 TraesCS7B01G013300 chr5D 89.841 502 27 8 4834 5333 65370615 65370136 2.270000e-174 623
27 TraesCS7B01G013300 chr5D 89.196 398 38 3 2937 3334 50540014 50540406 6.660000e-135 492
28 TraesCS7B01G013300 chr5D 88.191 398 37 4 2937 3334 65371173 65370786 4.040000e-127 466
29 TraesCS7B01G013300 chr5D 98.295 176 3 0 2530 2705 50539602 50539777 7.200000e-80 309
30 TraesCS7B01G013300 chr5D 97.688 173 4 0 2533 2705 65371582 65371410 1.560000e-76 298
31 TraesCS7B01G013300 chr2D 94.091 660 37 2 1811 2470 553840956 553841613 0.000000e+00 1002
32 TraesCS7B01G013300 chr2D 93.939 660 38 2 1811 2470 193772632 193773289 0.000000e+00 996
33 TraesCS7B01G013300 chr2D 95.106 613 27 2 1038 1648 20042432 20041821 0.000000e+00 963
34 TraesCS7B01G013300 chr2D 93.770 626 31 4 1043 1666 602303699 602303080 0.000000e+00 933
35 TraesCS7B01G013300 chr2D 90.180 499 25 8 4834 5330 193774261 193774737 4.870000e-176 628
36 TraesCS7B01G013300 chr2D 90.180 499 25 5 4834 5330 553842093 553842569 4.870000e-176 628
37 TraesCS7B01G013300 chr2D 89.841 502 27 8 4834 5333 20041466 20040987 2.270000e-174 623
38 TraesCS7B01G013300 chr2D 88.693 398 40 3 2937 3334 193773698 193774090 1.440000e-131 481
39 TraesCS7B01G013300 chr2D 89.420 293 28 1 3042 3334 553841633 553841922 4.210000e-97 366
40 TraesCS7B01G013300 chr2D 98.295 176 3 0 2530 2705 193773285 193773460 7.200000e-80 309
41 TraesCS7B01G013300 chr6D 93.514 663 33 8 1811 2470 337781119 337781774 0.000000e+00 977
42 TraesCS7B01G013300 chr6D 90.180 499 25 5 4834 5330 337782272 337782748 4.870000e-176 628
43 TraesCS7B01G013300 chr6D 98.246 171 3 0 2535 2705 337781787 337781957 4.340000e-77 300
44 TraesCS7B01G013300 chr3D 89.123 285 23 5 3052 3334 88944229 88943951 1.530000e-91 348


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G013300 chr7B 9753493 9760885 7392 True 13653.000000 13653 100.000000 1 7393 1 chr7B.!!$R1 7392
1 TraesCS7B01G013300 chr7A 71135695 71143353 7658 False 1355.000000 2691 87.715167 471 7393 6 chr7A.!!$F1 6922
2 TraesCS7B01G013300 chr7D 68792893 68800709 7816 True 1736.600000 2156 89.229400 1 7393 5 chr7D.!!$R1 7392
3 TraesCS7B01G013300 chr7D 95044573 95045584 1011 True 670.000000 976 92.438000 1038 3334 2 chr7D.!!$R2 2296
4 TraesCS7B01G013300 chr4D 80281700 80283403 1703 True 1239.000000 1513 94.160000 1038 2705 2 chr4D.!!$R2 1667
5 TraesCS7B01G013300 chr4D 154781536 154782158 622 True 935.000000 935 93.661000 1038 1666 1 chr4D.!!$R1 628
6 TraesCS7B01G013300 chr1D 186664023 186665401 1378 False 966.000000 990 93.405000 1035 2377 2 chr1D.!!$F1 1342
7 TraesCS7B01G013300 chr1D 416567370 416569974 2604 True 858.250000 1391 92.065000 1038 5333 4 chr1D.!!$R1 4295
8 TraesCS7B01G013300 chr5D 50538949 50541046 2097 False 611.500000 1013 93.245500 1811 5330 4 chr5D.!!$F1 3519
9 TraesCS7B01G013300 chr5D 65370136 65372238 2102 True 595.750000 996 92.414750 1811 5333 4 chr5D.!!$R1 3522
10 TraesCS7B01G013300 chr2D 602303080 602303699 619 True 933.000000 933 93.770000 1043 1666 1 chr2D.!!$R1 623
11 TraesCS7B01G013300 chr2D 20040987 20042432 1445 True 793.000000 963 92.473500 1038 5333 2 chr2D.!!$R2 4295
12 TraesCS7B01G013300 chr2D 553840956 553842569 1613 False 665.333333 1002 91.230333 1811 5330 3 chr2D.!!$F2 3519
13 TraesCS7B01G013300 chr2D 193772632 193774737 2105 False 603.500000 996 92.776750 1811 5330 4 chr2D.!!$F1 3519
14 TraesCS7B01G013300 chr6D 337781119 337782748 1629 False 635.000000 977 93.980000 1811 5330 3 chr6D.!!$F1 3519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
122 124 0.179084 GAGCAACATACTAGCGCCCA 60.179 55.000 2.29 0.00 0.00 5.36 F
476 487 0.253044 TAGAACAGCAGGGCATGGTC 59.747 55.000 0.00 0.00 37.60 4.02 F
1449 1506 0.109597 CCTGGTTCATGTTCGCTTGC 60.110 55.000 0.00 0.00 0.00 4.01 F
1971 2080 0.250166 ATAGCGATAAACGTGCCCCC 60.250 55.000 0.00 0.00 44.60 5.40 F
2729 3050 0.402504 TACTGCAAAACCCGACCCAT 59.597 50.000 0.00 0.00 0.00 4.00 F
3423 4192 0.687354 TGTCAAGTTCTGCTCCCTCC 59.313 55.000 0.00 0.00 0.00 4.30 F
3432 4201 1.133167 TCTGCTCCCTCCGATCCAATA 60.133 52.381 0.00 0.00 0.00 1.90 F
4414 5359 1.263217 ACACACATTCGAAAAGCGGTC 59.737 47.619 0.00 0.00 41.33 4.79 F
5228 6524 1.310933 GGGTCTCAGCATGCCAACTG 61.311 60.000 15.66 6.16 34.76 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1449 1506 0.028242 ACGCTAGATCTCGAGCAACG 59.972 55.000 15.97 7.94 43.45 4.10 R
1952 2060 0.250166 GGGGGCACGTTTATCGCTAT 60.250 55.000 0.00 0.00 44.19 2.97 R
3120 3446 0.521735 GTTTAGGCCGTTCCAGCAAG 59.478 55.000 0.00 0.00 37.29 4.01 R
3969 4873 0.107456 ACAGATATGGGCGGCAGAAG 59.893 55.000 12.47 0.00 0.00 2.85 R
4522 5480 1.536766 CATGACTGCATCCACGTTTGT 59.463 47.619 0.00 0.00 30.68 2.83 R
5312 6609 1.003545 CACTCAAGTTGTGAAGTGCCG 60.004 52.381 11.73 0.00 37.60 5.69 R
5474 6772 3.703556 TCCCAAGCAGTCAATTTCAAACA 59.296 39.130 0.00 0.00 0.00 2.83 R
6024 7335 0.365523 CGTGGTTGACGTTCATAGCG 59.634 55.000 0.00 0.00 43.50 4.26 R
6759 8175 0.106335 CGAGGATGGCATCTCAGCTT 59.894 55.000 25.48 6.22 34.17 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 0.549950 ATGGATCAGCAACTCCTGGG 59.450 55.000 0.00 0.00 33.64 4.45
110 111 2.236146 ACCCATACAATCTCGAGCAACA 59.764 45.455 7.81 0.00 0.00 3.33
120 122 0.248907 TCGAGCAACATACTAGCGCC 60.249 55.000 2.29 0.00 0.00 6.53
122 124 0.179084 GAGCAACATACTAGCGCCCA 60.179 55.000 2.29 0.00 0.00 5.36
179 181 1.585895 TTTACACATCCATCCCCCGA 58.414 50.000 0.00 0.00 0.00 5.14
225 227 1.221414 GCATAGCATGGGAACTCGAC 58.779 55.000 0.00 0.00 0.00 4.20
229 231 2.186903 CATGGGAACTCGACGGGG 59.813 66.667 0.00 0.00 0.00 5.73
254 256 4.867608 GTCAAACACTCTTATCAGCTCCTC 59.132 45.833 0.00 0.00 0.00 3.71
256 258 5.952347 TCAAACACTCTTATCAGCTCCTCTA 59.048 40.000 0.00 0.00 0.00 2.43
257 259 6.609212 TCAAACACTCTTATCAGCTCCTCTAT 59.391 38.462 0.00 0.00 0.00 1.98
259 261 5.700183 ACACTCTTATCAGCTCCTCTATCA 58.300 41.667 0.00 0.00 0.00 2.15
260 262 6.314120 ACACTCTTATCAGCTCCTCTATCAT 58.686 40.000 0.00 0.00 0.00 2.45
269 271 2.159254 GCTCCTCTATCATCTCCATCGC 60.159 54.545 0.00 0.00 0.00 4.58
272 274 1.133982 CTCTATCATCTCCATCGCCCG 59.866 57.143 0.00 0.00 0.00 6.13
277 279 3.506059 ATCTCCATCGCCCGCTTCG 62.506 63.158 0.00 0.00 0.00 3.79
301 303 6.422100 CGGTTGATATACCATCTCTTTGTGAG 59.578 42.308 0.00 0.00 39.89 3.51
312 314 9.520515 ACCATCTCTTTGTGAGTGTATTTATTT 57.479 29.630 0.00 0.00 43.13 1.40
331 333 3.959535 TTTGATTGTTCCAGATTGCCC 57.040 42.857 0.00 0.00 0.00 5.36
333 335 3.104519 TGATTGTTCCAGATTGCCCAT 57.895 42.857 0.00 0.00 0.00 4.00
339 341 2.549064 TCCAGATTGCCCATATCACG 57.451 50.000 0.00 0.00 0.00 4.35
344 354 3.822735 CAGATTGCCCATATCACGGAAAT 59.177 43.478 0.00 0.00 0.00 2.17
350 360 3.243839 GCCCATATCACGGAAATTGCAAT 60.244 43.478 5.99 5.99 0.00 3.56
357 367 2.166579 GGAAATTGCAATGGCGGCG 61.167 57.895 13.82 0.51 45.35 6.46
358 368 1.153862 GAAATTGCAATGGCGGCGA 60.154 52.632 13.82 0.00 45.35 5.54
360 370 0.743688 AAATTGCAATGGCGGCGATA 59.256 45.000 13.82 0.00 45.35 2.92
366 376 1.404181 GCAATGGCGGCGATATCTCTA 60.404 52.381 12.98 0.00 0.00 2.43
367 377 2.263077 CAATGGCGGCGATATCTCTAC 58.737 52.381 12.98 0.00 0.00 2.59
401 411 1.583556 TCTAGCAGATCTTTGGCCCA 58.416 50.000 0.00 0.00 0.00 5.36
403 413 2.092753 TCTAGCAGATCTTTGGCCCAAG 60.093 50.000 10.37 10.37 0.00 3.61
417 428 3.271250 CCAAGCTAATGGGTGCAGT 57.729 52.632 0.00 0.00 36.79 4.40
432 443 3.211045 GTGCAGTTGAGGAAGGTTTACA 58.789 45.455 0.00 0.00 0.00 2.41
447 458 5.847111 GGTTTACACCAAAGAAACTCCTT 57.153 39.130 0.00 0.00 43.61 3.36
448 459 5.588240 GGTTTACACCAAAGAAACTCCTTG 58.412 41.667 0.00 0.00 43.61 3.61
450 461 3.018423 ACACCAAAGAAACTCCTTGCT 57.982 42.857 0.00 0.00 0.00 3.91
451 462 3.365472 ACACCAAAGAAACTCCTTGCTT 58.635 40.909 0.00 0.00 0.00 3.91
453 464 4.953579 ACACCAAAGAAACTCCTTGCTTTA 59.046 37.500 0.00 0.00 0.00 1.85
454 465 5.598417 ACACCAAAGAAACTCCTTGCTTTAT 59.402 36.000 0.00 0.00 0.00 1.40
457 468 5.478332 CCAAAGAAACTCCTTGCTTTATCCT 59.522 40.000 0.00 0.00 0.00 3.24
458 469 6.659242 CCAAAGAAACTCCTTGCTTTATCCTA 59.341 38.462 0.00 0.00 0.00 2.94
459 470 7.148171 CCAAAGAAACTCCTTGCTTTATCCTAG 60.148 40.741 0.00 0.00 0.00 3.02
460 471 6.875972 AGAAACTCCTTGCTTTATCCTAGA 57.124 37.500 0.00 0.00 0.00 2.43
461 472 7.259088 AGAAACTCCTTGCTTTATCCTAGAA 57.741 36.000 0.00 0.00 0.00 2.10
462 473 7.106890 AGAAACTCCTTGCTTTATCCTAGAAC 58.893 38.462 0.00 0.00 0.00 3.01
463 474 6.374417 AACTCCTTGCTTTATCCTAGAACA 57.626 37.500 0.00 0.00 0.00 3.18
464 475 5.983540 ACTCCTTGCTTTATCCTAGAACAG 58.016 41.667 0.00 0.00 0.00 3.16
465 476 4.770795 TCCTTGCTTTATCCTAGAACAGC 58.229 43.478 0.00 0.00 0.00 4.40
466 477 4.225042 TCCTTGCTTTATCCTAGAACAGCA 59.775 41.667 0.00 0.00 35.49 4.41
467 478 4.574013 CCTTGCTTTATCCTAGAACAGCAG 59.426 45.833 0.00 0.00 38.45 4.24
468 479 4.142609 TGCTTTATCCTAGAACAGCAGG 57.857 45.455 0.00 0.00 32.38 4.85
469 480 3.118261 TGCTTTATCCTAGAACAGCAGGG 60.118 47.826 0.00 0.00 32.38 4.45
470 481 3.471680 CTTTATCCTAGAACAGCAGGGC 58.528 50.000 0.00 0.00 32.40 5.19
471 482 2.174685 TATCCTAGAACAGCAGGGCA 57.825 50.000 0.00 0.00 32.40 5.36
472 483 1.516110 ATCCTAGAACAGCAGGGCAT 58.484 50.000 0.00 0.00 32.40 4.40
473 484 0.543277 TCCTAGAACAGCAGGGCATG 59.457 55.000 0.00 0.00 32.40 4.06
474 485 0.465097 CCTAGAACAGCAGGGCATGG 60.465 60.000 0.00 0.00 0.00 3.66
475 486 0.254178 CTAGAACAGCAGGGCATGGT 59.746 55.000 0.00 0.00 41.36 3.55
476 487 0.253044 TAGAACAGCAGGGCATGGTC 59.747 55.000 0.00 0.00 37.60 4.02
477 488 1.303561 GAACAGCAGGGCATGGTCA 60.304 57.895 0.00 0.00 37.60 4.02
478 489 1.589716 GAACAGCAGGGCATGGTCAC 61.590 60.000 0.00 0.00 37.60 3.67
479 490 2.034532 CAGCAGGGCATGGTCACA 59.965 61.111 0.00 0.00 37.60 3.58
501 512 7.972832 TCACATTTATAAGCGCATGAAAAATCA 59.027 29.630 11.47 0.00 0.00 2.57
506 517 4.978083 AAGCGCATGAAAAATCATCTCT 57.022 36.364 11.47 0.00 0.00 3.10
509 520 4.397103 AGCGCATGAAAAATCATCTCTTCA 59.603 37.500 11.47 0.00 32.67 3.02
517 528 7.114754 TGAAAAATCATCTCTTCACTATGCCT 58.885 34.615 0.00 0.00 0.00 4.75
531 545 7.136822 TCACTATGCCTACATAAAAGGACAT 57.863 36.000 0.00 0.00 38.29 3.06
535 549 4.339748 TGCCTACATAAAAGGACATTGCA 58.660 39.130 0.00 0.00 36.08 4.08
568 582 6.019479 GCTAACATGTCTTCTGAATAACTCGG 60.019 42.308 0.00 0.00 0.00 4.63
570 584 3.953712 TGTCTTCTGAATAACTCGGCA 57.046 42.857 0.00 0.00 0.00 5.69
586 600 0.685458 GGCATGCACAGGGAGGAAAT 60.685 55.000 21.36 0.00 0.00 2.17
587 601 1.188863 GCATGCACAGGGAGGAAATT 58.811 50.000 14.21 0.00 0.00 1.82
604 618 1.247567 ATTTTTGAGCACCCTCCACG 58.752 50.000 0.00 0.00 37.29 4.94
615 629 1.076677 ACCCTCCACGAGAAGACCTTA 59.923 52.381 0.00 0.00 0.00 2.69
666 695 1.669795 GCTTTCGCAATGGTTTCCCTG 60.670 52.381 0.00 0.00 35.78 4.45
667 696 0.316841 TTTCGCAATGGTTTCCCTGC 59.683 50.000 0.00 0.00 0.00 4.85
669 698 0.825425 TCGCAATGGTTTCCCTGCAA 60.825 50.000 9.48 0.00 32.88 4.08
670 699 0.388907 CGCAATGGTTTCCCTGCAAG 60.389 55.000 9.48 0.00 32.88 4.01
688 717 2.280308 AGGGGTAGCCCTTAACATGA 57.720 50.000 27.44 0.00 44.66 3.07
689 718 2.568979 AGGGGTAGCCCTTAACATGAA 58.431 47.619 27.44 0.00 44.66 2.57
690 719 3.131252 AGGGGTAGCCCTTAACATGAAT 58.869 45.455 27.44 0.37 44.66 2.57
691 720 3.531814 AGGGGTAGCCCTTAACATGAATT 59.468 43.478 27.44 0.00 44.66 2.17
692 721 4.016572 AGGGGTAGCCCTTAACATGAATTT 60.017 41.667 27.44 0.00 44.66 1.82
693 722 5.194942 AGGGGTAGCCCTTAACATGAATTTA 59.805 40.000 27.44 0.00 44.66 1.40
694 723 5.535030 GGGGTAGCCCTTAACATGAATTTAG 59.465 44.000 23.31 0.00 44.66 1.85
695 724 5.535030 GGGTAGCCCTTAACATGAATTTAGG 59.465 44.000 0.00 0.00 41.34 2.69
696 725 6.127101 GGTAGCCCTTAACATGAATTTAGGT 58.873 40.000 0.00 0.00 0.00 3.08
697 726 6.605995 GGTAGCCCTTAACATGAATTTAGGTT 59.394 38.462 0.00 5.57 0.00 3.50
698 727 6.530019 AGCCCTTAACATGAATTTAGGTTG 57.470 37.500 10.16 0.00 0.00 3.77
1449 1506 0.109597 CCTGGTTCATGTTCGCTTGC 60.110 55.000 0.00 0.00 0.00 4.01
1467 1524 1.265462 GCGTTGCTCGAGATCTAGCG 61.265 60.000 18.75 13.06 41.77 4.26
1540 1597 7.554118 TCCATTTCTGTGATCTAGATTTTGACC 59.446 37.037 6.70 0.00 0.00 4.02
1548 1605 1.393539 CTAGATTTTGACCGCGGTGTG 59.606 52.381 39.65 7.13 0.00 3.82
1565 1622 4.320421 CGGTGTGTTCAAATCATCATGTGT 60.320 41.667 0.00 0.00 0.00 3.72
1606 1665 6.149308 CACTAACATAAGTCATTGCTGGTCAA 59.851 38.462 0.00 0.00 39.32 3.18
1611 1670 6.379133 ACATAAGTCATTGCTGGTCAATTGAT 59.621 34.615 12.12 0.00 42.48 2.57
1613 1672 5.068234 AGTCATTGCTGGTCAATTGATTG 57.932 39.130 12.12 6.21 42.48 2.67
1624 1683 7.274250 GCTGGTCAATTGATTGTTAAGATCAAC 59.726 37.037 12.12 5.19 43.87 3.18
1626 1685 8.298854 TGGTCAATTGATTGTTAAGATCAACAG 58.701 33.333 12.12 10.35 43.87 3.16
1627 1686 7.274250 GGTCAATTGATTGTTAAGATCAACAGC 59.726 37.037 12.12 8.62 43.87 4.40
1628 1687 8.025445 GTCAATTGATTGTTAAGATCAACAGCT 58.975 33.333 12.12 0.00 43.87 4.24
1629 1688 8.024865 TCAATTGATTGTTAAGATCAACAGCTG 58.975 33.333 13.48 13.48 43.87 4.24
1634 1693 4.905429 TGTTAAGATCAACAGCTGGCTAA 58.095 39.130 19.93 0.33 33.55 3.09
1635 1694 5.500234 TGTTAAGATCAACAGCTGGCTAAT 58.500 37.500 19.93 5.76 33.55 1.73
1644 1703 5.066893 TCAACAGCTGGCTAATTCATTCATC 59.933 40.000 19.93 0.00 0.00 2.92
1684 1770 9.683069 AGTTTCACTTTGTTTCTATATTTGCTG 57.317 29.630 0.00 0.00 0.00 4.41
1693 1779 8.560355 TGTTTCTATATTTGCTGCTTGAGTTA 57.440 30.769 0.00 0.00 0.00 2.24
1694 1780 9.177608 TGTTTCTATATTTGCTGCTTGAGTTAT 57.822 29.630 0.00 0.00 0.00 1.89
1715 1822 9.323985 AGTTATCATCAGACTTGCTAATTCTTC 57.676 33.333 0.00 0.00 0.00 2.87
1716 1823 9.323985 GTTATCATCAGACTTGCTAATTCTTCT 57.676 33.333 0.00 0.00 0.00 2.85
1740 1848 5.053145 GCATTGGTGGTTCTCTAGACATAG 58.947 45.833 0.00 0.00 0.00 2.23
1744 1852 3.954904 GGTGGTTCTCTAGACATAGCTCA 59.045 47.826 0.00 0.00 0.00 4.26
1755 1863 2.932614 GACATAGCTCATGCGAGTTTGT 59.067 45.455 0.00 0.00 45.42 2.83
1826 1934 5.745294 CGTATTGATCCTTTTGAATTGCTGG 59.255 40.000 0.00 0.00 0.00 4.85
1840 1948 0.964700 TGCTGGACTCTGTCTCACTG 59.035 55.000 0.00 0.00 32.47 3.66
1897 2005 5.319140 TGAGTTTGAAGAATGATGCATGG 57.681 39.130 2.46 0.00 0.00 3.66
1909 2017 3.433343 TGATGCATGGAGTTGGACAATT 58.567 40.909 2.46 0.00 0.00 2.32
1956 2064 8.873215 TGTACATTTGCTTCTAGAGTTATAGC 57.127 34.615 6.44 6.44 0.00 2.97
1971 2080 0.250166 ATAGCGATAAACGTGCCCCC 60.250 55.000 0.00 0.00 44.60 5.40
1973 2082 2.184836 CGATAAACGTGCCCCCGA 59.815 61.111 0.00 0.00 37.22 5.14
1991 2100 3.003068 CCCGATTCTGTTGCTTGATGATC 59.997 47.826 0.00 0.00 0.00 2.92
2080 2272 8.565896 TCTCATTATGTTCACTTTAATGCAGT 57.434 30.769 0.00 0.00 0.00 4.40
2296 2488 8.937835 TCTTCATATGGGAACTGATTTGATCTA 58.062 33.333 2.13 0.00 0.00 1.98
2339 2531 0.609131 AGGCTGCCTATGCGTTGTTT 60.609 50.000 21.98 0.00 41.78 2.83
2423 2617 9.330063 GAAACTGACAACATCCAAGATATATGA 57.670 33.333 0.00 0.00 0.00 2.15
2446 2640 3.820467 TCTTAGTGGCTTTGACCAACATG 59.180 43.478 0.00 0.00 42.70 3.21
2722 3043 7.338449 TGGAAAGTAGATAATACTGCAAAACCC 59.662 37.037 0.00 0.00 0.00 4.11
2729 3050 0.402504 TACTGCAAAACCCGACCCAT 59.597 50.000 0.00 0.00 0.00 4.00
2736 3057 3.150767 CAAAACCCGACCCATAAGTGAA 58.849 45.455 0.00 0.00 0.00 3.18
2741 3062 4.014406 ACCCGACCCATAAGTGAATTTTC 58.986 43.478 0.00 0.00 0.00 2.29
2749 3071 8.934023 ACCCATAAGTGAATTTTCTTTCTACA 57.066 30.769 2.35 0.00 0.00 2.74
2763 3085 8.758633 TTTCTTTCTACAGCATAACAGTAGTC 57.241 34.615 0.00 0.00 38.96 2.59
2799 3121 9.339850 TGTATAGTCTTATGGTCTCAGAAGTAC 57.660 37.037 0.00 0.00 41.50 2.73
2810 3132 5.405873 GGTCTCAGAAGTACTTGTGTTAAGC 59.594 44.000 26.64 19.25 35.60 3.09
2823 3145 7.793902 ACTTGTGTTAAGCTTCGTAATAGTTG 58.206 34.615 0.00 0.00 0.00 3.16
2866 3189 2.034687 CTGGTGGGCAAGGAGTGG 59.965 66.667 0.00 0.00 0.00 4.00
2868 3191 2.357593 CTGGTGGGCAAGGAGTGGTT 62.358 60.000 0.00 0.00 0.00 3.67
2884 3207 2.232941 GTGGTTCCGTCAGTGATCCTTA 59.767 50.000 0.00 0.00 0.00 2.69
2905 3229 9.213777 TCCTTATTTCACTATAATGGTGTCTCT 57.786 33.333 0.00 0.00 36.25 3.10
2911 3235 6.051074 TCACTATAATGGTGTCTCTGCATTG 58.949 40.000 0.00 0.00 36.25 2.82
2924 3248 3.081061 TCTGCATTGATTGTACACCACC 58.919 45.455 0.00 0.00 0.00 4.61
2930 3254 1.003118 TGATTGTACACCACCTCCTGC 59.997 52.381 0.00 0.00 0.00 4.85
2945 3269 4.910304 ACCTCCTGCTTTACATCATAGGAT 59.090 41.667 0.00 0.00 34.15 3.24
2951 3275 9.492730 TCCTGCTTTACATCATAGGATATATGA 57.507 33.333 0.40 0.40 38.20 2.15
2966 3290 6.151985 AGGATATATGAAAGTAGTGGAGCTCG 59.848 42.308 7.83 0.00 0.00 5.03
2992 3316 3.118038 GGATTGGTCTAGTGGGCAACATA 60.118 47.826 0.00 0.00 39.74 2.29
3020 3346 6.542735 CCATAAGGGCCTACTTCTTTTTCTAC 59.457 42.308 6.41 0.00 32.02 2.59
3048 3374 4.941263 AGCGCTGATAACTGTTTTGGATTA 59.059 37.500 10.39 0.00 0.00 1.75
3091 3417 8.008104 TCATAGGATATAAGGAAGTAGTGGGA 57.992 38.462 0.00 0.00 0.00 4.37
3105 3431 2.787473 GTGGGACTCACATGGATTGA 57.213 50.000 0.00 0.00 45.39 2.57
3118 3444 5.468072 CACATGGATTGATCTAGTAGGCAAC 59.532 44.000 0.00 4.34 0.00 4.17
3120 3446 5.023533 TGGATTGATCTAGTAGGCAACAC 57.976 43.478 8.06 5.88 41.41 3.32
3150 3476 4.301637 ACGGCCTAAACTTGTTTTTCTG 57.698 40.909 0.00 2.78 0.00 3.02
3152 3478 4.883006 ACGGCCTAAACTTGTTTTTCTGTA 59.117 37.500 0.00 0.00 0.00 2.74
3158 3484 8.135529 GCCTAAACTTGTTTTTCTGTATTCAGT 58.864 33.333 4.00 0.00 41.91 3.41
3163 3489 6.318648 ACTTGTTTTTCTGTATTCAGTGCTGA 59.681 34.615 0.00 0.00 41.91 4.26
3164 3490 6.882610 TGTTTTTCTGTATTCAGTGCTGAT 57.117 33.333 2.47 0.00 41.91 2.90
3165 3491 7.977789 TGTTTTTCTGTATTCAGTGCTGATA 57.022 32.000 2.47 0.00 41.91 2.15
3169 3495 9.719355 TTTTTCTGTATTCAGTGCTGATAACTA 57.281 29.630 2.47 0.00 41.91 2.24
3198 3524 9.442062 TTGGATTGGGTCTAGTACTTTCATATA 57.558 33.333 0.00 0.00 0.00 0.86
3204 3530 8.314021 TGGGTCTAGTACTTTCATATATGCATG 58.686 37.037 10.16 2.49 0.00 4.06
3212 3539 9.463443 GTACTTTCATATATGCATGGTTTTTCC 57.537 33.333 10.16 0.00 0.00 3.13
3243 3570 4.933505 TCTGAGCTTCCTGAGATATGTG 57.066 45.455 0.00 0.00 0.00 3.21
3246 3573 3.067320 TGAGCTTCCTGAGATATGTGTCG 59.933 47.826 0.00 0.00 0.00 4.35
3291 3618 4.023707 CGAGTATTGGAAGGGAATGCAATC 60.024 45.833 0.00 0.00 40.06 2.67
3375 4144 4.274147 TGTTCAGAGTTGGTTTGGCTTAA 58.726 39.130 0.00 0.00 0.00 1.85
3390 4159 8.620416 GGTTTGGCTTAAAGAATTTTCATGTTT 58.380 29.630 0.00 0.00 40.09 2.83
3391 4160 9.437045 GTTTGGCTTAAAGAATTTTCATGTTTG 57.563 29.630 0.00 0.00 40.09 2.93
3423 4192 0.687354 TGTCAAGTTCTGCTCCCTCC 59.313 55.000 0.00 0.00 0.00 4.30
3432 4201 1.133167 TCTGCTCCCTCCGATCCAATA 60.133 52.381 0.00 0.00 0.00 1.90
3437 4206 3.515901 GCTCCCTCCGATCCAATATACTT 59.484 47.826 0.00 0.00 0.00 2.24
3459 4228 8.485976 ACTTGTCTCTTCTGTATATTTTCTGC 57.514 34.615 0.00 0.00 0.00 4.26
3527 4296 8.523658 TCTGGATCAACTATAAGATAATGTCCG 58.476 37.037 0.00 0.00 0.00 4.79
3609 4387 5.628193 GTGAATGACAATGCTTCTTCAAGTG 59.372 40.000 0.00 0.00 31.45 3.16
3622 4400 8.164539 GCTTCTTCAAGTGTTAGCTTCAGCTT 62.165 42.308 6.64 0.00 40.96 3.74
3623 4401 8.901016 GCTTCTTCAAGTGTTAGCTTCAGCTTA 61.901 40.741 6.64 0.00 40.96 3.09
3635 4413 5.362556 GCTTCAGCTTACTTTGACATTGA 57.637 39.130 0.00 0.00 38.21 2.57
3636 4414 5.149977 GCTTCAGCTTACTTTGACATTGAC 58.850 41.667 0.00 0.00 38.21 3.18
3637 4415 5.277974 GCTTCAGCTTACTTTGACATTGACA 60.278 40.000 0.00 0.00 38.21 3.58
3638 4416 6.569226 GCTTCAGCTTACTTTGACATTGACAT 60.569 38.462 0.00 0.00 38.21 3.06
3639 4417 6.245115 TCAGCTTACTTTGACATTGACATG 57.755 37.500 0.00 0.00 36.34 3.21
3640 4418 4.855388 CAGCTTACTTTGACATTGACATGC 59.145 41.667 0.00 0.00 33.05 4.06
3641 4419 4.520111 AGCTTACTTTGACATTGACATGCA 59.480 37.500 0.00 0.00 33.05 3.96
3642 4420 5.184479 AGCTTACTTTGACATTGACATGCAT 59.816 36.000 0.00 0.00 33.05 3.96
3713 4491 2.170607 TGCCTAATCAGTTGTAGGAGGC 59.829 50.000 3.04 3.04 46.63 4.70
3721 4499 2.093447 CAGTTGTAGGAGGCCTAAGTGG 60.093 54.545 4.42 0.00 37.91 4.00
3725 4503 1.481363 GTAGGAGGCCTAAGTGGTGTC 59.519 57.143 4.42 0.00 37.91 3.67
3729 4507 2.436115 GCCTAAGTGGTGTCGGGC 60.436 66.667 0.00 0.00 38.35 6.13
3804 4582 9.599866 CTTGTTGTTCTCAGTGAATATGGTATA 57.400 33.333 0.00 0.00 36.99 1.47
3809 4587 7.874528 TGTTCTCAGTGAATATGGTATATGCTG 59.125 37.037 0.00 0.00 36.99 4.41
3815 4593 6.155910 AGTGAATATGGTATATGCTGCTAGCT 59.844 38.462 17.23 0.00 42.97 3.32
3833 4611 5.760253 GCTAGCTTGGACATGTATGTAATGT 59.240 40.000 7.70 0.00 41.95 2.71
3847 4625 5.687166 ATGTAATGTCCGGGAGAAAGTTA 57.313 39.130 0.00 0.00 0.00 2.24
3857 4635 6.922407 GTCCGGGAGAAAGTTAGTTATGTATC 59.078 42.308 0.00 0.00 0.00 2.24
3941 4845 3.427161 GCACAGTGCAAAGAGAACTTT 57.573 42.857 21.22 0.00 45.75 2.66
3942 4846 3.774066 GCACAGTGCAAAGAGAACTTTT 58.226 40.909 21.22 0.00 43.41 2.27
3943 4847 3.793492 GCACAGTGCAAAGAGAACTTTTC 59.207 43.478 21.22 0.00 43.41 2.29
3944 4848 4.031028 CACAGTGCAAAGAGAACTTTTCG 58.969 43.478 0.00 0.00 43.41 3.46
3945 4849 3.938963 ACAGTGCAAAGAGAACTTTTCGA 59.061 39.130 0.00 0.00 43.41 3.71
3946 4850 4.034510 ACAGTGCAAAGAGAACTTTTCGAG 59.965 41.667 0.00 0.00 43.41 4.04
3947 4851 3.002759 AGTGCAAAGAGAACTTTTCGAGC 59.997 43.478 0.00 0.00 43.41 5.03
3948 4852 2.942376 TGCAAAGAGAACTTTTCGAGCA 59.058 40.909 0.00 0.00 43.41 4.26
3949 4853 3.565482 TGCAAAGAGAACTTTTCGAGCAT 59.435 39.130 0.00 0.00 43.41 3.79
3950 4854 4.154717 GCAAAGAGAACTTTTCGAGCATC 58.845 43.478 0.00 0.00 43.41 3.91
3951 4855 4.716943 CAAAGAGAACTTTTCGAGCATCC 58.283 43.478 0.00 0.00 43.41 3.51
3952 4856 3.685139 AGAGAACTTTTCGAGCATCCA 57.315 42.857 0.00 0.00 34.02 3.41
3953 4857 4.008074 AGAGAACTTTTCGAGCATCCAA 57.992 40.909 0.00 0.00 34.02 3.53
3954 4858 4.389374 AGAGAACTTTTCGAGCATCCAAA 58.611 39.130 0.00 0.00 34.02 3.28
3955 4859 4.821805 AGAGAACTTTTCGAGCATCCAAAA 59.178 37.500 0.00 0.00 34.02 2.44
3956 4860 4.860072 AGAACTTTTCGAGCATCCAAAAC 58.140 39.130 0.00 0.00 34.02 2.43
3957 4861 4.580580 AGAACTTTTCGAGCATCCAAAACT 59.419 37.500 0.00 0.00 34.02 2.66
3958 4862 5.763204 AGAACTTTTCGAGCATCCAAAACTA 59.237 36.000 0.00 0.00 34.02 2.24
3959 4863 6.431234 AGAACTTTTCGAGCATCCAAAACTAT 59.569 34.615 0.00 0.00 34.02 2.12
3960 4864 7.606456 AGAACTTTTCGAGCATCCAAAACTATA 59.394 33.333 0.00 0.00 34.02 1.31
3961 4865 7.681939 ACTTTTCGAGCATCCAAAACTATAA 57.318 32.000 0.00 0.00 0.00 0.98
3962 4866 8.281212 ACTTTTCGAGCATCCAAAACTATAAT 57.719 30.769 0.00 0.00 0.00 1.28
3963 4867 9.391006 ACTTTTCGAGCATCCAAAACTATAATA 57.609 29.630 0.00 0.00 0.00 0.98
3966 4870 9.778741 TTTCGAGCATCCAAAACTATAATATCT 57.221 29.630 0.00 0.00 0.00 1.98
3967 4871 8.988064 TCGAGCATCCAAAACTATAATATCTC 57.012 34.615 0.00 0.00 0.00 2.75
3968 4872 8.807118 TCGAGCATCCAAAACTATAATATCTCT 58.193 33.333 0.00 0.00 0.00 3.10
3969 4873 9.081997 CGAGCATCCAAAACTATAATATCTCTC 57.918 37.037 0.00 0.00 0.00 3.20
3979 4900 2.829741 AATATCTCTCTTCTGCCGCC 57.170 50.000 0.00 0.00 0.00 6.13
4105 5035 3.370104 TGGGTGAAACATTTGTTGGAGT 58.630 40.909 0.00 0.00 39.98 3.85
4138 5068 5.471456 CCATGAGTTCCTAAACCTGCATATC 59.529 44.000 0.00 0.00 35.92 1.63
4249 5194 8.118976 ACCTTGCAATTTGATATGATCCTATG 57.881 34.615 0.00 0.00 0.00 2.23
4367 5312 7.906327 ACCTTGCAATTTATTTGTGATACCTT 58.094 30.769 0.00 0.00 37.65 3.50
4410 5355 3.884169 TGCTAACACACATTCGAAAAGC 58.116 40.909 0.00 2.49 0.00 3.51
4414 5359 1.263217 ACACACATTCGAAAAGCGGTC 59.737 47.619 0.00 0.00 41.33 4.79
4415 5360 1.531149 CACACATTCGAAAAGCGGTCT 59.469 47.619 0.00 0.00 41.33 3.85
4416 5361 1.531149 ACACATTCGAAAAGCGGTCTG 59.469 47.619 0.00 0.00 41.33 3.51
4417 5362 1.531149 CACATTCGAAAAGCGGTCTGT 59.469 47.619 0.00 0.00 41.33 3.41
4418 5363 2.734606 CACATTCGAAAAGCGGTCTGTA 59.265 45.455 0.00 0.00 41.33 2.74
4419 5364 3.185594 CACATTCGAAAAGCGGTCTGTAA 59.814 43.478 0.00 0.00 41.33 2.41
4420 5365 3.185797 ACATTCGAAAAGCGGTCTGTAAC 59.814 43.478 0.00 0.00 41.33 2.50
4421 5366 2.512485 TCGAAAAGCGGTCTGTAACA 57.488 45.000 0.00 0.00 41.33 2.41
4422 5367 2.823984 TCGAAAAGCGGTCTGTAACAA 58.176 42.857 0.00 0.00 41.33 2.83
4423 5368 3.395639 TCGAAAAGCGGTCTGTAACAAT 58.604 40.909 0.00 0.00 41.33 2.71
4424 5369 3.810941 TCGAAAAGCGGTCTGTAACAATT 59.189 39.130 0.00 0.00 41.33 2.32
4425 5370 4.273969 TCGAAAAGCGGTCTGTAACAATTT 59.726 37.500 0.00 0.00 41.33 1.82
4428 5386 6.799925 CGAAAAGCGGTCTGTAACAATTTATT 59.200 34.615 0.00 0.00 36.03 1.40
4522 5480 7.589958 TTGCTCAGGGTTTAGAATAACAAAA 57.410 32.000 0.00 0.00 0.00 2.44
4570 5529 9.403583 GAATTATGTACTTGGTGAATCCCTTTA 57.596 33.333 0.00 0.00 34.77 1.85
4599 5558 9.191995 CATGGTTTAGAATAACAAGAACAAACC 57.808 33.333 0.00 0.00 42.46 3.27
4645 5606 7.422399 GTTCTGCCTAAATTTACAACAGTTGA 58.578 34.615 20.56 0.00 0.00 3.18
4648 5609 9.290988 TCTGCCTAAATTTACAACAGTTGAATA 57.709 29.630 20.56 0.00 0.00 1.75
4694 5655 3.198417 GCATGGGATCCAAAAACATTCCT 59.802 43.478 15.23 0.00 36.95 3.36
4763 5724 3.002348 GTCAGGATAAAAGGCCGAATTCG 59.998 47.826 20.92 20.92 39.44 3.34
4823 5784 6.094464 TCGAGTTCATCCGTTCTTCTTGTATA 59.906 38.462 0.00 0.00 0.00 1.47
4824 5785 6.750501 CGAGTTCATCCGTTCTTCTTGTATAA 59.249 38.462 0.00 0.00 0.00 0.98
4826 5787 8.842358 AGTTCATCCGTTCTTCTTGTATAAAA 57.158 30.769 0.00 0.00 0.00 1.52
4827 5788 9.280174 AGTTCATCCGTTCTTCTTGTATAAAAA 57.720 29.630 0.00 0.00 0.00 1.94
4859 6147 7.229907 GGTTAAAGACCTAACAAATGGAACTGA 59.770 37.037 0.00 0.00 45.55 3.41
4861 6149 6.884280 AAGACCTAACAAATGGAACTGAAG 57.116 37.500 0.00 0.00 0.00 3.02
5175 6471 5.796350 AAACTCGCCATCTTACACATAAC 57.204 39.130 0.00 0.00 0.00 1.89
5196 6492 8.879759 CATAACCATGTTTAACTGTACCAGTAG 58.120 37.037 0.00 0.00 44.62 2.57
5228 6524 1.310933 GGGTCTCAGCATGCCAACTG 61.311 60.000 15.66 6.16 34.76 3.16
5348 6645 1.667724 GAGTGATCTTTGCGATGGTGG 59.332 52.381 0.00 0.00 30.84 4.61
5474 6772 1.518367 TTTTCACTCCCCTGGTGTCT 58.482 50.000 0.00 0.00 36.25 3.41
5495 6793 4.053295 CTGTTTGAAATTGACTGCTTGGG 58.947 43.478 0.00 0.00 0.00 4.12
5628 6927 2.573369 CCAGATTCCCTCATGCTGAAG 58.427 52.381 0.00 0.00 0.00 3.02
5642 6941 2.826428 GCTGAAGGCATATGTCGAAGA 58.174 47.619 4.29 0.00 41.35 2.87
5715 7014 9.489084 TCATGTATTAGTAAATGATGTGGCTAC 57.511 33.333 0.00 0.00 31.08 3.58
5765 7064 4.681074 AGTTAGAGCCATAGGAAAGAGC 57.319 45.455 0.00 0.00 0.00 4.09
5781 7080 5.392595 GGAAAGAGCCGCAATTGTTATGTTA 60.393 40.000 7.40 0.00 0.00 2.41
5915 7216 7.067532 ACAGCATCAAATTTGCATAATTGTG 57.932 32.000 13.54 0.00 42.62 3.33
6024 7335 5.221722 TGTTACTATTGGATCCTGGATGCTC 60.222 44.000 25.68 8.36 31.64 4.26
6054 7365 1.149361 TCAACCACGAGAACACGCAC 61.149 55.000 0.00 0.00 36.70 5.34
6121 7432 4.016444 GGACATTCCAAAATGCTCAGGTA 58.984 43.478 0.00 0.00 45.16 3.08
6161 7472 4.092091 CAGTTTGTATCTTCAGCCGACTTC 59.908 45.833 0.00 0.00 0.00 3.01
6196 7507 5.068636 AGCGCTTGATGAAATATGGATCTT 58.931 37.500 2.64 0.00 0.00 2.40
6197 7508 5.180868 AGCGCTTGATGAAATATGGATCTTC 59.819 40.000 2.64 0.00 0.00 2.87
6349 7673 2.926242 GGGTGGTCCAACGGAGGA 60.926 66.667 0.00 0.00 35.00 3.71
6355 7679 3.319198 TCCAACGGAGGACCAGGC 61.319 66.667 0.00 0.00 35.59 4.85
6356 7680 4.760047 CCAACGGAGGACCAGGCG 62.760 72.222 0.00 0.00 35.59 5.52
6387 7752 4.415150 CTGGACCAGGCGGCATGT 62.415 66.667 14.26 7.53 34.57 3.21
6436 7801 3.881688 CCAATAGATTCTTGGAGTGCCTG 59.118 47.826 0.00 0.00 44.95 4.85
6452 7817 1.530293 GCCTGCACATCTGATTCGATC 59.470 52.381 0.00 0.00 0.00 3.69
6467 7837 1.337071 TCGATCCGAACATCAGGTAGC 59.663 52.381 0.00 0.00 31.06 3.58
6495 7878 0.038709 TGCCGTTTTGCAAGCATACC 60.039 50.000 6.97 0.00 38.56 2.73
6496 7879 0.038709 GCCGTTTTGCAAGCATACCA 60.039 50.000 0.00 0.00 0.00 3.25
6497 7880 1.696988 CCGTTTTGCAAGCATACCAC 58.303 50.000 0.00 0.00 0.00 4.16
6498 7881 1.668628 CCGTTTTGCAAGCATACCACC 60.669 52.381 0.00 0.00 0.00 4.61
6499 7882 1.000827 CGTTTTGCAAGCATACCACCA 60.001 47.619 0.00 0.00 0.00 4.17
6500 7883 2.544694 CGTTTTGCAAGCATACCACCAA 60.545 45.455 0.00 0.00 0.00 3.67
6501 7884 3.059166 GTTTTGCAAGCATACCACCAAG 58.941 45.455 0.00 0.00 0.00 3.61
6502 7885 0.602562 TTGCAAGCATACCACCAAGC 59.397 50.000 0.00 0.00 0.00 4.01
6503 7886 0.539207 TGCAAGCATACCACCAAGCA 60.539 50.000 0.00 0.00 0.00 3.91
6504 7887 0.109132 GCAAGCATACCACCAAGCAC 60.109 55.000 0.00 0.00 0.00 4.40
6505 7888 0.168788 CAAGCATACCACCAAGCACG 59.831 55.000 0.00 0.00 0.00 5.34
6506 7889 1.586154 AAGCATACCACCAAGCACGC 61.586 55.000 0.00 0.00 0.00 5.34
6523 7906 1.516423 GCTGACGAGGAACCCTACC 59.484 63.158 0.00 0.00 31.76 3.18
6607 7991 3.242284 CCACAACTGTATCATTTACCGCG 60.242 47.826 0.00 0.00 0.00 6.46
6640 8046 0.177141 TGGTGTATAGAAGGGTGCGC 59.823 55.000 0.00 0.00 0.00 6.09
6652 8058 1.280998 AGGGTGCGCTAGGTACAAATT 59.719 47.619 9.73 0.00 32.16 1.82
6653 8059 1.400494 GGGTGCGCTAGGTACAAATTG 59.600 52.381 9.73 0.00 32.16 2.32
6654 8060 2.352388 GGTGCGCTAGGTACAAATTGA 58.648 47.619 9.73 0.00 32.16 2.57
6655 8061 2.745281 GGTGCGCTAGGTACAAATTGAA 59.255 45.455 9.73 0.00 32.16 2.69
6656 8062 3.377172 GGTGCGCTAGGTACAAATTGAAT 59.623 43.478 9.73 0.00 32.16 2.57
6688 8103 0.722848 CATGCATTTTGCTTTCCGCC 59.277 50.000 0.00 0.00 45.31 6.13
6702 8117 2.571757 CGCCAAGACGGTGCTAGA 59.428 61.111 0.00 0.00 38.79 2.43
6722 8137 7.093552 TGCTAGACTAGAAATCAGCTCTTTCTT 60.094 37.037 20.34 8.47 41.78 2.52
6731 8146 7.704047 AGAAATCAGCTCTTTCTTTTGTCAAAC 59.296 33.333 12.86 0.00 39.34 2.93
6755 8171 2.149578 CTGGATTGCTCGATTGGATCC 58.850 52.381 4.20 4.20 37.40 3.36
6758 8174 2.810852 GGATTGCTCGATTGGATCCTTC 59.189 50.000 14.23 9.12 34.73 3.46
6759 8175 3.470709 GATTGCTCGATTGGATCCTTCA 58.529 45.455 14.23 0.00 0.00 3.02
6760 8176 3.348647 TTGCTCGATTGGATCCTTCAA 57.651 42.857 14.23 0.00 0.00 2.69
6830 8250 3.690628 GTCGCCAACTAGAGAAGTAGAGT 59.309 47.826 0.00 0.00 37.50 3.24
6841 8261 4.058817 GAGAAGTAGAGTTGTTGGTGGTG 58.941 47.826 0.00 0.00 0.00 4.17
6843 8263 2.124411 AGTAGAGTTGTTGGTGGTGGT 58.876 47.619 0.00 0.00 0.00 4.16
6846 8266 5.088730 AGTAGAGTTGTTGGTGGTGGTATA 58.911 41.667 0.00 0.00 0.00 1.47
6852 8272 4.229304 TGTTGGTGGTGGTATAGAATGG 57.771 45.455 0.00 0.00 0.00 3.16
6853 8273 3.053991 TGTTGGTGGTGGTATAGAATGGG 60.054 47.826 0.00 0.00 0.00 4.00
6854 8274 3.138123 TGGTGGTGGTATAGAATGGGA 57.862 47.619 0.00 0.00 0.00 4.37
6903 8323 3.713248 TGATGATGGGTCTTGCAGTAGAT 59.287 43.478 0.00 0.00 0.00 1.98
6913 8333 5.040635 GTCTTGCAGTAGATTAGCTGTCTC 58.959 45.833 6.72 0.00 35.33 3.36
6919 8342 2.559381 AGATTAGCTGTCTCTGGGGT 57.441 50.000 0.00 0.00 0.00 4.95
6922 8345 1.853963 TTAGCTGTCTCTGGGGTCTC 58.146 55.000 0.00 0.00 0.00 3.36
6927 8350 1.079750 GTCTCTGGGGTCTCGCAAC 60.080 63.158 0.00 0.00 35.37 4.17
6944 8367 1.122019 AACTCCACGGACTCCAGCTT 61.122 55.000 0.00 0.00 0.00 3.74
7010 8433 4.998979 GCGAAAGGCATTTAATTTCTCG 57.001 40.909 0.00 0.00 42.87 4.04
7019 8442 6.974622 AGGCATTTAATTTCTCGCTTGTATTG 59.025 34.615 0.00 0.00 0.00 1.90
7085 8522 1.077501 CCACATCCGAATGGGCTGT 60.078 57.895 0.00 0.00 34.74 4.40
7096 8537 0.929244 ATGGGCTGTTTATCCTGCCT 59.071 50.000 8.64 0.00 45.73 4.75
7128 8574 5.500931 CGAACGAATCTAGCAAGTTTCATCC 60.501 44.000 0.00 0.00 32.97 3.51
7138 8584 2.476873 AGTTTCATCCGTCGATCTCG 57.523 50.000 0.00 0.00 41.45 4.04
7140 8586 0.738975 TTTCATCCGTCGATCTCGCT 59.261 50.000 0.00 0.00 39.60 4.93
7164 8611 4.708726 AGATCATCCAAAAGGCTTTTCG 57.291 40.909 21.77 16.01 0.00 3.46
7175 8622 2.783440 GCTTTTCGCCGTGTTTCAG 58.217 52.632 0.00 0.00 0.00 3.02
7177 8624 1.262151 GCTTTTCGCCGTGTTTCAGTA 59.738 47.619 0.00 0.00 0.00 2.74
7180 8627 3.367992 TTTCGCCGTGTTTCAGTACTA 57.632 42.857 0.00 0.00 0.00 1.82
7181 8628 2.624316 TCGCCGTGTTTCAGTACTAG 57.376 50.000 0.00 0.00 0.00 2.57
7183 8630 3.073678 TCGCCGTGTTTCAGTACTAGTA 58.926 45.455 0.00 0.00 0.00 1.82
7184 8631 3.501828 TCGCCGTGTTTCAGTACTAGTAA 59.498 43.478 3.61 0.00 0.00 2.24
7185 8632 4.023279 TCGCCGTGTTTCAGTACTAGTAAA 60.023 41.667 3.61 0.00 0.00 2.01
7209 8954 2.839486 TTCACGGAGATGAAACAGCT 57.161 45.000 0.00 0.00 35.65 4.24
7220 8974 2.951726 TGAAACAGCTCTGTCGATCAG 58.048 47.619 2.68 8.24 44.13 2.90
7236 8990 2.354109 TCAGTCATCGAGCTGTTGTC 57.646 50.000 12.19 0.00 34.57 3.18
7237 8991 0.987715 CAGTCATCGAGCTGTTGTCG 59.012 55.000 0.00 0.00 38.84 4.35
7310 9065 4.147322 GTCGTCACGGGCAATGCG 62.147 66.667 0.00 0.00 0.00 4.73
7338 9093 2.815647 GCGACCACAGTGGCTAGC 60.816 66.667 20.48 17.80 43.74 3.42
7339 9094 2.656646 CGACCACAGTGGCTAGCA 59.343 61.111 20.48 0.00 42.67 3.49
7340 9095 1.446792 CGACCACAGTGGCTAGCAG 60.447 63.158 20.48 5.62 42.67 4.24
7343 9098 0.898320 ACCACAGTGGCTAGCAGTAG 59.102 55.000 20.48 6.00 42.67 2.57
7344 9099 1.186200 CCACAGTGGCTAGCAGTAGA 58.814 55.000 18.24 0.00 0.00 2.59
7345 9100 1.134965 CCACAGTGGCTAGCAGTAGAC 60.135 57.143 18.24 4.62 34.38 2.59
7346 9101 1.821753 CACAGTGGCTAGCAGTAGACT 59.178 52.381 18.24 6.89 34.96 3.24
7348 9103 3.066064 CACAGTGGCTAGCAGTAGACTAG 59.934 52.174 18.24 7.29 40.13 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 111 1.520666 GGTGTGTGGGCGCTAGTAT 59.479 57.895 7.64 0.00 0.00 2.12
120 122 1.039068 TGATGCAAAAGGGTGTGTGG 58.961 50.000 0.00 0.00 0.00 4.17
122 124 2.106566 TGTTGATGCAAAAGGGTGTGT 58.893 42.857 0.00 0.00 0.00 3.72
246 248 3.129113 CGATGGAGATGATAGAGGAGCTG 59.871 52.174 0.00 0.00 0.00 4.24
254 256 0.459237 GCGGGCGATGGAGATGATAG 60.459 60.000 0.00 0.00 0.00 2.08
256 258 1.762522 AAGCGGGCGATGGAGATGAT 61.763 55.000 0.00 0.00 0.00 2.45
257 259 2.369257 GAAGCGGGCGATGGAGATGA 62.369 60.000 0.00 0.00 0.00 2.92
259 261 2.423446 GAAGCGGGCGATGGAGAT 59.577 61.111 0.00 0.00 0.00 2.75
260 262 4.207281 CGAAGCGGGCGATGGAGA 62.207 66.667 0.00 0.00 0.00 3.71
272 274 5.140747 AGAGATGGTATATCAACCGAAGC 57.859 43.478 0.00 0.00 42.91 3.86
312 314 2.886913 TGGGCAATCTGGAACAATCAA 58.113 42.857 0.00 0.00 38.70 2.57
315 317 4.586001 GTGATATGGGCAATCTGGAACAAT 59.414 41.667 0.00 0.00 38.70 2.71
326 328 2.100584 GCAATTTCCGTGATATGGGCAA 59.899 45.455 0.00 0.00 0.00 4.52
331 333 3.737266 GCCATTGCAATTTCCGTGATATG 59.263 43.478 9.83 0.00 37.47 1.78
333 335 2.223456 CGCCATTGCAATTTCCGTGATA 60.223 45.455 9.83 0.00 37.32 2.15
339 341 2.166579 CGCCGCCATTGCAATTTCC 61.167 57.895 9.83 0.00 37.32 3.13
344 354 0.534877 AGATATCGCCGCCATTGCAA 60.535 50.000 0.00 0.00 37.32 4.08
350 360 0.881796 CAGTAGAGATATCGCCGCCA 59.118 55.000 2.49 0.00 0.00 5.69
357 367 5.473846 TCCCACGTTCATCAGTAGAGATATC 59.526 44.000 0.00 0.00 0.00 1.63
358 368 5.386060 TCCCACGTTCATCAGTAGAGATAT 58.614 41.667 0.00 0.00 0.00 1.63
360 370 3.632333 TCCCACGTTCATCAGTAGAGAT 58.368 45.455 0.00 0.00 0.00 2.75
366 376 2.101582 GCTAGATCCCACGTTCATCAGT 59.898 50.000 0.00 0.00 0.00 3.41
367 377 2.101415 TGCTAGATCCCACGTTCATCAG 59.899 50.000 0.00 0.00 0.00 2.90
401 411 2.440409 CTCAACTGCACCCATTAGCTT 58.560 47.619 0.00 0.00 0.00 3.74
403 413 1.098050 CCTCAACTGCACCCATTAGC 58.902 55.000 0.00 0.00 0.00 3.09
417 428 5.118729 TCTTTGGTGTAAACCTTCCTCAA 57.881 39.130 3.10 0.00 0.00 3.02
432 443 5.243954 GGATAAAGCAAGGAGTTTCTTTGGT 59.756 40.000 0.57 0.57 44.29 3.67
444 455 4.517285 TGCTGTTCTAGGATAAAGCAAGG 58.483 43.478 4.08 0.00 37.69 3.61
446 457 4.517285 CCTGCTGTTCTAGGATAAAGCAA 58.483 43.478 7.26 0.00 39.92 3.91
447 458 3.118261 CCCTGCTGTTCTAGGATAAAGCA 60.118 47.826 6.02 6.02 38.27 3.91
448 459 3.471680 CCCTGCTGTTCTAGGATAAAGC 58.528 50.000 0.00 0.00 36.11 3.51
450 461 2.843730 TGCCCTGCTGTTCTAGGATAAA 59.156 45.455 0.00 0.00 36.11 1.40
451 462 2.477245 TGCCCTGCTGTTCTAGGATAA 58.523 47.619 0.00 0.00 36.11 1.75
453 464 1.142465 CATGCCCTGCTGTTCTAGGAT 59.858 52.381 0.00 0.00 36.11 3.24
454 465 0.543277 CATGCCCTGCTGTTCTAGGA 59.457 55.000 0.00 0.00 36.11 2.94
457 468 0.253044 GACCATGCCCTGCTGTTCTA 59.747 55.000 0.00 0.00 0.00 2.10
458 469 1.001641 GACCATGCCCTGCTGTTCT 60.002 57.895 0.00 0.00 0.00 3.01
459 470 1.303561 TGACCATGCCCTGCTGTTC 60.304 57.895 0.00 0.00 0.00 3.18
460 471 1.604593 GTGACCATGCCCTGCTGTT 60.605 57.895 0.00 0.00 0.00 3.16
461 472 2.034687 GTGACCATGCCCTGCTGT 59.965 61.111 0.00 0.00 0.00 4.40
462 473 0.968901 AATGTGACCATGCCCTGCTG 60.969 55.000 0.00 0.00 0.00 4.41
463 474 0.251922 AAATGTGACCATGCCCTGCT 60.252 50.000 0.00 0.00 0.00 4.24
464 475 1.473258 TAAATGTGACCATGCCCTGC 58.527 50.000 0.00 0.00 0.00 4.85
465 476 4.261741 GCTTATAAATGTGACCATGCCCTG 60.262 45.833 0.00 0.00 0.00 4.45
466 477 3.891366 GCTTATAAATGTGACCATGCCCT 59.109 43.478 0.00 0.00 0.00 5.19
467 478 3.304659 CGCTTATAAATGTGACCATGCCC 60.305 47.826 0.00 0.00 0.00 5.36
468 479 3.853307 GCGCTTATAAATGTGACCATGCC 60.853 47.826 0.00 0.00 0.00 4.40
469 480 3.243035 TGCGCTTATAAATGTGACCATGC 60.243 43.478 9.73 0.00 0.00 4.06
470 481 4.550577 TGCGCTTATAAATGTGACCATG 57.449 40.909 9.73 0.00 0.00 3.66
471 482 4.821260 TCATGCGCTTATAAATGTGACCAT 59.179 37.500 9.73 0.00 0.00 3.55
472 483 4.195416 TCATGCGCTTATAAATGTGACCA 58.805 39.130 9.73 0.00 0.00 4.02
473 484 4.811555 TCATGCGCTTATAAATGTGACC 57.188 40.909 9.73 0.00 0.00 4.02
474 485 7.504922 TTTTTCATGCGCTTATAAATGTGAC 57.495 32.000 9.73 0.00 0.00 3.67
475 486 7.972832 TGATTTTTCATGCGCTTATAAATGTGA 59.027 29.630 9.73 0.00 0.00 3.58
476 487 8.117758 TGATTTTTCATGCGCTTATAAATGTG 57.882 30.769 9.73 0.00 0.00 3.21
477 488 8.876275 ATGATTTTTCATGCGCTTATAAATGT 57.124 26.923 9.73 0.00 0.00 2.71
478 489 9.188588 AGATGATTTTTCATGCGCTTATAAATG 57.811 29.630 9.73 2.40 0.00 2.32
479 490 9.403110 GAGATGATTTTTCATGCGCTTATAAAT 57.597 29.630 9.73 8.25 0.00 1.40
501 512 8.153550 CCTTTTATGTAGGCATAGTGAAGAGAT 58.846 37.037 0.00 0.00 38.64 2.75
506 517 6.953101 TGTCCTTTTATGTAGGCATAGTGAA 58.047 36.000 0.00 0.00 38.64 3.18
509 520 6.263168 GCAATGTCCTTTTATGTAGGCATAGT 59.737 38.462 0.00 0.00 38.64 2.12
517 528 6.245408 AGGAGTTGCAATGTCCTTTTATGTA 58.755 36.000 21.89 0.00 37.42 2.29
531 545 2.076100 CATGTTAGCGAGGAGTTGCAA 58.924 47.619 0.00 0.00 35.18 4.08
535 549 3.511934 AGAAGACATGTTAGCGAGGAGTT 59.488 43.478 0.00 0.00 0.00 3.01
568 582 1.188863 AATTTCCTCCCTGTGCATGC 58.811 50.000 11.82 11.82 0.00 4.06
570 584 3.903090 TCAAAAATTTCCTCCCTGTGCAT 59.097 39.130 0.00 0.00 0.00 3.96
586 600 0.181587 TCGTGGAGGGTGCTCAAAAA 59.818 50.000 0.00 0.00 0.00 1.94
587 601 0.250295 CTCGTGGAGGGTGCTCAAAA 60.250 55.000 0.00 0.00 0.00 2.44
604 618 8.095169 TGTTCAACCTAAGATTAAGGTCTTCTC 58.905 37.037 0.00 0.00 46.85 2.87
615 629 9.023962 TGCTAAATTCATGTTCAACCTAAGATT 57.976 29.630 0.00 0.00 0.00 2.40
671 700 5.535030 CCTAAATTCATGTTAAGGGCTACCC 59.465 44.000 0.00 0.00 45.90 3.69
673 702 7.122204 ACAACCTAAATTCATGTTAAGGGCTAC 59.878 37.037 0.00 0.00 0.00 3.58
674 703 7.179269 ACAACCTAAATTCATGTTAAGGGCTA 58.821 34.615 0.00 0.00 0.00 3.93
676 705 6.280855 ACAACCTAAATTCATGTTAAGGGC 57.719 37.500 0.00 0.00 0.00 5.19
677 706 8.987890 CAAAACAACCTAAATTCATGTTAAGGG 58.012 33.333 0.00 0.00 33.39 3.95
678 707 9.541143 ACAAAACAACCTAAATTCATGTTAAGG 57.459 29.630 0.00 0.00 33.39 2.69
1194 1251 3.063084 GAGACGGAGAGCGGGTGT 61.063 66.667 0.00 0.00 0.00 4.16
1449 1506 0.028242 ACGCTAGATCTCGAGCAACG 59.972 55.000 15.97 7.94 43.45 4.10
1467 1524 4.153117 CCAGATCAACAGTTCAGCACTAAC 59.847 45.833 0.00 0.00 32.76 2.34
1540 1597 1.196581 TGATGATTTGAACACACCGCG 59.803 47.619 0.00 0.00 0.00 6.46
1583 1642 6.741992 TTGACCAGCAATGACTTATGTTAG 57.258 37.500 0.00 0.00 0.00 2.34
1606 1665 6.626623 GCCAGCTGTTGATCTTAACAATCAAT 60.627 38.462 13.81 0.00 43.10 2.57
1611 1670 3.754965 AGCCAGCTGTTGATCTTAACAA 58.245 40.909 13.81 0.00 39.81 2.83
1613 1672 6.094048 TGAATTAGCCAGCTGTTGATCTTAAC 59.906 38.462 13.81 0.00 0.00 2.01
1624 1683 3.887110 TGGATGAATGAATTAGCCAGCTG 59.113 43.478 6.78 6.78 0.00 4.24
1626 1685 5.010314 TGAATGGATGAATGAATTAGCCAGC 59.990 40.000 0.00 0.00 0.00 4.85
1627 1686 6.644248 TGAATGGATGAATGAATTAGCCAG 57.356 37.500 0.00 0.00 0.00 4.85
1628 1687 8.745590 CATATGAATGGATGAATGAATTAGCCA 58.254 33.333 0.00 0.00 0.00 4.75
1662 1721 7.452880 AGCAGCAAATATAGAAACAAAGTGA 57.547 32.000 0.00 0.00 0.00 3.41
1663 1722 7.809331 TCAAGCAGCAAATATAGAAACAAAGTG 59.191 33.333 0.00 0.00 0.00 3.16
1664 1723 7.885297 TCAAGCAGCAAATATAGAAACAAAGT 58.115 30.769 0.00 0.00 0.00 2.66
1677 1763 5.884232 TCTGATGATAACTCAAGCAGCAAAT 59.116 36.000 0.00 0.00 37.58 2.32
1684 1770 4.874966 AGCAAGTCTGATGATAACTCAAGC 59.125 41.667 0.00 0.00 34.37 4.01
1693 1779 6.260493 GCAGAAGAATTAGCAAGTCTGATGAT 59.740 38.462 2.77 0.00 35.76 2.45
1694 1780 5.583854 GCAGAAGAATTAGCAAGTCTGATGA 59.416 40.000 2.77 0.00 35.76 2.92
1715 1822 3.265791 GTCTAGAGAACCACCAATGCAG 58.734 50.000 0.00 0.00 0.00 4.41
1716 1823 2.637382 TGTCTAGAGAACCACCAATGCA 59.363 45.455 0.00 0.00 0.00 3.96
1740 1848 4.747108 AGTATATCACAAACTCGCATGAGC 59.253 41.667 0.00 0.00 46.69 4.26
1744 1852 6.515832 TCATGAGTATATCACAAACTCGCAT 58.484 36.000 0.00 0.00 41.91 4.73
1783 1891 7.767659 TCAATACGTTCTTCTAGAGTAGTAGCA 59.232 37.037 0.00 0.00 0.00 3.49
1784 1892 8.140677 TCAATACGTTCTTCTAGAGTAGTAGC 57.859 38.462 0.00 0.00 0.00 3.58
1786 1894 9.270640 GGATCAATACGTTCTTCTAGAGTAGTA 57.729 37.037 0.00 0.00 0.00 1.82
1787 1895 7.994334 AGGATCAATACGTTCTTCTAGAGTAGT 59.006 37.037 0.00 0.00 0.00 2.73
1788 1896 8.385898 AGGATCAATACGTTCTTCTAGAGTAG 57.614 38.462 0.00 0.00 0.00 2.57
1789 1897 8.749026 AAGGATCAATACGTTCTTCTAGAGTA 57.251 34.615 0.00 0.00 0.00 2.59
1826 1934 3.413327 TCAGTACCAGTGAGACAGAGTC 58.587 50.000 0.00 0.00 0.00 3.36
1881 1989 3.697542 CCAACTCCATGCATCATTCTTCA 59.302 43.478 0.00 0.00 0.00 3.02
1909 2017 9.005777 GTACAAAATCCCTGTACAGAACAATAA 57.994 33.333 24.68 1.81 45.57 1.40
1952 2060 0.250166 GGGGGCACGTTTATCGCTAT 60.250 55.000 0.00 0.00 44.19 2.97
1956 2064 0.812412 AATCGGGGGCACGTTTATCG 60.812 55.000 0.00 0.00 46.00 2.92
1971 2080 3.308053 ACGATCATCAAGCAACAGAATCG 59.692 43.478 0.00 0.00 0.00 3.34
1973 2082 4.093998 GTGACGATCATCAAGCAACAGAAT 59.906 41.667 0.00 0.00 0.00 2.40
1991 2100 8.623310 AACCAAAATAAAAACTAGTTGTGACG 57.377 30.769 9.34 0.00 0.00 4.35
2026 2218 3.620374 AGAGCACTTAAGCAACATCATCG 59.380 43.478 1.29 0.00 36.85 3.84
2061 2253 7.309133 CCTCCAAACTGCATTAAAGTGAACATA 60.309 37.037 0.00 0.00 0.00 2.29
2080 2272 2.303022 CAGACCAGTAGCTTCCTCCAAA 59.697 50.000 0.00 0.00 0.00 3.28
2268 2460 6.359804 TCAAATCAGTTCCCATATGAAGAGG 58.640 40.000 3.65 0.00 0.00 3.69
2299 2491 8.470002 CAGCCTTAAAGAATGCTAACCTAAAAT 58.530 33.333 0.00 0.00 34.66 1.82
2339 2531 9.671279 TCAGCTTTAACATAGAAATCAGAATCA 57.329 29.630 0.00 0.00 0.00 2.57
2423 2617 4.098914 TGTTGGTCAAAGCCACTAAGAT 57.901 40.909 0.00 0.00 38.42 2.40
2706 3027 3.284617 GGGTCGGGTTTTGCAGTATTAT 58.715 45.455 0.00 0.00 0.00 1.28
2722 3043 7.145932 AGAAAGAAAATTCACTTATGGGTCG 57.854 36.000 0.00 0.00 0.00 4.79
2736 3057 9.726438 ACTACTGTTATGCTGTAGAAAGAAAAT 57.274 29.630 16.90 0.00 46.29 1.82
2741 3062 6.631016 TGGACTACTGTTATGCTGTAGAAAG 58.369 40.000 16.90 1.58 46.29 2.62
2749 3071 6.372659 CAGTTTTGATGGACTACTGTTATGCT 59.627 38.462 0.00 0.00 33.34 3.79
2763 3085 8.964476 ACCATAAGACTATACAGTTTTGATGG 57.036 34.615 9.42 9.42 36.85 3.51
2777 3099 7.889073 ACAAGTACTTCTGAGACCATAAGACTA 59.111 37.037 4.77 0.00 32.66 2.59
2778 3100 6.722129 ACAAGTACTTCTGAGACCATAAGACT 59.278 38.462 4.77 0.00 32.66 3.24
2799 3121 7.793902 ACAACTATTACGAAGCTTAACACAAG 58.206 34.615 0.00 0.00 0.00 3.16
2810 3132 7.416154 TTGGTTTCAGACAACTATTACGAAG 57.584 36.000 0.00 0.00 0.00 3.79
2823 3145 6.930722 ACAATCCAATCATTTTGGTTTCAGAC 59.069 34.615 4.42 0.00 40.40 3.51
2866 3189 5.063564 GTGAAATAAGGATCACTGACGGAAC 59.936 44.000 0.00 0.00 42.07 3.62
2868 3191 4.755411 GTGAAATAAGGATCACTGACGGA 58.245 43.478 0.00 0.00 42.07 4.69
2884 3207 6.653020 TGCAGAGACACCATTATAGTGAAAT 58.347 36.000 0.00 0.00 38.63 2.17
2905 3229 3.081061 GAGGTGGTGTACAATCAATGCA 58.919 45.455 0.00 0.00 0.00 3.96
2911 3235 1.279271 AGCAGGAGGTGGTGTACAATC 59.721 52.381 0.00 0.00 34.82 2.67
2924 3248 9.761504 CATATATCCTATGATGTAAAGCAGGAG 57.238 37.037 0.00 0.00 35.73 3.69
2945 3269 4.583073 TGCGAGCTCCACTACTTTCATATA 59.417 41.667 8.47 0.00 0.00 0.86
2951 3275 1.406069 CCATGCGAGCTCCACTACTTT 60.406 52.381 8.47 0.00 0.00 2.66
2966 3290 1.972872 CCCACTAGACCAATCCATGC 58.027 55.000 0.00 0.00 0.00 4.06
3008 3332 3.184581 AGCGCTGAACGTAGAAAAAGAAG 59.815 43.478 10.39 0.00 46.11 2.85
3011 3335 2.475111 TCAGCGCTGAACGTAGAAAAAG 59.525 45.455 36.62 6.45 46.11 2.27
3020 3346 1.350193 ACAGTTATCAGCGCTGAACG 58.650 50.000 40.83 29.01 43.58 3.95
3079 3405 2.093447 CCATGTGAGTCCCACTACTTCC 60.093 54.545 0.00 0.00 45.86 3.46
3091 3417 5.011533 GCCTACTAGATCAATCCATGTGAGT 59.988 44.000 0.00 0.00 0.00 3.41
3097 3423 5.367937 AGTGTTGCCTACTAGATCAATCCAT 59.632 40.000 0.00 0.00 0.00 3.41
3118 3444 0.605319 TTAGGCCGTTCCAGCAAGTG 60.605 55.000 0.00 0.00 37.29 3.16
3120 3446 0.521735 GTTTAGGCCGTTCCAGCAAG 59.478 55.000 0.00 0.00 37.29 4.01
3127 3453 4.738252 CAGAAAAACAAGTTTAGGCCGTTC 59.262 41.667 0.00 0.00 31.63 3.95
3130 3456 4.301637 ACAGAAAAACAAGTTTAGGCCG 57.698 40.909 0.00 0.00 31.63 6.13
3139 3465 6.728200 TCAGCACTGAATACAGAAAAACAAG 58.272 36.000 0.00 0.00 46.03 3.16
3150 3476 9.109393 TCCAAAATAGTTATCAGCACTGAATAC 57.891 33.333 4.14 6.00 43.58 1.89
3152 3478 8.757982 ATCCAAAATAGTTATCAGCACTGAAT 57.242 30.769 4.14 0.00 43.58 2.57
3158 3484 6.194235 ACCCAATCCAAAATAGTTATCAGCA 58.806 36.000 0.00 0.00 0.00 4.41
3164 3490 9.275572 AGTACTAGACCCAATCCAAAATAGTTA 57.724 33.333 0.00 0.00 0.00 2.24
3165 3491 8.159229 AGTACTAGACCCAATCCAAAATAGTT 57.841 34.615 0.00 0.00 0.00 2.24
3169 3495 7.466804 TGAAAGTACTAGACCCAATCCAAAAT 58.533 34.615 0.00 0.00 0.00 1.82
3198 3524 7.451566 AGAACTTAACTAGGAAAAACCATGCAT 59.548 33.333 0.00 0.00 42.04 3.96
3204 3530 6.711194 AGCTCAGAACTTAACTAGGAAAAACC 59.289 38.462 0.00 0.00 39.35 3.27
3212 3539 6.151985 TCTCAGGAAGCTCAGAACTTAACTAG 59.848 42.308 0.00 0.00 0.00 2.57
3243 3570 2.223711 ACAATTGTTGGCTCCAAACGAC 60.224 45.455 4.92 0.00 37.70 4.34
3246 3573 1.866601 GCACAATTGTTGGCTCCAAAC 59.133 47.619 8.77 0.00 37.70 2.93
3291 3618 5.056480 TCAATACCTCATTCCATGCTAACG 58.944 41.667 0.00 0.00 0.00 3.18
3323 3650 9.154632 TCTGTATCCAGAAGCATTAACCTATTA 57.845 33.333 0.00 0.00 44.67 0.98
3348 4117 5.183904 AGCCAAACCAACTCTGAACATATTC 59.816 40.000 0.00 0.00 35.18 1.75
3352 4121 2.949447 AGCCAAACCAACTCTGAACAT 58.051 42.857 0.00 0.00 0.00 2.71
3390 4159 7.648142 CAGAACTTGACAAAATAAAGGTAGCA 58.352 34.615 0.00 0.00 0.00 3.49
3391 4160 6.582672 GCAGAACTTGACAAAATAAAGGTAGC 59.417 38.462 0.00 0.00 0.00 3.58
3423 4192 7.429633 ACAGAAGAGACAAGTATATTGGATCG 58.570 38.462 0.00 0.00 0.00 3.69
3585 4363 5.628193 CACTTGAAGAAGCATTGTCATTCAC 59.372 40.000 0.00 0.00 31.68 3.18
3592 4370 4.823989 AGCTAACACTTGAAGAAGCATTGT 59.176 37.500 0.00 0.00 31.68 2.71
3622 4400 9.926158 AAATTAATGCATGTCAATGTCAAAGTA 57.074 25.926 0.00 0.00 36.08 2.24
3623 4401 8.836268 AAATTAATGCATGTCAATGTCAAAGT 57.164 26.923 0.00 0.00 36.08 2.66
3624 4402 8.105742 CGAAATTAATGCATGTCAATGTCAAAG 58.894 33.333 0.00 0.00 36.08 2.77
3625 4403 7.063191 CCGAAATTAATGCATGTCAATGTCAAA 59.937 33.333 0.00 0.00 36.08 2.69
3626 4404 6.530887 CCGAAATTAATGCATGTCAATGTCAA 59.469 34.615 0.00 0.00 36.08 3.18
3627 4405 6.035217 CCGAAATTAATGCATGTCAATGTCA 58.965 36.000 0.00 0.00 36.08 3.58
3629 4407 6.206395 TCCGAAATTAATGCATGTCAATGT 57.794 33.333 0.00 0.00 36.08 2.71
3631 4409 8.721019 ATTTTCCGAAATTAATGCATGTCAAT 57.279 26.923 0.00 0.00 31.48 2.57
3633 4411 9.645059 TTTATTTTCCGAAATTAATGCATGTCA 57.355 25.926 0.00 0.00 36.82 3.58
3635 4413 8.603181 GCTTTATTTTCCGAAATTAATGCATGT 58.397 29.630 24.29 0.00 37.34 3.21
3636 4414 8.819974 AGCTTTATTTTCCGAAATTAATGCATG 58.180 29.630 27.27 0.00 38.48 4.06
3637 4415 8.947055 AGCTTTATTTTCCGAAATTAATGCAT 57.053 26.923 27.27 18.35 38.48 3.96
3638 4416 8.770438 AAGCTTTATTTTCCGAAATTAATGCA 57.230 26.923 27.27 0.00 38.48 3.96
3678 4456 6.602009 ACTGATTAGGCAATAAGGTTTGTACC 59.398 38.462 0.00 0.00 45.39 3.34
3713 4491 0.250553 TTTGCCCGACACCACTTAGG 60.251 55.000 0.00 0.00 45.67 2.69
3729 4507 6.238049 CGAGAGGAGATCATTAGCAAACTTTG 60.238 42.308 0.00 0.00 0.00 2.77
3804 4582 1.064906 ACATGTCCAAGCTAGCAGCAT 60.065 47.619 18.83 10.13 45.56 3.79
3809 4587 5.760253 ACATTACATACATGTCCAAGCTAGC 59.240 40.000 6.62 6.62 41.97 3.42
3833 4611 6.238842 CGATACATAACTAACTTTCTCCCGGA 60.239 42.308 0.73 0.00 0.00 5.14
3935 4839 4.860072 AGTTTTGGATGCTCGAAAAGTTC 58.140 39.130 6.41 0.00 35.24 3.01
3940 4844 9.778741 AGATATTATAGTTTTGGATGCTCGAAA 57.221 29.630 0.00 0.00 0.00 3.46
3941 4845 9.424319 GAGATATTATAGTTTTGGATGCTCGAA 57.576 33.333 0.00 0.00 0.00 3.71
3942 4846 8.807118 AGAGATATTATAGTTTTGGATGCTCGA 58.193 33.333 0.00 0.00 0.00 4.04
3943 4847 8.994429 AGAGATATTATAGTTTTGGATGCTCG 57.006 34.615 0.00 0.00 0.00 5.03
3949 4853 9.988815 GCAGAAGAGAGATATTATAGTTTTGGA 57.011 33.333 0.00 0.00 0.00 3.53
3950 4854 9.213799 GGCAGAAGAGAGATATTATAGTTTTGG 57.786 37.037 0.00 0.00 0.00 3.28
3951 4855 8.920665 CGGCAGAAGAGAGATATTATAGTTTTG 58.079 37.037 0.00 0.00 0.00 2.44
3952 4856 7.600752 GCGGCAGAAGAGAGATATTATAGTTTT 59.399 37.037 0.00 0.00 0.00 2.43
3953 4857 7.093992 GCGGCAGAAGAGAGATATTATAGTTT 58.906 38.462 0.00 0.00 0.00 2.66
3954 4858 6.350612 GGCGGCAGAAGAGAGATATTATAGTT 60.351 42.308 3.07 0.00 0.00 2.24
3955 4859 5.126384 GGCGGCAGAAGAGAGATATTATAGT 59.874 44.000 3.07 0.00 0.00 2.12
3956 4860 5.451242 GGGCGGCAGAAGAGAGATATTATAG 60.451 48.000 12.47 0.00 0.00 1.31
3957 4861 4.402793 GGGCGGCAGAAGAGAGATATTATA 59.597 45.833 12.47 0.00 0.00 0.98
3958 4862 3.196685 GGGCGGCAGAAGAGAGATATTAT 59.803 47.826 12.47 0.00 0.00 1.28
3959 4863 2.563179 GGGCGGCAGAAGAGAGATATTA 59.437 50.000 12.47 0.00 0.00 0.98
3960 4864 1.346068 GGGCGGCAGAAGAGAGATATT 59.654 52.381 12.47 0.00 0.00 1.28
3961 4865 0.972883 GGGCGGCAGAAGAGAGATAT 59.027 55.000 12.47 0.00 0.00 1.63
3962 4866 0.397114 TGGGCGGCAGAAGAGAGATA 60.397 55.000 12.47 0.00 0.00 1.98
3963 4867 1.053264 ATGGGCGGCAGAAGAGAGAT 61.053 55.000 12.47 0.00 0.00 2.75
3964 4868 0.397114 TATGGGCGGCAGAAGAGAGA 60.397 55.000 12.47 0.00 0.00 3.10
3965 4869 0.683973 ATATGGGCGGCAGAAGAGAG 59.316 55.000 12.47 0.00 0.00 3.20
3966 4870 0.681733 GATATGGGCGGCAGAAGAGA 59.318 55.000 12.47 0.00 0.00 3.10
3967 4871 0.683973 AGATATGGGCGGCAGAAGAG 59.316 55.000 12.47 0.00 0.00 2.85
3968 4872 0.394192 CAGATATGGGCGGCAGAAGA 59.606 55.000 12.47 0.00 0.00 2.87
3969 4873 0.107456 ACAGATATGGGCGGCAGAAG 59.893 55.000 12.47 0.00 0.00 2.85
3979 4900 8.478877 AGTTTCACTCCTTAACTACAGATATGG 58.521 37.037 0.00 0.00 30.75 2.74
4105 5035 4.299586 TAGGAACTCATGGCACAATTCA 57.700 40.909 0.00 0.00 41.72 2.57
4451 5409 6.224584 TGTGGTATCGTGTTTGATACTTTGA 58.775 36.000 12.18 0.00 46.41 2.69
4452 5410 6.474819 TGTGGTATCGTGTTTGATACTTTG 57.525 37.500 12.18 0.00 46.41 2.77
4453 5411 7.279313 GGTATGTGGTATCGTGTTTGATACTTT 59.721 37.037 12.18 1.10 46.41 2.66
4454 5412 6.759827 GGTATGTGGTATCGTGTTTGATACTT 59.240 38.462 12.18 1.36 46.41 2.24
4455 5413 6.127281 TGGTATGTGGTATCGTGTTTGATACT 60.127 38.462 12.18 0.00 46.41 2.12
4456 5414 6.044046 TGGTATGTGGTATCGTGTTTGATAC 58.956 40.000 5.54 5.54 46.45 2.24
4457 5415 6.127281 ACTGGTATGTGGTATCGTGTTTGATA 60.127 38.462 0.00 0.00 0.00 2.15
4458 5416 5.092554 TGGTATGTGGTATCGTGTTTGAT 57.907 39.130 0.00 0.00 0.00 2.57
4495 5453 6.539173 TGTTATTCTAAACCCTGAGCAAAGA 58.461 36.000 0.00 0.00 0.00 2.52
4522 5480 1.536766 CATGACTGCATCCACGTTTGT 59.463 47.619 0.00 0.00 30.68 2.83
4544 5502 7.881775 AAGGGATTCACCAAGTACATAATTC 57.118 36.000 0.00 0.00 41.20 2.17
4570 5529 8.918202 TGTTCTTGTTATTCTAAACCATGAGT 57.082 30.769 0.00 0.00 0.00 3.41
4599 5558 5.125100 ACCAACTACACATTTTGCATCAG 57.875 39.130 0.00 0.00 0.00 2.90
4645 5606 6.062095 CCGGTCCTTTTGTCCAGATATTATT 58.938 40.000 0.00 0.00 0.00 1.40
4648 5609 3.886123 CCGGTCCTTTTGTCCAGATATT 58.114 45.455 0.00 0.00 0.00 1.28
4694 5655 6.602803 TGTCAGAGCAATATTTTAATCCTGCA 59.397 34.615 9.84 0.00 31.85 4.41
4738 5699 2.467880 TCGGCCTTTTATCCTGACTCT 58.532 47.619 0.00 0.00 0.00 3.24
4861 6149 9.546428 ACCGTATGTTTTATATACCACTAAACC 57.454 33.333 5.09 0.00 0.00 3.27
5312 6609 1.003545 CACTCAAGTTGTGAAGTGCCG 60.004 52.381 11.73 0.00 37.60 5.69
5474 6772 3.703556 TCCCAAGCAGTCAATTTCAAACA 59.296 39.130 0.00 0.00 0.00 2.83
5495 6793 7.096599 GGACTGAAAAATGTTTTAAGCTCGTTC 60.097 37.037 0.00 0.00 0.00 3.95
5601 6900 3.836146 CATGAGGGAATCTGGCCATAAA 58.164 45.455 5.51 0.00 0.00 1.40
5628 6927 4.184629 ACTTTCACTCTTCGACATATGCC 58.815 43.478 1.58 0.00 0.00 4.40
5636 6935 6.208007 TGTCAGGTATAACTTTCACTCTTCGA 59.792 38.462 0.00 0.00 0.00 3.71
5638 6937 7.278868 CCATGTCAGGTATAACTTTCACTCTTC 59.721 40.741 0.00 0.00 0.00 2.87
5642 6941 6.620877 TCCATGTCAGGTATAACTTTCACT 57.379 37.500 0.00 0.00 0.00 3.41
5703 7002 3.262420 GAAGTTCACGTAGCCACATCAT 58.738 45.455 0.00 0.00 0.00 2.45
5715 7014 2.943033 ACACAGGAAAAGGAAGTTCACG 59.057 45.455 5.01 0.00 0.00 4.35
5765 7064 9.790389 TTATTAACCTTAACATAACAATTGCGG 57.210 29.630 5.05 0.00 0.00 5.69
5781 7080 8.440771 CCATAGGTCTTGAGGATTATTAACCTT 58.559 37.037 0.00 0.00 37.15 3.50
5806 7105 8.897872 TTTCCTTGATTCGAATATAACCTACC 57.102 34.615 11.38 0.00 0.00 3.18
5817 7116 6.633500 AACTGTCAATTTCCTTGATTCGAA 57.367 33.333 0.00 0.00 45.36 3.71
6024 7335 0.365523 CGTGGTTGACGTTCATAGCG 59.634 55.000 0.00 0.00 43.50 4.26
6134 7445 2.680339 GGCTGAAGATACAAACTGGAGC 59.320 50.000 0.00 0.00 0.00 4.70
6144 7455 2.094182 TGGTGAAGTCGGCTGAAGATAC 60.094 50.000 0.00 0.00 0.00 2.24
6161 7472 1.670406 AAGCGCTTCTGCTCTGGTG 60.670 57.895 18.98 0.00 46.60 4.17
6196 7507 3.620488 GGGCAGATAAAATGTGACTGGA 58.380 45.455 0.00 0.00 31.04 3.86
6197 7508 2.689983 GGGGCAGATAAAATGTGACTGG 59.310 50.000 0.00 0.00 31.04 4.00
6248 7572 3.074412 ACAAGCAGATAGAAACCCGTTG 58.926 45.455 0.00 0.00 0.00 4.10
6351 7675 3.896133 GTCCATGCATGCCGCCTG 61.896 66.667 21.69 6.60 41.33 4.85
6352 7676 4.429522 TGTCCATGCATGCCGCCT 62.430 61.111 21.69 0.00 41.33 5.52
6353 7677 4.197498 GTGTCCATGCATGCCGCC 62.197 66.667 21.69 8.45 41.33 6.13
6355 7679 2.767445 CCAGTGTCCATGCATGCCG 61.767 63.158 21.69 8.89 0.00 5.69
6356 7680 1.378911 TCCAGTGTCCATGCATGCC 60.379 57.895 21.69 13.70 0.00 4.40
6370 7735 4.415150 ACATGCCGCCTGGTCCAG 62.415 66.667 12.40 12.40 37.67 3.86
6387 7752 2.065512 CGACCGTTTGTGTCATCATGA 58.934 47.619 0.00 0.00 32.91 3.07
6436 7801 2.140065 TCGGATCGAATCAGATGTGC 57.860 50.000 0.00 0.00 31.06 4.57
6452 7817 2.093306 TTGTGCTACCTGATGTTCGG 57.907 50.000 0.00 0.00 0.00 4.30
6456 7821 3.379372 GCAATGATTGTGCTACCTGATGT 59.621 43.478 7.05 0.00 39.00 3.06
6459 7829 2.368439 GGCAATGATTGTGCTACCTGA 58.632 47.619 7.05 0.00 41.88 3.86
6467 7837 2.133553 TGCAAAACGGCAATGATTGTG 58.866 42.857 7.05 2.76 41.65 3.33
6492 7875 1.301401 GTCAGCGTGCTTGGTGGTA 60.301 57.895 7.85 0.00 37.91 3.25
6495 7878 2.661537 TCGTCAGCGTGCTTGGTG 60.662 61.111 0.00 2.14 39.49 4.17
6496 7879 2.356313 CTCGTCAGCGTGCTTGGT 60.356 61.111 0.00 0.00 39.49 3.67
6497 7880 3.114616 CCTCGTCAGCGTGCTTGG 61.115 66.667 0.00 0.00 39.49 3.61
6498 7881 1.664649 TTCCTCGTCAGCGTGCTTG 60.665 57.895 0.00 0.00 39.49 4.01
6499 7882 1.664965 GTTCCTCGTCAGCGTGCTT 60.665 57.895 0.00 0.00 39.49 3.91
6500 7883 2.049063 GTTCCTCGTCAGCGTGCT 60.049 61.111 0.00 0.00 39.49 4.40
6501 7884 3.112709 GGTTCCTCGTCAGCGTGC 61.113 66.667 0.00 0.00 39.49 5.34
6502 7885 1.592400 TAGGGTTCCTCGTCAGCGTG 61.592 60.000 0.00 0.00 39.49 5.34
6503 7886 1.303888 TAGGGTTCCTCGTCAGCGT 60.304 57.895 0.00 0.00 39.49 5.07
6504 7887 1.139095 GTAGGGTTCCTCGTCAGCG 59.861 63.158 0.00 0.00 34.61 5.18
6505 7888 1.516423 GGTAGGGTTCCTCGTCAGC 59.484 63.158 0.00 0.00 34.61 4.26
6506 7889 1.807886 CGGTAGGGTTCCTCGTCAG 59.192 63.158 0.00 0.00 34.61 3.51
6534 7917 3.660111 GTGGTGTGGCGCCTGAAC 61.660 66.667 29.70 21.51 34.70 3.18
6607 7991 2.668550 ACCAAAACCTCCTCGCGC 60.669 61.111 0.00 0.00 0.00 6.86
6640 8046 6.601613 TGCTACCCAATTCAATTTGTACCTAG 59.398 38.462 0.00 0.00 0.00 3.02
6688 8103 4.436242 TTTCTAGTCTAGCACCGTCTTG 57.564 45.455 1.60 0.00 0.00 3.02
6699 8114 9.429359 CAAAAGAAAGAGCTGATTTCTAGTCTA 57.571 33.333 18.98 0.00 44.25 2.59
6701 8116 8.093659 ACAAAAGAAAGAGCTGATTTCTAGTC 57.906 34.615 18.98 1.22 44.25 2.59
6702 8117 7.716998 TGACAAAAGAAAGAGCTGATTTCTAGT 59.283 33.333 18.98 17.20 44.25 2.57
6722 8137 3.820467 AGCAATCCAGATCGTTTGACAAA 59.180 39.130 0.00 0.00 0.00 2.83
6755 8171 1.948145 GGATGGCATCTCAGCTTGAAG 59.052 52.381 25.48 0.00 34.17 3.02
6758 8174 1.595466 GAGGATGGCATCTCAGCTTG 58.405 55.000 25.48 0.00 34.17 4.01
6759 8175 0.106335 CGAGGATGGCATCTCAGCTT 59.894 55.000 25.48 6.22 34.17 3.74
6760 8176 0.758310 TCGAGGATGGCATCTCAGCT 60.758 55.000 25.48 14.68 34.17 4.24
6830 8250 4.568804 CCCATTCTATACCACCACCAACAA 60.569 45.833 0.00 0.00 0.00 2.83
6841 8261 5.045505 GGATCCTTCCTTCCCATTCTATACC 60.046 48.000 3.84 0.00 39.14 2.73
6870 8290 0.873054 CCATCATCATCCTTGCGAGC 59.127 55.000 0.00 0.00 0.00 5.03
6903 8323 1.853963 GAGACCCCAGAGACAGCTAA 58.146 55.000 0.00 0.00 0.00 3.09
6913 8333 2.266055 GGAGTTGCGAGACCCCAG 59.734 66.667 0.00 0.00 0.00 4.45
6919 8342 1.863662 GAGTCCGTGGAGTTGCGAGA 61.864 60.000 0.00 0.00 0.00 4.04
6922 8345 2.432628 GGAGTCCGTGGAGTTGCG 60.433 66.667 0.00 0.00 0.00 4.85
6927 8350 1.079543 CAAGCTGGAGTCCGTGGAG 60.080 63.158 4.30 0.00 0.00 3.86
6944 8367 1.338769 GCGGACTAGGCTTTTCTTCCA 60.339 52.381 0.00 0.00 0.00 3.53
7010 8433 2.607635 TCGAATCGGCTTCAATACAAGC 59.392 45.455 1.76 0.00 46.99 4.01
7019 8442 0.179156 TACCACGTCGAATCGGCTTC 60.179 55.000 5.52 0.00 34.94 3.86
7085 8522 1.202486 CGTTAGGCGAGGCAGGATAAA 60.202 52.381 0.00 0.00 44.77 1.40
7138 8584 5.588958 AAGCCTTTTGGATGATCTAAAGC 57.411 39.130 4.20 5.87 44.07 3.51
7140 8586 6.620678 CGAAAAGCCTTTTGGATGATCTAAA 58.379 36.000 7.25 0.00 44.07 1.85
7164 8611 5.387752 CGTTTTACTAGTACTGAAACACGGC 60.388 44.000 20.63 3.00 32.14 5.68
7220 8974 1.387084 GAACGACAACAGCTCGATGAC 59.613 52.381 0.00 0.00 35.08 3.06
7236 8990 1.079543 AGGCTGCTAGCAGTGAACG 60.080 57.895 37.91 18.94 44.75 3.95
7237 8991 0.248843 AGAGGCTGCTAGCAGTGAAC 59.751 55.000 37.91 26.78 44.75 3.18
7338 9093 4.121317 CGGGACTACAGACTAGTCTACTG 58.879 52.174 24.75 15.97 42.54 2.74
7339 9094 3.774216 ACGGGACTACAGACTAGTCTACT 59.226 47.826 24.75 14.98 42.54 2.57
7340 9095 4.119136 GACGGGACTACAGACTAGTCTAC 58.881 52.174 24.75 13.12 42.54 2.59
7343 9098 2.287769 GGACGGGACTACAGACTAGTC 58.712 57.143 15.41 15.41 42.28 2.59
7344 9099 1.064832 GGGACGGGACTACAGACTAGT 60.065 57.143 0.00 0.00 0.00 2.57
7345 9100 1.677942 GGGACGGGACTACAGACTAG 58.322 60.000 0.00 0.00 0.00 2.57
7346 9101 3.890527 GGGACGGGACTACAGACTA 57.109 57.895 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.