Multiple sequence alignment - TraesCS7B01G009300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G009300 chr7B 100.000 5360 0 0 1 5360 5918723 5924082 0.000000e+00 9899.0
1 TraesCS7B01G009300 chr7B 99.583 1199 3 1 1984 3180 71172668 71171470 0.000000e+00 2185.0
2 TraesCS7B01G009300 chr7A 99.833 1196 2 0 1985 3180 376616415 376617610 0.000000e+00 2198.0
3 TraesCS7B01G009300 chr7A 93.263 1143 54 7 285 1416 68187478 68188608 0.000000e+00 1663.0
4 TraesCS7B01G009300 chr7A 90.033 1214 63 17 3180 4366 68189739 68190921 0.000000e+00 1519.0
5 TraesCS7B01G009300 chr7A 86.621 725 65 21 4649 5360 68192068 68192773 0.000000e+00 773.0
6 TraesCS7B01G009300 chr7A 90.681 279 19 4 1524 1800 68188602 68188875 1.100000e-96 364.0
7 TraesCS7B01G009300 chr7A 91.765 170 10 2 1815 1984 68189315 68189480 3.230000e-57 233.0
8 TraesCS7B01G009300 chr7A 95.902 122 4 1 1409 1530 481190076 481189956 4.240000e-46 196.0
9 TraesCS7B01G009300 chr7A 76.087 322 50 10 312 616 695809340 695809029 5.600000e-30 143.0
10 TraesCS7B01G009300 chr5A 99.833 1196 2 0 1985 3180 695336666 695337861 0.000000e+00 2198.0
11 TraesCS7B01G009300 chr5A 99.833 1196 2 0 1985 3180 695361239 695362434 0.000000e+00 2198.0
12 TraesCS7B01G009300 chr5A 90.980 1530 48 25 3180 4650 430638753 430637255 0.000000e+00 1978.0
13 TraesCS7B01G009300 chr5A 89.744 936 82 11 381 1312 430645943 430645018 0.000000e+00 1184.0
14 TraesCS7B01G009300 chr5A 98.635 513 6 1 905 1416 430640325 430639813 0.000000e+00 907.0
15 TraesCS7B01G009300 chr5A 97.810 274 6 0 1527 1800 430639816 430639543 1.750000e-129 473.0
16 TraesCS7B01G009300 chr5A 95.676 185 6 1 1800 1984 430639182 430639000 4.060000e-76 296.0
17 TraesCS7B01G009300 chr5A 84.615 299 40 3 314 612 619175601 619175893 5.250000e-75 292.0
18 TraesCS7B01G009300 chr5A 85.284 299 21 13 4766 5059 430636044 430635764 2.440000e-73 287.0
19 TraesCS7B01G009300 chr5A 84.848 297 22 13 4768 5059 430625411 430625133 1.470000e-70 278.0
20 TraesCS7B01G009300 chr5A 80.528 303 49 6 312 612 491099626 491099920 1.940000e-54 224.0
21 TraesCS7B01G009300 chr5A 95.868 121 4 1 1411 1530 38997636 38997756 1.520000e-45 195.0
22 TraesCS7B01G009300 chr5A 95.868 121 4 1 1411 1530 39114696 39114816 1.520000e-45 195.0
23 TraesCS7B01G009300 chr5A 94.488 127 6 1 1413 1538 436331136 436331010 1.520000e-45 195.0
24 TraesCS7B01G009300 chr3A 99.749 1197 2 1 1985 3180 310711364 310710168 0.000000e+00 2193.0
25 TraesCS7B01G009300 chr3A 93.293 164 8 3 711 873 675873180 675873019 6.940000e-59 239.0
26 TraesCS7B01G009300 chr1B 99.666 1198 4 0 1983 3180 449255708 449256905 0.000000e+00 2191.0
27 TraesCS7B01G009300 chr1B 99.666 1197 4 0 1984 3180 425360237 425359041 0.000000e+00 2189.0
28 TraesCS7B01G009300 chr6B 99.666 1197 4 0 1984 3180 117845723 117846919 0.000000e+00 2189.0
29 TraesCS7B01G009300 chr6B 90.141 142 11 3 1394 1535 228695282 228695144 1.190000e-41 182.0
30 TraesCS7B01G009300 chr5B 99.499 1198 5 1 1984 3180 629943031 629944228 0.000000e+00 2178.0
31 TraesCS7B01G009300 chr5B 83.946 299 41 4 314 612 611643301 611643592 4.090000e-71 279.0
32 TraesCS7B01G009300 chr5B 80.464 302 51 4 312 612 466563830 466564124 1.940000e-54 224.0
33 TraesCS7B01G009300 chr5B 90.000 170 15 2 706 873 479726830 479726999 9.040000e-53 219.0
34 TraesCS7B01G009300 chr5D 92.000 1525 44 16 3180 4650 325961499 325962999 0.000000e+00 2069.0
35 TraesCS7B01G009300 chr5D 92.694 1136 73 8 286 1416 325904240 325905370 0.000000e+00 1629.0
36 TraesCS7B01G009300 chr5D 88.670 1068 69 19 3185 4218 325906265 325907314 0.000000e+00 1254.0
37 TraesCS7B01G009300 chr5D 98.276 638 7 2 779 1416 325959825 325960458 0.000000e+00 1114.0
38 TraesCS7B01G009300 chr5D 96.709 395 11 1 354 748 325959432 325959824 0.000000e+00 656.0
39 TraesCS7B01G009300 chr5D 97.445 274 7 0 1527 1800 325960455 325960728 8.130000e-128 468.0
40 TraesCS7B01G009300 chr5D 90.942 276 21 1 1524 1799 325905364 325905635 8.480000e-98 368.0
41 TraesCS7B01G009300 chr5D 95.676 185 8 0 1800 1984 325961059 325961243 1.130000e-76 298.0
42 TraesCS7B01G009300 chr5D 79.425 452 45 24 4223 4644 325920371 325920804 5.290000e-70 276.0
43 TraesCS7B01G009300 chr5D 90.588 170 14 2 706 873 399614517 399614686 1.940000e-54 224.0
44 TraesCS7B01G009300 chr5D 86.286 175 13 7 4890 5059 325965524 325965692 4.270000e-41 180.0
45 TraesCS7B01G009300 chr5D 92.157 102 7 1 4649 4750 325963638 325963738 5.600000e-30 143.0
46 TraesCS7B01G009300 chr5D 94.521 73 3 1 673 745 325959432 325959361 1.580000e-20 111.0
47 TraesCS7B01G009300 chr5D 87.912 91 11 0 522 612 2508962 2509052 2.040000e-19 108.0
48 TraesCS7B01G009300 chr7D 88.653 1507 74 39 3180 4621 64383637 64385111 0.000000e+00 1746.0
49 TraesCS7B01G009300 chr7D 93.664 868 40 10 553 1416 64381921 64382777 0.000000e+00 1284.0
50 TraesCS7B01G009300 chr7D 83.388 614 48 19 4780 5360 64385808 64386400 2.210000e-143 520.0
51 TraesCS7B01G009300 chr7D 90.681 279 18 3 1524 1800 64382771 64383043 1.100000e-96 364.0
52 TraesCS7B01G009300 chr7D 89.785 186 13 4 1801 1984 64383197 64383378 3.230000e-57 233.0
53 TraesCS7B01G009300 chr7D 97.143 35 0 1 4616 4650 64385231 64385264 2.090000e-04 58.4
54 TraesCS7B01G009300 chr1D 85.430 302 35 4 310 611 224403519 224403227 6.740000e-79 305.0
55 TraesCS7B01G009300 chr4D 80.635 315 42 10 304 612 30509377 30509076 5.400000e-55 226.0
56 TraesCS7B01G009300 chr3D 87.568 185 19 3 691 872 320429995 320429812 1.510000e-50 211.0
57 TraesCS7B01G009300 chr6A 93.846 130 5 3 1403 1530 556533550 556533678 5.480000e-45 193.0
58 TraesCS7B01G009300 chr6A 95.726 117 5 0 1413 1529 610119879 610119763 7.090000e-44 189.0
59 TraesCS7B01G009300 chr2A 94.355 124 7 0 1406 1529 613004583 613004706 1.970000e-44 191.0
60 TraesCS7B01G009300 chr2A 90.000 140 12 2 1396 1535 447156269 447156406 4.270000e-41 180.0
61 TraesCS7B01G009300 chr2A 79.891 184 19 9 360 543 468334193 468334358 9.430000e-23 119.0
62 TraesCS7B01G009300 chr6D 83.607 183 21 5 312 494 187278184 187278011 4.300000e-36 163.0
63 TraesCS7B01G009300 chr4A 88.462 52 3 3 302 353 212692884 212692932 5.800000e-05 60.2
64 TraesCS7B01G009300 chr2D 86.792 53 7 0 312 364 621457868 621457816 5.800000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G009300 chr7B 5918723 5924082 5359 False 9899.000000 9899 100.000000 1 5360 1 chr7B.!!$F1 5359
1 TraesCS7B01G009300 chr7B 71171470 71172668 1198 True 2185.000000 2185 99.583000 1984 3180 1 chr7B.!!$R1 1196
2 TraesCS7B01G009300 chr7A 376616415 376617610 1195 False 2198.000000 2198 99.833000 1985 3180 1 chr7A.!!$F1 1195
3 TraesCS7B01G009300 chr7A 68187478 68192773 5295 False 910.400000 1663 90.472600 285 5360 5 chr7A.!!$F2 5075
4 TraesCS7B01G009300 chr5A 695336666 695337861 1195 False 2198.000000 2198 99.833000 1985 3180 1 chr5A.!!$F5 1195
5 TraesCS7B01G009300 chr5A 695361239 695362434 1195 False 2198.000000 2198 99.833000 1985 3180 1 chr5A.!!$F6 1195
6 TraesCS7B01G009300 chr5A 430645018 430645943 925 True 1184.000000 1184 89.744000 381 1312 1 chr5A.!!$R2 931
7 TraesCS7B01G009300 chr5A 430635764 430640325 4561 True 788.200000 1978 93.677000 905 5059 5 chr5A.!!$R4 4154
8 TraesCS7B01G009300 chr3A 310710168 310711364 1196 True 2193.000000 2193 99.749000 1985 3180 1 chr3A.!!$R1 1195
9 TraesCS7B01G009300 chr1B 449255708 449256905 1197 False 2191.000000 2191 99.666000 1983 3180 1 chr1B.!!$F1 1197
10 TraesCS7B01G009300 chr1B 425359041 425360237 1196 True 2189.000000 2189 99.666000 1984 3180 1 chr1B.!!$R1 1196
11 TraesCS7B01G009300 chr6B 117845723 117846919 1196 False 2189.000000 2189 99.666000 1984 3180 1 chr6B.!!$F1 1196
12 TraesCS7B01G009300 chr5B 629943031 629944228 1197 False 2178.000000 2178 99.499000 1984 3180 1 chr5B.!!$F4 1196
13 TraesCS7B01G009300 chr5D 325904240 325907314 3074 False 1083.666667 1629 90.768667 286 4218 3 chr5D.!!$F4 3932
14 TraesCS7B01G009300 chr5D 325959432 325965692 6260 False 704.000000 2069 94.078429 354 5059 7 chr5D.!!$F5 4705
15 TraesCS7B01G009300 chr7D 64381921 64386400 4479 False 700.900000 1746 90.552333 553 5360 6 chr7D.!!$F1 4807

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
76 77 0.034380 TCGACTCGAAGGGACCAGAT 60.034 55.0 0.00 0.0 31.06 2.90 F
1431 1447 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.0 5.23 0.0 44.66 2.17 F
1432 1448 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.0 5.23 0.0 44.66 1.40 F
1526 1542 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.0 13.64 0.0 46.06 3.85 F
1527 1543 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.0 13.64 0.0 46.06 2.59 F
3352 3812 0.744281 TCACGAGACAACAGTCAGCA 59.256 50.0 0.00 0.0 34.69 4.41 F
4029 4528 0.105039 CGGTTGGCTCTAGGATGGAC 59.895 60.0 0.00 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1505 1521 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12 R
3346 3806 2.057316 CACTATATCTGCGCTGCTGAC 58.943 52.381 9.73 0.00 39.15 3.51 R
3488 3953 1.453015 AACACGGTTTGCTGCAGGA 60.453 52.632 17.12 10.66 0.00 3.86 R
3559 4028 9.335891 GCTCTTTATTTCTTCTTTTCAGCTTAC 57.664 33.333 0.00 0.00 0.00 2.34 R
3596 4065 1.160137 CTTTGCGTTTCTCCCCTCTG 58.840 55.000 0.00 0.00 0.00 3.35 R
4216 4718 0.108585 TTCCTGTGTGGTTCTGGCTC 59.891 55.000 0.00 0.00 37.07 4.70 R
4983 9121 0.521291 TCGTAACCGACCAGTTACCG 59.479 55.000 8.54 5.10 46.11 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.136517 TCGCAACTCCGTTTATTTGTTC 57.863 40.909 0.00 0.00 0.00 3.18
22 23 3.560481 TCGCAACTCCGTTTATTTGTTCA 59.440 39.130 0.00 0.00 0.00 3.18
23 24 4.035324 TCGCAACTCCGTTTATTTGTTCAA 59.965 37.500 0.00 0.00 0.00 2.69
24 25 4.378616 CGCAACTCCGTTTATTTGTTCAAG 59.621 41.667 0.00 0.00 0.00 3.02
25 26 5.516090 GCAACTCCGTTTATTTGTTCAAGA 58.484 37.500 0.00 0.00 0.00 3.02
26 27 5.625311 GCAACTCCGTTTATTTGTTCAAGAG 59.375 40.000 0.00 0.00 0.00 2.85
27 28 6.512741 GCAACTCCGTTTATTTGTTCAAGAGA 60.513 38.462 0.00 0.00 0.00 3.10
28 29 6.787085 ACTCCGTTTATTTGTTCAAGAGAG 57.213 37.500 0.00 0.00 0.00 3.20
29 30 5.179555 ACTCCGTTTATTTGTTCAAGAGAGC 59.820 40.000 0.00 0.00 0.00 4.09
30 31 4.454504 TCCGTTTATTTGTTCAAGAGAGCC 59.545 41.667 0.00 0.00 0.00 4.70
31 32 4.379499 CCGTTTATTTGTTCAAGAGAGCCC 60.379 45.833 0.00 0.00 0.00 5.19
32 33 4.215399 CGTTTATTTGTTCAAGAGAGCCCA 59.785 41.667 0.00 0.00 0.00 5.36
33 34 5.461526 GTTTATTTGTTCAAGAGAGCCCAC 58.538 41.667 0.00 0.00 0.00 4.61
34 35 2.727123 TTTGTTCAAGAGAGCCCACA 57.273 45.000 0.00 0.00 0.00 4.17
35 36 2.957402 TTGTTCAAGAGAGCCCACAT 57.043 45.000 0.00 0.00 0.00 3.21
36 37 2.479566 TGTTCAAGAGAGCCCACATC 57.520 50.000 0.00 0.00 0.00 3.06
37 38 1.003580 TGTTCAAGAGAGCCCACATCC 59.996 52.381 0.00 0.00 0.00 3.51
38 39 0.250234 TTCAAGAGAGCCCACATCCG 59.750 55.000 0.00 0.00 0.00 4.18
39 40 0.614697 TCAAGAGAGCCCACATCCGA 60.615 55.000 0.00 0.00 0.00 4.55
40 41 0.179089 CAAGAGAGCCCACATCCGAG 60.179 60.000 0.00 0.00 0.00 4.63
41 42 1.965754 AAGAGAGCCCACATCCGAGC 61.966 60.000 0.00 0.00 0.00 5.03
42 43 2.685017 AGAGCCCACATCCGAGCA 60.685 61.111 0.00 0.00 0.00 4.26
43 44 2.037620 GAGAGCCCACATCCGAGCAT 62.038 60.000 0.00 0.00 0.00 3.79
44 45 1.596477 GAGCCCACATCCGAGCATC 60.596 63.158 0.00 0.00 0.00 3.91
45 46 2.190313 GCCCACATCCGAGCATCA 59.810 61.111 0.00 0.00 33.17 3.07
46 47 2.182842 GCCCACATCCGAGCATCAC 61.183 63.158 0.00 0.00 33.17 3.06
47 48 1.524621 CCCACATCCGAGCATCACC 60.525 63.158 0.00 0.00 33.17 4.02
48 49 1.524002 CCACATCCGAGCATCACCT 59.476 57.895 0.00 0.00 33.17 4.00
49 50 0.752658 CCACATCCGAGCATCACCTA 59.247 55.000 0.00 0.00 33.17 3.08
50 51 1.539065 CCACATCCGAGCATCACCTAC 60.539 57.143 0.00 0.00 33.17 3.18
51 52 1.136891 CACATCCGAGCATCACCTACA 59.863 52.381 0.00 0.00 33.17 2.74
52 53 1.137086 ACATCCGAGCATCACCTACAC 59.863 52.381 0.00 0.00 33.17 2.90
53 54 0.753262 ATCCGAGCATCACCTACACC 59.247 55.000 0.00 0.00 33.17 4.16
54 55 0.324368 TCCGAGCATCACCTACACCT 60.324 55.000 0.00 0.00 33.17 4.00
55 56 0.537188 CCGAGCATCACCTACACCTT 59.463 55.000 0.00 0.00 33.17 3.50
56 57 1.645034 CGAGCATCACCTACACCTTG 58.355 55.000 0.00 0.00 33.17 3.61
57 58 1.066858 CGAGCATCACCTACACCTTGT 60.067 52.381 0.00 0.00 33.17 3.16
58 59 2.622436 GAGCATCACCTACACCTTGTC 58.378 52.381 0.00 0.00 33.17 3.18
59 60 1.066858 AGCATCACCTACACCTTGTCG 60.067 52.381 0.00 0.00 0.00 4.35
60 61 1.067142 GCATCACCTACACCTTGTCGA 60.067 52.381 0.00 0.00 0.00 4.20
61 62 2.607187 CATCACCTACACCTTGTCGAC 58.393 52.381 9.11 9.11 0.00 4.20
62 63 1.991121 TCACCTACACCTTGTCGACT 58.009 50.000 17.92 0.00 0.00 4.18
63 64 1.884579 TCACCTACACCTTGTCGACTC 59.115 52.381 17.92 0.00 0.00 3.36
64 65 0.879765 ACCTACACCTTGTCGACTCG 59.120 55.000 17.92 7.38 0.00 4.18
65 66 1.162698 CCTACACCTTGTCGACTCGA 58.837 55.000 17.92 0.00 0.00 4.04
66 67 1.538512 CCTACACCTTGTCGACTCGAA 59.461 52.381 17.92 1.60 37.72 3.71
67 68 2.414293 CCTACACCTTGTCGACTCGAAG 60.414 54.545 17.92 11.79 37.72 3.79
68 69 0.314302 ACACCTTGTCGACTCGAAGG 59.686 55.000 24.31 24.31 39.10 3.46
69 70 0.388649 CACCTTGTCGACTCGAAGGG 60.389 60.000 27.50 16.23 37.96 3.95
70 71 0.538977 ACCTTGTCGACTCGAAGGGA 60.539 55.000 27.50 1.47 37.96 4.20
71 72 0.109226 CCTTGTCGACTCGAAGGGAC 60.109 60.000 20.30 3.24 37.72 4.46
72 73 0.109226 CTTGTCGACTCGAAGGGACC 60.109 60.000 17.92 0.00 37.72 4.46
73 74 0.824595 TTGTCGACTCGAAGGGACCA 60.825 55.000 17.92 0.00 37.72 4.02
74 75 1.241990 TGTCGACTCGAAGGGACCAG 61.242 60.000 17.92 0.00 37.72 4.00
75 76 0.959372 GTCGACTCGAAGGGACCAGA 60.959 60.000 8.70 0.00 37.72 3.86
76 77 0.034380 TCGACTCGAAGGGACCAGAT 60.034 55.000 0.00 0.00 31.06 2.90
77 78 0.382515 CGACTCGAAGGGACCAGATC 59.617 60.000 0.00 0.00 0.00 2.75
87 88 3.491208 GACCAGATCCATGCTGCTT 57.509 52.632 0.00 0.00 32.06 3.91
88 89 1.022735 GACCAGATCCATGCTGCTTG 58.977 55.000 8.44 8.44 32.06 4.01
89 90 1.035932 ACCAGATCCATGCTGCTTGC 61.036 55.000 9.81 0.00 43.25 4.01
90 91 1.734137 CAGATCCATGCTGCTTGCC 59.266 57.895 9.81 2.28 42.00 4.52
91 92 1.455217 AGATCCATGCTGCTTGCCC 60.455 57.895 9.81 1.97 42.00 5.36
92 93 1.455217 GATCCATGCTGCTTGCCCT 60.455 57.895 9.81 0.00 42.00 5.19
93 94 1.735376 GATCCATGCTGCTTGCCCTG 61.735 60.000 9.81 0.00 42.00 4.45
94 95 2.509931 ATCCATGCTGCTTGCCCTGT 62.510 55.000 9.81 0.00 42.00 4.00
95 96 2.280552 CCATGCTGCTTGCCCTGTT 61.281 57.895 9.81 0.00 42.00 3.16
96 97 1.080093 CATGCTGCTTGCCCTGTTG 60.080 57.895 0.00 0.00 42.00 3.33
97 98 2.939261 ATGCTGCTTGCCCTGTTGC 61.939 57.895 0.00 0.00 42.00 4.17
98 99 3.608662 GCTGCTTGCCCTGTTGCA 61.609 61.111 0.00 0.00 40.07 4.08
99 100 2.939261 GCTGCTTGCCCTGTTGCAT 61.939 57.895 0.00 0.00 41.70 3.96
100 101 1.214589 CTGCTTGCCCTGTTGCATC 59.785 57.895 0.00 0.00 41.70 3.91
101 102 1.228644 TGCTTGCCCTGTTGCATCT 60.229 52.632 0.00 0.00 41.70 2.90
102 103 0.828762 TGCTTGCCCTGTTGCATCTT 60.829 50.000 0.00 0.00 41.70 2.40
103 104 0.319405 GCTTGCCCTGTTGCATCTTT 59.681 50.000 0.00 0.00 41.70 2.52
104 105 1.938016 GCTTGCCCTGTTGCATCTTTG 60.938 52.381 0.00 0.00 41.70 2.77
113 114 4.883026 GCATCTTTGCCTGCACTG 57.117 55.556 0.00 0.00 43.38 3.66
114 115 2.260247 GCATCTTTGCCTGCACTGA 58.740 52.632 0.00 0.00 43.38 3.41
115 116 0.109412 GCATCTTTGCCTGCACTGAC 60.109 55.000 0.00 0.00 43.38 3.51
116 117 1.531423 CATCTTTGCCTGCACTGACT 58.469 50.000 0.00 0.00 0.00 3.41
117 118 1.199327 CATCTTTGCCTGCACTGACTG 59.801 52.381 0.00 0.00 0.00 3.51
118 119 0.535780 TCTTTGCCTGCACTGACTGG 60.536 55.000 0.00 0.00 0.00 4.00
122 123 3.587095 CCTGCACTGACTGGCATG 58.413 61.111 0.00 0.00 39.65 4.06
123 124 2.697761 CCTGCACTGACTGGCATGC 61.698 63.158 9.90 9.90 39.65 4.06
124 125 1.969589 CTGCACTGACTGGCATGCA 60.970 57.895 21.36 16.17 45.45 3.96
125 126 2.196382 CTGCACTGACTGGCATGCAC 62.196 60.000 21.36 9.64 42.92 4.57
126 127 1.970114 GCACTGACTGGCATGCACT 60.970 57.895 21.36 0.00 38.00 4.40
127 128 1.873863 CACTGACTGGCATGCACTG 59.126 57.895 21.36 14.62 0.00 3.66
136 137 2.745100 CATGCACTGCTCCGCTGT 60.745 61.111 1.98 0.00 41.16 4.40
137 138 2.435586 ATGCACTGCTCCGCTGTC 60.436 61.111 1.98 0.00 38.59 3.51
138 139 2.952293 ATGCACTGCTCCGCTGTCT 61.952 57.895 1.98 0.00 38.59 3.41
139 140 2.358003 GCACTGCTCCGCTGTCTT 60.358 61.111 0.00 0.00 38.59 3.01
140 141 2.675056 GCACTGCTCCGCTGTCTTG 61.675 63.158 0.00 0.00 38.59 3.02
141 142 1.005748 CACTGCTCCGCTGTCTTGA 60.006 57.895 0.00 0.00 38.59 3.02
142 143 0.601046 CACTGCTCCGCTGTCTTGAA 60.601 55.000 0.00 0.00 38.59 2.69
143 144 0.322975 ACTGCTCCGCTGTCTTGAAT 59.677 50.000 0.00 0.00 35.96 2.57
144 145 1.005340 CTGCTCCGCTGTCTTGAATC 58.995 55.000 0.00 0.00 0.00 2.52
145 146 0.321346 TGCTCCGCTGTCTTGAATCA 59.679 50.000 0.00 0.00 0.00 2.57
146 147 1.065926 TGCTCCGCTGTCTTGAATCAT 60.066 47.619 0.00 0.00 0.00 2.45
147 148 1.329906 GCTCCGCTGTCTTGAATCATG 59.670 52.381 0.00 0.00 0.00 3.07
148 149 1.329906 CTCCGCTGTCTTGAATCATGC 59.670 52.381 0.00 0.00 0.00 4.06
149 150 1.089112 CCGCTGTCTTGAATCATGCA 58.911 50.000 0.00 0.00 0.00 3.96
150 151 1.063616 CCGCTGTCTTGAATCATGCAG 59.936 52.381 12.57 12.57 0.00 4.41
151 152 1.531264 CGCTGTCTTGAATCATGCAGC 60.531 52.381 22.61 22.61 43.89 5.25
152 153 1.743958 GCTGTCTTGAATCATGCAGCT 59.256 47.619 23.92 0.00 43.94 4.24
153 154 2.163815 GCTGTCTTGAATCATGCAGCTT 59.836 45.455 23.92 0.00 43.94 3.74
154 155 3.759418 CTGTCTTGAATCATGCAGCTTG 58.241 45.455 1.70 1.70 0.00 4.01
155 156 2.094906 TGTCTTGAATCATGCAGCTTGC 60.095 45.455 3.32 1.70 45.29 4.01
156 157 2.163815 GTCTTGAATCATGCAGCTTGCT 59.836 45.455 3.32 0.00 45.31 3.91
157 158 2.823747 TCTTGAATCATGCAGCTTGCTT 59.176 40.909 3.32 0.21 45.31 3.91
158 159 2.933495 TGAATCATGCAGCTTGCTTC 57.067 45.000 14.84 14.84 45.31 3.86
159 160 2.443416 TGAATCATGCAGCTTGCTTCT 58.557 42.857 19.81 0.52 45.31 2.85
160 161 2.163613 TGAATCATGCAGCTTGCTTCTG 59.836 45.455 19.81 3.50 45.31 3.02
161 162 2.124277 ATCATGCAGCTTGCTTCTGA 57.876 45.000 3.32 9.19 45.31 3.27
162 163 2.124277 TCATGCAGCTTGCTTCTGAT 57.876 45.000 3.32 0.00 45.31 2.90
163 164 2.014857 TCATGCAGCTTGCTTCTGATC 58.985 47.619 3.32 0.00 45.31 2.92
164 165 1.015109 ATGCAGCTTGCTTCTGATCG 58.985 50.000 9.12 0.00 45.31 3.69
165 166 0.037046 TGCAGCTTGCTTCTGATCGA 60.037 50.000 9.12 0.00 45.31 3.59
166 167 1.081892 GCAGCTTGCTTCTGATCGAA 58.918 50.000 0.00 0.00 40.96 3.71
167 168 1.202009 GCAGCTTGCTTCTGATCGAAC 60.202 52.381 0.00 0.00 40.96 3.95
168 169 2.071540 CAGCTTGCTTCTGATCGAACA 58.928 47.619 0.00 0.00 33.54 3.18
169 170 2.676839 CAGCTTGCTTCTGATCGAACAT 59.323 45.455 0.00 0.00 33.54 2.71
170 171 3.867493 CAGCTTGCTTCTGATCGAACATA 59.133 43.478 0.00 0.00 33.54 2.29
171 172 4.510711 CAGCTTGCTTCTGATCGAACATAT 59.489 41.667 0.00 0.00 33.54 1.78
172 173 5.693555 CAGCTTGCTTCTGATCGAACATATA 59.306 40.000 0.00 0.00 33.54 0.86
173 174 5.694006 AGCTTGCTTCTGATCGAACATATAC 59.306 40.000 0.00 0.00 0.00 1.47
174 175 5.694006 GCTTGCTTCTGATCGAACATATACT 59.306 40.000 0.00 0.00 0.00 2.12
175 176 6.863645 GCTTGCTTCTGATCGAACATATACTA 59.136 38.462 0.00 0.00 0.00 1.82
176 177 7.543868 GCTTGCTTCTGATCGAACATATACTAT 59.456 37.037 0.00 0.00 0.00 2.12
177 178 8.748380 TTGCTTCTGATCGAACATATACTATG 57.252 34.615 0.00 0.00 0.00 2.23
178 179 7.315890 TGCTTCTGATCGAACATATACTATGG 58.684 38.462 0.00 0.00 0.00 2.74
179 180 6.254589 GCTTCTGATCGAACATATACTATGGC 59.745 42.308 0.00 0.00 0.00 4.40
180 181 5.880341 TCTGATCGAACATATACTATGGCG 58.120 41.667 0.00 3.19 0.00 5.69
181 182 5.414765 TCTGATCGAACATATACTATGGCGT 59.585 40.000 0.00 0.00 0.00 5.68
182 183 6.596497 TCTGATCGAACATATACTATGGCGTA 59.404 38.462 0.00 0.00 0.00 4.42
183 184 7.120138 TCTGATCGAACATATACTATGGCGTAA 59.880 37.037 0.00 0.00 0.00 3.18
184 185 7.595604 TGATCGAACATATACTATGGCGTAAA 58.404 34.615 0.00 0.00 0.00 2.01
185 186 8.248253 TGATCGAACATATACTATGGCGTAAAT 58.752 33.333 0.00 0.00 0.00 1.40
186 187 7.806149 TCGAACATATACTATGGCGTAAATG 57.194 36.000 9.73 0.00 0.00 2.32
187 188 7.372714 TCGAACATATACTATGGCGTAAATGT 58.627 34.615 9.73 0.00 0.00 2.71
188 189 7.327518 TCGAACATATACTATGGCGTAAATGTG 59.672 37.037 9.73 4.96 0.00 3.21
189 190 7.411480 CGAACATATACTATGGCGTAAATGTGG 60.411 40.741 9.04 2.12 0.00 4.17
190 191 6.170506 ACATATACTATGGCGTAAATGTGGG 58.829 40.000 9.04 0.00 0.00 4.61
191 192 1.675552 ACTATGGCGTAAATGTGGGC 58.324 50.000 0.00 0.00 0.00 5.36
192 193 0.951558 CTATGGCGTAAATGTGGGCC 59.048 55.000 0.00 0.00 45.76 5.80
194 195 3.688086 GGCGTAAATGTGGGCCAA 58.312 55.556 8.40 0.00 44.91 4.52
195 196 1.968310 GGCGTAAATGTGGGCCAAA 59.032 52.632 8.40 1.64 44.91 3.28
196 197 0.389296 GGCGTAAATGTGGGCCAAAC 60.389 55.000 8.40 2.31 44.91 2.93
197 198 0.601057 GCGTAAATGTGGGCCAAACT 59.399 50.000 8.40 0.00 0.00 2.66
198 199 1.668628 GCGTAAATGTGGGCCAAACTG 60.669 52.381 8.40 0.00 0.00 3.16
199 200 1.611491 CGTAAATGTGGGCCAAACTGT 59.389 47.619 8.40 0.00 0.00 3.55
200 201 2.035321 CGTAAATGTGGGCCAAACTGTT 59.965 45.455 8.40 0.49 0.00 3.16
201 202 2.908688 AAATGTGGGCCAAACTGTTC 57.091 45.000 8.40 0.00 0.00 3.18
202 203 1.786937 AATGTGGGCCAAACTGTTCA 58.213 45.000 8.40 0.00 0.00 3.18
203 204 2.014010 ATGTGGGCCAAACTGTTCAT 57.986 45.000 8.40 2.12 0.00 2.57
204 205 1.786937 TGTGGGCCAAACTGTTCATT 58.213 45.000 8.40 0.00 0.00 2.57
205 206 1.411977 TGTGGGCCAAACTGTTCATTG 59.588 47.619 8.40 0.00 0.00 2.82
206 207 1.412343 GTGGGCCAAACTGTTCATTGT 59.588 47.619 8.40 0.00 0.00 2.71
207 208 1.411977 TGGGCCAAACTGTTCATTGTG 59.588 47.619 2.13 0.00 0.00 3.33
208 209 1.412343 GGGCCAAACTGTTCATTGTGT 59.588 47.619 4.39 0.00 0.00 3.72
209 210 2.158971 GGGCCAAACTGTTCATTGTGTT 60.159 45.455 4.39 0.00 0.00 3.32
210 211 3.123050 GGCCAAACTGTTCATTGTGTTC 58.877 45.455 0.00 0.00 0.00 3.18
211 212 3.430098 GGCCAAACTGTTCATTGTGTTCA 60.430 43.478 0.00 0.00 0.00 3.18
212 213 3.551485 GCCAAACTGTTCATTGTGTTCAC 59.449 43.478 0.00 0.00 0.00 3.18
213 214 4.742417 CCAAACTGTTCATTGTGTTCACA 58.258 39.130 1.23 1.23 0.00 3.58
214 215 5.167121 CCAAACTGTTCATTGTGTTCACAA 58.833 37.500 18.46 18.46 0.00 3.33
215 216 5.289193 CCAAACTGTTCATTGTGTTCACAAG 59.711 40.000 20.27 13.56 32.69 3.16
216 217 5.895636 AACTGTTCATTGTGTTCACAAGA 57.104 34.783 20.27 15.14 32.69 3.02
217 218 5.895636 ACTGTTCATTGTGTTCACAAGAA 57.104 34.783 20.27 18.69 32.69 2.52
218 219 6.455360 ACTGTTCATTGTGTTCACAAGAAT 57.545 33.333 20.27 4.85 35.92 2.40
219 220 6.866480 ACTGTTCATTGTGTTCACAAGAATT 58.134 32.000 20.27 4.54 35.92 2.17
220 221 7.322664 ACTGTTCATTGTGTTCACAAGAATTT 58.677 30.769 20.27 4.22 35.92 1.82
221 222 8.465999 ACTGTTCATTGTGTTCACAAGAATTTA 58.534 29.630 20.27 13.29 35.92 1.40
222 223 9.299963 CTGTTCATTGTGTTCACAAGAATTTAA 57.700 29.630 20.27 8.10 35.92 1.52
223 224 9.645059 TGTTCATTGTGTTCACAAGAATTTAAA 57.355 25.926 20.27 0.00 35.92 1.52
247 248 9.700831 AAAATTTCTTCATAACTATAGGCAGGT 57.299 29.630 4.43 0.00 0.00 4.00
248 249 9.700831 AAATTTCTTCATAACTATAGGCAGGTT 57.299 29.630 4.43 0.00 0.00 3.50
251 252 8.548880 TTCTTCATAACTATAGGCAGGTTAGT 57.451 34.615 4.43 0.00 0.00 2.24
252 253 9.650714 TTCTTCATAACTATAGGCAGGTTAGTA 57.349 33.333 4.43 0.00 0.00 1.82
253 254 9.650714 TCTTCATAACTATAGGCAGGTTAGTAA 57.349 33.333 4.43 0.00 0.00 2.24
256 257 9.032624 TCATAACTATAGGCAGGTTAGTAATCC 57.967 37.037 4.43 0.00 0.00 3.01
257 258 8.812972 CATAACTATAGGCAGGTTAGTAATCCA 58.187 37.037 4.43 0.00 0.00 3.41
258 259 6.919775 ACTATAGGCAGGTTAGTAATCCAG 57.080 41.667 4.43 0.00 0.00 3.86
259 260 4.625607 ATAGGCAGGTTAGTAATCCAGC 57.374 45.455 9.10 9.10 35.88 4.85
260 261 1.968704 GGCAGGTTAGTAATCCAGCC 58.031 55.000 16.44 16.44 46.03 4.85
261 262 2.710096 GCAGGTTAGTAATCCAGCCA 57.290 50.000 7.30 0.00 31.51 4.75
262 263 2.999331 GCAGGTTAGTAATCCAGCCAA 58.001 47.619 7.30 0.00 31.51 4.52
263 264 3.352648 GCAGGTTAGTAATCCAGCCAAA 58.647 45.455 7.30 0.00 31.51 3.28
264 265 3.128764 GCAGGTTAGTAATCCAGCCAAAC 59.871 47.826 7.30 0.00 31.51 2.93
265 266 4.331968 CAGGTTAGTAATCCAGCCAAACA 58.668 43.478 0.00 0.00 0.00 2.83
266 267 4.764823 CAGGTTAGTAATCCAGCCAAACAA 59.235 41.667 0.00 0.00 0.00 2.83
267 268 5.242838 CAGGTTAGTAATCCAGCCAAACAAA 59.757 40.000 0.00 0.00 0.00 2.83
268 269 6.016555 AGGTTAGTAATCCAGCCAAACAAAT 58.983 36.000 0.00 0.00 0.00 2.32
269 270 6.071391 AGGTTAGTAATCCAGCCAAACAAATG 60.071 38.462 0.00 0.00 0.00 2.32
270 271 4.806640 AGTAATCCAGCCAAACAAATGG 57.193 40.909 0.00 0.00 43.70 3.16
271 272 4.159557 AGTAATCCAGCCAAACAAATGGT 58.840 39.130 0.00 0.00 42.75 3.55
272 273 5.329399 AGTAATCCAGCCAAACAAATGGTA 58.671 37.500 0.00 0.00 42.75 3.25
273 274 5.777732 AGTAATCCAGCCAAACAAATGGTAA 59.222 36.000 0.00 0.00 42.75 2.85
274 275 5.559148 AATCCAGCCAAACAAATGGTAAA 57.441 34.783 0.00 0.00 42.75 2.01
275 276 5.559148 ATCCAGCCAAACAAATGGTAAAA 57.441 34.783 0.00 0.00 42.75 1.52
276 277 5.559148 TCCAGCCAAACAAATGGTAAAAT 57.441 34.783 0.00 0.00 42.75 1.82
277 278 5.934781 TCCAGCCAAACAAATGGTAAAATT 58.065 33.333 0.00 0.00 42.75 1.82
278 279 6.360618 TCCAGCCAAACAAATGGTAAAATTT 58.639 32.000 0.00 0.00 42.75 1.82
280 281 6.261826 CCAGCCAAACAAATGGTAAAATTTGA 59.738 34.615 14.70 0.00 46.13 2.69
281 282 7.201767 CCAGCCAAACAAATGGTAAAATTTGAA 60.202 33.333 14.70 0.00 46.13 2.69
282 283 7.856894 CAGCCAAACAAATGGTAAAATTTGAAG 59.143 33.333 14.70 5.62 46.13 3.02
283 284 7.555914 AGCCAAACAAATGGTAAAATTTGAAGT 59.444 29.630 14.70 0.01 46.13 3.01
284 285 7.643371 GCCAAACAAATGGTAAAATTTGAAGTG 59.357 33.333 14.70 9.46 46.13 3.16
285 286 8.887717 CCAAACAAATGGTAAAATTTGAAGTGA 58.112 29.630 14.70 0.00 46.13 3.41
337 338 3.128068 CCCTCCGTTTTTGTATACAAGGC 59.872 47.826 17.36 10.99 37.15 4.35
358 359 5.826737 AGGCCACTATCTCATTTTTCAGATG 59.173 40.000 5.01 0.00 0.00 2.90
439 440 4.593206 TCTCTCATGTTCCGGGCTAATTAT 59.407 41.667 0.00 0.00 0.00 1.28
440 441 5.071788 TCTCTCATGTTCCGGGCTAATTATT 59.928 40.000 0.00 0.00 0.00 1.40
441 442 5.690865 TCTCATGTTCCGGGCTAATTATTT 58.309 37.500 0.00 0.00 0.00 1.40
442 443 6.126409 TCTCATGTTCCGGGCTAATTATTTT 58.874 36.000 0.00 0.00 0.00 1.82
497 498 8.430063 GCTGCATGCAACATATTCATTAATAAC 58.570 33.333 22.88 0.00 42.31 1.89
916 930 9.143631 ACTGCTAATAAATTGTTCTTTTGATGC 57.856 29.630 0.00 0.00 0.00 3.91
1417 1433 9.819267 AACTAAATAAGCACTAATGACTACTCC 57.181 33.333 0.00 0.00 0.00 3.85
1418 1434 8.422566 ACTAAATAAGCACTAATGACTACTCCC 58.577 37.037 0.00 0.00 0.00 4.30
1419 1435 7.439108 AAATAAGCACTAATGACTACTCCCT 57.561 36.000 0.00 0.00 0.00 4.20
1420 1436 6.658188 ATAAGCACTAATGACTACTCCCTC 57.342 41.667 0.00 0.00 0.00 4.30
1421 1437 3.301274 AGCACTAATGACTACTCCCTCC 58.699 50.000 0.00 0.00 0.00 4.30
1422 1438 2.034812 GCACTAATGACTACTCCCTCCG 59.965 54.545 0.00 0.00 0.00 4.63
1423 1439 3.288964 CACTAATGACTACTCCCTCCGT 58.711 50.000 0.00 0.00 0.00 4.69
1424 1440 3.315749 CACTAATGACTACTCCCTCCGTC 59.684 52.174 0.00 0.00 0.00 4.79
1425 1441 1.777941 AATGACTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
1426 1442 0.465824 ATGACTACTCCCTCCGTCCG 60.466 60.000 0.00 0.00 0.00 4.79
1427 1443 1.823041 GACTACTCCCTCCGTCCGG 60.823 68.421 0.00 0.00 0.00 5.14
1428 1444 2.262774 GACTACTCCCTCCGTCCGGA 62.263 65.000 0.00 0.00 42.90 5.14
1429 1445 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
1430 1446 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
1431 1447 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
1432 1448 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
1433 1449 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
1434 1450 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
1435 1451 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
1436 1452 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1437 1453 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1438 1454 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1439 1455 1.205417 TCCGTCCGGAAATACTTGTCC 59.795 52.381 5.23 0.00 42.05 4.02
1440 1456 1.206371 CCGTCCGGAAATACTTGTCCT 59.794 52.381 5.23 0.00 37.50 3.85
1441 1457 2.354403 CCGTCCGGAAATACTTGTCCTT 60.354 50.000 5.23 0.00 37.50 3.36
1442 1458 2.671396 CGTCCGGAAATACTTGTCCTTG 59.329 50.000 5.23 0.00 0.00 3.61
1443 1459 3.615592 CGTCCGGAAATACTTGTCCTTGA 60.616 47.826 5.23 0.00 0.00 3.02
1444 1460 4.320870 GTCCGGAAATACTTGTCCTTGAA 58.679 43.478 5.23 0.00 0.00 2.69
1445 1461 4.758165 GTCCGGAAATACTTGTCCTTGAAA 59.242 41.667 5.23 0.00 0.00 2.69
1446 1462 5.414765 GTCCGGAAATACTTGTCCTTGAAAT 59.585 40.000 5.23 0.00 0.00 2.17
1447 1463 5.414454 TCCGGAAATACTTGTCCTTGAAATG 59.586 40.000 0.00 0.00 0.00 2.32
1448 1464 5.393027 CCGGAAATACTTGTCCTTGAAATGG 60.393 44.000 0.00 0.00 0.00 3.16
1449 1465 5.183140 CGGAAATACTTGTCCTTGAAATGGT 59.817 40.000 0.00 0.00 31.98 3.55
1450 1466 6.294508 CGGAAATACTTGTCCTTGAAATGGTT 60.295 38.462 0.00 0.00 31.98 3.67
1451 1467 6.868339 GGAAATACTTGTCCTTGAAATGGTTG 59.132 38.462 0.00 0.00 31.98 3.77
1452 1468 6.976934 AATACTTGTCCTTGAAATGGTTGT 57.023 33.333 0.00 0.00 31.98 3.32
1453 1469 8.472007 AAATACTTGTCCTTGAAATGGTTGTA 57.528 30.769 0.00 0.00 31.98 2.41
1454 1470 8.650143 AATACTTGTCCTTGAAATGGTTGTAT 57.350 30.769 0.00 0.00 31.98 2.29
1455 1471 6.575162 ACTTGTCCTTGAAATGGTTGTATC 57.425 37.500 0.00 0.00 31.98 2.24
1456 1472 6.306987 ACTTGTCCTTGAAATGGTTGTATCT 58.693 36.000 0.00 0.00 31.98 1.98
1457 1473 7.458397 ACTTGTCCTTGAAATGGTTGTATCTA 58.542 34.615 0.00 0.00 31.98 1.98
1458 1474 7.607991 ACTTGTCCTTGAAATGGTTGTATCTAG 59.392 37.037 0.00 0.00 31.98 2.43
1459 1475 7.252612 TGTCCTTGAAATGGTTGTATCTAGA 57.747 36.000 0.00 0.00 31.98 2.43
1460 1476 7.103641 TGTCCTTGAAATGGTTGTATCTAGAC 58.896 38.462 0.00 0.00 31.98 2.59
1461 1477 7.038302 TGTCCTTGAAATGGTTGTATCTAGACT 60.038 37.037 0.00 0.00 31.98 3.24
1462 1478 7.824779 GTCCTTGAAATGGTTGTATCTAGACTT 59.175 37.037 0.00 0.00 31.98 3.01
1463 1479 9.042450 TCCTTGAAATGGTTGTATCTAGACTTA 57.958 33.333 0.00 0.00 31.98 2.24
1464 1480 9.838339 CCTTGAAATGGTTGTATCTAGACTTAT 57.162 33.333 0.00 0.00 0.00 1.73
1499 1515 8.827832 AGATACATCCATTTTCTCCATTTTGA 57.172 30.769 0.00 0.00 0.00 2.69
1500 1516 9.258629 AGATACATCCATTTTCTCCATTTTGAA 57.741 29.630 0.00 0.00 0.00 2.69
1501 1517 9.525409 GATACATCCATTTTCTCCATTTTGAAG 57.475 33.333 0.00 0.00 0.00 3.02
1502 1518 7.543359 ACATCCATTTTCTCCATTTTGAAGA 57.457 32.000 0.00 0.00 0.00 2.87
1503 1519 7.381323 ACATCCATTTTCTCCATTTTGAAGAC 58.619 34.615 0.00 0.00 0.00 3.01
1504 1520 6.975196 TCCATTTTCTCCATTTTGAAGACA 57.025 33.333 0.00 0.00 0.00 3.41
1505 1521 7.358770 TCCATTTTCTCCATTTTGAAGACAA 57.641 32.000 0.00 0.00 0.00 3.18
1506 1522 7.436118 TCCATTTTCTCCATTTTGAAGACAAG 58.564 34.615 0.00 0.00 37.32 3.16
1507 1523 7.069826 TCCATTTTCTCCATTTTGAAGACAAGT 59.930 33.333 0.00 0.00 37.32 3.16
1508 1524 8.359642 CCATTTTCTCCATTTTGAAGACAAGTA 58.640 33.333 0.00 0.00 37.32 2.24
1509 1525 9.918630 CATTTTCTCCATTTTGAAGACAAGTAT 57.081 29.630 0.00 0.00 37.32 2.12
1512 1528 9.965824 TTTCTCCATTTTGAAGACAAGTATTTC 57.034 29.630 0.00 0.00 37.32 2.17
1513 1529 8.110860 TCTCCATTTTGAAGACAAGTATTTCC 57.889 34.615 0.00 0.00 37.32 3.13
1514 1530 6.908825 TCCATTTTGAAGACAAGTATTTCCG 58.091 36.000 0.00 0.00 37.32 4.30
1515 1531 6.072175 TCCATTTTGAAGACAAGTATTTCCGG 60.072 38.462 0.00 0.00 37.32 5.14
1516 1532 6.072175 CCATTTTGAAGACAAGTATTTCCGGA 60.072 38.462 0.00 0.00 37.32 5.14
1517 1533 5.934935 TTTGAAGACAAGTATTTCCGGAC 57.065 39.130 1.83 0.00 37.32 4.79
1518 1534 3.581755 TGAAGACAAGTATTTCCGGACG 58.418 45.455 1.83 0.00 0.00 4.79
1519 1535 2.667473 AGACAAGTATTTCCGGACGG 57.333 50.000 1.83 3.96 0.00 4.79
1520 1536 2.173519 AGACAAGTATTTCCGGACGGA 58.826 47.619 1.83 9.76 43.52 4.69
1521 1537 2.165845 AGACAAGTATTTCCGGACGGAG 59.834 50.000 13.64 3.15 46.06 4.63
1522 1538 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
1523 1539 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
1524 1540 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
1525 1541 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
1526 1542 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
1527 1543 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
1528 1544 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
1529 1545 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
1828 2279 3.330701 TCAGCTACCAACAAAATCCTCCT 59.669 43.478 0.00 0.00 0.00 3.69
1851 2302 1.202879 TGATTTCTTGCCGGGACAAGT 60.203 47.619 22.07 10.13 45.86 3.16
1904 2355 3.070018 CAAGTGCGTCAAGAAAGATCCT 58.930 45.455 0.00 0.00 0.00 3.24
2562 3015 2.554032 GTGTTGTCTTCACCATCTTGGG 59.446 50.000 0.00 0.00 43.37 4.12
3268 3725 3.943381 CACAGAACATGACACCAGCATAT 59.057 43.478 0.00 0.00 0.00 1.78
3301 3758 5.778862 ACAAAAGCACATTTAATACCGCTT 58.221 33.333 0.00 0.00 41.22 4.68
3346 3806 2.257894 GAGCAGATCACGAGACAACAG 58.742 52.381 0.00 0.00 0.00 3.16
3352 3812 0.744281 TCACGAGACAACAGTCAGCA 59.256 50.000 0.00 0.00 34.69 4.41
3596 4065 2.674796 ATAAAGAGCGTGGTGACTCC 57.325 50.000 0.00 0.00 33.18 3.85
3905 4404 2.608623 AGGTGATGTTTTTCAAGGGGG 58.391 47.619 0.00 0.00 0.00 5.40
3960 4459 7.609960 TCCATTGCATATTTTCAGCTTTGTTA 58.390 30.769 0.00 0.00 0.00 2.41
3982 4481 7.816995 TGTTAACAAAATATGAAATCTGGTGCC 59.183 33.333 5.64 0.00 0.00 5.01
4011 4510 0.108804 TAAAGCGAGGAAGAGGTGCG 60.109 55.000 0.00 0.00 0.00 5.34
4029 4528 0.105039 CGGTTGGCTCTAGGATGGAC 59.895 60.000 0.00 0.00 0.00 4.02
4104 4603 3.650139 CCCGGATATACGTTTGGAAGAG 58.350 50.000 0.73 0.00 0.00 2.85
4147 4646 1.376037 CCGGAGAGGCCACTGTTTC 60.376 63.158 7.70 0.00 35.94 2.78
4164 4663 3.261897 TGTTTCTGAGATCCAAGTCTCCC 59.738 47.826 1.84 0.00 43.17 4.30
4216 4718 2.408271 TAAGCCATCCAGCTCTTGTG 57.592 50.000 0.00 0.00 44.11 3.33
4217 4719 0.694771 AAGCCATCCAGCTCTTGTGA 59.305 50.000 0.00 0.00 44.11 3.58
4218 4720 0.252479 AGCCATCCAGCTCTTGTGAG 59.748 55.000 0.00 0.00 39.48 3.51
4253 4755 7.154656 CACAGGAAGAAGGAAAATAAAAAGGG 58.845 38.462 0.00 0.00 0.00 3.95
4262 4764 6.436027 AGGAAAATAAAAAGGGGAGGAGATC 58.564 40.000 0.00 0.00 0.00 2.75
4263 4765 5.299531 GGAAAATAAAAAGGGGAGGAGATCG 59.700 44.000 0.00 0.00 0.00 3.69
4264 4766 5.452341 AAATAAAAAGGGGAGGAGATCGT 57.548 39.130 0.00 0.00 0.00 3.73
4324 4826 3.818787 CCAAGCATCGGCACTGCC 61.819 66.667 10.35 10.35 46.75 4.85
4371 5297 1.039233 GGGAGTGATGTGCCCCATTG 61.039 60.000 0.00 0.00 38.69 2.82
4390 5316 6.071952 CCCATTGCTGAACTACAATTTGTACT 60.072 38.462 5.14 0.00 34.32 2.73
4391 5317 7.120579 CCCATTGCTGAACTACAATTTGTACTA 59.879 37.037 5.14 0.00 34.32 1.82
4392 5318 7.962918 CCATTGCTGAACTACAATTTGTACTAC 59.037 37.037 5.14 1.39 34.32 2.73
4394 5320 8.615878 TTGCTGAACTACAATTTGTACTACAT 57.384 30.769 5.14 0.00 0.00 2.29
4408 5335 8.842358 TTTGTACTACATAAGAAAGGGTTCTG 57.158 34.615 0.00 0.00 43.59 3.02
4430 5357 5.491070 TGTGTTACTGAAAGATGCTGCTAT 58.509 37.500 0.00 0.00 37.43 2.97
4431 5358 5.939883 TGTGTTACTGAAAGATGCTGCTATT 59.060 36.000 0.00 0.00 37.43 1.73
4432 5359 6.128200 TGTGTTACTGAAAGATGCTGCTATTG 60.128 38.462 0.00 0.00 37.43 1.90
4497 5454 1.852067 GCACTGTGCCCCGTGTTTAG 61.852 60.000 21.78 0.00 37.42 1.85
4516 5479 6.484977 TGTTTAGACATGTTATGTGTTGCTCA 59.515 34.615 0.00 0.00 45.03 4.26
4557 5524 5.651139 GCCTATAACATGATTGGCATCTGAT 59.349 40.000 12.82 0.00 44.32 2.90
4558 5525 6.404403 GCCTATAACATGATTGGCATCTGATG 60.404 42.308 13.26 13.26 44.32 3.07
4559 5526 6.882678 CCTATAACATGATTGGCATCTGATGA 59.117 38.462 21.30 0.78 34.15 2.92
4560 5527 6.819397 ATAACATGATTGGCATCTGATGAG 57.181 37.500 21.30 0.00 34.15 2.90
4561 5528 4.432980 ACATGATTGGCATCTGATGAGA 57.567 40.909 21.30 6.21 34.15 3.27
4596 5565 2.299993 TCGCTTCTGTGACATGATCC 57.700 50.000 0.00 0.00 0.00 3.36
4663 6502 2.498441 TGGTTATAGTCCATTGCCCCT 58.502 47.619 0.00 0.00 0.00 4.79
4673 6512 0.390860 CATTGCCCCTAGAGACCGAG 59.609 60.000 0.00 0.00 0.00 4.63
4682 6521 1.135333 CTAGAGACCGAGGCTTGAACC 59.865 57.143 2.43 0.00 0.00 3.62
4762 6606 0.178961 GGAGTTTGGACCAAGGCCTT 60.179 55.000 13.78 13.78 0.00 4.35
4919 9057 7.551035 TGAACCAAATTTGTTGAATTCAAGG 57.449 32.000 21.05 17.67 36.96 3.61
4962 9100 5.817816 CCAATTCCGGCCAGTATATATTCTC 59.182 44.000 2.24 0.00 0.00 2.87
4964 9102 4.055710 TCCGGCCAGTATATATTCTCCA 57.944 45.455 2.24 0.00 0.00 3.86
4965 9103 3.767673 TCCGGCCAGTATATATTCTCCAC 59.232 47.826 2.24 0.00 0.00 4.02
4966 9104 3.118738 CCGGCCAGTATATATTCTCCACC 60.119 52.174 2.24 0.00 0.00 4.61
5091 9263 2.858344 CTGTTATCGAAACCCTACTGCG 59.142 50.000 0.00 0.00 0.00 5.18
5115 9292 1.132834 TGTGCTCGGCAATGCTATTTG 59.867 47.619 4.82 0.00 41.47 2.32
5120 9297 3.791353 GCTCGGCAATGCTATTTGTTTAC 59.209 43.478 4.82 0.00 0.00 2.01
5192 9369 8.682936 TTCTAAGAAATAGAATCCTCCAATGC 57.317 34.615 0.00 0.00 43.99 3.56
5241 9418 3.647590 AGGAAATCAAGCAATGGGTGTTT 59.352 39.130 0.00 0.00 0.00 2.83
5279 9456 5.598416 AAAAAGAGGGACCAAAAGACTTG 57.402 39.130 0.00 0.00 0.00 3.16
5299 9476 5.799936 ACTTGTGAACGTCTTTGAACATTTG 59.200 36.000 0.00 0.00 0.00 2.32
5319 9499 1.108727 CAGGTTGCTCCAACAGGCAA 61.109 55.000 9.93 0.00 45.11 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.390991 GGCTCTCTTGAACAAATAAACGGAG 60.391 44.000 0.00 0.00 0.00 4.63
7 8 4.454504 GGCTCTCTTGAACAAATAAACGGA 59.545 41.667 0.00 0.00 0.00 4.69
8 9 4.379499 GGGCTCTCTTGAACAAATAAACGG 60.379 45.833 0.00 0.00 0.00 4.44
9 10 4.215399 TGGGCTCTCTTGAACAAATAAACG 59.785 41.667 0.00 0.00 0.00 3.60
10 11 5.009610 TGTGGGCTCTCTTGAACAAATAAAC 59.990 40.000 0.00 0.00 0.00 2.01
11 12 5.136828 TGTGGGCTCTCTTGAACAAATAAA 58.863 37.500 0.00 0.00 0.00 1.40
12 13 4.724399 TGTGGGCTCTCTTGAACAAATAA 58.276 39.130 0.00 0.00 0.00 1.40
13 14 4.365514 TGTGGGCTCTCTTGAACAAATA 57.634 40.909 0.00 0.00 0.00 1.40
14 15 3.228188 TGTGGGCTCTCTTGAACAAAT 57.772 42.857 0.00 0.00 0.00 2.32
15 16 2.727123 TGTGGGCTCTCTTGAACAAA 57.273 45.000 0.00 0.00 0.00 2.83
16 17 2.553028 GGATGTGGGCTCTCTTGAACAA 60.553 50.000 0.00 0.00 0.00 2.83
17 18 1.003580 GGATGTGGGCTCTCTTGAACA 59.996 52.381 0.00 0.00 0.00 3.18
18 19 1.743996 GGATGTGGGCTCTCTTGAAC 58.256 55.000 0.00 0.00 0.00 3.18
19 20 0.250234 CGGATGTGGGCTCTCTTGAA 59.750 55.000 0.00 0.00 0.00 2.69
20 21 0.614697 TCGGATGTGGGCTCTCTTGA 60.615 55.000 0.00 0.00 0.00 3.02
21 22 0.179089 CTCGGATGTGGGCTCTCTTG 60.179 60.000 0.00 0.00 0.00 3.02
22 23 1.965754 GCTCGGATGTGGGCTCTCTT 61.966 60.000 0.00 0.00 0.00 2.85
23 24 2.430610 GCTCGGATGTGGGCTCTCT 61.431 63.158 0.00 0.00 0.00 3.10
24 25 2.037620 ATGCTCGGATGTGGGCTCTC 62.038 60.000 0.00 0.00 0.00 3.20
25 26 2.037620 GATGCTCGGATGTGGGCTCT 62.038 60.000 0.00 0.00 0.00 4.09
26 27 1.596477 GATGCTCGGATGTGGGCTC 60.596 63.158 0.00 0.00 0.00 4.70
27 28 2.369633 TGATGCTCGGATGTGGGCT 61.370 57.895 0.00 0.00 0.00 5.19
28 29 2.182842 GTGATGCTCGGATGTGGGC 61.183 63.158 0.00 0.00 0.00 5.36
29 30 1.524621 GGTGATGCTCGGATGTGGG 60.525 63.158 0.00 0.00 0.00 4.61
30 31 0.752658 TAGGTGATGCTCGGATGTGG 59.247 55.000 0.00 0.00 0.00 4.17
31 32 1.136891 TGTAGGTGATGCTCGGATGTG 59.863 52.381 0.00 0.00 0.00 3.21
32 33 1.137086 GTGTAGGTGATGCTCGGATGT 59.863 52.381 0.00 0.00 0.00 3.06
33 34 1.539065 GGTGTAGGTGATGCTCGGATG 60.539 57.143 0.00 0.00 0.00 3.51
34 35 0.753262 GGTGTAGGTGATGCTCGGAT 59.247 55.000 0.00 0.00 0.00 4.18
35 36 0.324368 AGGTGTAGGTGATGCTCGGA 60.324 55.000 0.00 0.00 0.00 4.55
36 37 0.537188 AAGGTGTAGGTGATGCTCGG 59.463 55.000 0.00 0.00 0.00 4.63
37 38 1.066858 ACAAGGTGTAGGTGATGCTCG 60.067 52.381 0.00 0.00 0.00 5.03
38 39 2.622436 GACAAGGTGTAGGTGATGCTC 58.378 52.381 0.00 0.00 0.00 4.26
39 40 1.066858 CGACAAGGTGTAGGTGATGCT 60.067 52.381 0.00 0.00 0.00 3.79
40 41 1.067142 TCGACAAGGTGTAGGTGATGC 60.067 52.381 0.00 0.00 0.00 3.91
41 42 2.231478 AGTCGACAAGGTGTAGGTGATG 59.769 50.000 19.50 0.00 0.00 3.07
42 43 2.492484 GAGTCGACAAGGTGTAGGTGAT 59.508 50.000 19.50 0.00 0.00 3.06
43 44 1.884579 GAGTCGACAAGGTGTAGGTGA 59.115 52.381 19.50 0.00 0.00 4.02
44 45 1.401148 CGAGTCGACAAGGTGTAGGTG 60.401 57.143 19.50 0.00 0.00 4.00
45 46 0.879765 CGAGTCGACAAGGTGTAGGT 59.120 55.000 19.50 0.00 0.00 3.08
46 47 1.162698 TCGAGTCGACAAGGTGTAGG 58.837 55.000 19.50 0.00 0.00 3.18
47 48 2.414293 CCTTCGAGTCGACAAGGTGTAG 60.414 54.545 20.61 11.23 34.89 2.74
48 49 1.538512 CCTTCGAGTCGACAAGGTGTA 59.461 52.381 20.61 2.62 34.89 2.90
49 50 0.314302 CCTTCGAGTCGACAAGGTGT 59.686 55.000 20.61 0.00 34.89 4.16
50 51 0.388649 CCCTTCGAGTCGACAAGGTG 60.389 60.000 24.76 15.74 33.52 4.00
51 52 0.538977 TCCCTTCGAGTCGACAAGGT 60.539 55.000 24.76 3.80 33.52 3.50
52 53 0.109226 GTCCCTTCGAGTCGACAAGG 60.109 60.000 21.56 21.56 34.89 3.61
53 54 0.109226 GGTCCCTTCGAGTCGACAAG 60.109 60.000 16.28 11.03 34.89 3.16
54 55 0.824595 TGGTCCCTTCGAGTCGACAA 60.825 55.000 16.28 0.00 34.89 3.18
55 56 1.228337 TGGTCCCTTCGAGTCGACA 60.228 57.895 16.28 5.92 34.89 4.35
56 57 0.959372 TCTGGTCCCTTCGAGTCGAC 60.959 60.000 16.28 7.70 34.89 4.20
57 58 0.034380 ATCTGGTCCCTTCGAGTCGA 60.034 55.000 12.09 12.09 0.00 4.20
58 59 0.382515 GATCTGGTCCCTTCGAGTCG 59.617 60.000 6.09 6.09 0.00 4.18
59 60 0.747852 GGATCTGGTCCCTTCGAGTC 59.252 60.000 0.00 0.00 41.50 3.36
60 61 2.903404 GGATCTGGTCCCTTCGAGT 58.097 57.895 0.00 0.00 41.50 4.18
69 70 1.022735 CAAGCAGCATGGATCTGGTC 58.977 55.000 4.34 0.00 40.91 4.02
70 71 1.035932 GCAAGCAGCATGGATCTGGT 61.036 55.000 0.00 0.00 44.79 4.00
71 72 1.734137 GCAAGCAGCATGGATCTGG 59.266 57.895 0.00 0.00 44.79 3.86
81 82 3.608662 TGCAACAGGGCAAGCAGC 61.609 61.111 0.00 0.00 41.65 5.25
97 98 1.199327 CAGTCAGTGCAGGCAAAGATG 59.801 52.381 0.00 0.00 0.00 2.90
98 99 1.531423 CAGTCAGTGCAGGCAAAGAT 58.469 50.000 0.00 0.00 0.00 2.40
99 100 0.535780 CCAGTCAGTGCAGGCAAAGA 60.536 55.000 0.00 0.00 0.00 2.52
100 101 1.954528 CCAGTCAGTGCAGGCAAAG 59.045 57.895 0.00 0.00 0.00 2.77
101 102 2.195567 GCCAGTCAGTGCAGGCAAA 61.196 57.895 13.47 0.00 46.26 3.68
102 103 2.595463 GCCAGTCAGTGCAGGCAA 60.595 61.111 13.47 0.00 46.26 4.52
105 106 2.697761 GCATGCCAGTCAGTGCAGG 61.698 63.158 6.36 0.00 41.46 4.85
106 107 1.969589 TGCATGCCAGTCAGTGCAG 60.970 57.895 16.68 0.00 42.13 4.41
107 108 2.113562 TGCATGCCAGTCAGTGCA 59.886 55.556 16.68 0.00 44.50 4.57
108 109 1.970114 AGTGCATGCCAGTCAGTGC 60.970 57.895 16.68 0.00 38.05 4.40
109 110 1.873863 CAGTGCATGCCAGTCAGTG 59.126 57.895 16.68 5.28 0.00 3.66
110 111 4.391869 CAGTGCATGCCAGTCAGT 57.608 55.556 16.68 0.00 0.00 3.41
128 129 1.329906 GCATGATTCAAGACAGCGGAG 59.670 52.381 0.00 0.00 0.00 4.63
129 130 1.338960 TGCATGATTCAAGACAGCGGA 60.339 47.619 0.00 0.00 0.00 5.54
130 131 1.063616 CTGCATGATTCAAGACAGCGG 59.936 52.381 0.00 0.00 0.00 5.52
131 132 1.531264 GCTGCATGATTCAAGACAGCG 60.531 52.381 17.60 5.29 40.83 5.18
132 133 2.190325 GCTGCATGATTCAAGACAGC 57.810 50.000 17.60 17.60 43.09 4.40
133 134 3.759418 CAAGCTGCATGATTCAAGACAG 58.241 45.455 1.02 8.71 0.00 3.51
134 135 2.094906 GCAAGCTGCATGATTCAAGACA 60.095 45.455 9.32 0.00 44.26 3.41
135 136 2.527100 GCAAGCTGCATGATTCAAGAC 58.473 47.619 9.32 0.00 44.26 3.01
136 137 2.933495 GCAAGCTGCATGATTCAAGA 57.067 45.000 9.32 0.00 44.26 3.02
147 148 1.081892 TTCGATCAGAAGCAAGCTGC 58.918 50.000 0.00 0.00 45.46 5.25
148 149 2.071540 TGTTCGATCAGAAGCAAGCTG 58.928 47.619 0.00 0.00 39.95 4.24
149 150 2.462456 TGTTCGATCAGAAGCAAGCT 57.538 45.000 0.00 0.00 39.95 3.74
150 151 5.694006 AGTATATGTTCGATCAGAAGCAAGC 59.306 40.000 2.21 0.00 39.95 4.01
151 152 8.858186 CATAGTATATGTTCGATCAGAAGCAAG 58.142 37.037 2.21 0.00 39.95 4.01
152 153 7.814587 CCATAGTATATGTTCGATCAGAAGCAA 59.185 37.037 2.21 0.00 39.95 3.91
153 154 7.315890 CCATAGTATATGTTCGATCAGAAGCA 58.684 38.462 2.21 0.51 39.95 3.91
154 155 6.254589 GCCATAGTATATGTTCGATCAGAAGC 59.745 42.308 2.21 0.00 39.95 3.86
155 156 6.470556 CGCCATAGTATATGTTCGATCAGAAG 59.529 42.308 2.21 0.00 39.95 2.85
156 157 6.072119 ACGCCATAGTATATGTTCGATCAGAA 60.072 38.462 2.21 0.00 36.31 3.02
157 158 5.414765 ACGCCATAGTATATGTTCGATCAGA 59.585 40.000 2.21 0.00 0.00 3.27
158 159 5.641709 ACGCCATAGTATATGTTCGATCAG 58.358 41.667 2.21 0.00 0.00 2.90
159 160 5.638596 ACGCCATAGTATATGTTCGATCA 57.361 39.130 0.00 0.00 0.00 2.92
160 161 8.532341 CATTTACGCCATAGTATATGTTCGATC 58.468 37.037 12.47 0.00 33.97 3.69
161 162 8.033038 ACATTTACGCCATAGTATATGTTCGAT 58.967 33.333 12.47 4.05 42.41 3.59
162 163 7.327518 CACATTTACGCCATAGTATATGTTCGA 59.672 37.037 9.38 0.00 42.41 3.71
163 164 7.411480 CCACATTTACGCCATAGTATATGTTCG 60.411 40.741 9.38 6.96 42.41 3.95
164 165 7.148474 CCCACATTTACGCCATAGTATATGTTC 60.148 40.741 9.38 0.00 42.41 3.18
165 166 6.653320 CCCACATTTACGCCATAGTATATGTT 59.347 38.462 9.38 0.00 42.41 2.71
166 167 6.170506 CCCACATTTACGCCATAGTATATGT 58.829 40.000 7.18 7.18 44.29 2.29
167 168 5.064707 GCCCACATTTACGCCATAGTATATG 59.935 44.000 6.19 6.19 39.92 1.78
168 169 5.183228 GCCCACATTTACGCCATAGTATAT 58.817 41.667 0.00 0.00 0.00 0.86
169 170 4.563993 GGCCCACATTTACGCCATAGTATA 60.564 45.833 0.00 0.00 41.25 1.47
170 171 3.408634 GCCCACATTTACGCCATAGTAT 58.591 45.455 0.00 0.00 0.00 2.12
171 172 2.485835 GGCCCACATTTACGCCATAGTA 60.486 50.000 0.00 0.00 41.25 1.82
172 173 1.675552 GCCCACATTTACGCCATAGT 58.324 50.000 0.00 0.00 0.00 2.12
173 174 0.951558 GGCCCACATTTACGCCATAG 59.048 55.000 0.00 0.00 41.25 2.23
174 175 0.256177 TGGCCCACATTTACGCCATA 59.744 50.000 0.00 0.00 46.26 2.74
175 176 1.000270 TGGCCCACATTTACGCCAT 60.000 52.632 0.00 0.00 46.26 4.40
177 178 0.389296 GTTTGGCCCACATTTACGCC 60.389 55.000 0.00 0.00 41.99 5.68
178 179 0.601057 AGTTTGGCCCACATTTACGC 59.399 50.000 0.00 0.00 0.00 4.42
179 180 1.611491 ACAGTTTGGCCCACATTTACG 59.389 47.619 0.00 0.00 0.00 3.18
180 181 3.068873 TGAACAGTTTGGCCCACATTTAC 59.931 43.478 0.00 0.00 0.00 2.01
181 182 3.300388 TGAACAGTTTGGCCCACATTTA 58.700 40.909 0.00 0.00 0.00 1.40
182 183 2.114616 TGAACAGTTTGGCCCACATTT 58.885 42.857 0.00 0.00 0.00 2.32
183 184 1.786937 TGAACAGTTTGGCCCACATT 58.213 45.000 0.00 0.00 0.00 2.71
184 185 2.014010 ATGAACAGTTTGGCCCACAT 57.986 45.000 0.00 0.00 0.00 3.21
185 186 1.411977 CAATGAACAGTTTGGCCCACA 59.588 47.619 0.00 0.00 0.00 4.17
186 187 1.412343 ACAATGAACAGTTTGGCCCAC 59.588 47.619 0.00 0.00 0.00 4.61
187 188 1.411977 CACAATGAACAGTTTGGCCCA 59.588 47.619 0.00 0.00 0.00 5.36
188 189 1.412343 ACACAATGAACAGTTTGGCCC 59.588 47.619 0.00 0.00 0.00 5.80
189 190 2.888834 ACACAATGAACAGTTTGGCC 57.111 45.000 0.00 0.00 0.00 5.36
190 191 3.551485 GTGAACACAATGAACAGTTTGGC 59.449 43.478 0.00 0.00 0.00 4.52
191 192 4.742417 TGTGAACACAATGAACAGTTTGG 58.258 39.130 5.11 0.00 38.56 3.28
221 222 9.700831 ACCTGCCTATAGTTATGAAGAAATTTT 57.299 29.630 0.00 0.00 0.00 1.82
222 223 9.700831 AACCTGCCTATAGTTATGAAGAAATTT 57.299 29.630 0.00 0.00 0.00 1.82
225 226 8.989131 ACTAACCTGCCTATAGTTATGAAGAAA 58.011 33.333 0.00 0.00 0.00 2.52
226 227 8.548880 ACTAACCTGCCTATAGTTATGAAGAA 57.451 34.615 0.00 0.00 0.00 2.52
227 228 9.650714 TTACTAACCTGCCTATAGTTATGAAGA 57.349 33.333 0.00 0.00 32.44 2.87
230 231 9.032624 GGATTACTAACCTGCCTATAGTTATGA 57.967 37.037 0.00 0.00 32.44 2.15
231 232 8.812972 TGGATTACTAACCTGCCTATAGTTATG 58.187 37.037 0.00 0.00 32.44 1.90
232 233 8.967779 TGGATTACTAACCTGCCTATAGTTAT 57.032 34.615 0.00 0.00 32.44 1.89
233 234 7.039223 GCTGGATTACTAACCTGCCTATAGTTA 60.039 40.741 0.00 0.00 42.49 2.24
234 235 6.239629 GCTGGATTACTAACCTGCCTATAGTT 60.240 42.308 0.00 0.00 42.49 2.24
235 236 5.246429 GCTGGATTACTAACCTGCCTATAGT 59.754 44.000 0.00 0.00 42.49 2.12
236 237 5.725362 GCTGGATTACTAACCTGCCTATAG 58.275 45.833 0.00 0.00 42.49 1.31
237 238 5.740290 GCTGGATTACTAACCTGCCTATA 57.260 43.478 0.00 0.00 42.49 1.31
238 239 4.625607 GCTGGATTACTAACCTGCCTAT 57.374 45.455 0.00 0.00 42.49 2.57
242 243 2.710096 TGGCTGGATTACTAACCTGC 57.290 50.000 0.00 0.00 45.75 4.85
243 244 4.331968 TGTTTGGCTGGATTACTAACCTG 58.668 43.478 0.00 0.00 0.00 4.00
244 245 4.650972 TGTTTGGCTGGATTACTAACCT 57.349 40.909 0.00 0.00 0.00 3.50
245 246 5.715434 TTTGTTTGGCTGGATTACTAACC 57.285 39.130 0.00 0.00 0.00 2.85
246 247 6.099341 CCATTTGTTTGGCTGGATTACTAAC 58.901 40.000 0.00 0.00 0.00 2.34
247 248 5.777732 ACCATTTGTTTGGCTGGATTACTAA 59.222 36.000 0.00 0.00 40.68 2.24
248 249 5.329399 ACCATTTGTTTGGCTGGATTACTA 58.671 37.500 0.00 0.00 40.68 1.82
249 250 4.159557 ACCATTTGTTTGGCTGGATTACT 58.840 39.130 0.00 0.00 40.68 2.24
250 251 4.535526 ACCATTTGTTTGGCTGGATTAC 57.464 40.909 0.00 0.00 40.68 1.89
251 252 6.672266 TTTACCATTTGTTTGGCTGGATTA 57.328 33.333 0.00 0.00 40.68 1.75
252 253 5.559148 TTTACCATTTGTTTGGCTGGATT 57.441 34.783 0.00 0.00 40.68 3.01
253 254 5.559148 TTTTACCATTTGTTTGGCTGGAT 57.441 34.783 0.00 0.00 40.68 3.41
254 255 5.559148 ATTTTACCATTTGTTTGGCTGGA 57.441 34.783 0.00 0.00 40.68 3.86
255 256 6.261826 TCAAATTTTACCATTTGTTTGGCTGG 59.738 34.615 6.15 0.00 42.51 4.85
256 257 7.256756 TCAAATTTTACCATTTGTTTGGCTG 57.743 32.000 6.15 0.00 42.51 4.85
257 258 7.555914 ACTTCAAATTTTACCATTTGTTTGGCT 59.444 29.630 6.15 0.00 42.51 4.75
258 259 7.643371 CACTTCAAATTTTACCATTTGTTTGGC 59.357 33.333 6.15 0.00 42.51 4.52
259 260 8.887717 TCACTTCAAATTTTACCATTTGTTTGG 58.112 29.630 6.15 0.00 42.51 3.28
264 265 9.715123 GGTTTTCACTTCAAATTTTACCATTTG 57.285 29.630 0.00 0.53 43.04 2.32
265 266 8.898761 GGGTTTTCACTTCAAATTTTACCATTT 58.101 29.630 0.00 0.00 0.00 2.32
266 267 7.500892 GGGGTTTTCACTTCAAATTTTACCATT 59.499 33.333 0.00 0.00 0.00 3.16
267 268 6.995686 GGGGTTTTCACTTCAAATTTTACCAT 59.004 34.615 0.00 0.00 0.00 3.55
268 269 6.070194 TGGGGTTTTCACTTCAAATTTTACCA 60.070 34.615 0.00 0.00 0.00 3.25
269 270 6.350103 TGGGGTTTTCACTTCAAATTTTACC 58.650 36.000 0.00 0.00 0.00 2.85
270 271 7.045416 ACTGGGGTTTTCACTTCAAATTTTAC 58.955 34.615 0.00 0.00 0.00 2.01
271 272 7.189079 ACTGGGGTTTTCACTTCAAATTTTA 57.811 32.000 0.00 0.00 0.00 1.52
272 273 6.061022 ACTGGGGTTTTCACTTCAAATTTT 57.939 33.333 0.00 0.00 0.00 1.82
273 274 5.692115 ACTGGGGTTTTCACTTCAAATTT 57.308 34.783 0.00 0.00 0.00 1.82
274 275 5.692115 AACTGGGGTTTTCACTTCAAATT 57.308 34.783 0.00 0.00 30.55 1.82
275 276 5.692115 AAACTGGGGTTTTCACTTCAAAT 57.308 34.783 0.00 0.00 42.28 2.32
288 289 9.541884 AGTATAAATTATGAACAAAACTGGGGT 57.458 29.630 0.00 0.00 0.00 4.95
337 338 5.591472 TGGCATCTGAAAAATGAGATAGTGG 59.409 40.000 0.00 0.00 0.00 4.00
358 359 2.905075 AGTTGGCTTTGTTTTCTTGGC 58.095 42.857 0.00 0.00 0.00 4.52
497 498 4.758251 TGCCTCGCACGATGGTGG 62.758 66.667 10.06 0.37 44.54 4.61
1404 1420 2.885894 GGACGGAGGGAGTAGTCATTAG 59.114 54.545 0.00 0.00 35.49 1.73
1416 1432 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
1417 1433 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
1418 1434 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
1419 1435 1.205417 GGACAAGTATTTCCGGACGGA 59.795 52.381 1.83 9.76 43.52 4.69
1420 1436 1.206371 AGGACAAGTATTTCCGGACGG 59.794 52.381 1.83 3.96 36.95 4.79
1421 1437 2.667473 AGGACAAGTATTTCCGGACG 57.333 50.000 1.83 0.00 36.95 4.79
1422 1438 3.934068 TCAAGGACAAGTATTTCCGGAC 58.066 45.455 1.83 0.00 36.95 4.79
1423 1439 4.627284 TTCAAGGACAAGTATTTCCGGA 57.373 40.909 0.00 0.00 36.95 5.14
1424 1440 5.393027 CCATTTCAAGGACAAGTATTTCCGG 60.393 44.000 0.00 0.00 36.95 5.14
1425 1441 5.183140 ACCATTTCAAGGACAAGTATTTCCG 59.817 40.000 0.00 0.00 36.95 4.30
1426 1442 6.590234 ACCATTTCAAGGACAAGTATTTCC 57.410 37.500 0.00 0.00 0.00 3.13
1427 1443 7.433680 ACAACCATTTCAAGGACAAGTATTTC 58.566 34.615 0.00 0.00 0.00 2.17
1428 1444 7.360113 ACAACCATTTCAAGGACAAGTATTT 57.640 32.000 0.00 0.00 0.00 1.40
1429 1445 6.976934 ACAACCATTTCAAGGACAAGTATT 57.023 33.333 0.00 0.00 0.00 1.89
1430 1446 8.109634 AGATACAACCATTTCAAGGACAAGTAT 58.890 33.333 0.00 0.00 0.00 2.12
1431 1447 7.458397 AGATACAACCATTTCAAGGACAAGTA 58.542 34.615 0.00 0.00 0.00 2.24
1432 1448 6.306987 AGATACAACCATTTCAAGGACAAGT 58.693 36.000 0.00 0.00 0.00 3.16
1433 1449 6.824305 AGATACAACCATTTCAAGGACAAG 57.176 37.500 0.00 0.00 0.00 3.16
1434 1450 7.606456 GTCTAGATACAACCATTTCAAGGACAA 59.394 37.037 0.00 0.00 0.00 3.18
1435 1451 7.038302 AGTCTAGATACAACCATTTCAAGGACA 60.038 37.037 0.00 0.00 0.00 4.02
1436 1452 7.331791 AGTCTAGATACAACCATTTCAAGGAC 58.668 38.462 0.00 0.00 0.00 3.85
1437 1453 7.496346 AGTCTAGATACAACCATTTCAAGGA 57.504 36.000 0.00 0.00 0.00 3.36
1438 1454 9.838339 ATAAGTCTAGATACAACCATTTCAAGG 57.162 33.333 0.00 0.00 0.00 3.61
1473 1489 9.919416 TCAAAATGGAGAAAATGGATGTATCTA 57.081 29.630 0.00 0.00 0.00 1.98
1474 1490 8.827832 TCAAAATGGAGAAAATGGATGTATCT 57.172 30.769 0.00 0.00 0.00 1.98
1475 1491 9.525409 CTTCAAAATGGAGAAAATGGATGTATC 57.475 33.333 0.00 0.00 0.00 2.24
1476 1492 9.258629 TCTTCAAAATGGAGAAAATGGATGTAT 57.741 29.630 0.00 0.00 0.00 2.29
1477 1493 8.522830 GTCTTCAAAATGGAGAAAATGGATGTA 58.477 33.333 0.00 0.00 0.00 2.29
1478 1494 7.015487 TGTCTTCAAAATGGAGAAAATGGATGT 59.985 33.333 0.00 0.00 0.00 3.06
1479 1495 7.380536 TGTCTTCAAAATGGAGAAAATGGATG 58.619 34.615 0.00 0.00 0.00 3.51
1480 1496 7.543359 TGTCTTCAAAATGGAGAAAATGGAT 57.457 32.000 0.00 0.00 0.00 3.41
1481 1497 6.975196 TGTCTTCAAAATGGAGAAAATGGA 57.025 33.333 0.00 0.00 0.00 3.41
1482 1498 7.212274 ACTTGTCTTCAAAATGGAGAAAATGG 58.788 34.615 0.00 0.00 32.87 3.16
1483 1499 9.918630 ATACTTGTCTTCAAAATGGAGAAAATG 57.081 29.630 0.00 0.00 32.87 2.32
1486 1502 9.965824 GAAATACTTGTCTTCAAAATGGAGAAA 57.034 29.630 0.00 0.00 32.87 2.52
1487 1503 8.576442 GGAAATACTTGTCTTCAAAATGGAGAA 58.424 33.333 0.00 0.00 32.87 2.87
1488 1504 7.094805 CGGAAATACTTGTCTTCAAAATGGAGA 60.095 37.037 0.00 0.00 32.87 3.71
1489 1505 7.023575 CGGAAATACTTGTCTTCAAAATGGAG 58.976 38.462 0.00 0.00 32.87 3.86
1490 1506 6.072175 CCGGAAATACTTGTCTTCAAAATGGA 60.072 38.462 0.00 0.00 32.87 3.41
1491 1507 6.072175 TCCGGAAATACTTGTCTTCAAAATGG 60.072 38.462 0.00 0.00 32.87 3.16
1492 1508 6.801862 GTCCGGAAATACTTGTCTTCAAAATG 59.198 38.462 5.23 0.00 32.87 2.32
1493 1509 6.348213 CGTCCGGAAATACTTGTCTTCAAAAT 60.348 38.462 5.23 0.00 32.87 1.82
1494 1510 5.049954 CGTCCGGAAATACTTGTCTTCAAAA 60.050 40.000 5.23 0.00 32.87 2.44
1495 1511 4.449743 CGTCCGGAAATACTTGTCTTCAAA 59.550 41.667 5.23 0.00 32.87 2.69
1496 1512 3.991773 CGTCCGGAAATACTTGTCTTCAA 59.008 43.478 5.23 0.00 0.00 2.69
1497 1513 3.581755 CGTCCGGAAATACTTGTCTTCA 58.418 45.455 5.23 0.00 0.00 3.02
1498 1514 2.928116 CCGTCCGGAAATACTTGTCTTC 59.072 50.000 5.23 0.00 37.50 2.87
1499 1515 2.564062 TCCGTCCGGAAATACTTGTCTT 59.436 45.455 5.23 0.00 42.05 3.01
1500 1516 2.165845 CTCCGTCCGGAAATACTTGTCT 59.834 50.000 5.23 0.00 44.66 3.41
1501 1517 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1502 1518 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1503 1519 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1504 1520 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
1505 1521 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
1506 1522 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
1507 1523 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
1508 1524 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
1509 1525 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
1510 1526 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
1511 1527 1.856539 AAGTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
1512 1528 0.969409 AAAGTACTCCCTCCGTCCGG 60.969 60.000 0.00 0.00 0.00 5.14
1513 1529 1.755179 TAAAGTACTCCCTCCGTCCG 58.245 55.000 0.00 0.00 0.00 4.79
1514 1530 4.892345 ACTTATAAAGTACTCCCTCCGTCC 59.108 45.833 0.00 0.00 40.69 4.79
1515 1531 7.757941 ATACTTATAAAGTACTCCCTCCGTC 57.242 40.000 0.00 0.00 45.99 4.79
1516 1532 8.544687 AAATACTTATAAAGTACTCCCTCCGT 57.455 34.615 0.00 0.00 45.99 4.69
1517 1533 9.828039 AAAAATACTTATAAAGTACTCCCTCCG 57.172 33.333 0.00 0.00 45.99 4.63
1549 1565 2.546368 TCGCGCACAGATTTACACTTTT 59.454 40.909 8.75 0.00 0.00 2.27
1828 2279 0.960364 GTCCCGGCAAGAAATCAGCA 60.960 55.000 0.00 0.00 0.00 4.41
1904 2355 9.407380 AGTCATTACATATAGATTTGTGGCAAA 57.593 29.630 0.00 0.00 0.00 3.68
3268 3725 3.808466 TGTGCTTTTGTTTGGCATACA 57.192 38.095 6.68 6.68 38.27 2.29
3301 3758 7.238096 TCCAGTTCTTTTACCTGGGAAATACTA 59.762 37.037 4.61 0.00 44.78 1.82
3346 3806 2.057316 CACTATATCTGCGCTGCTGAC 58.943 52.381 9.73 0.00 39.15 3.51
3352 3812 4.464244 ACATATGGTCACTATATCTGCGCT 59.536 41.667 9.73 0.00 0.00 5.92
3488 3953 1.453015 AACACGGTTTGCTGCAGGA 60.453 52.632 17.12 10.66 0.00 3.86
3559 4028 9.335891 GCTCTTTATTTCTTCTTTTCAGCTTAC 57.664 33.333 0.00 0.00 0.00 2.34
3596 4065 1.160137 CTTTGCGTTTCTCCCCTCTG 58.840 55.000 0.00 0.00 0.00 3.35
3653 4122 8.966069 AAGAACTATTATAAGCAGTTCCTTCC 57.034 34.615 25.07 11.51 46.03 3.46
3855 4325 7.446625 AGGATATGGCAATCTCAACAGAATAAC 59.553 37.037 0.00 0.00 30.24 1.89
3905 4404 3.606346 GTGCGCATGTTAAACATAACACC 59.394 43.478 15.91 0.00 42.01 4.16
3938 4437 8.830201 TGTTAACAAAGCTGAAAATATGCAAT 57.170 26.923 5.64 0.00 0.00 3.56
3960 4459 6.357579 TGGCACCAGATTTCATATTTTGTT 57.642 33.333 0.00 0.00 0.00 2.83
3971 4470 2.042979 ACCCTAACATGGCACCAGATTT 59.957 45.455 0.00 0.00 0.00 2.17
3975 4474 2.799126 TTACCCTAACATGGCACCAG 57.201 50.000 0.00 0.00 0.00 4.00
3982 4481 3.536956 TCCTCGCTTTACCCTAACATG 57.463 47.619 0.00 0.00 0.00 3.21
4011 4510 0.105039 CGTCCATCCTAGAGCCAACC 59.895 60.000 0.00 0.00 0.00 3.77
4104 4603 1.794222 CACTCGGCGTTCCCATTTC 59.206 57.895 6.85 0.00 0.00 2.17
4147 4646 1.769026 TCGGGAGACTTGGATCTCAG 58.231 55.000 5.23 0.00 46.00 3.35
4164 4663 4.898829 TTCCTTATGCCAACAATCATCG 57.101 40.909 0.00 0.00 0.00 3.84
4216 4718 0.108585 TTCCTGTGTGGTTCTGGCTC 59.891 55.000 0.00 0.00 37.07 4.70
4217 4719 0.109342 CTTCCTGTGTGGTTCTGGCT 59.891 55.000 0.00 0.00 37.07 4.75
4218 4720 0.108585 TCTTCCTGTGTGGTTCTGGC 59.891 55.000 0.00 0.00 37.07 4.85
4219 4721 2.498167 CTTCTTCCTGTGTGGTTCTGG 58.502 52.381 0.00 0.00 37.07 3.86
4220 4722 2.104792 TCCTTCTTCCTGTGTGGTTCTG 59.895 50.000 0.00 0.00 37.07 3.02
4221 4723 2.408565 TCCTTCTTCCTGTGTGGTTCT 58.591 47.619 0.00 0.00 37.07 3.01
4253 4755 1.390565 TTTCTCCGACGATCTCCTCC 58.609 55.000 0.00 0.00 0.00 4.30
4321 4823 2.115052 GTGATGGTGGTGGTGGCA 59.885 61.111 0.00 0.00 0.00 4.92
4323 4825 1.340889 CTTTTGTGATGGTGGTGGTGG 59.659 52.381 0.00 0.00 0.00 4.61
4324 4826 1.269726 GCTTTTGTGATGGTGGTGGTG 60.270 52.381 0.00 0.00 0.00 4.17
4325 4827 1.039856 GCTTTTGTGATGGTGGTGGT 58.960 50.000 0.00 0.00 0.00 4.16
4390 5316 7.876068 CAGTAACACAGAACCCTTTCTTATGTA 59.124 37.037 2.85 0.00 40.34 2.29
4391 5317 6.710744 CAGTAACACAGAACCCTTTCTTATGT 59.289 38.462 0.00 0.00 40.34 2.29
4392 5318 6.934645 TCAGTAACACAGAACCCTTTCTTATG 59.065 38.462 0.00 0.00 40.34 1.90
4394 5320 6.488769 TCAGTAACACAGAACCCTTTCTTA 57.511 37.500 0.00 0.00 40.34 2.10
4407 5334 3.743521 AGCAGCATCTTTCAGTAACACA 58.256 40.909 0.00 0.00 0.00 3.72
4408 5335 6.253746 CAATAGCAGCATCTTTCAGTAACAC 58.746 40.000 0.00 0.00 0.00 3.32
4430 5357 4.569279 TTCCCAGCGAACAAGCAA 57.431 50.000 0.00 0.00 40.15 3.91
4497 5454 4.692625 ACTCTGAGCAACACATAACATGTC 59.307 41.667 4.19 0.00 42.70 3.06
4516 5479 7.719633 TGTTATAGGCAAAGAAAGTTCAACTCT 59.280 33.333 0.00 0.00 0.00 3.24
4557 5524 4.415735 CGAAAACGATCACTCTCATCTCA 58.584 43.478 0.00 0.00 0.00 3.27
4558 5525 3.241784 GCGAAAACGATCACTCTCATCTC 59.758 47.826 0.00 0.00 0.00 2.75
4559 5526 3.119316 AGCGAAAACGATCACTCTCATCT 60.119 43.478 0.00 0.00 0.00 2.90
4560 5527 3.182967 AGCGAAAACGATCACTCTCATC 58.817 45.455 0.00 0.00 0.00 2.92
4561 5528 3.238108 AGCGAAAACGATCACTCTCAT 57.762 42.857 0.00 0.00 0.00 2.90
4596 5565 1.642037 CGCTGCAGATGTGGACCTTG 61.642 60.000 20.43 0.00 0.00 3.61
4663 6502 1.183549 GGTTCAAGCCTCGGTCTCTA 58.816 55.000 0.00 0.00 0.00 2.43
4673 6512 1.009829 CTACATGAGCGGTTCAAGCC 58.990 55.000 0.00 0.00 39.77 4.35
4682 6521 1.350193 GTGTCACCACTACATGAGCG 58.650 55.000 0.00 0.00 38.61 5.03
4734 6578 5.658190 CCTTGGTCCAAACTCCAAATATCAT 59.342 40.000 5.64 0.00 42.14 2.45
4919 9057 2.627699 TGGCTGGTGTTGAGAAAATTCC 59.372 45.455 0.00 0.00 0.00 3.01
4927 9065 0.523072 CGGAATTGGCTGGTGTTGAG 59.477 55.000 0.00 0.00 0.00 3.02
4983 9121 0.521291 TCGTAACCGACCAGTTACCG 59.479 55.000 8.54 5.10 46.11 4.02
5004 9142 8.977412 AGGTTCTCAATTCCAGTAAAAAGAAAA 58.023 29.630 0.00 0.00 0.00 2.29
5005 9143 8.533569 AGGTTCTCAATTCCAGTAAAAAGAAA 57.466 30.769 0.00 0.00 0.00 2.52
5006 9144 8.533569 AAGGTTCTCAATTCCAGTAAAAAGAA 57.466 30.769 0.00 0.00 0.00 2.52
5007 9145 9.807921 ATAAGGTTCTCAATTCCAGTAAAAAGA 57.192 29.630 0.00 0.00 0.00 2.52
5076 9248 0.892755 ATGTCGCAGTAGGGTTTCGA 59.107 50.000 0.00 0.00 0.00 3.71
5091 9263 1.226491 GCATTGCCGAGCACATGTC 60.226 57.895 0.00 0.00 38.71 3.06
5115 9292 3.713936 GGCATTGCCTTCCGTAAAC 57.286 52.632 20.66 0.00 46.69 2.01
5218 9395 2.827921 ACACCCATTGCTTGATTTCCTC 59.172 45.455 0.00 0.00 0.00 3.71
5259 9436 3.954258 CACAAGTCTTTTGGTCCCTCTTT 59.046 43.478 0.00 0.00 0.00 2.52
5261 9438 2.777692 TCACAAGTCTTTTGGTCCCTCT 59.222 45.455 0.00 0.00 0.00 3.69
5264 9441 2.032924 CGTTCACAAGTCTTTTGGTCCC 59.967 50.000 0.00 0.00 0.00 4.46
5265 9442 2.681344 ACGTTCACAAGTCTTTTGGTCC 59.319 45.455 0.00 0.00 0.00 4.46
5266 9443 3.621715 AGACGTTCACAAGTCTTTTGGTC 59.378 43.478 0.00 0.02 44.46 4.02
5267 9444 3.606687 AGACGTTCACAAGTCTTTTGGT 58.393 40.909 0.00 0.00 44.46 3.67
5278 9455 4.101942 GCAAATGTTCAAAGACGTTCACA 58.898 39.130 0.00 0.00 0.00 3.58
5279 9456 4.101942 TGCAAATGTTCAAAGACGTTCAC 58.898 39.130 0.00 0.00 0.00 3.18
5299 9476 2.924105 GCCTGTTGGAGCAACCTGC 61.924 63.158 0.00 0.00 42.96 4.85
5319 9499 0.819259 ATGCTGGTTGTGTGCTCGTT 60.819 50.000 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.