Multiple sequence alignment - TraesCS7B01G012800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G012800 chr7B 100.000 2507 0 0 1 2507 8918597 8916091 0.000000e+00 4630.0
1 TraesCS7B01G012800 chr7B 73.898 295 65 9 363 649 126560314 126560024 9.480000e-20 108.0
2 TraesCS7B01G012800 chr7D 93.296 895 44 7 828 1722 66818595 66817717 0.000000e+00 1306.0
3 TraesCS7B01G012800 chr7D 91.803 183 15 0 1851 2033 66817720 66817538 3.200000e-64 255.0
4 TraesCS7B01G012800 chr7D 78.571 392 71 12 132 519 475154878 475155260 1.930000e-61 246.0
5 TraesCS7B01G012800 chr7D 87.288 118 11 3 1924 2039 454079077 454079192 5.630000e-27 132.0
6 TraesCS7B01G012800 chr7D 85.124 121 14 4 1911 2028 614250174 614250293 1.220000e-23 121.0
7 TraesCS7B01G012800 chr7A 93.402 682 44 1 1043 1724 74132182 74132862 0.000000e+00 1009.0
8 TraesCS7B01G012800 chr7A 98.413 252 4 0 2031 2282 460546171 460545920 6.360000e-121 444.0
9 TraesCS7B01G012800 chr7A 98.406 251 4 0 2032 2282 649395225 649395475 2.290000e-120 442.0
10 TraesCS7B01G012800 chr7A 98.008 251 5 0 2032 2282 485324947 485324697 1.060000e-118 436.0
11 TraesCS7B01G012800 chr7A 99.134 231 2 0 2277 2507 460545883 460545653 1.390000e-112 416.0
12 TraesCS7B01G012800 chr7A 99.134 231 2 0 2277 2507 706453383 706453613 1.390000e-112 416.0
13 TraesCS7B01G012800 chr7A 93.605 172 11 0 1862 2033 74132908 74133079 8.900000e-65 257.0
14 TraesCS7B01G012800 chr7A 78.385 384 71 11 140 519 10359241 10359616 3.220000e-59 239.0
15 TraesCS7B01G012800 chr7A 80.934 257 39 9 398 648 549712359 549712611 7.080000e-46 195.0
16 TraesCS7B01G012800 chr7A 84.000 125 17 3 1904 2025 706284934 706285058 1.580000e-22 117.0
17 TraesCS7B01G012800 chr7A 94.000 50 2 1 1851 1899 74132857 74132906 9.620000e-10 75.0
18 TraesCS7B01G012800 chr5A 94.363 479 21 4 2033 2507 526381870 526382346 0.000000e+00 730.0
19 TraesCS7B01G012800 chr5A 76.836 177 26 9 452 614 569680118 569679943 4.440000e-13 86.1
20 TraesCS7B01G012800 chr3A 98.406 251 4 0 2032 2282 171241740 171241490 2.290000e-120 442.0
21 TraesCS7B01G012800 chr3A 89.855 138 13 1 1719 1856 654591967 654592103 2.560000e-40 176.0
22 TraesCS7B01G012800 chr3A 87.850 107 13 0 1922 2028 509865407 509865301 2.620000e-25 126.0
23 TraesCS7B01G012800 chr1A 98.031 254 5 0 2029 2282 119732798 119733051 2.290000e-120 442.0
24 TraesCS7B01G012800 chr1A 99.134 231 2 0 2277 2507 119733088 119733318 1.390000e-112 416.0
25 TraesCS7B01G012800 chr1B 98.008 251 5 0 2032 2282 446626181 446625931 1.060000e-118 436.0
26 TraesCS7B01G012800 chr3B 98.000 250 5 0 2033 2282 787191336 787191585 3.830000e-118 435.0
27 TraesCS7B01G012800 chr3B 99.134 231 2 0 2277 2507 545641787 545642017 1.390000e-112 416.0
28 TraesCS7B01G012800 chr3B 99.134 231 2 0 2277 2507 816597035 816597265 1.390000e-112 416.0
29 TraesCS7B01G012800 chr4A 97.255 255 4 2 2028 2282 436874018 436873767 1.780000e-116 429.0
30 TraesCS7B01G012800 chr4A 99.134 231 2 0 2277 2507 629946369 629946599 1.390000e-112 416.0
31 TraesCS7B01G012800 chr6B 99.134 231 2 0 2277 2507 292239653 292239883 1.390000e-112 416.0
32 TraesCS7B01G012800 chr6A 99.134 231 2 0 2277 2507 409792350 409792580 1.390000e-112 416.0
33 TraesCS7B01G012800 chr4B 78.244 524 89 19 135 642 500108660 500109174 1.870000e-81 313.0
34 TraesCS7B01G012800 chr4B 88.571 105 12 0 1924 2028 438375181 438375285 7.280000e-26 128.0
35 TraesCS7B01G012800 chr4B 88.571 105 12 0 1924 2028 544041903 544041799 7.280000e-26 128.0
36 TraesCS7B01G012800 chr3D 77.922 462 80 15 132 579 24569191 24569644 4.110000e-68 268.0
37 TraesCS7B01G012800 chr3D 85.470 117 16 1 1923 2039 548706794 548706909 1.220000e-23 121.0
38 TraesCS7B01G012800 chr2B 79.688 384 66 11 140 519 795074694 795075069 1.480000e-67 267.0
39 TraesCS7B01G012800 chr2B 79.082 392 68 12 133 519 134253207 134253589 8.900000e-65 257.0
40 TraesCS7B01G012800 chr5B 76.311 553 83 32 133 666 17312202 17311679 4.140000e-63 252.0
41 TraesCS7B01G012800 chr5B 76.111 540 82 31 133 653 16999889 16999378 3.220000e-59 239.0
42 TraesCS7B01G012800 chr1D 78.481 395 74 10 134 525 290704941 290704555 5.350000e-62 248.0
43 TraesCS7B01G012800 chr5D 78.756 386 68 12 138 519 249996954 249997329 1.930000e-61 246.0
44 TraesCS7B01G012800 chr6D 78.030 396 74 12 134 525 454064657 454064271 1.160000e-58 237.0
45 TraesCS7B01G012800 chr4D 78.979 333 55 10 314 635 54608040 54608368 1.950000e-51 213.0
46 TraesCS7B01G012800 chr4D 75.187 536 89 29 135 654 97374423 97374930 1.950000e-51 213.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G012800 chr7B 8916091 8918597 2506 True 4630.0 4630 100.0000 1 2507 1 chr7B.!!$R1 2506
1 TraesCS7B01G012800 chr7D 66817538 66818595 1057 True 780.5 1306 92.5495 828 2033 2 chr7D.!!$R1 1205
2 TraesCS7B01G012800 chr7A 74132182 74133079 897 False 447.0 1009 93.6690 1043 2033 3 chr7A.!!$F6 990
3 TraesCS7B01G012800 chr7A 460545653 460546171 518 True 430.0 444 98.7735 2031 2507 2 chr7A.!!$R2 476
4 TraesCS7B01G012800 chr1A 119732798 119733318 520 False 429.0 442 98.5825 2029 2507 2 chr1A.!!$F1 478
5 TraesCS7B01G012800 chr4B 500108660 500109174 514 False 313.0 313 78.2440 135 642 1 chr4B.!!$F2 507
6 TraesCS7B01G012800 chr5B 17311679 17312202 523 True 252.0 252 76.3110 133 666 1 chr5B.!!$R2 533
7 TraesCS7B01G012800 chr5B 16999378 16999889 511 True 239.0 239 76.1110 133 653 1 chr5B.!!$R1 520
8 TraesCS7B01G012800 chr4D 97374423 97374930 507 False 213.0 213 75.1870 135 654 1 chr4D.!!$F2 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
54 55 0.037447 GCCTCCTCTCCACAAAAGCT 59.963 55.0 0.0 0.0 0.0 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1835 1849 0.177373 CTAAGGCCCTGTTCGGTACC 59.823 60.0 0.16 0.16 0.0 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.678336 GCACATGTTAGTTGTAGCCTCC 59.322 50.000 0.00 0.00 0.00 4.30
22 23 3.868369 GCACATGTTAGTTGTAGCCTCCA 60.868 47.826 0.00 0.00 0.00 3.86
23 24 3.684788 CACATGTTAGTTGTAGCCTCCAC 59.315 47.826 0.00 0.00 0.00 4.02
24 25 3.326588 ACATGTTAGTTGTAGCCTCCACA 59.673 43.478 0.00 0.00 0.00 4.17
25 26 4.019321 ACATGTTAGTTGTAGCCTCCACAT 60.019 41.667 0.00 0.00 0.00 3.21
26 27 3.937814 TGTTAGTTGTAGCCTCCACATG 58.062 45.455 0.00 0.00 0.00 3.21
27 28 3.326588 TGTTAGTTGTAGCCTCCACATGT 59.673 43.478 0.00 0.00 0.00 3.21
28 29 4.528987 TGTTAGTTGTAGCCTCCACATGTA 59.471 41.667 0.00 0.00 0.00 2.29
29 30 3.895232 AGTTGTAGCCTCCACATGTAG 57.105 47.619 0.00 0.00 0.00 2.74
30 31 2.093447 AGTTGTAGCCTCCACATGTAGC 60.093 50.000 0.00 0.00 0.00 3.58
31 32 0.459899 TGTAGCCTCCACATGTAGCG 59.540 55.000 0.00 0.00 0.00 4.26
32 33 0.249489 GTAGCCTCCACATGTAGCGG 60.249 60.000 0.00 0.00 0.00 5.52
33 34 2.028125 TAGCCTCCACATGTAGCGGC 62.028 60.000 16.34 16.34 37.80 6.53
34 35 2.903357 CCTCCACATGTAGCGGCT 59.097 61.111 7.98 7.98 0.00 5.52
35 36 1.522355 CCTCCACATGTAGCGGCTG 60.522 63.158 13.86 0.00 0.00 4.85
36 37 2.125147 TCCACATGTAGCGGCTGC 60.125 61.111 13.86 10.33 43.24 5.25
37 38 3.204827 CCACATGTAGCGGCTGCC 61.205 66.667 15.55 9.11 44.31 4.85
38 39 2.124983 CACATGTAGCGGCTGCCT 60.125 61.111 15.55 0.54 44.31 4.75
39 40 2.176273 CACATGTAGCGGCTGCCTC 61.176 63.158 15.55 9.19 44.31 4.70
40 41 2.590007 CATGTAGCGGCTGCCTCC 60.590 66.667 15.55 7.61 44.31 4.30
41 42 2.765807 ATGTAGCGGCTGCCTCCT 60.766 61.111 15.55 14.71 44.31 3.69
42 43 2.801631 ATGTAGCGGCTGCCTCCTC 61.802 63.158 15.55 5.48 44.31 3.71
43 44 3.151022 GTAGCGGCTGCCTCCTCT 61.151 66.667 15.55 10.47 44.31 3.69
44 45 2.835431 TAGCGGCTGCCTCCTCTC 60.835 66.667 15.55 0.00 44.31 3.20
47 48 4.154347 CGGCTGCCTCCTCTCCAC 62.154 72.222 17.92 0.00 0.00 4.02
48 49 3.005539 GGCTGCCTCCTCTCCACA 61.006 66.667 12.43 0.00 0.00 4.17
49 50 2.596851 GGCTGCCTCCTCTCCACAA 61.597 63.158 12.43 0.00 0.00 3.33
50 51 1.376466 GCTGCCTCCTCTCCACAAA 59.624 57.895 0.00 0.00 0.00 2.83
51 52 0.250901 GCTGCCTCCTCTCCACAAAA 60.251 55.000 0.00 0.00 0.00 2.44
52 53 1.818642 CTGCCTCCTCTCCACAAAAG 58.181 55.000 0.00 0.00 0.00 2.27
53 54 0.250901 TGCCTCCTCTCCACAAAAGC 60.251 55.000 0.00 0.00 0.00 3.51
54 55 0.037447 GCCTCCTCTCCACAAAAGCT 59.963 55.000 0.00 0.00 0.00 3.74
55 56 1.546548 GCCTCCTCTCCACAAAAGCTT 60.547 52.381 0.00 0.00 0.00 3.74
56 57 2.290323 GCCTCCTCTCCACAAAAGCTTA 60.290 50.000 0.00 0.00 0.00 3.09
57 58 3.604582 CCTCCTCTCCACAAAAGCTTAG 58.395 50.000 0.00 0.00 0.00 2.18
58 59 3.604582 CTCCTCTCCACAAAAGCTTAGG 58.395 50.000 0.00 0.00 0.00 2.69
59 60 2.305927 TCCTCTCCACAAAAGCTTAGGG 59.694 50.000 0.00 0.00 0.00 3.53
60 61 2.040412 CCTCTCCACAAAAGCTTAGGGT 59.960 50.000 0.00 0.00 0.00 4.34
61 62 3.498661 CCTCTCCACAAAAGCTTAGGGTT 60.499 47.826 0.00 0.00 34.34 4.11
62 63 3.751518 TCTCCACAAAAGCTTAGGGTTC 58.248 45.455 0.00 0.00 32.26 3.62
63 64 2.820197 CTCCACAAAAGCTTAGGGTTCC 59.180 50.000 0.00 0.00 32.26 3.62
64 65 2.445525 TCCACAAAAGCTTAGGGTTCCT 59.554 45.455 0.00 0.00 37.71 3.36
65 66 2.820197 CCACAAAAGCTTAGGGTTCCTC 59.180 50.000 0.00 0.00 34.61 3.71
66 67 2.820197 CACAAAAGCTTAGGGTTCCTCC 59.180 50.000 0.00 0.00 34.61 4.30
67 68 2.445525 ACAAAAGCTTAGGGTTCCTCCA 59.554 45.455 0.00 0.00 38.11 3.86
68 69 2.820197 CAAAAGCTTAGGGTTCCTCCAC 59.180 50.000 0.00 0.00 38.11 4.02
69 70 0.992695 AAGCTTAGGGTTCCTCCACC 59.007 55.000 0.00 0.00 38.11 4.61
70 71 0.119358 AGCTTAGGGTTCCTCCACCT 59.881 55.000 0.00 0.00 36.97 4.00
71 72 0.992695 GCTTAGGGTTCCTCCACCTT 59.007 55.000 0.00 0.00 36.97 3.50
72 73 1.065345 GCTTAGGGTTCCTCCACCTTC 60.065 57.143 0.00 0.00 36.97 3.46
73 74 1.560146 CTTAGGGTTCCTCCACCTTCC 59.440 57.143 0.00 0.00 36.97 3.46
74 75 0.494551 TAGGGTTCCTCCACCTTCCA 59.505 55.000 0.00 0.00 36.97 3.53
75 76 0.178831 AGGGTTCCTCCACCTTCCAT 60.179 55.000 0.00 0.00 36.97 3.41
76 77 0.704664 GGGTTCCTCCACCTTCCATT 59.295 55.000 0.00 0.00 36.97 3.16
77 78 1.616994 GGGTTCCTCCACCTTCCATTG 60.617 57.143 0.00 0.00 36.97 2.82
78 79 1.075536 GGTTCCTCCACCTTCCATTGT 59.924 52.381 0.00 0.00 33.50 2.71
79 80 2.437413 GTTCCTCCACCTTCCATTGTC 58.563 52.381 0.00 0.00 0.00 3.18
80 81 0.613260 TCCTCCACCTTCCATTGTCG 59.387 55.000 0.00 0.00 0.00 4.35
81 82 1.026718 CCTCCACCTTCCATTGTCGC 61.027 60.000 0.00 0.00 0.00 5.19
82 83 1.002624 TCCACCTTCCATTGTCGCC 60.003 57.895 0.00 0.00 0.00 5.54
83 84 1.303236 CCACCTTCCATTGTCGCCA 60.303 57.895 0.00 0.00 0.00 5.69
84 85 1.586154 CCACCTTCCATTGTCGCCAC 61.586 60.000 0.00 0.00 0.00 5.01
85 86 1.303317 ACCTTCCATTGTCGCCACC 60.303 57.895 0.00 0.00 0.00 4.61
86 87 2.046285 CCTTCCATTGTCGCCACCC 61.046 63.158 0.00 0.00 0.00 4.61
87 88 2.359354 TTCCATTGTCGCCACCCG 60.359 61.111 0.00 0.00 38.61 5.28
88 89 3.185299 TTCCATTGTCGCCACCCGT 62.185 57.895 0.00 0.00 38.35 5.28
89 90 3.124921 CCATTGTCGCCACCCGTC 61.125 66.667 0.00 0.00 38.35 4.79
90 91 3.124921 CATTGTCGCCACCCGTCC 61.125 66.667 0.00 0.00 38.35 4.79
91 92 4.752879 ATTGTCGCCACCCGTCCG 62.753 66.667 0.00 0.00 38.35 4.79
111 112 4.728409 TCGTCTCGAGTGGCCTTA 57.272 55.556 13.13 0.00 0.00 2.69
112 113 2.478989 TCGTCTCGAGTGGCCTTAG 58.521 57.895 13.13 0.00 0.00 2.18
113 114 1.030488 TCGTCTCGAGTGGCCTTAGG 61.030 60.000 13.13 0.00 0.00 2.69
114 115 1.313812 CGTCTCGAGTGGCCTTAGGT 61.314 60.000 13.13 0.00 0.00 3.08
115 116 0.456628 GTCTCGAGTGGCCTTAGGTC 59.543 60.000 13.13 0.00 0.00 3.85
116 117 0.683504 TCTCGAGTGGCCTTAGGTCC 60.684 60.000 13.13 2.42 0.00 4.46
117 118 0.970937 CTCGAGTGGCCTTAGGTCCA 60.971 60.000 3.32 9.74 0.00 4.02
118 119 0.325296 TCGAGTGGCCTTAGGTCCAT 60.325 55.000 15.37 6.92 33.13 3.41
119 120 0.179073 CGAGTGGCCTTAGGTCCATG 60.179 60.000 15.37 7.21 33.13 3.66
120 121 0.181350 GAGTGGCCTTAGGTCCATGG 59.819 60.000 15.37 4.97 33.13 3.66
121 122 1.227383 GTGGCCTTAGGTCCATGGG 59.773 63.158 13.02 0.00 33.13 4.00
122 123 2.006415 TGGCCTTAGGTCCATGGGG 61.006 63.158 13.02 4.88 0.00 4.96
123 124 2.195956 GCCTTAGGTCCATGGGGC 59.804 66.667 13.02 11.92 0.00 5.80
124 125 2.927056 CCTTAGGTCCATGGGGCC 59.073 66.667 13.02 14.64 0.00 5.80
125 126 2.510906 CTTAGGTCCATGGGGCCG 59.489 66.667 13.02 0.00 36.03 6.13
126 127 2.285818 TTAGGTCCATGGGGCCGT 60.286 61.111 13.02 4.77 36.03 5.68
127 128 1.003182 TTAGGTCCATGGGGCCGTA 59.997 57.895 13.02 3.79 36.03 4.02
128 129 1.052124 TTAGGTCCATGGGGCCGTAG 61.052 60.000 13.02 0.00 36.03 3.51
129 130 2.246513 TAGGTCCATGGGGCCGTAGT 62.247 60.000 13.02 1.82 36.03 2.73
130 131 2.189521 GTCCATGGGGCCGTAGTG 59.810 66.667 13.02 0.00 0.00 2.74
131 132 3.087253 TCCATGGGGCCGTAGTGG 61.087 66.667 13.02 2.41 42.50 4.00
140 141 0.879090 GGCCGTAGTGGGTTTCTTTG 59.121 55.000 0.00 0.00 38.63 2.77
165 167 0.840617 TGTTAGGGTTGTGTCCTGCA 59.159 50.000 0.00 0.00 35.92 4.41
173 175 2.436646 GTGTCCTGCACGGGATGG 60.437 66.667 0.59 0.00 38.45 3.51
174 176 2.927856 TGTCCTGCACGGGATGGT 60.928 61.111 0.59 0.00 37.73 3.55
206 208 3.111838 CGACTCGTCAGAAGATGGAATG 58.888 50.000 0.00 0.00 0.00 2.67
207 209 2.863137 GACTCGTCAGAAGATGGAATGC 59.137 50.000 0.00 0.00 0.00 3.56
217 219 0.181350 GATGGAATGCGGTTCTCCCT 59.819 55.000 2.25 0.00 37.01 4.20
224 226 2.501610 CGGTTCTCCCTGCCTAGC 59.498 66.667 0.00 0.00 0.00 3.42
225 227 2.501610 GGTTCTCCCTGCCTAGCG 59.498 66.667 0.00 0.00 0.00 4.26
229 231 2.443016 CTCCCTGCCTAGCGTCCT 60.443 66.667 0.00 0.00 0.00 3.85
262 264 1.068250 GTCTAGCATCGTGGAGGGC 59.932 63.158 0.00 0.00 0.00 5.19
263 265 2.028190 CTAGCATCGTGGAGGGCG 59.972 66.667 0.00 0.00 0.00 6.13
264 266 2.758327 TAGCATCGTGGAGGGCGT 60.758 61.111 0.00 0.00 0.00 5.68
275 278 1.669440 GAGGGCGTGTGTGAAGGTA 59.331 57.895 0.00 0.00 0.00 3.08
277 280 0.690762 AGGGCGTGTGTGAAGGTATT 59.309 50.000 0.00 0.00 0.00 1.89
284 287 3.613193 CGTGTGTGAAGGTATTTCTCCGA 60.613 47.826 0.00 0.00 36.71 4.55
292 295 3.297736 AGGTATTTCTCCGACGGATCTT 58.702 45.455 18.71 5.57 0.00 2.40
294 297 3.181478 GGTATTTCTCCGACGGATCTTGT 60.181 47.826 18.71 5.67 0.00 3.16
295 298 4.037208 GGTATTTCTCCGACGGATCTTGTA 59.963 45.833 18.71 4.68 0.00 2.41
302 305 2.623889 CCGACGGATCTTGTAGGATTCT 59.376 50.000 8.64 0.00 34.41 2.40
303 306 3.068307 CCGACGGATCTTGTAGGATTCTT 59.932 47.826 8.64 0.00 34.41 2.52
304 307 4.441634 CCGACGGATCTTGTAGGATTCTTT 60.442 45.833 8.64 0.00 34.41 2.52
308 311 5.105473 ACGGATCTTGTAGGATTCTTTTCGA 60.105 40.000 0.00 0.00 0.00 3.71
310 313 6.144724 CGGATCTTGTAGGATTCTTTTCGATC 59.855 42.308 0.00 0.00 0.00 3.69
329 332 4.676986 CGATCGTTGTCTTTGGTGGATCTA 60.677 45.833 7.03 0.00 0.00 1.98
331 334 3.000727 CGTTGTCTTTGGTGGATCTACC 58.999 50.000 20.81 20.81 41.24 3.18
332 335 3.306780 CGTTGTCTTTGGTGGATCTACCT 60.307 47.826 26.57 0.00 41.43 3.08
345 348 5.047377 GTGGATCTACCTGGATCTGATCTTC 60.047 48.000 16.61 2.65 41.15 2.87
346 349 5.083122 GGATCTACCTGGATCTGATCTTCA 58.917 45.833 16.61 6.96 41.15 3.02
347 350 5.047377 GGATCTACCTGGATCTGATCTTCAC 60.047 48.000 16.61 1.62 41.15 3.18
375 378 2.734670 CGTTCACGTGTCTTCAGGTTA 58.265 47.619 16.51 0.00 40.09 2.85
387 390 5.103687 GTCTTCAGGTTAGATCCTTTCGAC 58.896 45.833 0.00 0.00 35.37 4.20
394 397 1.471119 AGATCCTTTCGACCTACGCA 58.529 50.000 0.00 0.00 42.26 5.24
395 398 1.134560 AGATCCTTTCGACCTACGCAC 59.865 52.381 0.00 0.00 42.26 5.34
404 407 1.799181 CGACCTACGCACCTCTTCATG 60.799 57.143 0.00 0.00 34.51 3.07
405 408 1.476891 GACCTACGCACCTCTTCATGA 59.523 52.381 0.00 0.00 0.00 3.07
418 421 2.511373 CATGAGCGGCGGTTGCTA 60.511 61.111 14.71 0.54 44.18 3.49
422 425 2.513897 AGCGGCGGTTGCTATTCC 60.514 61.111 5.44 0.00 41.87 3.01
465 468 0.892755 TAGCACAACGACTTCCCGAT 59.107 50.000 0.00 0.00 0.00 4.18
473 476 1.131883 ACGACTTCCCGATTGTCTACG 59.868 52.381 0.00 0.00 0.00 3.51
489 492 5.663456 TGTCTACGACAACAAGTTTTACCT 58.337 37.500 0.00 0.00 39.78 3.08
515 518 0.105039 GACGAGGAAAGGGCGATGAT 59.895 55.000 0.00 0.00 0.00 2.45
519 522 1.453745 GGAAAGGGCGATGATGGCA 60.454 57.895 1.08 0.00 35.84 4.92
525 539 2.587194 GCGATGATGGCAGCTCGT 60.587 61.111 19.87 4.77 31.10 4.18
530 544 1.739466 GATGATGGCAGCTCGTTTCAA 59.261 47.619 3.69 0.00 0.00 2.69
539 553 3.609175 GCAGCTCGTTTCAATGCTTGTAA 60.609 43.478 0.00 0.00 33.03 2.41
542 556 4.455533 AGCTCGTTTCAATGCTTGTAATCA 59.544 37.500 0.00 0.00 30.96 2.57
552 566 4.929819 TGCTTGTAATCATCGCTAGGTA 57.070 40.909 0.00 0.00 0.00 3.08
554 568 3.675698 GCTTGTAATCATCGCTAGGTAGC 59.324 47.826 0.00 0.00 45.62 3.58
559 573 6.420638 TGTAATCATCGCTAGGTAGCCTATA 58.579 40.000 3.39 0.00 46.34 1.31
635 649 9.663904 TTGAAACTGAATAGATCGAAAGTTTTG 57.336 29.630 12.55 0.00 37.82 2.44
637 651 6.801539 ACTGAATAGATCGAAAGTTTTGCA 57.198 33.333 0.00 0.00 0.00 4.08
639 653 6.650807 ACTGAATAGATCGAAAGTTTTGCAGA 59.349 34.615 9.87 0.85 0.00 4.26
642 656 8.017373 TGAATAGATCGAAAGTTTTGCAGAAAG 58.983 33.333 0.00 0.00 0.00 2.62
643 657 7.672983 ATAGATCGAAAGTTTTGCAGAAAGA 57.327 32.000 0.00 0.00 0.00 2.52
644 658 6.377327 AGATCGAAAGTTTTGCAGAAAGAA 57.623 33.333 0.00 0.00 0.00 2.52
645 659 6.795399 AGATCGAAAGTTTTGCAGAAAGAAA 58.205 32.000 0.00 0.00 0.00 2.52
646 660 7.257722 AGATCGAAAGTTTTGCAGAAAGAAAA 58.742 30.769 0.00 0.00 0.00 2.29
647 661 7.759433 AGATCGAAAGTTTTGCAGAAAGAAAAA 59.241 29.630 0.00 0.00 32.19 1.94
674 688 7.784633 AATGTCACAAGTTTGTTTAAATGGG 57.215 32.000 0.00 0.00 39.91 4.00
675 689 5.665459 TGTCACAAGTTTGTTTAAATGGGG 58.335 37.500 0.00 0.00 39.91 4.96
676 690 5.187967 TGTCACAAGTTTGTTTAAATGGGGT 59.812 36.000 0.00 0.00 39.91 4.95
677 691 6.380274 TGTCACAAGTTTGTTTAAATGGGGTA 59.620 34.615 0.00 0.00 39.91 3.69
678 692 7.093465 TGTCACAAGTTTGTTTAAATGGGGTAA 60.093 33.333 0.00 0.00 39.91 2.85
679 693 7.764901 GTCACAAGTTTGTTTAAATGGGGTAAA 59.235 33.333 0.00 0.00 39.91 2.01
680 694 8.487028 TCACAAGTTTGTTTAAATGGGGTAAAT 58.513 29.630 0.00 0.00 39.91 1.40
681 695 8.555361 CACAAGTTTGTTTAAATGGGGTAAATG 58.445 33.333 0.00 0.00 39.91 2.32
682 696 8.268605 ACAAGTTTGTTTAAATGGGGTAAATGT 58.731 29.630 0.00 0.00 38.47 2.71
683 697 8.555361 CAAGTTTGTTTAAATGGGGTAAATGTG 58.445 33.333 0.00 0.00 0.00 3.21
684 698 6.708502 AGTTTGTTTAAATGGGGTAAATGTGC 59.291 34.615 0.00 0.00 0.00 4.57
685 699 5.808366 TGTTTAAATGGGGTAAATGTGCA 57.192 34.783 0.00 0.00 0.00 4.57
686 700 6.174720 TGTTTAAATGGGGTAAATGTGCAA 57.825 33.333 0.00 0.00 0.00 4.08
687 701 6.591935 TGTTTAAATGGGGTAAATGTGCAAA 58.408 32.000 0.00 0.00 0.00 3.68
688 702 7.054124 TGTTTAAATGGGGTAAATGTGCAAAA 58.946 30.769 0.00 0.00 0.00 2.44
689 703 7.012421 TGTTTAAATGGGGTAAATGTGCAAAAC 59.988 33.333 0.00 0.00 0.00 2.43
690 704 4.972751 AATGGGGTAAATGTGCAAAACT 57.027 36.364 0.00 0.00 0.00 2.66
691 705 6.426646 AAATGGGGTAAATGTGCAAAACTA 57.573 33.333 0.00 0.00 0.00 2.24
692 706 4.857509 TGGGGTAAATGTGCAAAACTAC 57.142 40.909 0.00 0.00 0.00 2.73
693 707 4.475345 TGGGGTAAATGTGCAAAACTACT 58.525 39.130 0.00 0.00 0.00 2.57
694 708 5.632118 TGGGGTAAATGTGCAAAACTACTA 58.368 37.500 0.00 0.00 0.00 1.82
695 709 6.069331 TGGGGTAAATGTGCAAAACTACTAA 58.931 36.000 0.00 0.00 0.00 2.24
696 710 6.550108 TGGGGTAAATGTGCAAAACTACTAAA 59.450 34.615 0.00 0.00 0.00 1.85
697 711 7.233757 TGGGGTAAATGTGCAAAACTACTAAAT 59.766 33.333 0.00 0.00 0.00 1.40
698 712 7.544217 GGGGTAAATGTGCAAAACTACTAAATG 59.456 37.037 0.00 0.00 0.00 2.32
699 713 7.544217 GGGTAAATGTGCAAAACTACTAAATGG 59.456 37.037 0.00 0.00 0.00 3.16
700 714 7.544217 GGTAAATGTGCAAAACTACTAAATGGG 59.456 37.037 0.00 0.00 0.00 4.00
701 715 6.664428 AATGTGCAAAACTACTAAATGGGT 57.336 33.333 0.00 0.00 0.00 4.51
702 716 7.768807 AATGTGCAAAACTACTAAATGGGTA 57.231 32.000 0.00 0.00 0.00 3.69
703 717 7.768807 ATGTGCAAAACTACTAAATGGGTAA 57.231 32.000 0.00 0.00 0.00 2.85
704 718 7.768807 TGTGCAAAACTACTAAATGGGTAAT 57.231 32.000 0.00 0.00 0.00 1.89
705 719 8.184304 TGTGCAAAACTACTAAATGGGTAATT 57.816 30.769 0.00 0.00 0.00 1.40
706 720 8.085296 TGTGCAAAACTACTAAATGGGTAATTG 58.915 33.333 0.00 0.00 0.00 2.32
707 721 7.062956 GTGCAAAACTACTAAATGGGTAATTGC 59.937 37.037 0.00 0.00 35.85 3.56
708 722 6.533723 GCAAAACTACTAAATGGGTAATTGCC 59.466 38.462 3.57 3.57 32.95 4.52
709 723 6.445357 AAACTACTAAATGGGTAATTGCCG 57.555 37.500 6.48 0.00 0.00 5.69
710 724 5.362105 ACTACTAAATGGGTAATTGCCGA 57.638 39.130 6.48 2.74 0.00 5.54
711 725 5.121105 ACTACTAAATGGGTAATTGCCGAC 58.879 41.667 6.48 0.00 0.00 4.79
712 726 3.958018 ACTAAATGGGTAATTGCCGACA 58.042 40.909 6.48 0.19 0.00 4.35
713 727 3.692593 ACTAAATGGGTAATTGCCGACAC 59.307 43.478 6.48 0.00 0.00 3.67
714 728 2.208132 AATGGGTAATTGCCGACACA 57.792 45.000 6.48 0.00 32.45 3.72
715 729 1.750193 ATGGGTAATTGCCGACACAG 58.250 50.000 6.48 0.00 31.13 3.66
716 730 0.687920 TGGGTAATTGCCGACACAGA 59.312 50.000 6.48 0.00 0.00 3.41
717 731 1.084289 GGGTAATTGCCGACACAGAC 58.916 55.000 6.48 0.00 0.00 3.51
718 732 1.084289 GGTAATTGCCGACACAGACC 58.916 55.000 0.00 0.00 0.00 3.85
719 733 1.338769 GGTAATTGCCGACACAGACCT 60.339 52.381 0.00 0.00 0.00 3.85
720 734 1.732259 GTAATTGCCGACACAGACCTG 59.268 52.381 0.00 0.00 0.00 4.00
721 735 0.396435 AATTGCCGACACAGACCTGA 59.604 50.000 3.76 0.00 0.00 3.86
722 736 0.396435 ATTGCCGACACAGACCTGAA 59.604 50.000 3.76 0.00 0.00 3.02
723 737 0.179234 TTGCCGACACAGACCTGAAA 59.821 50.000 3.76 0.00 0.00 2.69
724 738 0.396435 TGCCGACACAGACCTGAAAT 59.604 50.000 3.76 0.00 0.00 2.17
725 739 1.202758 TGCCGACACAGACCTGAAATT 60.203 47.619 3.76 0.00 0.00 1.82
726 740 2.037902 TGCCGACACAGACCTGAAATTA 59.962 45.455 3.76 0.00 0.00 1.40
727 741 2.673368 GCCGACACAGACCTGAAATTAG 59.327 50.000 3.76 0.00 0.00 1.73
728 742 3.616560 GCCGACACAGACCTGAAATTAGA 60.617 47.826 3.76 0.00 0.00 2.10
729 743 4.566004 CCGACACAGACCTGAAATTAGAA 58.434 43.478 3.76 0.00 0.00 2.10
730 744 4.627467 CCGACACAGACCTGAAATTAGAAG 59.373 45.833 3.76 0.00 0.00 2.85
731 745 4.092091 CGACACAGACCTGAAATTAGAAGC 59.908 45.833 3.76 0.00 0.00 3.86
732 746 5.234466 ACACAGACCTGAAATTAGAAGCT 57.766 39.130 3.76 0.00 0.00 3.74
733 747 6.360370 ACACAGACCTGAAATTAGAAGCTA 57.640 37.500 3.76 0.00 0.00 3.32
734 748 6.769512 ACACAGACCTGAAATTAGAAGCTAA 58.230 36.000 3.76 0.00 0.00 3.09
735 749 7.398024 ACACAGACCTGAAATTAGAAGCTAAT 58.602 34.615 3.76 0.00 0.00 1.73
736 750 8.540388 ACACAGACCTGAAATTAGAAGCTAATA 58.460 33.333 3.76 0.00 0.00 0.98
737 751 9.383519 CACAGACCTGAAATTAGAAGCTAATAA 57.616 33.333 3.76 0.00 0.00 1.40
738 752 9.959721 ACAGACCTGAAATTAGAAGCTAATAAA 57.040 29.630 3.76 0.00 0.00 1.40
764 778 9.831737 ATGAAATTCACTCTTAATATATTGCGC 57.168 29.630 8.28 0.00 0.00 6.09
765 779 8.289618 TGAAATTCACTCTTAATATATTGCGCC 58.710 33.333 4.18 0.00 0.00 6.53
766 780 7.986085 AATTCACTCTTAATATATTGCGCCT 57.014 32.000 4.18 0.00 0.00 5.52
767 781 7.986085 ATTCACTCTTAATATATTGCGCCTT 57.014 32.000 4.18 0.00 0.00 4.35
768 782 7.801716 TTCACTCTTAATATATTGCGCCTTT 57.198 32.000 4.18 0.00 0.00 3.11
769 783 7.801716 TCACTCTTAATATATTGCGCCTTTT 57.198 32.000 4.18 0.00 0.00 2.27
770 784 7.861630 TCACTCTTAATATATTGCGCCTTTTC 58.138 34.615 4.18 0.00 0.00 2.29
771 785 6.792250 CACTCTTAATATATTGCGCCTTTTCG 59.208 38.462 4.18 0.00 0.00 3.46
772 786 6.704493 ACTCTTAATATATTGCGCCTTTTCGA 59.296 34.615 4.18 0.00 0.00 3.71
773 787 7.225931 ACTCTTAATATATTGCGCCTTTTCGAA 59.774 33.333 4.18 0.00 0.00 3.71
774 788 7.572759 TCTTAATATATTGCGCCTTTTCGAAG 58.427 34.615 4.18 0.00 0.00 3.79
775 789 7.439955 TCTTAATATATTGCGCCTTTTCGAAGA 59.560 33.333 4.18 2.50 0.00 2.87
776 790 3.951979 ATATTGCGCCTTTTCGAAGAG 57.048 42.857 4.18 8.69 38.43 2.85
777 791 1.808411 ATTGCGCCTTTTCGAAGAGA 58.192 45.000 16.77 0.00 38.43 3.10
778 792 1.148310 TTGCGCCTTTTCGAAGAGAG 58.852 50.000 16.77 11.07 38.43 3.20
779 793 0.317160 TGCGCCTTTTCGAAGAGAGA 59.683 50.000 16.77 0.00 38.43 3.10
780 794 1.270094 TGCGCCTTTTCGAAGAGAGAA 60.270 47.619 16.77 2.87 38.43 2.87
781 795 1.798813 GCGCCTTTTCGAAGAGAGAAA 59.201 47.619 16.77 0.00 38.43 2.52
782 796 2.411676 GCGCCTTTTCGAAGAGAGAAAC 60.412 50.000 16.77 1.02 38.43 2.78
783 797 3.060602 CGCCTTTTCGAAGAGAGAAACT 58.939 45.455 16.77 0.00 38.43 2.66
784 798 3.120854 CGCCTTTTCGAAGAGAGAAACTG 60.121 47.826 16.77 0.00 38.43 3.16
785 799 4.058817 GCCTTTTCGAAGAGAGAAACTGA 58.941 43.478 16.77 0.00 38.43 3.41
786 800 4.151512 GCCTTTTCGAAGAGAGAAACTGAG 59.848 45.833 16.77 0.00 38.43 3.35
787 801 5.533482 CCTTTTCGAAGAGAGAAACTGAGA 58.467 41.667 16.77 0.00 38.43 3.27
788 802 5.986135 CCTTTTCGAAGAGAGAAACTGAGAA 59.014 40.000 16.77 0.00 38.43 2.87
789 803 6.480320 CCTTTTCGAAGAGAGAAACTGAGAAA 59.520 38.462 16.77 0.00 38.43 2.52
790 804 7.307101 CCTTTTCGAAGAGAGAAACTGAGAAAG 60.307 40.741 16.77 3.10 38.43 2.62
791 805 5.127693 TCGAAGAGAGAAACTGAGAAAGG 57.872 43.478 0.00 0.00 0.00 3.11
792 806 4.827835 TCGAAGAGAGAAACTGAGAAAGGA 59.172 41.667 0.00 0.00 0.00 3.36
793 807 5.478679 TCGAAGAGAGAAACTGAGAAAGGAT 59.521 40.000 0.00 0.00 0.00 3.24
794 808 6.659668 TCGAAGAGAGAAACTGAGAAAGGATA 59.340 38.462 0.00 0.00 0.00 2.59
795 809 6.750039 CGAAGAGAGAAACTGAGAAAGGATAC 59.250 42.308 0.00 0.00 0.00 2.24
810 824 3.951979 GGATACTGTGAAATCTTGGCG 57.048 47.619 0.00 0.00 0.00 5.69
811 825 3.270877 GGATACTGTGAAATCTTGGCGT 58.729 45.455 0.00 0.00 0.00 5.68
812 826 3.689649 GGATACTGTGAAATCTTGGCGTT 59.310 43.478 0.00 0.00 0.00 4.84
813 827 4.201822 GGATACTGTGAAATCTTGGCGTTC 60.202 45.833 0.00 0.00 0.00 3.95
814 828 1.880027 ACTGTGAAATCTTGGCGTTCC 59.120 47.619 0.00 0.00 0.00 3.62
815 829 1.879380 CTGTGAAATCTTGGCGTTCCA 59.121 47.619 0.00 0.00 41.55 3.53
822 836 3.339731 TTGGCGTTCCAAGCGAAG 58.660 55.556 0.00 0.00 46.89 3.79
823 837 1.227704 TTGGCGTTCCAAGCGAAGA 60.228 52.632 0.00 0.00 46.89 2.87
824 838 0.816018 TTGGCGTTCCAAGCGAAGAA 60.816 50.000 0.00 0.00 46.89 2.52
825 839 1.227999 TGGCGTTCCAAGCGAAGAAG 61.228 55.000 0.00 0.00 39.99 2.85
826 840 0.949105 GGCGTTCCAAGCGAAGAAGA 60.949 55.000 0.00 0.00 35.00 2.87
832 846 4.379793 CGTTCCAAGCGAAGAAGAAAATTG 59.620 41.667 0.00 0.00 0.00 2.32
834 848 2.989166 CCAAGCGAAGAAGAAAATTGCC 59.011 45.455 0.00 0.00 0.00 4.52
836 850 2.151202 AGCGAAGAAGAAAATTGCCGA 58.849 42.857 0.00 0.00 0.00 5.54
846 860 7.610865 AGAAGAAAATTGCCGAAATTCCATAA 58.389 30.769 0.00 0.00 37.51 1.90
847 861 8.260114 AGAAGAAAATTGCCGAAATTCCATAAT 58.740 29.630 0.00 0.00 37.51 1.28
854 868 5.630121 TGCCGAAATTCCATAATATCCAGT 58.370 37.500 0.00 0.00 0.00 4.00
856 870 5.619981 GCCGAAATTCCATAATATCCAGTGC 60.620 44.000 0.00 0.00 0.00 4.40
861 875 4.623932 TCCATAATATCCAGTGCCACTC 57.376 45.455 0.00 0.00 0.00 3.51
864 878 2.604046 AATATCCAGTGCCACTCGTC 57.396 50.000 0.00 0.00 0.00 4.20
927 941 5.867716 CCGAGAACATTCCCTATAAATACCG 59.132 44.000 0.00 0.00 0.00 4.02
963 977 1.633561 CACTCGTAGTCGGTCTCGTA 58.366 55.000 0.00 0.00 37.69 3.43
964 978 1.587490 CACTCGTAGTCGGTCTCGTAG 59.413 57.143 0.00 0.00 37.69 3.51
965 979 1.203523 ACTCGTAGTCGGTCTCGTAGT 59.796 52.381 0.00 0.00 37.69 2.73
966 980 1.851666 CTCGTAGTCGGTCTCGTAGTC 59.148 57.143 0.00 0.00 37.69 2.59
967 981 0.569810 CGTAGTCGGTCTCGTAGTCG 59.430 60.000 0.00 0.00 37.69 4.18
968 982 1.634702 GTAGTCGGTCTCGTAGTCGT 58.365 55.000 0.00 0.00 38.33 4.34
969 983 2.791503 CGTAGTCGGTCTCGTAGTCGTA 60.792 54.545 0.00 0.00 38.33 3.43
970 984 1.919918 AGTCGGTCTCGTAGTCGTAG 58.080 55.000 0.00 0.00 38.33 3.51
971 985 1.203523 AGTCGGTCTCGTAGTCGTAGT 59.796 52.381 0.00 0.00 38.33 2.73
972 986 1.586123 GTCGGTCTCGTAGTCGTAGTC 59.414 57.143 0.00 0.00 38.33 2.59
973 987 0.569810 CGGTCTCGTAGTCGTAGTCG 59.430 60.000 0.00 0.00 38.33 4.18
974 988 1.634702 GGTCTCGTAGTCGTAGTCGT 58.365 55.000 0.00 0.00 38.33 4.34
975 989 2.791503 CGGTCTCGTAGTCGTAGTCGTA 60.792 54.545 0.00 0.00 38.33 3.43
976 990 3.376540 GGTCTCGTAGTCGTAGTCGTAT 58.623 50.000 0.00 0.00 38.33 3.06
977 991 3.423867 GGTCTCGTAGTCGTAGTCGTATC 59.576 52.174 0.00 0.00 38.33 2.24
1023 1037 2.831742 CCTACCCGCTACCTCGCA 60.832 66.667 0.00 0.00 0.00 5.10
1144 1158 4.367023 GCGACTGCACCGGGTACA 62.367 66.667 6.32 0.00 42.15 2.90
1287 1301 2.663196 GCCGGTAAGGTGCTCACT 59.337 61.111 1.90 0.00 43.70 3.41
1345 1359 0.931468 TATCTCCTTCCTCCCGACCA 59.069 55.000 0.00 0.00 0.00 4.02
1434 1448 4.553547 GCCAGATGCTTCAATAATCGTGTC 60.554 45.833 2.07 0.00 36.87 3.67
1436 1450 4.571984 CAGATGCTTCAATAATCGTGTCCA 59.428 41.667 2.07 0.00 0.00 4.02
1451 1465 6.582677 TCGTGTCCATAATTTGTTTTCCAT 57.417 33.333 0.00 0.00 0.00 3.41
1454 1468 8.577296 TCGTGTCCATAATTTGTTTTCCATAAA 58.423 29.630 0.00 0.00 0.00 1.40
1494 1508 4.567747 GCTTAGTCCCTTTTCAGGATTCCA 60.568 45.833 5.29 0.00 44.19 3.53
1530 1544 2.629002 CGGCTTAATTATGGCGCCT 58.371 52.632 29.70 15.76 44.46 5.52
1582 1596 3.091545 AGACTTGTGGTGGGCATATTTG 58.908 45.455 0.00 0.00 0.00 2.32
1583 1597 2.825532 GACTTGTGGTGGGCATATTTGT 59.174 45.455 0.00 0.00 0.00 2.83
1590 1604 3.900601 TGGTGGGCATATTTGTGTTTCTT 59.099 39.130 0.00 0.00 0.00 2.52
1729 1743 8.879427 ACAATATTTAGAAACTTAAGGCCTGT 57.121 30.769 5.69 0.00 0.00 4.00
1731 1745 9.788960 CAATATTTAGAAACTTAAGGCCTGTTC 57.211 33.333 5.69 5.65 0.00 3.18
1732 1746 5.934935 TTTAGAAACTTAAGGCCTGTTCG 57.065 39.130 5.69 0.00 0.00 3.95
1733 1747 2.779506 AGAAACTTAAGGCCTGTTCGG 58.220 47.619 5.69 0.00 0.00 4.30
1734 1748 2.105993 AGAAACTTAAGGCCTGTTCGGT 59.894 45.455 5.69 0.00 34.25 4.69
1735 1749 3.325716 AGAAACTTAAGGCCTGTTCGGTA 59.674 43.478 5.69 0.00 34.25 4.02
1736 1750 3.775261 AACTTAAGGCCTGTTCGGTAA 57.225 42.857 5.69 0.00 34.25 2.85
1738 1752 3.870274 ACTTAAGGCCTGTTCGGTAATC 58.130 45.455 5.69 0.00 34.25 1.75
1739 1753 3.262405 ACTTAAGGCCTGTTCGGTAATCA 59.738 43.478 5.69 0.00 34.25 2.57
1740 1754 2.403252 AAGGCCTGTTCGGTAATCAG 57.597 50.000 5.69 0.00 34.25 2.90
1741 1755 0.107654 AGGCCTGTTCGGTAATCAGC 60.108 55.000 3.11 0.00 34.25 4.26
1748 1762 2.658593 CGGTAATCAGCCGCTCCG 60.659 66.667 3.34 3.34 42.82 4.63
1761 1775 2.419198 CTCCGGGAATCTGCGGAG 59.581 66.667 0.00 0.00 38.06 4.63
1780 1794 4.494515 GGGAAAACCGCAACTCCT 57.505 55.556 0.00 0.00 0.00 3.69
1781 1795 2.728397 GGGAAAACCGCAACTCCTT 58.272 52.632 0.00 0.00 0.00 3.36
1782 1796 0.596577 GGGAAAACCGCAACTCCTTC 59.403 55.000 0.00 0.00 0.00 3.46
1783 1797 0.237498 GGAAAACCGCAACTCCTTCG 59.763 55.000 0.00 0.00 0.00 3.79
1784 1798 1.223187 GAAAACCGCAACTCCTTCGA 58.777 50.000 0.00 0.00 0.00 3.71
1785 1799 1.804748 GAAAACCGCAACTCCTTCGAT 59.195 47.619 0.00 0.00 0.00 3.59
1786 1800 1.892209 AAACCGCAACTCCTTCGATT 58.108 45.000 0.00 0.00 0.00 3.34
1787 1801 1.892209 AACCGCAACTCCTTCGATTT 58.108 45.000 0.00 0.00 0.00 2.17
1788 1802 1.156736 ACCGCAACTCCTTCGATTTG 58.843 50.000 0.00 0.00 33.08 2.32
1789 1803 1.156736 CCGCAACTCCTTCGATTTGT 58.843 50.000 0.00 0.00 32.64 2.83
1790 1804 1.135972 CCGCAACTCCTTCGATTTGTG 60.136 52.381 0.00 0.00 38.32 3.33
1791 1805 1.725931 CGCAACTCCTTCGATTTGTGC 60.726 52.381 0.00 0.00 33.93 4.57
1792 1806 1.266718 GCAACTCCTTCGATTTGTGCA 59.733 47.619 0.00 0.00 32.64 4.57
1793 1807 2.666619 GCAACTCCTTCGATTTGTGCAG 60.667 50.000 0.00 0.00 32.64 4.41
1794 1808 1.160137 ACTCCTTCGATTTGTGCAGC 58.840 50.000 0.00 0.00 0.00 5.25
1795 1809 1.159285 CTCCTTCGATTTGTGCAGCA 58.841 50.000 0.00 0.00 0.00 4.41
1796 1810 1.129998 CTCCTTCGATTTGTGCAGCAG 59.870 52.381 0.00 0.00 0.00 4.24
1797 1811 0.455633 CCTTCGATTTGTGCAGCAGC 60.456 55.000 0.00 0.00 42.57 5.25
1798 1812 0.520404 CTTCGATTTGTGCAGCAGCT 59.480 50.000 1.76 0.00 42.74 4.24
1799 1813 0.518636 TTCGATTTGTGCAGCAGCTC 59.481 50.000 1.76 0.00 42.74 4.09
1800 1814 1.136147 CGATTTGTGCAGCAGCTCC 59.864 57.895 1.76 0.00 42.74 4.70
1801 1815 1.579964 CGATTTGTGCAGCAGCTCCA 61.580 55.000 1.76 0.00 42.74 3.86
1802 1816 0.109412 GATTTGTGCAGCAGCTCCAC 60.109 55.000 9.80 9.80 42.74 4.02
1803 1817 1.530013 ATTTGTGCAGCAGCTCCACC 61.530 55.000 14.20 0.00 42.74 4.61
1804 1818 2.907695 TTTGTGCAGCAGCTCCACCA 62.908 55.000 14.20 0.00 42.74 4.17
1805 1819 2.595463 GTGCAGCAGCTCCACCAA 60.595 61.111 4.98 0.00 42.74 3.67
1806 1820 2.595463 TGCAGCAGCTCCACCAAC 60.595 61.111 1.76 0.00 42.74 3.77
1807 1821 2.282040 GCAGCAGCTCCACCAACT 60.282 61.111 0.00 0.00 37.91 3.16
1808 1822 2.331132 GCAGCAGCTCCACCAACTC 61.331 63.158 0.00 0.00 37.91 3.01
1809 1823 1.673665 CAGCAGCTCCACCAACTCC 60.674 63.158 0.00 0.00 0.00 3.85
1810 1824 2.743928 GCAGCTCCACCAACTCCG 60.744 66.667 0.00 0.00 0.00 4.63
1811 1825 2.743928 CAGCTCCACCAACTCCGC 60.744 66.667 0.00 0.00 0.00 5.54
1812 1826 2.925170 AGCTCCACCAACTCCGCT 60.925 61.111 0.00 0.00 0.00 5.52
1813 1827 2.435059 GCTCCACCAACTCCGCTC 60.435 66.667 0.00 0.00 0.00 5.03
1814 1828 2.266055 CTCCACCAACTCCGCTCC 59.734 66.667 0.00 0.00 0.00 4.70
1815 1829 3.316573 CTCCACCAACTCCGCTCCC 62.317 68.421 0.00 0.00 0.00 4.30
1816 1830 4.760047 CCACCAACTCCGCTCCCG 62.760 72.222 0.00 0.00 0.00 5.14
1817 1831 3.691342 CACCAACTCCGCTCCCGA 61.691 66.667 0.00 0.00 36.29 5.14
1818 1832 2.920912 ACCAACTCCGCTCCCGAA 60.921 61.111 0.00 0.00 36.29 4.30
1819 1833 2.125512 CCAACTCCGCTCCCGAAG 60.126 66.667 0.00 0.00 36.29 3.79
1820 1834 2.657237 CAACTCCGCTCCCGAAGT 59.343 61.111 0.00 0.00 36.29 3.01
1821 1835 1.004918 CAACTCCGCTCCCGAAGTT 60.005 57.895 0.00 0.00 36.29 2.66
1822 1836 1.004918 AACTCCGCTCCCGAAGTTG 60.005 57.895 0.00 0.00 36.29 3.16
1823 1837 2.125512 CTCCGCTCCCGAAGTTGG 60.126 66.667 0.00 0.00 36.29 3.77
1824 1838 2.920912 TCCGCTCCCGAAGTTGGT 60.921 61.111 0.00 0.00 36.29 3.67
1825 1839 2.742372 CCGCTCCCGAAGTTGGTG 60.742 66.667 0.00 0.00 36.29 4.17
1826 1840 2.742372 CGCTCCCGAAGTTGGTGG 60.742 66.667 0.00 0.00 36.29 4.61
1827 1841 2.747686 GCTCCCGAAGTTGGTGGA 59.252 61.111 0.00 0.00 0.00 4.02
1828 1842 1.376037 GCTCCCGAAGTTGGTGGAG 60.376 63.158 14.17 14.17 45.83 3.86
1829 1843 1.376037 CTCCCGAAGTTGGTGGAGC 60.376 63.158 8.66 0.00 38.12 4.70
1830 1844 2.742372 CCCGAAGTTGGTGGAGCG 60.742 66.667 0.00 0.00 0.00 5.03
1831 1845 2.742372 CCGAAGTTGGTGGAGCGG 60.742 66.667 0.00 0.00 0.00 5.52
1832 1846 2.342279 CGAAGTTGGTGGAGCGGA 59.658 61.111 0.00 0.00 0.00 5.54
1833 1847 1.738099 CGAAGTTGGTGGAGCGGAG 60.738 63.158 0.00 0.00 0.00 4.63
1834 1848 1.376037 GAAGTTGGTGGAGCGGAGG 60.376 63.158 0.00 0.00 0.00 4.30
1835 1849 2.804828 GAAGTTGGTGGAGCGGAGGG 62.805 65.000 0.00 0.00 0.00 4.30
1836 1850 4.410400 GTTGGTGGAGCGGAGGGG 62.410 72.222 0.00 0.00 0.00 4.79
1837 1851 4.974438 TTGGTGGAGCGGAGGGGT 62.974 66.667 0.00 0.00 0.00 4.95
1838 1852 3.549433 TTGGTGGAGCGGAGGGGTA 62.549 63.158 0.00 0.00 0.00 3.69
1839 1853 3.468140 GGTGGAGCGGAGGGGTAC 61.468 72.222 0.00 0.00 0.00 3.34
1851 1865 3.007323 GGGTACCGAACAGGGCCT 61.007 66.667 0.00 0.00 46.96 5.19
1852 1866 2.599757 GGGTACCGAACAGGGCCTT 61.600 63.158 1.32 0.00 46.96 4.35
1853 1867 1.266867 GGGTACCGAACAGGGCCTTA 61.267 60.000 1.32 0.00 46.96 2.69
1971 1985 7.458397 AGATGTTCTAACTTTTGTATGGGTCA 58.542 34.615 0.00 0.00 0.00 4.02
1992 2006 8.671028 GGGTCAGATGTATATAAACACGTTTTT 58.329 33.333 4.90 4.90 34.23 1.94
2006 2020 5.316488 CACGTTTTTGTGTGTTTGTTCAA 57.684 34.783 0.00 0.00 35.12 2.69
2017 2031 7.598278 TGTGTGTTTGTTCAATCAGTTTAGTT 58.402 30.769 0.00 0.00 0.00 2.24
2261 2275 7.324354 TCTATTTCACACATACACGCTAGTA 57.676 36.000 0.00 0.00 0.00 1.82
2326 2382 1.880819 ATACGCGGACGAGGTGGTTT 61.881 55.000 12.47 0.00 43.93 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.678336 GGAGGCTACAACTAACATGTGC 59.322 50.000 0.00 0.00 32.27 4.57
1 2 3.684788 GTGGAGGCTACAACTAACATGTG 59.315 47.826 0.00 0.00 32.27 3.21
2 3 3.326588 TGTGGAGGCTACAACTAACATGT 59.673 43.478 0.00 0.00 34.81 3.21
3 4 3.937814 TGTGGAGGCTACAACTAACATG 58.062 45.455 0.00 0.00 0.00 3.21
4 5 4.019321 ACATGTGGAGGCTACAACTAACAT 60.019 41.667 0.00 0.00 0.00 2.71
5 6 3.326588 ACATGTGGAGGCTACAACTAACA 59.673 43.478 0.00 0.00 0.00 2.41
6 7 3.939066 ACATGTGGAGGCTACAACTAAC 58.061 45.455 0.00 0.00 0.00 2.34
7 8 4.382685 GCTACATGTGGAGGCTACAACTAA 60.383 45.833 14.15 0.00 0.00 2.24
8 9 3.132289 GCTACATGTGGAGGCTACAACTA 59.868 47.826 14.15 0.00 0.00 2.24
9 10 2.093447 GCTACATGTGGAGGCTACAACT 60.093 50.000 14.15 0.00 0.00 3.16
10 11 2.280628 GCTACATGTGGAGGCTACAAC 58.719 52.381 14.15 0.00 0.00 3.32
11 12 1.134818 CGCTACATGTGGAGGCTACAA 60.135 52.381 14.15 0.00 0.00 2.41
12 13 0.459899 CGCTACATGTGGAGGCTACA 59.540 55.000 14.15 0.00 0.00 2.74
13 14 3.274393 CGCTACATGTGGAGGCTAC 57.726 57.895 14.15 0.00 0.00 3.58
21 22 2.124983 AGGCAGCCGCTACATGTG 60.125 61.111 9.11 0.00 38.60 3.21
22 23 2.187946 GAGGCAGCCGCTACATGT 59.812 61.111 8.15 2.69 38.60 3.21
23 24 2.590007 GGAGGCAGCCGCTACATG 60.590 66.667 15.60 0.00 38.60 3.21
24 25 2.765807 AGGAGGCAGCCGCTACAT 60.766 61.111 15.60 0.00 38.60 2.29
25 26 3.461773 GAGGAGGCAGCCGCTACA 61.462 66.667 15.60 0.00 38.60 2.74
26 27 3.145422 GAGAGGAGGCAGCCGCTAC 62.145 68.421 15.60 9.30 38.25 3.58
27 28 2.835431 GAGAGGAGGCAGCCGCTA 60.835 66.667 15.60 0.00 38.25 4.26
30 31 4.154347 GTGGAGAGGAGGCAGCCG 62.154 72.222 5.55 0.00 0.00 5.52
31 32 2.129555 TTTGTGGAGAGGAGGCAGCC 62.130 60.000 1.84 1.84 0.00 4.85
32 33 0.250901 TTTTGTGGAGAGGAGGCAGC 60.251 55.000 0.00 0.00 0.00 5.25
33 34 1.818642 CTTTTGTGGAGAGGAGGCAG 58.181 55.000 0.00 0.00 0.00 4.85
34 35 0.250901 GCTTTTGTGGAGAGGAGGCA 60.251 55.000 0.00 0.00 0.00 4.75
35 36 0.037447 AGCTTTTGTGGAGAGGAGGC 59.963 55.000 0.00 0.00 0.00 4.70
36 37 2.575805 AAGCTTTTGTGGAGAGGAGG 57.424 50.000 0.00 0.00 0.00 4.30
37 38 3.604582 CCTAAGCTTTTGTGGAGAGGAG 58.395 50.000 3.20 0.00 0.00 3.69
38 39 2.305927 CCCTAAGCTTTTGTGGAGAGGA 59.694 50.000 3.20 0.00 0.00 3.71
39 40 2.040412 ACCCTAAGCTTTTGTGGAGAGG 59.960 50.000 3.20 2.02 0.00 3.69
40 41 3.425162 ACCCTAAGCTTTTGTGGAGAG 57.575 47.619 3.20 0.00 0.00 3.20
41 42 3.497942 GGAACCCTAAGCTTTTGTGGAGA 60.498 47.826 3.20 0.00 0.00 3.71
42 43 2.820197 GGAACCCTAAGCTTTTGTGGAG 59.180 50.000 3.20 0.00 0.00 3.86
43 44 2.445525 AGGAACCCTAAGCTTTTGTGGA 59.554 45.455 3.20 0.00 28.47 4.02
44 45 2.820197 GAGGAACCCTAAGCTTTTGTGG 59.180 50.000 3.20 2.89 31.76 4.17
45 46 2.820197 GGAGGAACCCTAAGCTTTTGTG 59.180 50.000 3.20 0.00 31.76 3.33
46 47 2.445525 TGGAGGAACCCTAAGCTTTTGT 59.554 45.455 3.20 0.00 38.00 2.83
47 48 2.820197 GTGGAGGAACCCTAAGCTTTTG 59.180 50.000 3.20 0.00 38.00 2.44
48 49 2.225041 GGTGGAGGAACCCTAAGCTTTT 60.225 50.000 3.20 0.00 38.00 2.27
49 50 1.354705 GGTGGAGGAACCCTAAGCTTT 59.645 52.381 3.20 0.00 38.00 3.51
50 51 0.992695 GGTGGAGGAACCCTAAGCTT 59.007 55.000 3.48 3.48 38.00 3.74
51 52 0.119358 AGGTGGAGGAACCCTAAGCT 59.881 55.000 0.00 0.00 41.54 3.74
52 53 0.992695 AAGGTGGAGGAACCCTAAGC 59.007 55.000 0.00 0.00 41.54 3.09
53 54 1.560146 GGAAGGTGGAGGAACCCTAAG 59.440 57.143 0.00 0.00 41.54 2.18
54 55 1.132332 TGGAAGGTGGAGGAACCCTAA 60.132 52.381 0.00 0.00 41.54 2.69
55 56 0.494551 TGGAAGGTGGAGGAACCCTA 59.505 55.000 0.00 0.00 41.54 3.53
56 57 0.178831 ATGGAAGGTGGAGGAACCCT 60.179 55.000 0.00 0.00 41.54 4.34
57 58 0.704664 AATGGAAGGTGGAGGAACCC 59.295 55.000 0.00 0.00 41.54 4.11
58 59 1.075536 ACAATGGAAGGTGGAGGAACC 59.924 52.381 0.00 0.00 40.85 3.62
59 60 2.437413 GACAATGGAAGGTGGAGGAAC 58.563 52.381 0.00 0.00 0.00 3.62
60 61 1.003118 CGACAATGGAAGGTGGAGGAA 59.997 52.381 0.00 0.00 0.00 3.36
61 62 0.613260 CGACAATGGAAGGTGGAGGA 59.387 55.000 0.00 0.00 0.00 3.71
62 63 1.026718 GCGACAATGGAAGGTGGAGG 61.027 60.000 0.00 0.00 0.00 4.30
63 64 1.026718 GGCGACAATGGAAGGTGGAG 61.027 60.000 0.00 0.00 0.00 3.86
64 65 1.002624 GGCGACAATGGAAGGTGGA 60.003 57.895 0.00 0.00 0.00 4.02
65 66 1.303236 TGGCGACAATGGAAGGTGG 60.303 57.895 0.00 0.00 37.44 4.61
66 67 1.586154 GGTGGCGACAATGGAAGGTG 61.586 60.000 0.00 0.00 46.06 4.00
67 68 1.303317 GGTGGCGACAATGGAAGGT 60.303 57.895 0.00 0.00 46.06 3.50
68 69 2.046285 GGGTGGCGACAATGGAAGG 61.046 63.158 0.00 0.00 46.06 3.46
69 70 2.398554 CGGGTGGCGACAATGGAAG 61.399 63.158 0.00 0.00 46.06 3.46
70 71 2.359354 CGGGTGGCGACAATGGAA 60.359 61.111 0.00 0.00 46.06 3.53
71 72 3.599285 GACGGGTGGCGACAATGGA 62.599 63.158 0.00 0.00 46.06 3.41
72 73 3.124921 GACGGGTGGCGACAATGG 61.125 66.667 0.00 0.00 46.06 3.16
73 74 3.124921 GGACGGGTGGCGACAATG 61.125 66.667 0.00 0.00 46.06 2.82
74 75 4.752879 CGGACGGGTGGCGACAAT 62.753 66.667 0.00 0.00 46.06 2.71
94 95 1.030488 CCTAAGGCCACTCGAGACGA 61.030 60.000 21.68 0.00 0.00 4.20
95 96 1.313812 ACCTAAGGCCACTCGAGACG 61.314 60.000 21.68 9.58 0.00 4.18
96 97 0.456628 GACCTAAGGCCACTCGAGAC 59.543 60.000 21.68 7.88 0.00 3.36
97 98 0.683504 GGACCTAAGGCCACTCGAGA 60.684 60.000 21.68 0.00 0.00 4.04
98 99 0.970937 TGGACCTAAGGCCACTCGAG 60.971 60.000 11.84 11.84 0.00 4.04
99 100 0.325296 ATGGACCTAAGGCCACTCGA 60.325 55.000 5.01 0.00 33.27 4.04
100 101 0.179073 CATGGACCTAAGGCCACTCG 60.179 60.000 5.01 0.00 33.27 4.18
101 102 0.181350 CCATGGACCTAAGGCCACTC 59.819 60.000 5.56 0.00 33.27 3.51
102 103 1.281925 CCCATGGACCTAAGGCCACT 61.282 60.000 15.22 0.00 33.27 4.00
103 104 1.227383 CCCATGGACCTAAGGCCAC 59.773 63.158 15.22 0.00 33.27 5.01
104 105 2.006415 CCCCATGGACCTAAGGCCA 61.006 63.158 15.22 2.00 34.50 5.36
105 106 2.927056 CCCCATGGACCTAAGGCC 59.073 66.667 15.22 0.00 0.00 5.19
106 107 2.195956 GCCCCATGGACCTAAGGC 59.804 66.667 15.22 12.80 0.00 4.35
107 108 2.927056 GGCCCCATGGACCTAAGG 59.073 66.667 15.22 5.61 30.93 2.69
108 109 1.052124 TACGGCCCCATGGACCTAAG 61.052 60.000 15.22 4.57 35.53 2.18
109 110 1.003182 TACGGCCCCATGGACCTAA 59.997 57.895 15.22 2.20 35.53 2.69
110 111 1.458777 CTACGGCCCCATGGACCTA 60.459 63.158 15.22 7.80 35.53 3.08
111 112 2.768344 CTACGGCCCCATGGACCT 60.768 66.667 15.22 7.08 35.53 3.85
112 113 3.087906 ACTACGGCCCCATGGACC 61.088 66.667 15.22 13.61 35.53 4.46
113 114 2.189521 CACTACGGCCCCATGGAC 59.810 66.667 15.22 4.53 35.66 4.02
114 115 3.087253 CCACTACGGCCCCATGGA 61.087 66.667 15.22 0.00 31.69 3.41
115 116 4.189580 CCCACTACGGCCCCATGG 62.190 72.222 4.14 4.14 0.00 3.66
116 117 2.493273 AAACCCACTACGGCCCCATG 62.493 60.000 0.00 0.00 0.00 3.66
117 118 2.206182 GAAACCCACTACGGCCCCAT 62.206 60.000 0.00 0.00 0.00 4.00
118 119 2.855014 AAACCCACTACGGCCCCA 60.855 61.111 0.00 0.00 0.00 4.96
119 120 2.045634 GAAACCCACTACGGCCCC 60.046 66.667 0.00 0.00 0.00 5.80
120 121 0.251033 AAAGAAACCCACTACGGCCC 60.251 55.000 0.00 0.00 0.00 5.80
121 122 0.879090 CAAAGAAACCCACTACGGCC 59.121 55.000 0.00 0.00 0.00 6.13
122 123 1.804748 CTCAAAGAAACCCACTACGGC 59.195 52.381 0.00 0.00 0.00 5.68
123 124 3.121738 ACTCAAAGAAACCCACTACGG 57.878 47.619 0.00 0.00 0.00 4.02
124 125 5.163693 ACAAAACTCAAAGAAACCCACTACG 60.164 40.000 0.00 0.00 0.00 3.51
125 126 6.203808 ACAAAACTCAAAGAAACCCACTAC 57.796 37.500 0.00 0.00 0.00 2.73
126 127 6.844097 AACAAAACTCAAAGAAACCCACTA 57.156 33.333 0.00 0.00 0.00 2.74
127 128 5.738619 AACAAAACTCAAAGAAACCCACT 57.261 34.783 0.00 0.00 0.00 4.00
128 129 6.040247 CCTAACAAAACTCAAAGAAACCCAC 58.960 40.000 0.00 0.00 0.00 4.61
129 130 5.128008 CCCTAACAAAACTCAAAGAAACCCA 59.872 40.000 0.00 0.00 0.00 4.51
130 131 5.128171 ACCCTAACAAAACTCAAAGAAACCC 59.872 40.000 0.00 0.00 0.00 4.11
131 132 6.216801 ACCCTAACAAAACTCAAAGAAACC 57.783 37.500 0.00 0.00 0.00 3.27
140 141 4.036380 CAGGACACAACCCTAACAAAACTC 59.964 45.833 0.00 0.00 31.64 3.01
165 167 3.771160 GCCGTCTCACCATCCCGT 61.771 66.667 0.00 0.00 0.00 5.28
167 169 4.530857 CCGCCGTCTCACCATCCC 62.531 72.222 0.00 0.00 0.00 3.85
187 189 2.736719 CGCATTCCATCTTCTGACGAGT 60.737 50.000 0.00 0.00 0.00 4.18
191 193 2.029838 ACCGCATTCCATCTTCTGAC 57.970 50.000 0.00 0.00 0.00 3.51
193 195 2.611292 GAGAACCGCATTCCATCTTCTG 59.389 50.000 0.00 0.00 38.16 3.02
194 196 2.420687 GGAGAACCGCATTCCATCTTCT 60.421 50.000 0.00 0.00 38.16 2.85
206 208 2.501610 CTAGGCAGGGAGAACCGC 59.498 66.667 0.00 0.00 46.96 5.68
207 209 2.501610 GCTAGGCAGGGAGAACCG 59.498 66.667 0.00 0.00 46.96 4.44
217 219 3.138798 GGACGAGGACGCTAGGCA 61.139 66.667 0.00 0.00 43.96 4.75
256 258 1.823169 TACCTTCACACACGCCCTCC 61.823 60.000 0.00 0.00 0.00 4.30
258 260 0.690762 AATACCTTCACACACGCCCT 59.309 50.000 0.00 0.00 0.00 5.19
259 261 1.467342 GAAATACCTTCACACACGCCC 59.533 52.381 0.00 0.00 33.86 6.13
262 264 2.666508 CGGAGAAATACCTTCACACACG 59.333 50.000 0.00 0.00 36.40 4.49
263 265 3.678548 GTCGGAGAAATACCTTCACACAC 59.321 47.826 0.00 0.00 39.69 3.82
264 266 3.613193 CGTCGGAGAAATACCTTCACACA 60.613 47.826 0.00 0.00 39.69 3.72
275 278 3.068307 CCTACAAGATCCGTCGGAGAAAT 59.932 47.826 20.50 1.90 39.69 2.17
277 280 2.022195 CCTACAAGATCCGTCGGAGAA 58.978 52.381 20.50 0.00 39.69 2.87
284 287 5.105473 TCGAAAAGAATCCTACAAGATCCGT 60.105 40.000 0.00 0.00 0.00 4.69
292 295 5.475719 ACAACGATCGAAAAGAATCCTACA 58.524 37.500 24.34 0.00 0.00 2.74
294 297 5.962433 AGACAACGATCGAAAAGAATCCTA 58.038 37.500 24.34 0.00 0.00 2.94
295 298 4.822026 AGACAACGATCGAAAAGAATCCT 58.178 39.130 24.34 3.18 0.00 3.24
302 305 3.002862 CCACCAAAGACAACGATCGAAAA 59.997 43.478 24.34 0.00 0.00 2.29
303 306 2.546368 CCACCAAAGACAACGATCGAAA 59.454 45.455 24.34 0.00 0.00 3.46
304 307 2.139917 CCACCAAAGACAACGATCGAA 58.860 47.619 24.34 0.00 0.00 3.71
308 311 3.703001 AGATCCACCAAAGACAACGAT 57.297 42.857 0.00 0.00 0.00 3.73
310 313 3.000727 GGTAGATCCACCAAAGACAACG 58.999 50.000 5.33 0.00 38.55 4.10
329 332 2.692557 CGAGTGAAGATCAGATCCAGGT 59.307 50.000 6.80 0.00 0.00 4.00
331 334 3.631686 AGACGAGTGAAGATCAGATCCAG 59.368 47.826 6.80 0.00 0.00 3.86
332 335 3.625853 AGACGAGTGAAGATCAGATCCA 58.374 45.455 6.80 0.00 0.00 3.41
375 378 1.134560 GTGCGTAGGTCGAAAGGATCT 59.865 52.381 0.00 0.00 42.86 2.75
387 390 1.804372 GCTCATGAAGAGGTGCGTAGG 60.804 57.143 0.00 0.00 44.86 3.18
394 397 2.185350 CGCCGCTCATGAAGAGGT 59.815 61.111 13.49 0.00 46.10 3.85
404 407 2.534903 GGAATAGCAACCGCCGCTC 61.535 63.158 0.00 0.00 40.96 5.03
405 408 2.513897 GGAATAGCAACCGCCGCT 60.514 61.111 0.00 0.00 43.62 5.52
418 421 4.778143 GGACCAGCGCACCGGAAT 62.778 66.667 9.46 0.00 0.00 3.01
422 425 2.586079 CATAGGACCAGCGCACCG 60.586 66.667 11.47 0.00 0.00 4.94
473 476 3.004419 GGAGCCAGGTAAAACTTGTTGTC 59.996 47.826 0.00 0.00 0.00 3.18
484 487 2.050350 CCTCGTCGGAGCCAGGTAA 61.050 63.158 0.00 0.00 39.06 2.85
486 489 3.881019 TTCCTCGTCGGAGCCAGGT 62.881 63.158 0.00 0.00 44.28 4.00
489 492 2.646175 CCTTTCCTCGTCGGAGCCA 61.646 63.158 0.00 0.00 44.28 4.75
503 506 2.123428 GCTGCCATCATCGCCCTTT 61.123 57.895 0.00 0.00 0.00 3.11
505 508 3.472943 GAGCTGCCATCATCGCCCT 62.473 63.158 0.00 0.00 0.00 5.19
515 518 0.890542 AGCATTGAAACGAGCTGCCA 60.891 50.000 0.00 0.00 35.72 4.92
530 544 4.342862 ACCTAGCGATGATTACAAGCAT 57.657 40.909 0.00 0.00 37.81 3.79
552 566 7.863901 AAAGTTACATCCAGATCTATAGGCT 57.136 36.000 0.00 0.00 0.00 4.58
600 614 8.606602 CGATCTATTCAGTTTCAATCATGACAA 58.393 33.333 0.00 0.00 34.61 3.18
603 617 8.947055 TTCGATCTATTCAGTTTCAATCATGA 57.053 30.769 0.00 0.00 0.00 3.07
614 628 6.650807 TCTGCAAAACTTTCGATCTATTCAGT 59.349 34.615 0.00 0.00 0.00 3.41
615 629 7.065216 TCTGCAAAACTTTCGATCTATTCAG 57.935 36.000 0.00 0.00 0.00 3.02
648 662 9.487790 CCCATTTAAACAAACTTGTGACATTAT 57.512 29.630 0.00 0.00 41.31 1.28
649 663 7.928706 CCCCATTTAAACAAACTTGTGACATTA 59.071 33.333 0.00 0.00 41.31 1.90
650 664 6.765512 CCCCATTTAAACAAACTTGTGACATT 59.234 34.615 0.00 0.00 41.31 2.71
651 665 6.126911 ACCCCATTTAAACAAACTTGTGACAT 60.127 34.615 0.00 0.00 41.31 3.06
652 666 5.187967 ACCCCATTTAAACAAACTTGTGACA 59.812 36.000 0.00 0.00 41.31 3.58
653 667 5.666462 ACCCCATTTAAACAAACTTGTGAC 58.334 37.500 0.00 0.00 41.31 3.67
654 668 5.941555 ACCCCATTTAAACAAACTTGTGA 57.058 34.783 0.00 0.00 41.31 3.58
655 669 8.555361 CATTTACCCCATTTAAACAAACTTGTG 58.445 33.333 0.00 0.00 41.31 3.33
656 670 8.268605 ACATTTACCCCATTTAAACAAACTTGT 58.731 29.630 0.00 0.00 44.72 3.16
657 671 8.555361 CACATTTACCCCATTTAAACAAACTTG 58.445 33.333 0.00 0.00 0.00 3.16
658 672 7.227711 GCACATTTACCCCATTTAAACAAACTT 59.772 33.333 0.00 0.00 0.00 2.66
659 673 6.708502 GCACATTTACCCCATTTAAACAAACT 59.291 34.615 0.00 0.00 0.00 2.66
660 674 6.483640 TGCACATTTACCCCATTTAAACAAAC 59.516 34.615 0.00 0.00 0.00 2.93
661 675 6.591935 TGCACATTTACCCCATTTAAACAAA 58.408 32.000 0.00 0.00 0.00 2.83
662 676 6.174720 TGCACATTTACCCCATTTAAACAA 57.825 33.333 0.00 0.00 0.00 2.83
663 677 5.808366 TGCACATTTACCCCATTTAAACA 57.192 34.783 0.00 0.00 0.00 2.83
664 678 7.227711 AGTTTTGCACATTTACCCCATTTAAAC 59.772 33.333 0.00 0.00 0.00 2.01
665 679 7.283329 AGTTTTGCACATTTACCCCATTTAAA 58.717 30.769 0.00 0.00 0.00 1.52
666 680 6.831976 AGTTTTGCACATTTACCCCATTTAA 58.168 32.000 0.00 0.00 0.00 1.52
667 681 6.426646 AGTTTTGCACATTTACCCCATTTA 57.573 33.333 0.00 0.00 0.00 1.40
668 682 5.303259 AGTTTTGCACATTTACCCCATTT 57.697 34.783 0.00 0.00 0.00 2.32
669 683 4.972751 AGTTTTGCACATTTACCCCATT 57.027 36.364 0.00 0.00 0.00 3.16
670 684 5.083821 AGTAGTTTTGCACATTTACCCCAT 58.916 37.500 0.00 0.00 0.00 4.00
671 685 4.475345 AGTAGTTTTGCACATTTACCCCA 58.525 39.130 0.00 0.00 0.00 4.96
672 686 6.578163 TTAGTAGTTTTGCACATTTACCCC 57.422 37.500 0.00 0.00 0.00 4.95
673 687 7.544217 CCATTTAGTAGTTTTGCACATTTACCC 59.456 37.037 0.00 0.00 0.00 3.69
674 688 7.544217 CCCATTTAGTAGTTTTGCACATTTACC 59.456 37.037 0.00 0.00 0.00 2.85
675 689 8.085909 ACCCATTTAGTAGTTTTGCACATTTAC 58.914 33.333 0.00 0.00 0.00 2.01
676 690 8.184304 ACCCATTTAGTAGTTTTGCACATTTA 57.816 30.769 0.00 0.00 0.00 1.40
677 691 7.061566 ACCCATTTAGTAGTTTTGCACATTT 57.938 32.000 0.00 0.00 0.00 2.32
678 692 6.664428 ACCCATTTAGTAGTTTTGCACATT 57.336 33.333 0.00 0.00 0.00 2.71
679 693 7.768807 TTACCCATTTAGTAGTTTTGCACAT 57.231 32.000 0.00 0.00 0.00 3.21
680 694 7.768807 ATTACCCATTTAGTAGTTTTGCACA 57.231 32.000 0.00 0.00 0.00 4.57
681 695 7.062956 GCAATTACCCATTTAGTAGTTTTGCAC 59.937 37.037 0.00 0.00 34.93 4.57
682 696 7.093992 GCAATTACCCATTTAGTAGTTTTGCA 58.906 34.615 0.00 0.00 34.93 4.08
683 697 6.533723 GGCAATTACCCATTTAGTAGTTTTGC 59.466 38.462 0.00 0.00 34.54 3.68
684 698 6.750039 CGGCAATTACCCATTTAGTAGTTTTG 59.250 38.462 0.00 0.00 0.00 2.44
685 699 6.660094 TCGGCAATTACCCATTTAGTAGTTTT 59.340 34.615 0.00 0.00 0.00 2.43
686 700 6.094464 GTCGGCAATTACCCATTTAGTAGTTT 59.906 38.462 0.00 0.00 0.00 2.66
687 701 5.587443 GTCGGCAATTACCCATTTAGTAGTT 59.413 40.000 0.00 0.00 0.00 2.24
688 702 5.121105 GTCGGCAATTACCCATTTAGTAGT 58.879 41.667 0.00 0.00 0.00 2.73
689 703 5.007332 GTGTCGGCAATTACCCATTTAGTAG 59.993 44.000 0.00 0.00 0.00 2.57
690 704 4.877251 GTGTCGGCAATTACCCATTTAGTA 59.123 41.667 0.00 0.00 0.00 1.82
691 705 3.692593 GTGTCGGCAATTACCCATTTAGT 59.307 43.478 0.00 0.00 0.00 2.24
692 706 3.692101 TGTGTCGGCAATTACCCATTTAG 59.308 43.478 0.00 0.00 0.00 1.85
693 707 3.687125 TGTGTCGGCAATTACCCATTTA 58.313 40.909 0.00 0.00 0.00 1.40
694 708 2.491693 CTGTGTCGGCAATTACCCATTT 59.508 45.455 0.00 0.00 0.00 2.32
695 709 2.091541 CTGTGTCGGCAATTACCCATT 58.908 47.619 0.00 0.00 0.00 3.16
696 710 1.280710 TCTGTGTCGGCAATTACCCAT 59.719 47.619 0.00 0.00 0.00 4.00
697 711 0.687920 TCTGTGTCGGCAATTACCCA 59.312 50.000 0.00 0.00 0.00 4.51
698 712 1.084289 GTCTGTGTCGGCAATTACCC 58.916 55.000 0.00 0.00 0.00 3.69
699 713 1.084289 GGTCTGTGTCGGCAATTACC 58.916 55.000 0.00 0.00 0.00 2.85
700 714 1.732259 CAGGTCTGTGTCGGCAATTAC 59.268 52.381 0.00 0.00 0.00 1.89
701 715 1.621317 TCAGGTCTGTGTCGGCAATTA 59.379 47.619 0.00 0.00 0.00 1.40
702 716 0.396435 TCAGGTCTGTGTCGGCAATT 59.604 50.000 0.00 0.00 0.00 2.32
703 717 0.396435 TTCAGGTCTGTGTCGGCAAT 59.604 50.000 0.00 0.00 0.00 3.56
704 718 0.179234 TTTCAGGTCTGTGTCGGCAA 59.821 50.000 0.00 0.00 0.00 4.52
705 719 0.396435 ATTTCAGGTCTGTGTCGGCA 59.604 50.000 0.00 0.00 0.00 5.69
706 720 1.523758 AATTTCAGGTCTGTGTCGGC 58.476 50.000 0.00 0.00 0.00 5.54
707 721 4.188247 TCTAATTTCAGGTCTGTGTCGG 57.812 45.455 0.00 0.00 0.00 4.79
708 722 4.092091 GCTTCTAATTTCAGGTCTGTGTCG 59.908 45.833 0.00 0.00 0.00 4.35
709 723 5.241662 AGCTTCTAATTTCAGGTCTGTGTC 58.758 41.667 0.00 0.00 0.00 3.67
710 724 5.234466 AGCTTCTAATTTCAGGTCTGTGT 57.766 39.130 0.00 0.00 0.00 3.72
711 725 7.856145 ATTAGCTTCTAATTTCAGGTCTGTG 57.144 36.000 0.00 0.00 0.00 3.66
712 726 9.959721 TTTATTAGCTTCTAATTTCAGGTCTGT 57.040 29.630 0.00 0.00 0.00 3.41
738 752 9.831737 GCGCAATATATTAAGAGTGAATTTCAT 57.168 29.630 0.30 0.00 0.00 2.57
739 753 8.289618 GGCGCAATATATTAAGAGTGAATTTCA 58.710 33.333 10.83 0.00 0.00 2.69
740 754 8.507249 AGGCGCAATATATTAAGAGTGAATTTC 58.493 33.333 10.83 0.00 0.00 2.17
741 755 8.396272 AGGCGCAATATATTAAGAGTGAATTT 57.604 30.769 10.83 0.00 0.00 1.82
742 756 7.986085 AGGCGCAATATATTAAGAGTGAATT 57.014 32.000 10.83 0.00 0.00 2.17
743 757 7.986085 AAGGCGCAATATATTAAGAGTGAAT 57.014 32.000 10.83 0.00 0.00 2.57
744 758 7.801716 AAAGGCGCAATATATTAAGAGTGAA 57.198 32.000 10.83 0.00 0.00 3.18
745 759 7.307160 CGAAAAGGCGCAATATATTAAGAGTGA 60.307 37.037 10.83 0.00 0.00 3.41
746 760 6.792250 CGAAAAGGCGCAATATATTAAGAGTG 59.208 38.462 10.83 0.00 0.00 3.51
747 761 6.704493 TCGAAAAGGCGCAATATATTAAGAGT 59.296 34.615 10.83 0.00 0.00 3.24
748 762 7.117241 TCGAAAAGGCGCAATATATTAAGAG 57.883 36.000 10.83 0.00 0.00 2.85
749 763 7.439955 TCTTCGAAAAGGCGCAATATATTAAGA 59.560 33.333 10.83 6.24 33.03 2.10
750 764 7.572759 TCTTCGAAAAGGCGCAATATATTAAG 58.427 34.615 10.83 3.78 33.03 1.85
751 765 7.439955 TCTCTTCGAAAAGGCGCAATATATTAA 59.560 33.333 10.83 0.00 33.03 1.40
752 766 6.926826 TCTCTTCGAAAAGGCGCAATATATTA 59.073 34.615 10.83 0.00 33.03 0.98
753 767 5.758296 TCTCTTCGAAAAGGCGCAATATATT 59.242 36.000 10.83 0.00 33.03 1.28
754 768 5.297547 TCTCTTCGAAAAGGCGCAATATAT 58.702 37.500 10.83 0.00 33.03 0.86
755 769 4.689071 TCTCTTCGAAAAGGCGCAATATA 58.311 39.130 10.83 0.00 33.03 0.86
756 770 3.531538 TCTCTTCGAAAAGGCGCAATAT 58.468 40.909 10.83 0.00 33.03 1.28
757 771 2.930040 CTCTCTTCGAAAAGGCGCAATA 59.070 45.455 10.83 0.00 33.03 1.90
758 772 1.734465 CTCTCTTCGAAAAGGCGCAAT 59.266 47.619 10.83 0.00 33.03 3.56
759 773 1.148310 CTCTCTTCGAAAAGGCGCAA 58.852 50.000 10.83 0.00 33.03 4.85
760 774 0.317160 TCTCTCTTCGAAAAGGCGCA 59.683 50.000 10.83 0.00 33.03 6.09
761 775 1.429463 TTCTCTCTTCGAAAAGGCGC 58.571 50.000 0.00 0.00 33.03 6.53
762 776 3.060602 AGTTTCTCTCTTCGAAAAGGCG 58.939 45.455 0.00 0.00 32.71 5.52
763 777 4.058817 TCAGTTTCTCTCTTCGAAAAGGC 58.941 43.478 0.00 0.00 32.71 4.35
764 778 5.533482 TCTCAGTTTCTCTCTTCGAAAAGG 58.467 41.667 0.00 0.00 32.71 3.11
765 779 7.307101 CCTTTCTCAGTTTCTCTCTTCGAAAAG 60.307 40.741 0.00 0.00 32.71 2.27
766 780 6.480320 CCTTTCTCAGTTTCTCTCTTCGAAAA 59.520 38.462 0.00 0.00 32.71 2.29
767 781 5.986135 CCTTTCTCAGTTTCTCTCTTCGAAA 59.014 40.000 0.00 0.00 0.00 3.46
768 782 5.302059 TCCTTTCTCAGTTTCTCTCTTCGAA 59.698 40.000 0.00 0.00 0.00 3.71
769 783 4.827835 TCCTTTCTCAGTTTCTCTCTTCGA 59.172 41.667 0.00 0.00 0.00 3.71
770 784 5.127693 TCCTTTCTCAGTTTCTCTCTTCG 57.872 43.478 0.00 0.00 0.00 3.79
771 785 7.759433 CAGTATCCTTTCTCAGTTTCTCTCTTC 59.241 40.741 0.00 0.00 0.00 2.87
772 786 7.234577 ACAGTATCCTTTCTCAGTTTCTCTCTT 59.765 37.037 0.00 0.00 0.00 2.85
773 787 6.723977 ACAGTATCCTTTCTCAGTTTCTCTCT 59.276 38.462 0.00 0.00 0.00 3.10
774 788 6.811170 CACAGTATCCTTTCTCAGTTTCTCTC 59.189 42.308 0.00 0.00 0.00 3.20
775 789 6.495181 TCACAGTATCCTTTCTCAGTTTCTCT 59.505 38.462 0.00 0.00 0.00 3.10
776 790 6.692486 TCACAGTATCCTTTCTCAGTTTCTC 58.308 40.000 0.00 0.00 0.00 2.87
777 791 6.672266 TCACAGTATCCTTTCTCAGTTTCT 57.328 37.500 0.00 0.00 0.00 2.52
778 792 7.730364 TTTCACAGTATCCTTTCTCAGTTTC 57.270 36.000 0.00 0.00 0.00 2.78
779 793 8.160106 AGATTTCACAGTATCCTTTCTCAGTTT 58.840 33.333 0.00 0.00 0.00 2.66
780 794 7.684529 AGATTTCACAGTATCCTTTCTCAGTT 58.315 34.615 0.00 0.00 0.00 3.16
781 795 7.251321 AGATTTCACAGTATCCTTTCTCAGT 57.749 36.000 0.00 0.00 0.00 3.41
782 796 7.065563 CCAAGATTTCACAGTATCCTTTCTCAG 59.934 40.741 0.00 0.00 0.00 3.35
783 797 6.881065 CCAAGATTTCACAGTATCCTTTCTCA 59.119 38.462 0.00 0.00 0.00 3.27
784 798 6.183360 GCCAAGATTTCACAGTATCCTTTCTC 60.183 42.308 0.00 0.00 0.00 2.87
785 799 5.649831 GCCAAGATTTCACAGTATCCTTTCT 59.350 40.000 0.00 0.00 0.00 2.52
786 800 5.447818 CGCCAAGATTTCACAGTATCCTTTC 60.448 44.000 0.00 0.00 0.00 2.62
787 801 4.396166 CGCCAAGATTTCACAGTATCCTTT 59.604 41.667 0.00 0.00 0.00 3.11
788 802 3.941483 CGCCAAGATTTCACAGTATCCTT 59.059 43.478 0.00 0.00 0.00 3.36
789 803 3.055094 ACGCCAAGATTTCACAGTATCCT 60.055 43.478 0.00 0.00 0.00 3.24
790 804 3.270877 ACGCCAAGATTTCACAGTATCC 58.729 45.455 0.00 0.00 0.00 2.59
791 805 4.201822 GGAACGCCAAGATTTCACAGTATC 60.202 45.833 0.00 0.00 0.00 2.24
792 806 3.689649 GGAACGCCAAGATTTCACAGTAT 59.310 43.478 0.00 0.00 0.00 2.12
793 807 3.071479 GGAACGCCAAGATTTCACAGTA 58.929 45.455 0.00 0.00 0.00 2.74
794 808 1.880027 GGAACGCCAAGATTTCACAGT 59.120 47.619 0.00 0.00 0.00 3.55
795 809 1.879380 TGGAACGCCAAGATTTCACAG 59.121 47.619 0.00 0.00 42.49 3.66
796 810 1.974265 TGGAACGCCAAGATTTCACA 58.026 45.000 0.00 0.00 42.49 3.58
806 820 1.227704 TTCTTCGCTTGGAACGCCA 60.228 52.632 0.00 0.00 44.17 5.69
807 821 0.949105 TCTTCTTCGCTTGGAACGCC 60.949 55.000 0.00 0.00 0.00 5.68
808 822 0.865769 TTCTTCTTCGCTTGGAACGC 59.134 50.000 0.00 0.00 0.00 4.84
809 823 3.602390 TTTTCTTCTTCGCTTGGAACG 57.398 42.857 0.00 0.00 0.00 3.95
810 824 4.148871 GCAATTTTCTTCTTCGCTTGGAAC 59.851 41.667 0.00 0.00 0.00 3.62
811 825 4.298332 GCAATTTTCTTCTTCGCTTGGAA 58.702 39.130 0.00 0.00 0.00 3.53
812 826 3.305335 GGCAATTTTCTTCTTCGCTTGGA 60.305 43.478 0.00 0.00 0.00 3.53
813 827 2.989166 GGCAATTTTCTTCTTCGCTTGG 59.011 45.455 0.00 0.00 0.00 3.61
814 828 2.658325 CGGCAATTTTCTTCTTCGCTTG 59.342 45.455 0.00 0.00 0.00 4.01
815 829 2.552315 TCGGCAATTTTCTTCTTCGCTT 59.448 40.909 0.00 0.00 0.00 4.68
816 830 2.151202 TCGGCAATTTTCTTCTTCGCT 58.849 42.857 0.00 0.00 0.00 4.93
817 831 2.611974 TCGGCAATTTTCTTCTTCGC 57.388 45.000 0.00 0.00 0.00 4.70
818 832 5.060940 GGAATTTCGGCAATTTTCTTCTTCG 59.939 40.000 0.00 0.00 35.02 3.79
819 833 5.925969 TGGAATTTCGGCAATTTTCTTCTTC 59.074 36.000 0.00 0.00 35.02 2.87
820 834 5.852827 TGGAATTTCGGCAATTTTCTTCTT 58.147 33.333 0.00 0.00 35.02 2.52
821 835 5.467035 TGGAATTTCGGCAATTTTCTTCT 57.533 34.783 0.00 0.00 35.02 2.85
822 836 7.826260 TTATGGAATTTCGGCAATTTTCTTC 57.174 32.000 0.00 0.00 35.02 2.87
824 838 9.696917 GATATTATGGAATTTCGGCAATTTTCT 57.303 29.630 0.00 0.00 35.02 2.52
825 839 8.925700 GGATATTATGGAATTTCGGCAATTTTC 58.074 33.333 0.00 0.00 35.02 2.29
826 840 8.428063 TGGATATTATGGAATTTCGGCAATTTT 58.572 29.630 0.00 0.00 35.02 1.82
832 846 5.619981 GCACTGGATATTATGGAATTTCGGC 60.620 44.000 0.00 0.00 0.00 5.54
834 848 5.473162 TGGCACTGGATATTATGGAATTTCG 59.527 40.000 0.00 0.00 0.00 3.46
836 850 6.376248 AGTGGCACTGGATATTATGGAATTT 58.624 36.000 21.37 0.00 0.00 1.82
846 860 0.385751 CGACGAGTGGCACTGGATAT 59.614 55.000 32.21 13.28 0.00 1.63
847 861 1.807226 CGACGAGTGGCACTGGATA 59.193 57.895 32.21 0.00 0.00 2.59
876 890 4.192317 AGATGGGAACGTTTATCTTCTGC 58.808 43.478 0.46 0.00 0.00 4.26
956 970 3.423867 GGATACGACTACGACTACGAGAC 59.576 52.174 0.00 0.00 42.66 3.36
957 971 3.316588 AGGATACGACTACGACTACGAGA 59.683 47.826 0.00 0.00 46.39 4.04
958 972 3.637432 AGGATACGACTACGACTACGAG 58.363 50.000 0.00 0.00 46.39 4.18
963 977 4.569966 CACTTGTAGGATACGACTACGACT 59.430 45.833 0.00 0.00 46.99 4.18
964 978 4.784710 GCACTTGTAGGATACGACTACGAC 60.785 50.000 0.00 0.00 46.99 4.34
965 979 3.310774 GCACTTGTAGGATACGACTACGA 59.689 47.826 0.00 0.00 46.99 3.43
966 980 3.064408 TGCACTTGTAGGATACGACTACG 59.936 47.826 0.00 0.00 46.99 3.51
967 981 4.599047 CTGCACTTGTAGGATACGACTAC 58.401 47.826 0.00 0.00 46.99 2.73
968 982 3.066342 GCTGCACTTGTAGGATACGACTA 59.934 47.826 0.00 0.00 46.99 2.59
969 983 2.159226 GCTGCACTTGTAGGATACGACT 60.159 50.000 0.00 0.00 46.99 4.18
970 984 2.194271 GCTGCACTTGTAGGATACGAC 58.806 52.381 0.00 0.00 46.99 4.34
971 985 1.202256 CGCTGCACTTGTAGGATACGA 60.202 52.381 0.00 0.00 46.99 3.43
972 986 1.200483 CGCTGCACTTGTAGGATACG 58.800 55.000 0.00 0.00 46.99 3.06
973 987 0.931005 GCGCTGCACTTGTAGGATAC 59.069 55.000 0.00 0.00 43.42 2.24
974 988 0.534873 TGCGCTGCACTTGTAGGATA 59.465 50.000 9.73 0.00 31.71 2.59
975 989 0.321564 TTGCGCTGCACTTGTAGGAT 60.322 50.000 9.73 0.00 38.71 3.24
976 990 1.070615 TTGCGCTGCACTTGTAGGA 59.929 52.632 9.73 0.00 38.71 2.94
977 991 1.207593 GTTGCGCTGCACTTGTAGG 59.792 57.895 9.73 0.00 38.71 3.18
1275 1289 2.571757 CGGCGAGTGAGCACCTTA 59.428 61.111 0.00 0.00 39.27 2.69
1345 1359 0.892358 TAGCAGTCGAAGTCGTGGGT 60.892 55.000 0.00 0.70 40.80 4.51
1454 1468 7.121315 GGGACTAAGCATTTTTATCTGTTCACT 59.879 37.037 0.00 0.00 0.00 3.41
1460 1474 8.522830 TGAAAAGGGACTAAGCATTTTTATCTG 58.477 33.333 0.00 0.00 38.49 2.90
1494 1508 2.544685 CCGATTTCTCAATCAGCTCGT 58.455 47.619 0.00 0.00 39.14 4.18
1521 1535 1.065782 TGCTCTTTGTTAGGCGCCATA 60.066 47.619 31.54 15.32 0.00 2.74
1530 1544 7.981789 AGTCATCTTATTCGATGCTCTTTGTTA 59.018 33.333 0.00 0.00 40.41 2.41
1700 1714 9.582431 GGCCTTAAGTTTCTAAATATTGTTTCC 57.418 33.333 0.00 0.00 0.00 3.13
1724 1738 2.394604 GGCTGATTACCGAACAGGC 58.605 57.895 0.00 0.00 46.52 4.85
1732 1746 2.280186 CCGGAGCGGCTGATTACC 60.280 66.667 7.50 0.00 41.17 2.85
1733 1747 2.280186 CCCGGAGCGGCTGATTAC 60.280 66.667 7.50 0.00 46.86 1.89
1734 1748 1.407656 ATTCCCGGAGCGGCTGATTA 61.408 55.000 7.50 0.00 46.86 1.75
1735 1749 2.666596 GATTCCCGGAGCGGCTGATT 62.667 60.000 7.50 0.00 46.86 2.57
1736 1750 3.164269 ATTCCCGGAGCGGCTGAT 61.164 61.111 7.50 0.00 46.86 2.90
1738 1752 3.854669 AGATTCCCGGAGCGGCTG 61.855 66.667 7.50 0.00 46.86 4.85
1739 1753 3.854669 CAGATTCCCGGAGCGGCT 61.855 66.667 0.73 0.00 46.86 5.52
1748 1762 4.918201 CCCGCTCCGCAGATTCCC 62.918 72.222 0.00 0.00 0.00 3.97
1749 1763 2.869503 TTTCCCGCTCCGCAGATTCC 62.870 60.000 0.00 0.00 0.00 3.01
1750 1764 1.024579 TTTTCCCGCTCCGCAGATTC 61.025 55.000 0.00 0.00 0.00 2.52
1752 1766 1.745489 GTTTTCCCGCTCCGCAGAT 60.745 57.895 0.00 0.00 0.00 2.90
1754 1768 3.431725 GGTTTTCCCGCTCCGCAG 61.432 66.667 0.00 0.00 0.00 5.18
1763 1777 0.596577 GAAGGAGTTGCGGTTTTCCC 59.403 55.000 0.00 0.00 36.42 3.97
1764 1778 0.237498 CGAAGGAGTTGCGGTTTTCC 59.763 55.000 0.00 0.00 0.00 3.13
1765 1779 1.223187 TCGAAGGAGTTGCGGTTTTC 58.777 50.000 0.00 0.00 0.00 2.29
1768 1782 1.535462 CAAATCGAAGGAGTTGCGGTT 59.465 47.619 0.00 0.00 40.79 4.44
1769 1783 1.156736 CAAATCGAAGGAGTTGCGGT 58.843 50.000 0.00 0.00 40.79 5.68
1770 1784 3.975992 CAAATCGAAGGAGTTGCGG 57.024 52.632 0.00 0.00 40.79 5.69
1774 1788 1.537202 GCTGCACAAATCGAAGGAGTT 59.463 47.619 0.00 0.00 0.00 3.01
1775 1789 1.160137 GCTGCACAAATCGAAGGAGT 58.840 50.000 0.00 0.00 0.00 3.85
1776 1790 1.129998 CTGCTGCACAAATCGAAGGAG 59.870 52.381 0.00 0.00 0.00 3.69
1777 1791 1.159285 CTGCTGCACAAATCGAAGGA 58.841 50.000 0.00 0.00 0.00 3.36
1778 1792 0.455633 GCTGCTGCACAAATCGAAGG 60.456 55.000 11.11 0.00 39.41 3.46
1779 1793 0.520404 AGCTGCTGCACAAATCGAAG 59.480 50.000 18.42 0.00 42.74 3.79
1780 1794 0.518636 GAGCTGCTGCACAAATCGAA 59.481 50.000 18.42 0.00 42.74 3.71
1781 1795 1.300971 GGAGCTGCTGCACAAATCGA 61.301 55.000 16.70 0.00 42.74 3.59
1782 1796 1.136147 GGAGCTGCTGCACAAATCG 59.864 57.895 16.70 0.00 42.74 3.34
1783 1797 2.260247 TGGAGCTGCTGCACAAATC 58.740 52.632 20.33 5.82 42.74 2.17
1784 1798 4.506039 TGGAGCTGCTGCACAAAT 57.494 50.000 20.33 0.00 42.74 2.32
1789 1803 2.595463 GTTGGTGGAGCTGCTGCA 60.595 61.111 20.33 20.33 42.74 4.41
1790 1804 2.282040 AGTTGGTGGAGCTGCTGC 60.282 61.111 14.73 14.73 40.05 5.25
1791 1805 1.673665 GGAGTTGGTGGAGCTGCTG 60.674 63.158 7.01 0.00 0.00 4.41
1792 1806 2.753029 GGAGTTGGTGGAGCTGCT 59.247 61.111 6.82 0.00 0.00 4.24
1793 1807 2.743928 CGGAGTTGGTGGAGCTGC 60.744 66.667 0.00 0.00 0.00 5.25
1794 1808 2.743928 GCGGAGTTGGTGGAGCTG 60.744 66.667 0.00 0.00 0.00 4.24
1795 1809 2.925170 AGCGGAGTTGGTGGAGCT 60.925 61.111 0.00 0.00 0.00 4.09
1796 1810 2.435059 GAGCGGAGTTGGTGGAGC 60.435 66.667 0.00 0.00 0.00 4.70
1797 1811 2.266055 GGAGCGGAGTTGGTGGAG 59.734 66.667 0.00 0.00 0.00 3.86
1798 1812 3.319198 GGGAGCGGAGTTGGTGGA 61.319 66.667 0.00 0.00 0.00 4.02
1799 1813 4.760047 CGGGAGCGGAGTTGGTGG 62.760 72.222 0.00 0.00 0.00 4.61
1800 1814 3.234630 TTCGGGAGCGGAGTTGGTG 62.235 63.158 0.00 0.00 0.00 4.17
1801 1815 2.920912 TTCGGGAGCGGAGTTGGT 60.921 61.111 0.00 0.00 0.00 3.67
1802 1816 2.125512 CTTCGGGAGCGGAGTTGG 60.126 66.667 0.00 0.00 0.00 3.77
1803 1817 1.004918 AACTTCGGGAGCGGAGTTG 60.005 57.895 0.00 0.00 0.00 3.16
1804 1818 1.004918 CAACTTCGGGAGCGGAGTT 60.005 57.895 0.00 0.00 0.00 3.01
1805 1819 2.657237 CAACTTCGGGAGCGGAGT 59.343 61.111 0.00 0.00 0.00 3.85
1806 1820 2.125512 CCAACTTCGGGAGCGGAG 60.126 66.667 0.00 0.00 0.00 4.63
1807 1821 2.920912 ACCAACTTCGGGAGCGGA 60.921 61.111 0.00 0.00 0.00 5.54
1808 1822 2.742372 CACCAACTTCGGGAGCGG 60.742 66.667 0.00 0.00 0.00 5.52
1809 1823 2.742372 CCACCAACTTCGGGAGCG 60.742 66.667 0.00 0.00 0.00 5.03
1810 1824 1.376037 CTCCACCAACTTCGGGAGC 60.376 63.158 0.00 0.00 40.37 4.70
1812 1826 2.747686 GCTCCACCAACTTCGGGA 59.252 61.111 0.00 0.00 0.00 5.14
1813 1827 2.742372 CGCTCCACCAACTTCGGG 60.742 66.667 0.00 0.00 0.00 5.14
1814 1828 2.742372 CCGCTCCACCAACTTCGG 60.742 66.667 0.00 0.00 0.00 4.30
1815 1829 1.738099 CTCCGCTCCACCAACTTCG 60.738 63.158 0.00 0.00 0.00 3.79
1816 1830 1.376037 CCTCCGCTCCACCAACTTC 60.376 63.158 0.00 0.00 0.00 3.01
1817 1831 2.750350 CCTCCGCTCCACCAACTT 59.250 61.111 0.00 0.00 0.00 2.66
1818 1832 3.322466 CCCTCCGCTCCACCAACT 61.322 66.667 0.00 0.00 0.00 3.16
1819 1833 4.410400 CCCCTCCGCTCCACCAAC 62.410 72.222 0.00 0.00 0.00 3.77
1820 1834 3.549433 TACCCCTCCGCTCCACCAA 62.549 63.158 0.00 0.00 0.00 3.67
1821 1835 4.000620 TACCCCTCCGCTCCACCA 62.001 66.667 0.00 0.00 0.00 4.17
1822 1836 3.468140 GTACCCCTCCGCTCCACC 61.468 72.222 0.00 0.00 0.00 4.61
1823 1837 3.468140 GGTACCCCTCCGCTCCAC 61.468 72.222 0.00 0.00 0.00 4.02
1825 1839 4.828296 TCGGTACCCCTCCGCTCC 62.828 72.222 6.25 0.00 46.49 4.70
1826 1840 2.757099 TTCGGTACCCCTCCGCTC 60.757 66.667 6.25 0.00 46.49 5.03
1827 1841 3.073101 GTTCGGTACCCCTCCGCT 61.073 66.667 6.25 0.00 46.49 5.52
1828 1842 3.366739 CTGTTCGGTACCCCTCCGC 62.367 68.421 6.25 0.00 46.49 5.54
1830 1844 2.364780 CCCTGTTCGGTACCCCTCC 61.365 68.421 6.25 0.00 0.00 4.30
1831 1845 3.027675 GCCCTGTTCGGTACCCCTC 62.028 68.421 6.25 0.00 0.00 4.30
1832 1846 3.007323 GCCCTGTTCGGTACCCCT 61.007 66.667 6.25 0.00 0.00 4.79
1833 1847 4.105553 GGCCCTGTTCGGTACCCC 62.106 72.222 6.25 0.00 0.00 4.95
1834 1848 1.266867 TAAGGCCCTGTTCGGTACCC 61.267 60.000 6.25 0.00 0.00 3.69
1835 1849 0.177373 CTAAGGCCCTGTTCGGTACC 59.823 60.000 0.16 0.16 0.00 3.34
1836 1850 0.900421 ACTAAGGCCCTGTTCGGTAC 59.100 55.000 0.00 0.00 0.00 3.34
1837 1851 1.188863 GACTAAGGCCCTGTTCGGTA 58.811 55.000 0.00 0.00 0.00 4.02
1838 1852 1.551019 GGACTAAGGCCCTGTTCGGT 61.551 60.000 0.00 0.00 0.00 4.69
1839 1853 1.221021 GGACTAAGGCCCTGTTCGG 59.779 63.158 0.00 0.00 0.00 4.30
1840 1854 1.153628 CGGACTAAGGCCCTGTTCG 60.154 63.158 0.00 2.43 0.00 3.95
1841 1855 1.449778 GCGGACTAAGGCCCTGTTC 60.450 63.158 0.00 0.00 0.00 3.18
1842 1856 2.669240 GCGGACTAAGGCCCTGTT 59.331 61.111 0.00 0.00 0.00 3.16
1843 1857 3.771160 CGCGGACTAAGGCCCTGT 61.771 66.667 0.00 0.00 0.00 4.00
1844 1858 3.771160 ACGCGGACTAAGGCCCTG 61.771 66.667 12.47 0.00 0.00 4.45
1845 1859 3.771160 CACGCGGACTAAGGCCCT 61.771 66.667 12.47 0.00 0.00 5.19
1846 1860 2.229690 TTACACGCGGACTAAGGCCC 62.230 60.000 12.47 0.00 0.00 5.80
1847 1861 0.179092 ATTACACGCGGACTAAGGCC 60.179 55.000 12.47 0.00 0.00 5.19
1848 1862 1.202382 AGATTACACGCGGACTAAGGC 60.202 52.381 12.47 0.00 0.00 4.35
1849 1863 2.159282 ACAGATTACACGCGGACTAAGG 60.159 50.000 12.47 0.00 0.00 2.69
1850 1864 3.146618 ACAGATTACACGCGGACTAAG 57.853 47.619 12.47 0.00 0.00 2.18
1851 1865 4.577693 AGATACAGATTACACGCGGACTAA 59.422 41.667 12.47 2.74 0.00 2.24
1852 1866 4.132336 AGATACAGATTACACGCGGACTA 58.868 43.478 12.47 0.00 0.00 2.59
1853 1867 2.950309 AGATACAGATTACACGCGGACT 59.050 45.455 12.47 0.00 0.00 3.85
1992 2006 7.151999 ACTAAACTGATTGAACAAACACACA 57.848 32.000 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.