Multiple sequence alignment - TraesCS7B01G005800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G005800 chr7B 100.000 5527 0 0 1 5527 3170084 3175610 0.000000e+00 10207
1 TraesCS7B01G005800 chr7A 92.591 3037 158 23 2549 5527 64924488 64927515 0.000000e+00 4300
2 TraesCS7B01G005800 chr7A 85.227 616 54 20 733 1335 64923657 64924248 2.850000e-167 599
3 TraesCS7B01G005800 chr7A 85.749 407 35 12 733 1136 64917097 64917483 5.150000e-110 409
4 TraesCS7B01G005800 chr7D 94.538 2618 94 10 2457 5042 60669581 60672181 0.000000e+00 3997
5 TraesCS7B01G005800 chr7D 90.795 1760 89 30 728 2452 60667765 60669486 0.000000e+00 2285
6 TraesCS7B01G005800 chr3D 86.085 1466 121 39 1869 3290 225866764 225865338 0.000000e+00 1500
7 TraesCS7B01G005800 chr3D 91.952 497 37 3 3709 4205 225852768 225852275 0.000000e+00 693
8 TraesCS7B01G005800 chr3D 89.535 430 32 3 910 1339 225868041 225867625 2.930000e-147 532
9 TraesCS7B01G005800 chr3D 87.500 440 40 7 3288 3712 225855663 225855224 1.380000e-135 494
10 TraesCS7B01G005800 chr3D 92.582 337 25 0 4203 4539 225852072 225851736 8.320000e-133 484
11 TraesCS7B01G005800 chr3D 81.140 456 42 15 1425 1863 225867546 225867118 5.340000e-85 326
12 TraesCS7B01G005800 chr3B 85.802 1458 116 43 1869 3286 299126885 299128291 0.000000e+00 1461
13 TraesCS7B01G005800 chr3B 90.200 500 41 7 3709 4205 299143844 299144338 0.000000e+00 645
14 TraesCS7B01G005800 chr3B 92.878 337 24 0 4203 4539 299144551 299144887 1.790000e-134 490
15 TraesCS7B01G005800 chr3B 87.097 434 41 10 3288 3706 299141058 299141491 1.390000e-130 477
16 TraesCS7B01G005800 chr3B 88.101 395 30 7 910 1301 299120516 299120896 2.350000e-123 453
17 TraesCS7B01G005800 chr3A 86.256 1397 109 36 1936 3289 264047581 264046225 0.000000e+00 1439
18 TraesCS7B01G005800 chr3A 81.622 974 111 29 910 1863 264049091 264048166 0.000000e+00 745
19 TraesCS7B01G005800 chr3A 89.879 494 40 9 3709 4201 264025620 264025136 1.310000e-175 627
20 TraesCS7B01G005800 chr3A 87.443 438 42 6 3288 3712 264028454 264028017 4.970000e-135 492
21 TraesCS7B01G005800 chr3A 92.878 337 24 0 4203 4539 264024930 264024594 1.790000e-134 490
22 TraesCS7B01G005800 chr6B 89.200 500 46 7 3709 4205 51909033 51908539 7.870000e-173 617
23 TraesCS7B01G005800 chr6B 89.318 337 35 1 4203 4539 51908328 51907993 6.620000e-114 422
24 TraesCS7B01G005800 chr2D 81.761 159 27 2 3966 4123 89387859 89388016 1.250000e-26 132
25 TraesCS7B01G005800 chr2B 80.723 166 28 4 3961 4123 141988032 141988196 5.810000e-25 126


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G005800 chr7B 3170084 3175610 5526 False 10207.000000 10207 100.000000 1 5527 1 chr7B.!!$F1 5526
1 TraesCS7B01G005800 chr7A 64923657 64927515 3858 False 2449.500000 4300 88.909000 733 5527 2 chr7A.!!$F2 4794
2 TraesCS7B01G005800 chr7D 60667765 60672181 4416 False 3141.000000 3997 92.666500 728 5042 2 chr7D.!!$F1 4314
3 TraesCS7B01G005800 chr3D 225865338 225868041 2703 True 786.000000 1500 85.586667 910 3290 3 chr3D.!!$R2 2380
4 TraesCS7B01G005800 chr3D 225851736 225855663 3927 True 557.000000 693 90.678000 3288 4539 3 chr3D.!!$R1 1251
5 TraesCS7B01G005800 chr3B 299126885 299128291 1406 False 1461.000000 1461 85.802000 1869 3286 1 chr3B.!!$F2 1417
6 TraesCS7B01G005800 chr3B 299141058 299144887 3829 False 537.333333 645 90.058333 3288 4539 3 chr3B.!!$F3 1251
7 TraesCS7B01G005800 chr3A 264046225 264049091 2866 True 1092.000000 1439 83.939000 910 3289 2 chr3A.!!$R2 2379
8 TraesCS7B01G005800 chr3A 264024594 264028454 3860 True 536.333333 627 90.066667 3288 4539 3 chr3A.!!$R1 1251
9 TraesCS7B01G005800 chr6B 51907993 51909033 1040 True 519.500000 617 89.259000 3709 4539 2 chr6B.!!$R1 830


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
370 371 0.028902 GCTGAAACTTTCACGCCGTT 59.971 50.0 0.00 0.0 35.46 4.44 F
511 512 0.102663 GTAGAAGCCCGGAGTGCTAC 59.897 60.0 0.73 4.0 38.34 3.58 F
597 598 0.107654 ACTGAGGTCAATTAGCGGCC 60.108 55.0 0.00 0.0 0.00 6.13 F
709 710 0.248289 TAACTGTTGTCCTAGGCGGC 59.752 55.0 2.96 0.0 0.00 6.53 F
1143 1199 0.391263 CCGCGCCCCTAATAATCCTC 60.391 60.0 0.00 0.0 0.00 3.71 F
2915 3727 0.462047 GGCCGTGAAGTGGTAGATGG 60.462 60.0 0.00 0.0 0.00 3.51 F
4434 7996 0.953727 AGTGCTGCGCAAGAAATTCA 59.046 45.0 13.05 0.0 41.47 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1218 1287 1.472376 CCCCGATCTGCTCACTCTTTC 60.472 57.143 0.00 0.0 0.00 2.62 R
2270 2936 1.475280 CATGGCTCATGGACAAGGTTG 59.525 52.381 7.15 0.0 38.11 3.77 R
2282 2948 1.948834 CAACAGTGTTGACATGGCTCA 59.051 47.619 28.44 0.0 0.00 4.26 R
2392 3063 3.758755 TCTGCCATAGTGCCATCTAAG 57.241 47.619 0.00 0.0 0.00 2.18 R
3097 3917 1.064060 GTTCATAAGTGTGCGATGCCC 59.936 52.381 0.00 0.0 0.00 5.36 R
4442 8004 0.963225 TGGAATCGTGTTCCTCGTCA 59.037 50.000 18.44 1.3 39.31 4.35 R
5311 8888 0.249398 CCCGGACGAAGAATTCCACT 59.751 55.000 0.73 0.0 43.81 4.00 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.508436 TTCCGCTGTCACTTGGCA 59.492 55.556 0.00 0.00 0.00 4.92
18 19 1.891919 TTCCGCTGTCACTTGGCAC 60.892 57.895 0.00 0.00 0.00 5.01
19 20 2.281070 CCGCTGTCACTTGGCACT 60.281 61.111 0.00 0.00 0.00 4.40
20 21 2.610694 CCGCTGTCACTTGGCACTG 61.611 63.158 0.00 0.00 0.00 3.66
21 22 2.610694 CGCTGTCACTTGGCACTGG 61.611 63.158 0.00 0.00 0.00 4.00
22 23 1.227943 GCTGTCACTTGGCACTGGA 60.228 57.895 0.00 0.00 0.00 3.86
23 24 0.607489 GCTGTCACTTGGCACTGGAT 60.607 55.000 0.00 0.00 0.00 3.41
24 25 1.901591 CTGTCACTTGGCACTGGATT 58.098 50.000 0.00 0.00 0.00 3.01
25 26 1.808945 CTGTCACTTGGCACTGGATTC 59.191 52.381 0.00 0.00 0.00 2.52
26 27 1.142667 TGTCACTTGGCACTGGATTCA 59.857 47.619 0.00 0.00 0.00 2.57
27 28 1.537202 GTCACTTGGCACTGGATTCAC 59.463 52.381 0.00 0.00 0.00 3.18
28 29 1.142667 TCACTTGGCACTGGATTCACA 59.857 47.619 0.00 0.00 0.00 3.58
29 30 2.165167 CACTTGGCACTGGATTCACAT 58.835 47.619 0.00 0.00 0.00 3.21
30 31 2.094906 CACTTGGCACTGGATTCACATG 60.095 50.000 0.00 0.00 0.00 3.21
31 32 2.165167 CTTGGCACTGGATTCACATGT 58.835 47.619 0.00 0.00 0.00 3.21
32 33 2.291209 TGGCACTGGATTCACATGTT 57.709 45.000 0.00 0.00 0.00 2.71
33 34 1.887854 TGGCACTGGATTCACATGTTG 59.112 47.619 0.00 0.00 0.00 3.33
34 35 1.203052 GGCACTGGATTCACATGTTGG 59.797 52.381 0.00 0.00 0.00 3.77
35 36 1.888512 GCACTGGATTCACATGTTGGT 59.111 47.619 0.00 0.00 0.00 3.67
36 37 2.297033 GCACTGGATTCACATGTTGGTT 59.703 45.455 0.00 0.00 0.00 3.67
37 38 3.612479 GCACTGGATTCACATGTTGGTTC 60.612 47.826 0.00 0.00 0.00 3.62
38 39 3.569277 CACTGGATTCACATGTTGGTTCA 59.431 43.478 0.00 0.00 0.00 3.18
39 40 4.037803 CACTGGATTCACATGTTGGTTCAA 59.962 41.667 0.00 0.00 0.00 2.69
40 41 4.834496 ACTGGATTCACATGTTGGTTCAAT 59.166 37.500 0.00 0.00 0.00 2.57
41 42 6.009589 ACTGGATTCACATGTTGGTTCAATA 58.990 36.000 0.00 0.00 0.00 1.90
42 43 6.493115 ACTGGATTCACATGTTGGTTCAATAA 59.507 34.615 0.00 0.00 0.00 1.40
43 44 7.015098 ACTGGATTCACATGTTGGTTCAATAAA 59.985 33.333 0.00 0.00 0.00 1.40
44 45 7.730084 TGGATTCACATGTTGGTTCAATAAAA 58.270 30.769 0.00 0.00 0.00 1.52
45 46 8.206867 TGGATTCACATGTTGGTTCAATAAAAA 58.793 29.630 0.00 0.00 0.00 1.94
46 47 8.495148 GGATTCACATGTTGGTTCAATAAAAAC 58.505 33.333 0.00 0.00 0.00 2.43
47 48 8.954950 ATTCACATGTTGGTTCAATAAAAACA 57.045 26.923 0.00 0.00 35.41 2.83
48 49 8.777865 TTCACATGTTGGTTCAATAAAAACAA 57.222 26.923 0.00 0.00 34.67 2.83
139 140 9.862371 AGATACACCGAAGATGTATCAATAATC 57.138 33.333 21.18 2.12 43.90 1.75
140 141 9.862371 GATACACCGAAGATGTATCAATAATCT 57.138 33.333 16.52 0.00 42.15 2.40
142 143 8.594881 ACACCGAAGATGTATCAATAATCTTC 57.405 34.615 12.49 12.49 46.74 2.87
162 163 7.972832 TCTTCAATAGATGTAAAACAACCGT 57.027 32.000 0.00 0.00 0.00 4.83
163 164 7.802738 TCTTCAATAGATGTAAAACAACCGTG 58.197 34.615 0.00 0.00 0.00 4.94
164 165 7.658167 TCTTCAATAGATGTAAAACAACCGTGA 59.342 33.333 0.00 0.00 0.00 4.35
165 166 7.915293 TCAATAGATGTAAAACAACCGTGAT 57.085 32.000 0.00 0.00 0.00 3.06
166 167 7.747888 TCAATAGATGTAAAACAACCGTGATG 58.252 34.615 0.00 0.00 0.00 3.07
167 168 4.419522 AGATGTAAAACAACCGTGATGC 57.580 40.909 0.00 0.00 0.00 3.91
168 169 3.190535 AGATGTAAAACAACCGTGATGCC 59.809 43.478 0.00 0.00 0.00 4.40
169 170 2.298610 TGTAAAACAACCGTGATGCCA 58.701 42.857 0.00 0.00 0.00 4.92
170 171 2.887783 TGTAAAACAACCGTGATGCCAT 59.112 40.909 0.00 0.00 0.00 4.40
171 172 4.072839 TGTAAAACAACCGTGATGCCATA 58.927 39.130 0.00 0.00 0.00 2.74
172 173 4.519350 TGTAAAACAACCGTGATGCCATAA 59.481 37.500 0.00 0.00 0.00 1.90
173 174 4.592485 AAAACAACCGTGATGCCATAAA 57.408 36.364 0.00 0.00 0.00 1.40
174 175 4.592485 AAACAACCGTGATGCCATAAAA 57.408 36.364 0.00 0.00 0.00 1.52
175 176 4.592485 AACAACCGTGATGCCATAAAAA 57.408 36.364 0.00 0.00 0.00 1.94
176 177 4.799564 ACAACCGTGATGCCATAAAAAT 57.200 36.364 0.00 0.00 0.00 1.82
177 178 4.493547 ACAACCGTGATGCCATAAAAATG 58.506 39.130 0.00 0.00 0.00 2.32
178 179 4.021544 ACAACCGTGATGCCATAAAAATGT 60.022 37.500 0.00 0.00 0.00 2.71
179 180 4.370364 ACCGTGATGCCATAAAAATGTC 57.630 40.909 0.00 0.00 0.00 3.06
180 181 3.181501 ACCGTGATGCCATAAAAATGTCG 60.182 43.478 0.00 0.00 0.00 4.35
181 182 2.783284 CGTGATGCCATAAAAATGTCGC 59.217 45.455 0.00 0.00 0.00 5.19
182 183 3.487376 CGTGATGCCATAAAAATGTCGCT 60.487 43.478 0.00 0.00 0.00 4.93
183 184 4.423732 GTGATGCCATAAAAATGTCGCTT 58.576 39.130 0.00 0.00 0.00 4.68
184 185 4.266029 GTGATGCCATAAAAATGTCGCTTG 59.734 41.667 0.00 0.00 0.00 4.01
185 186 4.157472 TGATGCCATAAAAATGTCGCTTGA 59.843 37.500 0.00 0.00 0.00 3.02
186 187 4.511617 TGCCATAAAAATGTCGCTTGAA 57.488 36.364 0.00 0.00 0.00 2.69
187 188 4.484236 TGCCATAAAAATGTCGCTTGAAG 58.516 39.130 0.00 0.00 0.00 3.02
188 189 3.304293 GCCATAAAAATGTCGCTTGAAGC 59.696 43.478 7.20 7.20 38.02 3.86
189 190 4.484236 CCATAAAAATGTCGCTTGAAGCA 58.516 39.130 18.22 1.52 42.58 3.91
190 191 4.324402 CCATAAAAATGTCGCTTGAAGCAC 59.676 41.667 18.22 14.12 42.58 4.40
191 192 3.715628 AAAAATGTCGCTTGAAGCACT 57.284 38.095 18.22 2.81 42.58 4.40
192 193 3.715628 AAAATGTCGCTTGAAGCACTT 57.284 38.095 18.22 9.57 42.58 3.16
193 194 3.715628 AAATGTCGCTTGAAGCACTTT 57.284 38.095 18.22 14.27 42.58 2.66
194 195 3.715628 AATGTCGCTTGAAGCACTTTT 57.284 38.095 18.22 9.42 42.58 2.27
195 196 4.829064 AATGTCGCTTGAAGCACTTTTA 57.171 36.364 18.22 0.00 42.58 1.52
196 197 3.878086 TGTCGCTTGAAGCACTTTTAG 57.122 42.857 18.22 0.00 42.58 1.85
197 198 3.462982 TGTCGCTTGAAGCACTTTTAGA 58.537 40.909 18.22 1.18 42.58 2.10
198 199 3.247648 TGTCGCTTGAAGCACTTTTAGAC 59.752 43.478 18.22 13.87 42.58 2.59
199 200 2.806244 TCGCTTGAAGCACTTTTAGACC 59.194 45.455 18.22 0.00 42.58 3.85
200 201 2.808543 CGCTTGAAGCACTTTTAGACCT 59.191 45.455 18.22 0.00 42.58 3.85
201 202 3.994392 CGCTTGAAGCACTTTTAGACCTA 59.006 43.478 18.22 0.00 42.58 3.08
202 203 4.092091 CGCTTGAAGCACTTTTAGACCTAG 59.908 45.833 18.22 0.00 42.58 3.02
203 204 5.238583 GCTTGAAGCACTTTTAGACCTAGA 58.761 41.667 13.09 0.00 41.89 2.43
204 205 5.701290 GCTTGAAGCACTTTTAGACCTAGAA 59.299 40.000 13.09 0.00 41.89 2.10
205 206 6.204882 GCTTGAAGCACTTTTAGACCTAGAAA 59.795 38.462 13.09 0.00 41.89 2.52
206 207 7.094592 GCTTGAAGCACTTTTAGACCTAGAAAT 60.095 37.037 13.09 0.00 41.89 2.17
207 208 8.691661 TTGAAGCACTTTTAGACCTAGAAATT 57.308 30.769 0.00 0.00 0.00 1.82
208 209 8.324163 TGAAGCACTTTTAGACCTAGAAATTC 57.676 34.615 0.00 0.00 0.00 2.17
209 210 7.936847 TGAAGCACTTTTAGACCTAGAAATTCA 59.063 33.333 0.00 0.00 0.00 2.57
210 211 7.913674 AGCACTTTTAGACCTAGAAATTCAG 57.086 36.000 0.00 0.00 0.00 3.02
211 212 7.680730 AGCACTTTTAGACCTAGAAATTCAGA 58.319 34.615 0.00 0.00 0.00 3.27
212 213 7.604545 AGCACTTTTAGACCTAGAAATTCAGAC 59.395 37.037 0.00 0.00 0.00 3.51
213 214 7.148390 GCACTTTTAGACCTAGAAATTCAGACC 60.148 40.741 0.00 0.00 0.00 3.85
214 215 7.334671 CACTTTTAGACCTAGAAATTCAGACCC 59.665 40.741 0.00 0.00 0.00 4.46
215 216 6.945636 TTTAGACCTAGAAATTCAGACCCA 57.054 37.500 0.00 0.00 0.00 4.51
216 217 6.945636 TTAGACCTAGAAATTCAGACCCAA 57.054 37.500 0.00 0.00 0.00 4.12
217 218 5.167303 AGACCTAGAAATTCAGACCCAAC 57.833 43.478 0.00 0.00 0.00 3.77
218 219 4.597507 AGACCTAGAAATTCAGACCCAACA 59.402 41.667 0.00 0.00 0.00 3.33
219 220 5.073144 AGACCTAGAAATTCAGACCCAACAA 59.927 40.000 0.00 0.00 0.00 2.83
220 221 5.701224 ACCTAGAAATTCAGACCCAACAAA 58.299 37.500 0.00 0.00 0.00 2.83
221 222 6.314917 ACCTAGAAATTCAGACCCAACAAAT 58.685 36.000 0.00 0.00 0.00 2.32
222 223 6.209391 ACCTAGAAATTCAGACCCAACAAATG 59.791 38.462 0.00 0.00 0.00 2.32
223 224 6.434028 CCTAGAAATTCAGACCCAACAAATGA 59.566 38.462 0.00 0.00 0.00 2.57
224 225 6.923199 AGAAATTCAGACCCAACAAATGAT 57.077 33.333 0.00 0.00 0.00 2.45
225 226 6.694447 AGAAATTCAGACCCAACAAATGATG 58.306 36.000 0.00 0.00 0.00 3.07
226 227 3.940209 TTCAGACCCAACAAATGATGC 57.060 42.857 0.00 0.00 0.00 3.91
227 228 2.874014 TCAGACCCAACAAATGATGCA 58.126 42.857 0.00 0.00 0.00 3.96
228 229 3.433343 TCAGACCCAACAAATGATGCAT 58.567 40.909 0.00 0.00 0.00 3.96
229 230 3.444742 TCAGACCCAACAAATGATGCATC 59.555 43.478 20.14 20.14 0.00 3.91
230 231 3.446161 CAGACCCAACAAATGATGCATCT 59.554 43.478 26.32 10.21 0.00 2.90
231 232 3.698040 AGACCCAACAAATGATGCATCTC 59.302 43.478 26.32 11.92 0.00 2.75
232 233 3.698040 GACCCAACAAATGATGCATCTCT 59.302 43.478 26.32 11.89 0.00 3.10
233 234 4.858850 ACCCAACAAATGATGCATCTCTA 58.141 39.130 26.32 7.97 0.00 2.43
234 235 5.452255 ACCCAACAAATGATGCATCTCTAT 58.548 37.500 26.32 10.04 0.00 1.98
235 236 5.895534 ACCCAACAAATGATGCATCTCTATT 59.104 36.000 26.32 15.30 0.00 1.73
236 237 6.381994 ACCCAACAAATGATGCATCTCTATTT 59.618 34.615 26.32 19.73 0.00 1.40
237 238 6.700081 CCCAACAAATGATGCATCTCTATTTG 59.300 38.462 30.47 30.47 41.84 2.32
238 239 6.700081 CCAACAAATGATGCATCTCTATTTGG 59.300 38.462 32.71 28.31 40.94 3.28
239 240 7.262772 CAACAAATGATGCATCTCTATTTGGT 58.737 34.615 32.71 29.15 40.94 3.67
240 241 6.802608 ACAAATGATGCATCTCTATTTGGTG 58.197 36.000 32.71 20.92 40.94 4.17
241 242 6.604396 ACAAATGATGCATCTCTATTTGGTGA 59.396 34.615 32.71 13.75 40.94 4.02
242 243 7.287005 ACAAATGATGCATCTCTATTTGGTGAT 59.713 33.333 32.71 20.46 40.94 3.06
243 244 6.819397 ATGATGCATCTCTATTTGGTGATG 57.181 37.500 26.32 0.00 39.24 3.07
244 245 5.932455 TGATGCATCTCTATTTGGTGATGA 58.068 37.500 26.32 0.00 38.72 2.92
245 246 6.358991 TGATGCATCTCTATTTGGTGATGAA 58.641 36.000 26.32 0.00 38.72 2.57
246 247 6.829811 TGATGCATCTCTATTTGGTGATGAAA 59.170 34.615 26.32 0.00 38.72 2.69
247 248 7.504574 TGATGCATCTCTATTTGGTGATGAAAT 59.495 33.333 26.32 3.52 38.72 2.17
248 249 7.268199 TGCATCTCTATTTGGTGATGAAATC 57.732 36.000 9.33 0.00 45.83 2.17
249 250 7.058525 TGCATCTCTATTTGGTGATGAAATCT 58.941 34.615 9.33 0.00 45.81 2.40
250 251 7.558807 TGCATCTCTATTTGGTGATGAAATCTT 59.441 33.333 9.33 0.00 45.81 2.40
251 252 8.074972 GCATCTCTATTTGGTGATGAAATCTTC 58.925 37.037 9.33 0.00 45.81 2.87
252 253 9.339850 CATCTCTATTTGGTGATGAAATCTTCT 57.660 33.333 0.00 0.00 45.81 2.85
253 254 9.917887 ATCTCTATTTGGTGATGAAATCTTCTT 57.082 29.630 0.00 0.00 45.81 2.52
254 255 9.745018 TCTCTATTTGGTGATGAAATCTTCTTT 57.255 29.630 0.00 0.00 45.81 2.52
255 256 9.784680 CTCTATTTGGTGATGAAATCTTCTTTG 57.215 33.333 0.00 0.00 45.81 2.77
256 257 9.519191 TCTATTTGGTGATGAAATCTTCTTTGA 57.481 29.630 0.00 0.00 45.81 2.69
259 260 8.647143 TTTGGTGATGAAATCTTCTTTGAAAC 57.353 30.769 0.00 0.00 45.81 2.78
260 261 6.748132 TGGTGATGAAATCTTCTTTGAAACC 58.252 36.000 0.00 0.00 45.81 3.27
261 262 6.159293 GGTGATGAAATCTTCTTTGAAACCC 58.841 40.000 0.00 0.00 45.81 4.11
262 263 6.015095 GGTGATGAAATCTTCTTTGAAACCCT 60.015 38.462 0.00 0.00 45.81 4.34
263 264 7.087007 GTGATGAAATCTTCTTTGAAACCCTC 58.913 38.462 0.00 0.00 45.81 4.30
264 265 6.777091 TGATGAAATCTTCTTTGAAACCCTCA 59.223 34.615 0.00 0.00 45.81 3.86
265 266 7.287466 TGATGAAATCTTCTTTGAAACCCTCAA 59.713 33.333 0.00 0.00 45.81 3.02
266 267 7.601705 TGAAATCTTCTTTGAAACCCTCAAT 57.398 32.000 0.00 0.00 43.64 2.57
267 268 8.021898 TGAAATCTTCTTTGAAACCCTCAATT 57.978 30.769 0.00 0.00 43.64 2.32
268 269 8.485392 TGAAATCTTCTTTGAAACCCTCAATTT 58.515 29.630 0.00 0.00 43.64 1.82
269 270 9.330063 GAAATCTTCTTTGAAACCCTCAATTTT 57.670 29.630 0.00 0.00 43.64 1.82
270 271 9.685276 AAATCTTCTTTGAAACCCTCAATTTTT 57.315 25.926 0.00 0.00 43.64 1.94
272 273 9.987272 ATCTTCTTTGAAACCCTCAATTTTTAG 57.013 29.630 0.00 0.00 43.64 1.85
273 274 7.926018 TCTTCTTTGAAACCCTCAATTTTTAGC 59.074 33.333 0.00 0.00 43.64 3.09
274 275 6.521162 TCTTTGAAACCCTCAATTTTTAGCC 58.479 36.000 0.00 0.00 43.64 3.93
275 276 4.882842 TGAAACCCTCAATTTTTAGCCC 57.117 40.909 0.00 0.00 0.00 5.19
276 277 3.580895 TGAAACCCTCAATTTTTAGCCCC 59.419 43.478 0.00 0.00 0.00 5.80
277 278 3.268034 AACCCTCAATTTTTAGCCCCA 57.732 42.857 0.00 0.00 0.00 4.96
278 279 3.268034 ACCCTCAATTTTTAGCCCCAA 57.732 42.857 0.00 0.00 0.00 4.12
279 280 3.173151 ACCCTCAATTTTTAGCCCCAAG 58.827 45.455 0.00 0.00 0.00 3.61
280 281 3.173151 CCCTCAATTTTTAGCCCCAAGT 58.827 45.455 0.00 0.00 0.00 3.16
281 282 3.055891 CCCTCAATTTTTAGCCCCAAGTG 60.056 47.826 0.00 0.00 0.00 3.16
282 283 3.588955 CTCAATTTTTAGCCCCAAGTGC 58.411 45.455 0.00 0.00 0.00 4.40
283 284 3.238597 TCAATTTTTAGCCCCAAGTGCT 58.761 40.909 0.00 0.00 42.81 4.40
284 285 3.006752 TCAATTTTTAGCCCCAAGTGCTG 59.993 43.478 0.00 0.00 39.91 4.41
285 286 0.678950 TTTTTAGCCCCAAGTGCTGC 59.321 50.000 0.00 0.00 39.91 5.25
286 287 0.468958 TTTTAGCCCCAAGTGCTGCA 60.469 50.000 0.00 0.00 39.91 4.41
287 288 0.468958 TTTAGCCCCAAGTGCTGCAA 60.469 50.000 2.77 0.00 39.91 4.08
288 289 0.468958 TTAGCCCCAAGTGCTGCAAA 60.469 50.000 2.77 0.00 39.91 3.68
289 290 0.251742 TAGCCCCAAGTGCTGCAAAT 60.252 50.000 2.77 0.00 39.91 2.32
290 291 1.123246 AGCCCCAAGTGCTGCAAATT 61.123 50.000 2.77 0.00 37.76 1.82
291 292 0.250424 GCCCCAAGTGCTGCAAATTT 60.250 50.000 2.77 0.00 0.00 1.82
292 293 1.815021 GCCCCAAGTGCTGCAAATTTT 60.815 47.619 2.77 0.00 0.00 1.82
293 294 1.874872 CCCCAAGTGCTGCAAATTTTG 59.125 47.619 2.77 4.72 0.00 2.44
294 295 2.485124 CCCCAAGTGCTGCAAATTTTGA 60.485 45.455 13.26 0.00 0.00 2.69
295 296 3.204526 CCCAAGTGCTGCAAATTTTGAA 58.795 40.909 13.26 1.12 0.00 2.69
296 297 3.002553 CCCAAGTGCTGCAAATTTTGAAC 59.997 43.478 13.26 5.24 0.00 3.18
297 298 3.622163 CCAAGTGCTGCAAATTTTGAACA 59.378 39.130 13.26 4.49 0.00 3.18
298 299 4.260456 CCAAGTGCTGCAAATTTTGAACAG 60.260 41.667 13.26 11.71 0.00 3.16
305 306 4.549458 TGCAAATTTTGAACAGCTCTAGC 58.451 39.130 13.26 0.00 42.49 3.42
312 313 2.266055 ACAGCTCTAGCGGTTGCC 59.734 61.111 1.70 0.00 46.84 4.52
313 314 3.316573 ACAGCTCTAGCGGTTGCCC 62.317 63.158 1.70 0.00 46.84 5.36
315 316 2.046314 GCTCTAGCGGTTGCCCAA 60.046 61.111 0.00 0.00 44.31 4.12
316 317 1.674322 GCTCTAGCGGTTGCCCAAA 60.674 57.895 0.00 0.00 44.31 3.28
317 318 1.241315 GCTCTAGCGGTTGCCCAAAA 61.241 55.000 0.00 0.00 44.31 2.44
318 319 0.521735 CTCTAGCGGTTGCCCAAAAC 59.478 55.000 0.00 0.00 44.31 2.43
319 320 0.891904 TCTAGCGGTTGCCCAAAACC 60.892 55.000 0.00 0.00 45.24 3.27
329 330 3.118905 TGCCCAAAACCAAAATAGTGC 57.881 42.857 0.00 0.00 0.00 4.40
330 331 2.065512 GCCCAAAACCAAAATAGTGCG 58.934 47.619 0.00 0.00 0.00 5.34
331 332 2.682836 CCCAAAACCAAAATAGTGCGG 58.317 47.619 0.00 0.00 0.00 5.69
332 333 2.611722 CCCAAAACCAAAATAGTGCGGG 60.612 50.000 0.00 0.00 0.00 6.13
333 334 2.065512 CAAAACCAAAATAGTGCGGGC 58.934 47.619 0.00 0.00 0.00 6.13
334 335 0.242555 AAACCAAAATAGTGCGGGCG 59.757 50.000 0.00 0.00 0.00 6.13
335 336 1.591504 AACCAAAATAGTGCGGGCGG 61.592 55.000 0.00 0.00 0.00 6.13
336 337 2.770589 CCAAAATAGTGCGGGCGGG 61.771 63.158 0.00 0.00 0.00 6.13
337 338 1.747367 CAAAATAGTGCGGGCGGGA 60.747 57.895 0.00 0.00 0.00 5.14
338 339 1.001887 AAAATAGTGCGGGCGGGAA 60.002 52.632 0.00 0.00 0.00 3.97
339 340 1.310216 AAAATAGTGCGGGCGGGAAC 61.310 55.000 0.00 0.00 0.00 3.62
352 353 2.261361 GGAACCCAAACGCCATGC 59.739 61.111 0.00 0.00 0.00 4.06
353 354 2.275380 GGAACCCAAACGCCATGCT 61.275 57.895 0.00 0.00 0.00 3.79
354 355 1.080569 GAACCCAAACGCCATGCTG 60.081 57.895 0.00 0.00 0.00 4.41
355 356 1.523154 GAACCCAAACGCCATGCTGA 61.523 55.000 0.00 0.00 0.00 4.26
356 357 1.112315 AACCCAAACGCCATGCTGAA 61.112 50.000 0.00 0.00 0.00 3.02
357 358 1.112315 ACCCAAACGCCATGCTGAAA 61.112 50.000 0.00 0.00 0.00 2.69
358 359 0.667184 CCCAAACGCCATGCTGAAAC 60.667 55.000 0.00 0.00 0.00 2.78
359 360 0.314935 CCAAACGCCATGCTGAAACT 59.685 50.000 0.00 0.00 0.00 2.66
360 361 1.269726 CCAAACGCCATGCTGAAACTT 60.270 47.619 0.00 0.00 0.00 2.66
361 362 2.472816 CAAACGCCATGCTGAAACTTT 58.527 42.857 0.00 0.00 0.00 2.66
362 363 2.422276 AACGCCATGCTGAAACTTTC 57.578 45.000 0.00 0.00 0.00 2.62
363 364 1.317613 ACGCCATGCTGAAACTTTCA 58.682 45.000 4.16 4.16 38.17 2.69
364 365 1.001378 ACGCCATGCTGAAACTTTCAC 60.001 47.619 0.00 0.00 35.46 3.18
365 366 1.689959 GCCATGCTGAAACTTTCACG 58.310 50.000 0.00 0.00 35.46 4.35
366 367 1.689959 CCATGCTGAAACTTTCACGC 58.310 50.000 14.26 14.26 35.46 5.34
367 368 1.666888 CCATGCTGAAACTTTCACGCC 60.667 52.381 16.65 5.08 35.46 5.68
368 369 0.238289 ATGCTGAAACTTTCACGCCG 59.762 50.000 16.65 4.63 35.46 6.46
369 370 1.092921 TGCTGAAACTTTCACGCCGT 61.093 50.000 16.65 0.00 35.46 5.68
370 371 0.028902 GCTGAAACTTTCACGCCGTT 59.971 50.000 0.00 0.00 35.46 4.44
371 372 1.920272 GCTGAAACTTTCACGCCGTTC 60.920 52.381 0.00 0.00 35.46 3.95
372 373 1.329292 CTGAAACTTTCACGCCGTTCA 59.671 47.619 0.00 0.00 35.46 3.18
373 374 1.738350 TGAAACTTTCACGCCGTTCAA 59.262 42.857 0.00 0.00 34.08 2.69
374 375 2.356382 TGAAACTTTCACGCCGTTCAAT 59.644 40.909 0.00 0.00 34.08 2.57
375 376 2.681152 AACTTTCACGCCGTTCAATC 57.319 45.000 0.00 0.00 0.00 2.67
376 377 1.588674 ACTTTCACGCCGTTCAATCA 58.411 45.000 0.00 0.00 0.00 2.57
377 378 1.263217 ACTTTCACGCCGTTCAATCAC 59.737 47.619 0.00 0.00 0.00 3.06
378 379 0.589223 TTTCACGCCGTTCAATCACC 59.411 50.000 0.00 0.00 0.00 4.02
379 380 1.561717 TTCACGCCGTTCAATCACCG 61.562 55.000 0.00 0.00 0.00 4.94
380 381 2.029964 ACGCCGTTCAATCACCGT 59.970 55.556 0.00 0.00 0.00 4.83
381 382 1.595929 ACGCCGTTCAATCACCGTT 60.596 52.632 0.00 0.00 0.00 4.44
382 383 1.131826 CGCCGTTCAATCACCGTTC 59.868 57.895 0.00 0.00 0.00 3.95
383 384 1.131826 GCCGTTCAATCACCGTTCG 59.868 57.895 0.00 0.00 0.00 3.95
384 385 1.286354 GCCGTTCAATCACCGTTCGA 61.286 55.000 0.00 0.00 0.00 3.71
385 386 0.437295 CCGTTCAATCACCGTTCGAC 59.563 55.000 0.00 0.00 0.00 4.20
386 387 0.437295 CGTTCAATCACCGTTCGACC 59.563 55.000 0.00 0.00 0.00 4.79
387 388 1.504359 GTTCAATCACCGTTCGACCA 58.496 50.000 0.00 0.00 0.00 4.02
388 389 1.459592 GTTCAATCACCGTTCGACCAG 59.540 52.381 0.00 0.00 0.00 4.00
389 390 0.963225 TCAATCACCGTTCGACCAGA 59.037 50.000 0.00 0.00 0.00 3.86
390 391 1.068474 CAATCACCGTTCGACCAGAC 58.932 55.000 0.00 0.00 0.00 3.51
391 392 0.677288 AATCACCGTTCGACCAGACA 59.323 50.000 0.00 0.00 0.00 3.41
392 393 0.895530 ATCACCGTTCGACCAGACAT 59.104 50.000 0.00 0.00 0.00 3.06
393 394 0.677288 TCACCGTTCGACCAGACATT 59.323 50.000 0.00 0.00 0.00 2.71
394 395 1.068474 CACCGTTCGACCAGACATTC 58.932 55.000 0.00 0.00 0.00 2.67
395 396 0.966920 ACCGTTCGACCAGACATTCT 59.033 50.000 0.00 0.00 0.00 2.40
396 397 1.067776 ACCGTTCGACCAGACATTCTC 60.068 52.381 0.00 0.00 0.00 2.87
397 398 1.260206 CGTTCGACCAGACATTCTCG 58.740 55.000 0.00 0.00 0.00 4.04
398 399 0.992802 GTTCGACCAGACATTCTCGC 59.007 55.000 0.00 0.00 0.00 5.03
399 400 0.108804 TTCGACCAGACATTCTCGCC 60.109 55.000 0.00 0.00 0.00 5.54
400 401 1.215382 CGACCAGACATTCTCGCCA 59.785 57.895 0.00 0.00 0.00 5.69
401 402 1.078759 CGACCAGACATTCTCGCCAC 61.079 60.000 0.00 0.00 0.00 5.01
402 403 0.741221 GACCAGACATTCTCGCCACC 60.741 60.000 0.00 0.00 0.00 4.61
403 404 1.296392 CCAGACATTCTCGCCACCA 59.704 57.895 0.00 0.00 0.00 4.17
404 405 0.321564 CCAGACATTCTCGCCACCAA 60.322 55.000 0.00 0.00 0.00 3.67
405 406 0.798776 CAGACATTCTCGCCACCAAC 59.201 55.000 0.00 0.00 0.00 3.77
406 407 0.687354 AGACATTCTCGCCACCAACT 59.313 50.000 0.00 0.00 0.00 3.16
407 408 0.798776 GACATTCTCGCCACCAACTG 59.201 55.000 0.00 0.00 0.00 3.16
408 409 1.237285 ACATTCTCGCCACCAACTGC 61.237 55.000 0.00 0.00 0.00 4.40
409 410 1.675641 ATTCTCGCCACCAACTGCC 60.676 57.895 0.00 0.00 0.00 4.85
410 411 2.410322 ATTCTCGCCACCAACTGCCA 62.410 55.000 0.00 0.00 0.00 4.92
411 412 2.360350 CTCGCCACCAACTGCCAT 60.360 61.111 0.00 0.00 0.00 4.40
412 413 1.973281 CTCGCCACCAACTGCCATT 60.973 57.895 0.00 0.00 0.00 3.16
413 414 2.203972 CTCGCCACCAACTGCCATTG 62.204 60.000 0.00 0.00 0.00 2.82
414 415 2.047939 GCCACCAACTGCCATTGC 60.048 61.111 0.00 0.00 38.26 3.56
423 424 4.728110 TGCCATTGCAGCCGCTCT 62.728 61.111 0.00 0.00 44.23 4.09
424 425 3.885521 GCCATTGCAGCCGCTCTC 61.886 66.667 0.00 0.00 39.64 3.20
425 426 3.570638 CCATTGCAGCCGCTCTCG 61.571 66.667 0.00 0.00 39.64 4.04
426 427 4.233635 CATTGCAGCCGCTCTCGC 62.234 66.667 0.00 0.00 39.64 5.03
442 443 4.699522 GCGACCGCTCCCAACCTT 62.700 66.667 7.19 0.00 38.26 3.50
443 444 2.742372 CGACCGCTCCCAACCTTG 60.742 66.667 0.00 0.00 0.00 3.61
444 445 3.056328 GACCGCTCCCAACCTTGC 61.056 66.667 0.00 0.00 0.00 4.01
445 446 4.660938 ACCGCTCCCAACCTTGCC 62.661 66.667 0.00 0.00 0.00 4.52
449 450 2.747855 CTCCCAACCTTGCCGCTC 60.748 66.667 0.00 0.00 0.00 5.03
450 451 4.697756 TCCCAACCTTGCCGCTCG 62.698 66.667 0.00 0.00 0.00 5.03
452 453 2.978010 CCAACCTTGCCGCTCGTT 60.978 61.111 0.00 0.00 0.00 3.85
453 454 2.556287 CAACCTTGCCGCTCGTTC 59.444 61.111 0.00 0.00 0.00 3.95
454 455 2.110213 AACCTTGCCGCTCGTTCA 59.890 55.556 0.00 0.00 0.00 3.18
455 456 1.302511 AACCTTGCCGCTCGTTCAT 60.303 52.632 0.00 0.00 0.00 2.57
456 457 1.577328 AACCTTGCCGCTCGTTCATG 61.577 55.000 0.00 0.00 0.00 3.07
457 458 2.034879 CCTTGCCGCTCGTTCATGT 61.035 57.895 0.00 0.00 0.00 3.21
458 459 1.421485 CTTGCCGCTCGTTCATGTC 59.579 57.895 0.00 0.00 0.00 3.06
459 460 2.283780 CTTGCCGCTCGTTCATGTCG 62.284 60.000 0.00 0.00 0.00 4.35
460 461 3.554692 GCCGCTCGTTCATGTCGG 61.555 66.667 11.51 0.00 42.68 4.79
461 462 3.554692 CCGCTCGTTCATGTCGGC 61.555 66.667 11.51 11.90 33.36 5.54
462 463 3.554692 CGCTCGTTCATGTCGGCC 61.555 66.667 11.51 0.00 0.00 6.13
463 464 2.434185 GCTCGTTCATGTCGGCCA 60.434 61.111 2.24 0.00 0.00 5.36
464 465 2.032634 GCTCGTTCATGTCGGCCAA 61.033 57.895 2.24 0.00 0.00 4.52
465 466 1.970917 GCTCGTTCATGTCGGCCAAG 61.971 60.000 2.24 0.00 0.00 3.61
466 467 0.389817 CTCGTTCATGTCGGCCAAGA 60.390 55.000 2.24 0.00 0.00 3.02
467 468 0.249120 TCGTTCATGTCGGCCAAGAT 59.751 50.000 2.24 0.00 0.00 2.40
468 469 1.478916 TCGTTCATGTCGGCCAAGATA 59.521 47.619 2.24 0.00 0.00 1.98
469 470 2.093921 TCGTTCATGTCGGCCAAGATAA 60.094 45.455 2.24 0.00 0.00 1.75
470 471 2.872245 CGTTCATGTCGGCCAAGATAAT 59.128 45.455 2.24 0.00 0.00 1.28
471 472 3.059597 CGTTCATGTCGGCCAAGATAATC 60.060 47.826 2.24 0.00 0.00 1.75
472 473 2.754472 TCATGTCGGCCAAGATAATCG 58.246 47.619 2.24 0.00 0.00 3.34
473 474 1.195448 CATGTCGGCCAAGATAATCGC 59.805 52.381 2.24 0.00 0.00 4.58
474 475 0.531974 TGTCGGCCAAGATAATCGCC 60.532 55.000 2.24 0.00 38.07 5.54
475 476 0.531974 GTCGGCCAAGATAATCGCCA 60.532 55.000 2.24 0.00 41.71 5.69
476 477 0.249868 TCGGCCAAGATAATCGCCAG 60.250 55.000 2.24 0.00 41.71 4.85
477 478 1.230635 CGGCCAAGATAATCGCCAGG 61.231 60.000 2.24 0.00 41.71 4.45
478 479 0.108585 GGCCAAGATAATCGCCAGGA 59.891 55.000 0.00 0.00 41.25 3.86
479 480 1.230324 GCCAAGATAATCGCCAGGAC 58.770 55.000 0.00 0.00 0.00 3.85
480 481 1.884235 CCAAGATAATCGCCAGGACC 58.116 55.000 0.00 0.00 0.00 4.46
481 482 1.543429 CCAAGATAATCGCCAGGACCC 60.543 57.143 0.00 0.00 0.00 4.46
482 483 0.765510 AAGATAATCGCCAGGACCCC 59.234 55.000 0.00 0.00 0.00 4.95
483 484 1.004918 GATAATCGCCAGGACCCCG 60.005 63.158 0.00 0.00 0.00 5.73
484 485 1.755393 GATAATCGCCAGGACCCCGT 61.755 60.000 0.00 0.00 0.00 5.28
485 486 1.755393 ATAATCGCCAGGACCCCGTC 61.755 60.000 0.00 0.00 0.00 4.79
497 498 4.124351 CCCGTCGCTGCCGTAGAA 62.124 66.667 0.00 0.00 35.54 2.10
498 499 2.579787 CCGTCGCTGCCGTAGAAG 60.580 66.667 0.00 0.00 35.54 2.85
499 500 3.248171 CGTCGCTGCCGTAGAAGC 61.248 66.667 0.00 0.00 34.42 3.86
500 501 2.886124 GTCGCTGCCGTAGAAGCC 60.886 66.667 0.00 0.00 34.28 4.35
501 502 4.143333 TCGCTGCCGTAGAAGCCC 62.143 66.667 0.00 0.00 34.28 5.19
508 509 2.202756 CGTAGAAGCCCGGAGTGC 60.203 66.667 0.73 0.00 0.00 4.40
509 510 2.711922 CGTAGAAGCCCGGAGTGCT 61.712 63.158 0.73 0.00 41.89 4.40
510 511 1.381928 CGTAGAAGCCCGGAGTGCTA 61.382 60.000 0.73 0.00 38.34 3.49
511 512 0.102663 GTAGAAGCCCGGAGTGCTAC 59.897 60.000 0.73 4.00 38.34 3.58
512 513 1.041447 TAGAAGCCCGGAGTGCTACC 61.041 60.000 0.73 0.00 38.34 3.18
518 519 3.108343 CGGAGTGCTACCGTCGAT 58.892 61.111 0.00 0.00 44.57 3.59
519 520 1.432251 CGGAGTGCTACCGTCGATT 59.568 57.895 0.00 0.00 44.57 3.34
520 521 0.179145 CGGAGTGCTACCGTCGATTT 60.179 55.000 0.00 0.00 44.57 2.17
521 522 1.557651 GGAGTGCTACCGTCGATTTC 58.442 55.000 0.00 0.00 0.00 2.17
522 523 1.189403 GAGTGCTACCGTCGATTTCG 58.811 55.000 0.00 0.00 41.45 3.46
523 524 0.524862 AGTGCTACCGTCGATTTCGT 59.475 50.000 0.00 0.00 40.80 3.85
524 525 0.912528 GTGCTACCGTCGATTTCGTC 59.087 55.000 0.00 0.00 40.80 4.20
525 526 0.179156 TGCTACCGTCGATTTCGTCC 60.179 55.000 0.00 0.00 40.80 4.79
526 527 0.179156 GCTACCGTCGATTTCGTCCA 60.179 55.000 0.00 0.00 40.80 4.02
527 528 1.535437 GCTACCGTCGATTTCGTCCAT 60.535 52.381 0.00 0.00 40.80 3.41
528 529 2.805845 CTACCGTCGATTTCGTCCATT 58.194 47.619 0.00 0.00 40.80 3.16
529 530 1.636988 ACCGTCGATTTCGTCCATTC 58.363 50.000 0.00 0.00 40.80 2.67
530 531 0.928229 CCGTCGATTTCGTCCATTCC 59.072 55.000 0.00 0.00 40.80 3.01
531 532 0.928229 CGTCGATTTCGTCCATTCCC 59.072 55.000 0.00 0.00 40.80 3.97
532 533 0.928229 GTCGATTTCGTCCATTCCCG 59.072 55.000 0.00 0.00 40.80 5.14
533 534 0.808453 TCGATTTCGTCCATTCCCGC 60.808 55.000 0.00 0.00 40.80 6.13
534 535 1.772063 CGATTTCGTCCATTCCCGCC 61.772 60.000 0.00 0.00 34.11 6.13
535 536 0.746563 GATTTCGTCCATTCCCGCCA 60.747 55.000 0.00 0.00 0.00 5.69
536 537 1.029947 ATTTCGTCCATTCCCGCCAC 61.030 55.000 0.00 0.00 0.00 5.01
537 538 3.615509 TTCGTCCATTCCCGCCACC 62.616 63.158 0.00 0.00 0.00 4.61
538 539 4.096003 CGTCCATTCCCGCCACCT 62.096 66.667 0.00 0.00 0.00 4.00
539 540 2.124695 GTCCATTCCCGCCACCTC 60.125 66.667 0.00 0.00 0.00 3.85
540 541 3.407967 TCCATTCCCGCCACCTCC 61.408 66.667 0.00 0.00 0.00 4.30
541 542 3.727258 CCATTCCCGCCACCTCCA 61.727 66.667 0.00 0.00 0.00 3.86
542 543 2.438434 CATTCCCGCCACCTCCAC 60.438 66.667 0.00 0.00 0.00 4.02
543 544 3.728373 ATTCCCGCCACCTCCACC 61.728 66.667 0.00 0.00 0.00 4.61
547 548 3.953775 CCGCCACCTCCACCACTT 61.954 66.667 0.00 0.00 0.00 3.16
548 549 2.669569 CGCCACCTCCACCACTTG 60.670 66.667 0.00 0.00 0.00 3.16
560 561 3.313012 CACCACTTGGAATAGTCGTCA 57.687 47.619 1.14 0.00 38.94 4.35
561 562 2.993899 CACCACTTGGAATAGTCGTCAC 59.006 50.000 1.14 0.00 38.94 3.67
562 563 2.897969 ACCACTTGGAATAGTCGTCACT 59.102 45.455 1.14 0.00 38.94 3.41
563 564 3.254060 CCACTTGGAATAGTCGTCACTG 58.746 50.000 0.00 0.00 37.39 3.66
564 565 3.254060 CACTTGGAATAGTCGTCACTGG 58.746 50.000 0.00 0.00 33.62 4.00
565 566 3.056821 CACTTGGAATAGTCGTCACTGGA 60.057 47.826 0.00 0.00 33.62 3.86
566 567 3.769844 ACTTGGAATAGTCGTCACTGGAT 59.230 43.478 0.00 0.00 33.62 3.41
567 568 4.142138 ACTTGGAATAGTCGTCACTGGATC 60.142 45.833 0.00 0.00 33.62 3.36
568 569 3.361786 TGGAATAGTCGTCACTGGATCA 58.638 45.455 0.00 0.00 33.62 2.92
569 570 3.130516 TGGAATAGTCGTCACTGGATCAC 59.869 47.826 0.00 0.00 33.62 3.06
570 571 3.491104 GGAATAGTCGTCACTGGATCACC 60.491 52.174 0.00 0.00 33.62 4.02
571 572 2.209690 TAGTCGTCACTGGATCACCA 57.790 50.000 0.00 0.00 44.76 4.17
572 573 1.561643 AGTCGTCACTGGATCACCAT 58.438 50.000 0.00 0.00 45.87 3.55
573 574 1.478510 AGTCGTCACTGGATCACCATC 59.521 52.381 0.00 0.00 45.87 3.51
574 575 0.455815 TCGTCACTGGATCACCATCG 59.544 55.000 0.00 0.00 45.87 3.84
575 576 0.455815 CGTCACTGGATCACCATCGA 59.544 55.000 0.00 0.00 45.87 3.59
576 577 1.135112 CGTCACTGGATCACCATCGAA 60.135 52.381 0.00 0.00 45.87 3.71
577 578 2.271800 GTCACTGGATCACCATCGAAC 58.728 52.381 0.00 0.00 45.87 3.95
578 579 1.899142 TCACTGGATCACCATCGAACA 59.101 47.619 0.00 0.00 45.87 3.18
579 580 2.002586 CACTGGATCACCATCGAACAC 58.997 52.381 0.00 0.00 45.87 3.32
580 581 1.902508 ACTGGATCACCATCGAACACT 59.097 47.619 0.00 0.00 45.87 3.55
581 582 2.274437 CTGGATCACCATCGAACACTG 58.726 52.381 0.00 0.00 45.87 3.66
582 583 1.899142 TGGATCACCATCGAACACTGA 59.101 47.619 0.00 0.00 41.77 3.41
583 584 2.094026 TGGATCACCATCGAACACTGAG 60.094 50.000 0.00 0.00 41.77 3.35
584 585 2.544685 GATCACCATCGAACACTGAGG 58.455 52.381 0.00 0.00 0.00 3.86
585 586 1.338107 TCACCATCGAACACTGAGGT 58.662 50.000 0.00 0.00 0.00 3.85
586 587 1.272490 TCACCATCGAACACTGAGGTC 59.728 52.381 0.00 0.00 0.00 3.85
587 588 1.000843 CACCATCGAACACTGAGGTCA 59.999 52.381 0.00 0.00 31.63 4.02
588 589 1.691976 ACCATCGAACACTGAGGTCAA 59.308 47.619 0.00 0.00 31.63 3.18
589 590 2.303022 ACCATCGAACACTGAGGTCAAT 59.697 45.455 0.00 0.00 31.63 2.57
590 591 3.244561 ACCATCGAACACTGAGGTCAATT 60.245 43.478 0.00 0.00 31.63 2.32
591 592 4.020573 ACCATCGAACACTGAGGTCAATTA 60.021 41.667 0.00 0.00 31.63 1.40
592 593 4.568359 CCATCGAACACTGAGGTCAATTAG 59.432 45.833 0.00 0.00 31.63 1.73
593 594 3.585862 TCGAACACTGAGGTCAATTAGC 58.414 45.455 0.00 0.00 31.63 3.09
594 595 2.345641 CGAACACTGAGGTCAATTAGCG 59.654 50.000 0.00 0.00 31.63 4.26
595 596 2.386661 ACACTGAGGTCAATTAGCGG 57.613 50.000 0.00 0.00 0.00 5.52
596 597 1.009829 CACTGAGGTCAATTAGCGGC 58.990 55.000 0.00 0.00 0.00 6.53
597 598 0.107654 ACTGAGGTCAATTAGCGGCC 60.108 55.000 0.00 0.00 0.00 6.13
598 599 1.153449 TGAGGTCAATTAGCGGCCG 60.153 57.895 24.05 24.05 0.00 6.13
599 600 1.887707 GAGGTCAATTAGCGGCCGG 60.888 63.158 29.38 9.14 0.00 6.13
600 601 3.583086 GGTCAATTAGCGGCCGGC 61.583 66.667 29.38 21.18 44.05 6.13
627 628 4.457496 CGAGCCGCCACCACTCAT 62.457 66.667 0.00 0.00 0.00 2.90
628 629 2.045926 GAGCCGCCACCACTCATT 60.046 61.111 0.00 0.00 0.00 2.57
629 630 2.045926 AGCCGCCACCACTCATTC 60.046 61.111 0.00 0.00 0.00 2.67
630 631 3.499737 GCCGCCACCACTCATTCG 61.500 66.667 0.00 0.00 0.00 3.34
631 632 2.264480 CCGCCACCACTCATTCGA 59.736 61.111 0.00 0.00 0.00 3.71
632 633 2.100631 CCGCCACCACTCATTCGAC 61.101 63.158 0.00 0.00 0.00 4.20
633 634 2.444624 CGCCACCACTCATTCGACG 61.445 63.158 0.00 0.00 0.00 5.12
634 635 2.740714 GCCACCACTCATTCGACGC 61.741 63.158 0.00 0.00 0.00 5.19
635 636 1.374125 CCACCACTCATTCGACGCA 60.374 57.895 0.00 0.00 0.00 5.24
636 637 1.626654 CCACCACTCATTCGACGCAC 61.627 60.000 0.00 0.00 0.00 5.34
637 638 1.733041 ACCACTCATTCGACGCACG 60.733 57.895 0.00 0.00 44.09 5.34
638 639 2.444624 CCACTCATTCGACGCACGG 61.445 63.158 3.02 0.00 42.82 4.94
639 640 2.126071 ACTCATTCGACGCACGGG 60.126 61.111 3.02 0.00 42.82 5.28
640 641 2.885644 CTCATTCGACGCACGGGG 60.886 66.667 3.02 0.00 42.82 5.73
641 642 3.642778 CTCATTCGACGCACGGGGT 62.643 63.158 3.02 0.00 42.82 4.95
642 643 3.487202 CATTCGACGCACGGGGTG 61.487 66.667 3.02 0.00 42.82 4.61
643 644 4.752879 ATTCGACGCACGGGGTGG 62.753 66.667 0.00 0.00 42.82 4.61
661 662 2.590575 CGTGCCACGGTGGAAGTT 60.591 61.111 30.65 0.00 40.96 2.66
662 663 2.892334 CGTGCCACGGTGGAAGTTG 61.892 63.158 30.65 9.37 40.96 3.16
663 664 2.203280 TGCCACGGTGGAAGTTGG 60.203 61.111 30.65 2.52 40.96 3.77
664 665 2.112297 GCCACGGTGGAAGTTGGA 59.888 61.111 30.65 0.00 40.96 3.53
665 666 1.303317 GCCACGGTGGAAGTTGGAT 60.303 57.895 30.65 0.00 40.96 3.41
666 667 1.586154 GCCACGGTGGAAGTTGGATG 61.586 60.000 30.65 0.26 40.96 3.51
667 668 1.586154 CCACGGTGGAAGTTGGATGC 61.586 60.000 22.77 0.00 40.96 3.91
668 669 0.888736 CACGGTGGAAGTTGGATGCA 60.889 55.000 0.00 0.00 0.00 3.96
669 670 0.889186 ACGGTGGAAGTTGGATGCAC 60.889 55.000 0.00 0.00 38.28 4.57
671 672 2.267045 GTGGAAGTTGGATGCACCC 58.733 57.895 0.00 0.00 38.00 4.61
672 673 1.076549 TGGAAGTTGGATGCACCCC 59.923 57.895 0.00 0.00 38.00 4.95
673 674 1.682344 GGAAGTTGGATGCACCCCC 60.682 63.158 0.00 0.00 38.00 5.40
674 675 2.035626 AAGTTGGATGCACCCCCG 59.964 61.111 0.00 0.00 38.00 5.73
675 676 4.740822 AGTTGGATGCACCCCCGC 62.741 66.667 0.00 0.00 38.00 6.13
691 692 2.442272 GCCTCCTGGTCCGCTCTA 60.442 66.667 0.00 0.00 35.27 2.43
692 693 2.058595 GCCTCCTGGTCCGCTCTAA 61.059 63.158 0.00 0.00 35.27 2.10
693 694 1.817209 CCTCCTGGTCCGCTCTAAC 59.183 63.158 0.00 0.00 0.00 2.34
694 695 0.684805 CCTCCTGGTCCGCTCTAACT 60.685 60.000 0.00 0.00 0.00 2.24
695 696 0.457851 CTCCTGGTCCGCTCTAACTG 59.542 60.000 0.00 0.00 0.00 3.16
696 697 0.251653 TCCTGGTCCGCTCTAACTGT 60.252 55.000 0.00 0.00 0.00 3.55
697 698 0.608640 CCTGGTCCGCTCTAACTGTT 59.391 55.000 0.00 0.00 0.00 3.16
698 699 1.673033 CCTGGTCCGCTCTAACTGTTG 60.673 57.143 2.69 0.00 0.00 3.33
699 700 1.000955 CTGGTCCGCTCTAACTGTTGT 59.999 52.381 2.69 0.00 0.00 3.32
700 701 1.000506 TGGTCCGCTCTAACTGTTGTC 59.999 52.381 2.69 0.00 0.00 3.18
701 702 1.672145 GGTCCGCTCTAACTGTTGTCC 60.672 57.143 2.69 0.00 0.00 4.02
702 703 1.272769 GTCCGCTCTAACTGTTGTCCT 59.727 52.381 2.69 0.00 0.00 3.85
703 704 2.490903 GTCCGCTCTAACTGTTGTCCTA 59.509 50.000 2.69 0.00 0.00 2.94
704 705 2.753452 TCCGCTCTAACTGTTGTCCTAG 59.247 50.000 2.69 0.00 0.00 3.02
705 706 2.159226 CCGCTCTAACTGTTGTCCTAGG 60.159 54.545 0.82 0.82 0.00 3.02
706 707 2.735762 CGCTCTAACTGTTGTCCTAGGC 60.736 54.545 2.96 0.00 0.00 3.93
707 708 2.735762 GCTCTAACTGTTGTCCTAGGCG 60.736 54.545 2.96 0.00 0.00 5.52
708 709 1.822990 TCTAACTGTTGTCCTAGGCGG 59.177 52.381 2.96 0.00 0.00 6.13
709 710 0.248289 TAACTGTTGTCCTAGGCGGC 59.752 55.000 2.96 0.00 0.00 6.53
710 711 2.125106 CTGTTGTCCTAGGCGGCC 60.125 66.667 12.11 12.11 0.00 6.13
711 712 3.682292 CTGTTGTCCTAGGCGGCCC 62.682 68.421 17.02 0.00 0.00 5.80
712 713 3.712907 GTTGTCCTAGGCGGCCCA 61.713 66.667 17.02 0.00 0.00 5.36
713 714 2.931105 TTGTCCTAGGCGGCCCAA 60.931 61.111 17.02 9.52 0.00 4.12
714 715 3.262448 TTGTCCTAGGCGGCCCAAC 62.262 63.158 17.02 9.42 0.00 3.77
715 716 4.832608 GTCCTAGGCGGCCCAACG 62.833 72.222 17.02 0.63 0.00 4.10
717 718 4.832608 CCTAGGCGGCCCAACGAC 62.833 72.222 17.02 0.00 43.75 4.34
723 724 3.751246 CGGCCCAACGACGGTCTA 61.751 66.667 6.57 0.00 35.47 2.59
724 725 2.183555 GGCCCAACGACGGTCTAG 59.816 66.667 6.57 0.00 0.00 2.43
725 726 2.183555 GCCCAACGACGGTCTAGG 59.816 66.667 6.57 5.14 0.00 3.02
726 727 2.890371 CCCAACGACGGTCTAGGG 59.110 66.667 12.83 12.83 0.00 3.53
731 732 3.528370 CGACGGTCTAGGGCCAGG 61.528 72.222 6.18 0.00 0.00 4.45
768 770 6.758416 GGATCTAATGTTTCAATTGCTTTCCC 59.242 38.462 0.00 0.00 0.00 3.97
772 774 6.806388 AATGTTTCAATTGCTTTCCCATTC 57.194 33.333 0.00 0.00 0.00 2.67
789 791 3.256383 CCATTCTTTGACACCTGAATGCA 59.744 43.478 14.12 0.00 42.34 3.96
791 793 5.475719 CATTCTTTGACACCTGAATGCAAT 58.524 37.500 0.00 0.00 39.16 3.56
796 798 7.669427 TCTTTGACACCTGAATGCAATAAAAT 58.331 30.769 0.00 0.00 0.00 1.82
799 801 9.770097 TTTGACACCTGAATGCAATAAAATAAA 57.230 25.926 0.00 0.00 0.00 1.40
862 864 2.888414 ACCAAGTTTTACATCCGTTGGG 59.112 45.455 4.09 0.00 39.04 4.12
906 908 1.982226 TCTCTCCTCTAGATCTCCCGG 59.018 57.143 0.00 0.00 32.41 5.73
1126 1182 3.606687 AGTAAGCATAAACACCTTCCCG 58.393 45.455 0.00 0.00 0.00 5.14
1143 1199 0.391263 CCGCGCCCCTAATAATCCTC 60.391 60.000 0.00 0.00 0.00 3.71
1150 1206 3.245300 GCCCCTAATAATCCTCCCTTTCC 60.245 52.174 0.00 0.00 0.00 3.13
1240 1309 1.142748 GAGTGAGCAGATCGGGGTG 59.857 63.158 0.00 0.00 0.00 4.61
1275 1344 2.102588 AGGGACGGTTCAGGAAATATCG 59.897 50.000 0.00 0.00 0.00 2.92
1412 1540 7.094762 CCTGTCTTGGAATAGTTAACAGGTTTC 60.095 40.741 8.61 5.07 44.58 2.78
1413 1541 6.425721 TGTCTTGGAATAGTTAACAGGTTTCG 59.574 38.462 8.61 0.00 0.00 3.46
1448 1576 5.123979 GCTAAAATTAAGGAGGTGGACAGTG 59.876 44.000 0.00 0.00 0.00 3.66
1449 1577 4.724279 AAATTAAGGAGGTGGACAGTGT 57.276 40.909 0.00 0.00 0.00 3.55
1450 1578 5.836024 AAATTAAGGAGGTGGACAGTGTA 57.164 39.130 0.00 0.00 0.00 2.90
1484 1612 6.692486 TGTAGATCACTCTTTGGAAGAACTC 58.308 40.000 0.00 0.00 37.02 3.01
1547 1678 9.350357 CTGAAAGTTCTGAATATGTCAAATTGG 57.650 33.333 0.00 0.00 35.22 3.16
1548 1679 7.814107 TGAAAGTTCTGAATATGTCAAATTGGC 59.186 33.333 0.00 0.00 35.22 4.52
1549 1680 5.883661 AGTTCTGAATATGTCAAATTGGCG 58.116 37.500 0.00 0.00 35.22 5.69
1550 1681 5.647658 AGTTCTGAATATGTCAAATTGGCGA 59.352 36.000 0.00 0.00 35.22 5.54
1551 1682 6.150976 AGTTCTGAATATGTCAAATTGGCGAA 59.849 34.615 0.00 0.00 35.22 4.70
1552 1683 6.698008 TCTGAATATGTCAAATTGGCGAAT 57.302 33.333 0.00 0.00 35.22 3.34
1553 1684 7.099266 TCTGAATATGTCAAATTGGCGAATT 57.901 32.000 0.20 0.20 35.22 2.17
1554 1685 6.974048 TCTGAATATGTCAAATTGGCGAATTG 59.026 34.615 7.50 2.92 35.22 2.32
1560 1691 4.157472 TGTCAAATTGGCGAATTGCTATCA 59.843 37.500 7.50 1.62 45.43 2.15
1561 1692 5.101628 GTCAAATTGGCGAATTGCTATCAA 58.898 37.500 7.50 0.00 45.43 2.57
1574 1705 7.637519 CGAATTGCTATCAACAACATCTGTTAG 59.362 37.037 0.00 0.00 46.91 2.34
1582 1713 6.237901 TCAACAACATCTGTTAGCATTAGGT 58.762 36.000 0.00 0.00 46.91 3.08
1583 1714 7.390823 TCAACAACATCTGTTAGCATTAGGTA 58.609 34.615 0.00 0.00 46.91 3.08
1584 1715 7.333423 TCAACAACATCTGTTAGCATTAGGTAC 59.667 37.037 0.00 0.00 46.91 3.34
1612 1743 4.228895 TGCCATGATATTGGGATGCTATCT 59.771 41.667 0.00 0.00 37.24 1.98
1617 1748 7.013369 CCATGATATTGGGATGCTATCTGAATG 59.987 40.741 0.00 0.00 32.80 2.67
1720 1867 4.569719 TTCCTGTCTTAAGATGGGGTTC 57.430 45.455 20.38 4.43 0.00 3.62
1795 1942 5.907197 ATTGCTATTCGTGAGATTTACCG 57.093 39.130 0.00 0.00 41.60 4.02
1910 2405 1.488705 TTGCCTCGACCAGGGATTGT 61.489 55.000 0.00 0.00 43.49 2.71
2103 2762 6.153510 TGCATAACACAATACCTTTGGCAATA 59.846 34.615 0.00 0.00 0.00 1.90
2169 2835 2.036346 GTCTCAAAATGCTGGCCAGTTT 59.964 45.455 32.81 22.92 41.94 2.66
2270 2936 2.099921 TCTTAGGCTGTGCGAATCTCTC 59.900 50.000 0.00 0.00 0.00 3.20
2282 2948 3.866651 CGAATCTCTCAACCTTGTCCAT 58.133 45.455 0.00 0.00 0.00 3.41
2392 3063 2.998670 GTTTAGGTGGTAGAAAGCGGAC 59.001 50.000 0.00 0.00 0.00 4.79
2566 3327 4.044426 GACACTTTTTGGTTCTGCACATC 58.956 43.478 0.00 0.00 0.00 3.06
2617 3378 3.485394 TGTGCATATGTTGTGTTCACCT 58.515 40.909 4.29 0.00 0.00 4.00
2753 3522 5.424121 AGCTAAGTGTTGTCACATTTCAC 57.576 39.130 0.00 1.53 46.01 3.18
2755 3524 5.590259 AGCTAAGTGTTGTCACATTTCACTT 59.410 36.000 19.87 19.87 46.39 3.16
2759 3529 6.942532 AGTGTTGTCACATTTCACTTACAT 57.057 33.333 5.36 0.00 46.01 2.29
2760 3530 7.333528 AGTGTTGTCACATTTCACTTACATT 57.666 32.000 5.36 0.00 46.01 2.71
2761 3531 7.195646 AGTGTTGTCACATTTCACTTACATTG 58.804 34.615 5.36 0.00 46.01 2.82
2846 3649 6.208988 TGTCACACTCTGTAGATGGATAAC 57.791 41.667 0.00 0.00 0.00 1.89
2870 3674 6.879458 ACCTGTGTATCCATCTGTAAGTTTTC 59.121 38.462 0.00 0.00 33.76 2.29
2915 3727 0.462047 GGCCGTGAAGTGGTAGATGG 60.462 60.000 0.00 0.00 0.00 3.51
3239 4059 1.079503 GGCTGCGTCTTAAGAGGTTG 58.920 55.000 22.48 16.80 32.91 3.77
3481 4301 6.508777 TGTTTTAACCACTGCTTTATTCCAC 58.491 36.000 0.00 0.00 0.00 4.02
3587 4416 5.525378 GCTACTTCTCATTGGTATCCACAAG 59.475 44.000 0.00 0.00 30.78 3.16
3606 4435 4.331717 ACAAGTATTTCGTTATTGGAGCCG 59.668 41.667 0.00 0.00 0.00 5.52
3635 4467 2.093816 TGCTCTCTGGACTGTAAGCATG 60.094 50.000 0.00 0.00 37.60 4.06
3707 4551 1.529438 TCGAACACGGTTTGAGCAATC 59.471 47.619 3.42 0.00 0.00 2.67
3766 7107 7.966812 TGACATACATTTAGCAGAGGATATGT 58.033 34.615 0.00 0.00 35.32 2.29
3918 7261 7.693969 AGGACCTTCATTCTCATGTAAAAAG 57.306 36.000 0.00 0.00 0.00 2.27
3934 7278 7.504924 TGTAAAAAGTTCACTGGTATTCTGG 57.495 36.000 0.00 0.00 0.00 3.86
4325 7887 4.511527 TCACAGATGAGGAGATTGCTTTC 58.488 43.478 0.00 0.00 0.00 2.62
4433 7995 2.056094 AAGTGCTGCGCAAGAAATTC 57.944 45.000 13.05 0.00 41.47 2.17
4434 7996 0.953727 AGTGCTGCGCAAGAAATTCA 59.046 45.000 13.05 0.00 41.47 2.57
4442 8004 2.095059 GCGCAAGAAATTCACTCACCAT 60.095 45.455 0.30 0.00 43.02 3.55
4628 8194 1.265905 CGGTGAGTTTGGCAGTTTACC 59.734 52.381 0.00 0.00 0.00 2.85
4632 8198 4.499188 GGTGAGTTTGGCAGTTTACCTTTC 60.499 45.833 0.00 0.00 0.00 2.62
4659 8225 2.368655 AATTTTGGGTCGAGCAATGC 57.631 45.000 17.59 0.00 0.00 3.56
4762 8328 0.963225 TACCAGTAGCGTTCACTGCA 59.037 50.000 7.43 0.00 41.72 4.41
4898 8465 6.711645 GCCGTGGTTTGGATTTATAGGTATTA 59.288 38.462 0.00 0.00 0.00 0.98
4944 8511 8.934023 TTTGTTAGTCCCTCTTGTATTTTGAT 57.066 30.769 0.00 0.00 0.00 2.57
4945 8512 8.934023 TTGTTAGTCCCTCTTGTATTTTGATT 57.066 30.769 0.00 0.00 0.00 2.57
4946 8513 8.934023 TGTTAGTCCCTCTTGTATTTTGATTT 57.066 30.769 0.00 0.00 0.00 2.17
4947 8514 9.362151 TGTTAGTCCCTCTTGTATTTTGATTTT 57.638 29.630 0.00 0.00 0.00 1.82
4950 8517 8.477419 AGTCCCTCTTGTATTTTGATTTTTGA 57.523 30.769 0.00 0.00 0.00 2.69
4985 8552 9.004717 TGGATCGTAAATTTGACAAGTGAAATA 57.995 29.630 0.00 0.00 0.00 1.40
5100 8677 3.664551 ACAAGAGGGGCTTATAAACCC 57.335 47.619 14.70 14.70 46.24 4.11
5119 8696 2.103941 CCCCAATGGAGAGAGTAGAAGC 59.896 54.545 0.00 0.00 35.39 3.86
5128 8705 4.511082 GGAGAGAGTAGAAGCAATTGCATC 59.489 45.833 30.89 27.54 45.16 3.91
5164 8741 5.704217 GTCTAGGCGACTTTACTTTCATG 57.296 43.478 0.00 0.00 43.67 3.07
5171 8748 3.060895 CGACTTTACTTTCATGGTCGCTC 59.939 47.826 4.39 0.00 39.59 5.03
5181 8758 2.002586 CATGGTCGCTCGATTTTCAGT 58.997 47.619 0.00 0.00 0.00 3.41
5185 8762 5.001237 TGGTCGCTCGATTTTCAGTAATA 57.999 39.130 0.00 0.00 0.00 0.98
5191 8768 8.114290 GTCGCTCGATTTTCAGTAATATTTTCA 58.886 33.333 0.00 0.00 0.00 2.69
5211 8788 8.421673 TTTTCATTTGGTTTACCGGTTTTTAG 57.578 30.769 15.04 0.00 39.43 1.85
5224 8801 7.748691 ACCGGTTTTTAGAGCTTAAAATACA 57.251 32.000 0.00 0.36 0.00 2.29
5226 8803 8.456471 ACCGGTTTTTAGAGCTTAAAATACATC 58.544 33.333 0.00 2.12 0.00 3.06
5243 8820 2.938451 ACATCGAACACTGCCATACATG 59.062 45.455 0.00 0.00 0.00 3.21
5253 8830 3.275143 CTGCCATACATGTTACCGGAAA 58.725 45.455 9.46 0.00 0.00 3.13
5257 8834 5.471797 TGCCATACATGTTACCGGAAATATG 59.528 40.000 9.46 10.12 34.98 1.78
5269 8846 5.855045 ACCGGAAATATGTTCCTACATCTC 58.145 41.667 9.46 0.00 43.81 2.75
5304 8881 4.813750 ATTGAATTTTCTTGCTCTGGGG 57.186 40.909 0.00 0.00 0.00 4.96
5359 8943 2.296190 GCCCCGTCAAATTTTGAGAGTT 59.704 45.455 12.02 0.00 41.01 3.01
5361 8945 4.298332 CCCCGTCAAATTTTGAGAGTTTG 58.702 43.478 12.02 0.00 41.01 2.93
5364 8948 6.460399 CCCCGTCAAATTTTGAGAGTTTGTAA 60.460 38.462 12.02 0.00 41.01 2.41
5392 8976 8.717821 TGGATTCGTATTTGAAAGTAGTTCTTG 58.282 33.333 0.00 0.00 37.13 3.02
5467 9051 8.197439 AGGTGAACTTTGACTCAAAATTTAAGG 58.803 33.333 5.72 0.00 32.75 2.69
5471 9055 6.140377 ACTTTGACTCAAAATTTAAGGGGGA 58.860 36.000 5.72 0.00 32.75 4.81
5493 9077 6.150641 GGGACTTATAAACCCAAACAGAGAAC 59.849 42.308 17.50 0.00 42.81 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.891919 GTGCCAAGTGACAGCGGAA 60.892 57.895 0.00 0.00 0.00 4.30
1 2 2.280797 GTGCCAAGTGACAGCGGA 60.281 61.111 0.00 0.00 0.00 5.54
2 3 2.281070 AGTGCCAAGTGACAGCGG 60.281 61.111 0.00 0.00 0.00 5.52
3 4 2.610694 CCAGTGCCAAGTGACAGCG 61.611 63.158 0.00 0.00 0.00 5.18
4 5 0.607489 ATCCAGTGCCAAGTGACAGC 60.607 55.000 0.00 0.00 0.00 4.40
5 6 1.808945 GAATCCAGTGCCAAGTGACAG 59.191 52.381 0.00 0.00 0.00 3.51
6 7 1.142667 TGAATCCAGTGCCAAGTGACA 59.857 47.619 0.00 0.00 0.00 3.58
7 8 1.537202 GTGAATCCAGTGCCAAGTGAC 59.463 52.381 0.00 0.00 0.00 3.67
8 9 1.142667 TGTGAATCCAGTGCCAAGTGA 59.857 47.619 0.00 0.00 0.00 3.41
9 10 1.608055 TGTGAATCCAGTGCCAAGTG 58.392 50.000 0.00 0.00 0.00 3.16
10 11 2.165167 CATGTGAATCCAGTGCCAAGT 58.835 47.619 0.00 0.00 0.00 3.16
11 12 2.165167 ACATGTGAATCCAGTGCCAAG 58.835 47.619 0.00 0.00 0.00 3.61
12 13 2.291209 ACATGTGAATCCAGTGCCAA 57.709 45.000 0.00 0.00 0.00 4.52
13 14 1.887854 CAACATGTGAATCCAGTGCCA 59.112 47.619 0.00 0.00 0.00 4.92
14 15 1.203052 CCAACATGTGAATCCAGTGCC 59.797 52.381 0.00 0.00 0.00 5.01
15 16 1.888512 ACCAACATGTGAATCCAGTGC 59.111 47.619 0.00 0.00 0.00 4.40
16 17 3.569277 TGAACCAACATGTGAATCCAGTG 59.431 43.478 0.00 0.00 0.00 3.66
17 18 3.831323 TGAACCAACATGTGAATCCAGT 58.169 40.909 0.00 0.00 0.00 4.00
18 19 4.852134 TTGAACCAACATGTGAATCCAG 57.148 40.909 0.00 0.00 0.00 3.86
19 20 6.907853 TTATTGAACCAACATGTGAATCCA 57.092 33.333 0.00 0.00 0.00 3.41
20 21 8.495148 GTTTTTATTGAACCAACATGTGAATCC 58.505 33.333 0.00 0.00 0.00 3.01
21 22 9.039870 TGTTTTTATTGAACCAACATGTGAATC 57.960 29.630 0.00 0.00 0.00 2.52
22 23 8.954950 TGTTTTTATTGAACCAACATGTGAAT 57.045 26.923 0.00 0.00 0.00 2.57
23 24 8.660373 GTTGTTTTTATTGAACCAACATGTGAA 58.340 29.630 0.00 0.00 0.00 3.18
24 25 7.819415 TGTTGTTTTTATTGAACCAACATGTGA 59.181 29.630 0.00 0.00 30.56 3.58
25 26 7.968246 TGTTGTTTTTATTGAACCAACATGTG 58.032 30.769 0.00 0.00 30.56 3.21
26 27 8.553459 TTGTTGTTTTTATTGAACCAACATGT 57.447 26.923 0.00 0.00 33.00 3.21
27 28 9.831737 TTTTGTTGTTTTTATTGAACCAACATG 57.168 25.926 0.00 0.00 33.00 3.21
116 117 9.692749 GAAGATTATTGATACATCTTCGGTGTA 57.307 33.333 5.59 0.00 41.74 2.90
117 118 8.594881 GAAGATTATTGATACATCTTCGGTGT 57.405 34.615 5.59 0.00 41.74 4.16
136 137 9.010029 ACGGTTGTTTTACATCTATTGAAGATT 57.990 29.630 0.00 0.00 42.62 2.40
137 138 8.450964 CACGGTTGTTTTACATCTATTGAAGAT 58.549 33.333 0.00 0.00 46.36 2.40
138 139 7.658167 TCACGGTTGTTTTACATCTATTGAAGA 59.342 33.333 0.00 0.00 39.02 2.87
139 140 7.802738 TCACGGTTGTTTTACATCTATTGAAG 58.197 34.615 0.00 0.00 0.00 3.02
140 141 7.731882 TCACGGTTGTTTTACATCTATTGAA 57.268 32.000 0.00 0.00 0.00 2.69
141 142 7.625395 GCATCACGGTTGTTTTACATCTATTGA 60.625 37.037 0.00 0.00 0.00 2.57
142 143 6.468956 GCATCACGGTTGTTTTACATCTATTG 59.531 38.462 0.00 0.00 0.00 1.90
143 144 6.404293 GGCATCACGGTTGTTTTACATCTATT 60.404 38.462 0.00 0.00 0.00 1.73
144 145 5.065988 GGCATCACGGTTGTTTTACATCTAT 59.934 40.000 0.00 0.00 0.00 1.98
145 146 4.393680 GGCATCACGGTTGTTTTACATCTA 59.606 41.667 0.00 0.00 0.00 1.98
146 147 3.190535 GGCATCACGGTTGTTTTACATCT 59.809 43.478 0.00 0.00 0.00 2.90
147 148 3.057876 TGGCATCACGGTTGTTTTACATC 60.058 43.478 0.00 0.00 0.00 3.06
148 149 2.887783 TGGCATCACGGTTGTTTTACAT 59.112 40.909 0.00 0.00 0.00 2.29
149 150 2.298610 TGGCATCACGGTTGTTTTACA 58.701 42.857 0.00 0.00 0.00 2.41
150 151 3.569250 ATGGCATCACGGTTGTTTTAC 57.431 42.857 0.00 0.00 0.00 2.01
151 152 5.707242 TTTATGGCATCACGGTTGTTTTA 57.293 34.783 1.65 0.00 0.00 1.52
152 153 4.592485 TTTATGGCATCACGGTTGTTTT 57.408 36.364 1.65 0.00 0.00 2.43
153 154 4.592485 TTTTATGGCATCACGGTTGTTT 57.408 36.364 1.65 0.00 0.00 2.83
154 155 4.592485 TTTTTATGGCATCACGGTTGTT 57.408 36.364 1.65 0.00 0.00 2.83
155 156 4.021544 ACATTTTTATGGCATCACGGTTGT 60.022 37.500 1.65 0.00 0.00 3.32
156 157 4.493547 ACATTTTTATGGCATCACGGTTG 58.506 39.130 1.65 0.00 0.00 3.77
157 158 4.674101 CGACATTTTTATGGCATCACGGTT 60.674 41.667 1.65 0.00 0.00 4.44
158 159 3.181501 CGACATTTTTATGGCATCACGGT 60.182 43.478 1.65 0.00 0.00 4.83
159 160 3.362295 CGACATTTTTATGGCATCACGG 58.638 45.455 1.65 0.00 0.00 4.94
160 161 2.783284 GCGACATTTTTATGGCATCACG 59.217 45.455 1.65 1.13 0.00 4.35
161 162 4.032703 AGCGACATTTTTATGGCATCAC 57.967 40.909 1.65 0.00 0.00 3.06
162 163 4.157472 TCAAGCGACATTTTTATGGCATCA 59.843 37.500 1.65 0.00 0.00 3.07
163 164 4.671377 TCAAGCGACATTTTTATGGCATC 58.329 39.130 1.65 0.00 0.00 3.91
164 165 4.717233 TCAAGCGACATTTTTATGGCAT 57.283 36.364 4.88 4.88 0.00 4.40
165 166 4.484236 CTTCAAGCGACATTTTTATGGCA 58.516 39.130 0.00 0.00 0.00 4.92
166 167 3.304293 GCTTCAAGCGACATTTTTATGGC 59.696 43.478 0.00 0.00 0.00 4.40
167 168 4.324402 GTGCTTCAAGCGACATTTTTATGG 59.676 41.667 4.57 0.00 46.26 2.74
168 169 5.156355 AGTGCTTCAAGCGACATTTTTATG 58.844 37.500 4.57 0.00 46.26 1.90
169 170 5.376854 AGTGCTTCAAGCGACATTTTTAT 57.623 34.783 4.57 0.00 46.26 1.40
170 171 4.829064 AGTGCTTCAAGCGACATTTTTA 57.171 36.364 4.57 0.00 46.26 1.52
171 172 3.715628 AGTGCTTCAAGCGACATTTTT 57.284 38.095 4.57 0.00 46.26 1.94
172 173 3.715628 AAGTGCTTCAAGCGACATTTT 57.284 38.095 4.57 0.00 46.26 1.82
173 174 3.715628 AAAGTGCTTCAAGCGACATTT 57.284 38.095 4.57 0.21 46.26 2.32
174 175 3.715628 AAAAGTGCTTCAAGCGACATT 57.284 38.095 4.57 1.12 46.26 2.71
175 176 4.065088 TCTAAAAGTGCTTCAAGCGACAT 58.935 39.130 4.57 0.00 46.26 3.06
176 177 3.247648 GTCTAAAAGTGCTTCAAGCGACA 59.752 43.478 4.57 0.00 46.26 4.35
177 178 3.364068 GGTCTAAAAGTGCTTCAAGCGAC 60.364 47.826 4.57 3.92 46.26 5.19
178 179 2.806244 GGTCTAAAAGTGCTTCAAGCGA 59.194 45.455 4.57 0.00 46.26 4.93
179 180 2.808543 AGGTCTAAAAGTGCTTCAAGCG 59.191 45.455 4.57 0.00 46.26 4.68
180 181 5.238583 TCTAGGTCTAAAAGTGCTTCAAGC 58.761 41.667 1.04 1.04 42.82 4.01
181 182 7.730364 TTTCTAGGTCTAAAAGTGCTTCAAG 57.270 36.000 0.00 0.00 0.00 3.02
182 183 8.691661 AATTTCTAGGTCTAAAAGTGCTTCAA 57.308 30.769 0.00 0.00 0.00 2.69
183 184 7.936847 TGAATTTCTAGGTCTAAAAGTGCTTCA 59.063 33.333 0.00 0.00 0.00 3.02
184 185 8.324163 TGAATTTCTAGGTCTAAAAGTGCTTC 57.676 34.615 0.00 0.00 0.00 3.86
185 186 8.157476 TCTGAATTTCTAGGTCTAAAAGTGCTT 58.843 33.333 0.00 0.00 0.00 3.91
186 187 7.604545 GTCTGAATTTCTAGGTCTAAAAGTGCT 59.395 37.037 0.00 0.00 0.00 4.40
187 188 7.148390 GGTCTGAATTTCTAGGTCTAAAAGTGC 60.148 40.741 0.00 0.00 0.00 4.40
188 189 7.334671 GGGTCTGAATTTCTAGGTCTAAAAGTG 59.665 40.741 0.00 0.00 0.00 3.16
189 190 7.017254 TGGGTCTGAATTTCTAGGTCTAAAAGT 59.983 37.037 0.00 0.00 0.00 2.66
190 191 7.394816 TGGGTCTGAATTTCTAGGTCTAAAAG 58.605 38.462 0.00 0.00 0.00 2.27
191 192 7.324388 TGGGTCTGAATTTCTAGGTCTAAAA 57.676 36.000 0.00 0.00 0.00 1.52
192 193 6.945636 TGGGTCTGAATTTCTAGGTCTAAA 57.054 37.500 0.00 0.00 0.00 1.85
193 194 6.271391 TGTTGGGTCTGAATTTCTAGGTCTAA 59.729 38.462 0.00 0.00 0.00 2.10
194 195 5.783360 TGTTGGGTCTGAATTTCTAGGTCTA 59.217 40.000 0.00 0.00 0.00 2.59
195 196 4.597507 TGTTGGGTCTGAATTTCTAGGTCT 59.402 41.667 0.00 0.00 0.00 3.85
196 197 4.906618 TGTTGGGTCTGAATTTCTAGGTC 58.093 43.478 0.00 0.00 0.00 3.85
197 198 4.993705 TGTTGGGTCTGAATTTCTAGGT 57.006 40.909 0.00 0.00 0.00 3.08
198 199 6.434028 TCATTTGTTGGGTCTGAATTTCTAGG 59.566 38.462 0.00 0.00 0.00 3.02
199 200 7.452880 TCATTTGTTGGGTCTGAATTTCTAG 57.547 36.000 0.00 0.00 0.00 2.43
200 201 7.577426 GCATCATTTGTTGGGTCTGAATTTCTA 60.577 37.037 0.00 0.00 0.00 2.10
201 202 6.694447 CATCATTTGTTGGGTCTGAATTTCT 58.306 36.000 0.00 0.00 0.00 2.52
202 203 5.349543 GCATCATTTGTTGGGTCTGAATTTC 59.650 40.000 0.00 0.00 0.00 2.17
203 204 5.221682 TGCATCATTTGTTGGGTCTGAATTT 60.222 36.000 0.00 0.00 0.00 1.82
204 205 4.283978 TGCATCATTTGTTGGGTCTGAATT 59.716 37.500 0.00 0.00 0.00 2.17
205 206 3.833650 TGCATCATTTGTTGGGTCTGAAT 59.166 39.130 0.00 0.00 0.00 2.57
206 207 3.229293 TGCATCATTTGTTGGGTCTGAA 58.771 40.909 0.00 0.00 0.00 3.02
207 208 2.874014 TGCATCATTTGTTGGGTCTGA 58.126 42.857 0.00 0.00 0.00 3.27
208 209 3.446161 AGATGCATCATTTGTTGGGTCTG 59.554 43.478 27.81 0.00 0.00 3.51
209 210 3.698040 GAGATGCATCATTTGTTGGGTCT 59.302 43.478 27.81 3.23 0.00 3.85
210 211 3.698040 AGAGATGCATCATTTGTTGGGTC 59.302 43.478 27.81 12.50 0.00 4.46
211 212 3.705051 AGAGATGCATCATTTGTTGGGT 58.295 40.909 27.81 3.39 0.00 4.51
212 213 6.401047 AATAGAGATGCATCATTTGTTGGG 57.599 37.500 27.81 0.00 0.00 4.12
213 214 6.700081 CCAAATAGAGATGCATCATTTGTTGG 59.300 38.462 29.96 27.45 35.70 3.77
214 215 7.222031 CACCAAATAGAGATGCATCATTTGTTG 59.778 37.037 29.96 26.34 35.70 3.33
215 216 7.123098 TCACCAAATAGAGATGCATCATTTGTT 59.877 33.333 29.96 22.20 35.70 2.83
216 217 6.604396 TCACCAAATAGAGATGCATCATTTGT 59.396 34.615 29.96 21.82 35.70 2.83
217 218 7.034685 TCACCAAATAGAGATGCATCATTTG 57.965 36.000 27.89 27.89 36.70 2.32
218 219 7.504574 TCATCACCAAATAGAGATGCATCATTT 59.495 33.333 27.81 20.33 38.15 2.32
219 220 7.002276 TCATCACCAAATAGAGATGCATCATT 58.998 34.615 27.81 15.90 38.15 2.57
220 221 6.540083 TCATCACCAAATAGAGATGCATCAT 58.460 36.000 27.81 17.95 38.15 2.45
221 222 5.932455 TCATCACCAAATAGAGATGCATCA 58.068 37.500 27.81 8.60 38.15 3.07
222 223 6.872628 TTCATCACCAAATAGAGATGCATC 57.127 37.500 19.37 19.37 38.15 3.91
223 224 7.724506 AGATTTCATCACCAAATAGAGATGCAT 59.275 33.333 0.00 0.00 38.15 3.96
224 225 7.058525 AGATTTCATCACCAAATAGAGATGCA 58.941 34.615 0.00 0.00 38.15 3.96
225 226 7.507733 AGATTTCATCACCAAATAGAGATGC 57.492 36.000 0.00 0.00 38.15 3.91
226 227 9.339850 AGAAGATTTCATCACCAAATAGAGATG 57.660 33.333 0.00 0.00 39.29 2.90
227 228 9.917887 AAGAAGATTTCATCACCAAATAGAGAT 57.082 29.630 0.00 0.00 0.00 2.75
228 229 9.745018 AAAGAAGATTTCATCACCAAATAGAGA 57.255 29.630 0.00 0.00 0.00 3.10
229 230 9.784680 CAAAGAAGATTTCATCACCAAATAGAG 57.215 33.333 0.00 0.00 0.00 2.43
230 231 9.519191 TCAAAGAAGATTTCATCACCAAATAGA 57.481 29.630 0.00 0.00 0.00 1.98
233 234 9.264719 GTTTCAAAGAAGATTTCATCACCAAAT 57.735 29.630 0.00 0.00 0.00 2.32
234 235 7.710475 GGTTTCAAAGAAGATTTCATCACCAAA 59.290 33.333 0.00 0.00 0.00 3.28
235 236 7.209475 GGTTTCAAAGAAGATTTCATCACCAA 58.791 34.615 0.00 0.00 0.00 3.67
236 237 6.239289 GGGTTTCAAAGAAGATTTCATCACCA 60.239 38.462 0.00 0.00 0.00 4.17
237 238 6.015095 AGGGTTTCAAAGAAGATTTCATCACC 60.015 38.462 0.00 0.00 0.00 4.02
238 239 6.986250 AGGGTTTCAAAGAAGATTTCATCAC 58.014 36.000 0.00 0.00 0.00 3.06
239 240 6.777091 TGAGGGTTTCAAAGAAGATTTCATCA 59.223 34.615 0.00 0.00 31.34 3.07
240 241 7.219484 TGAGGGTTTCAAAGAAGATTTCATC 57.781 36.000 0.00 0.00 31.34 2.92
241 242 7.601705 TTGAGGGTTTCAAAGAAGATTTCAT 57.398 32.000 0.00 0.00 42.69 2.57
254 255 3.580895 GGGGCTAAAAATTGAGGGTTTCA 59.419 43.478 0.00 0.00 0.00 2.69
255 256 3.580895 TGGGGCTAAAAATTGAGGGTTTC 59.419 43.478 0.00 0.00 0.00 2.78
256 257 3.592865 TGGGGCTAAAAATTGAGGGTTT 58.407 40.909 0.00 0.00 0.00 3.27
257 258 3.268034 TGGGGCTAAAAATTGAGGGTT 57.732 42.857 0.00 0.00 0.00 4.11
258 259 3.173151 CTTGGGGCTAAAAATTGAGGGT 58.827 45.455 0.00 0.00 0.00 4.34
259 260 3.055891 CACTTGGGGCTAAAAATTGAGGG 60.056 47.826 0.00 0.00 0.00 4.30
260 261 3.617288 GCACTTGGGGCTAAAAATTGAGG 60.617 47.826 0.00 0.00 0.00 3.86
261 262 3.259123 AGCACTTGGGGCTAAAAATTGAG 59.741 43.478 0.00 0.00 40.47 3.02
262 263 3.006752 CAGCACTTGGGGCTAAAAATTGA 59.993 43.478 0.00 0.00 40.23 2.57
263 264 3.328505 CAGCACTTGGGGCTAAAAATTG 58.671 45.455 0.00 0.00 40.23 2.32
264 265 2.289631 GCAGCACTTGGGGCTAAAAATT 60.290 45.455 0.00 0.00 40.23 1.82
265 266 1.276138 GCAGCACTTGGGGCTAAAAAT 59.724 47.619 0.00 0.00 40.23 1.82
266 267 0.678950 GCAGCACTTGGGGCTAAAAA 59.321 50.000 0.00 0.00 40.23 1.94
267 268 0.468958 TGCAGCACTTGGGGCTAAAA 60.469 50.000 0.00 0.00 40.23 1.52
268 269 0.468958 TTGCAGCACTTGGGGCTAAA 60.469 50.000 0.00 0.00 40.23 1.85
269 270 0.468958 TTTGCAGCACTTGGGGCTAA 60.469 50.000 0.00 0.00 40.23 3.09
270 271 0.251742 ATTTGCAGCACTTGGGGCTA 60.252 50.000 0.00 0.00 40.23 3.93
271 272 1.123246 AATTTGCAGCACTTGGGGCT 61.123 50.000 0.00 0.00 43.77 5.19
272 273 0.250424 AAATTTGCAGCACTTGGGGC 60.250 50.000 0.00 0.00 0.00 5.80
273 274 1.874872 CAAAATTTGCAGCACTTGGGG 59.125 47.619 0.00 0.00 0.00 4.96
274 275 2.836262 TCAAAATTTGCAGCACTTGGG 58.164 42.857 0.00 0.00 0.00 4.12
275 276 3.622163 TGTTCAAAATTTGCAGCACTTGG 59.378 39.130 0.00 0.00 0.00 3.61
276 277 4.828704 CTGTTCAAAATTTGCAGCACTTG 58.171 39.130 0.00 0.00 0.00 3.16
282 283 4.620184 GCTAGAGCTGTTCAAAATTTGCAG 59.380 41.667 0.00 5.07 38.21 4.41
283 284 4.549458 GCTAGAGCTGTTCAAAATTTGCA 58.451 39.130 0.00 0.00 38.21 4.08
284 285 3.605486 CGCTAGAGCTGTTCAAAATTTGC 59.395 43.478 0.00 0.00 39.32 3.68
285 286 4.161333 CCGCTAGAGCTGTTCAAAATTTG 58.839 43.478 0.00 0.00 39.32 2.32
286 287 3.821033 ACCGCTAGAGCTGTTCAAAATTT 59.179 39.130 0.00 0.00 34.87 1.82
287 288 3.412386 ACCGCTAGAGCTGTTCAAAATT 58.588 40.909 0.00 0.00 34.87 1.82
288 289 3.059352 ACCGCTAGAGCTGTTCAAAAT 57.941 42.857 0.00 0.00 34.87 1.82
289 290 2.543777 ACCGCTAGAGCTGTTCAAAA 57.456 45.000 0.00 0.00 34.87 2.44
290 291 2.143122 CAACCGCTAGAGCTGTTCAAA 58.857 47.619 8.19 0.00 44.62 2.69
291 292 1.795768 CAACCGCTAGAGCTGTTCAA 58.204 50.000 8.19 0.00 44.62 2.69
292 293 0.670546 GCAACCGCTAGAGCTGTTCA 60.671 55.000 8.19 0.00 44.62 3.18
293 294 1.362406 GGCAACCGCTAGAGCTGTTC 61.362 60.000 8.19 4.66 44.62 3.18
294 295 1.376037 GGCAACCGCTAGAGCTGTT 60.376 57.895 5.59 5.59 46.76 3.16
295 296 2.266055 GGCAACCGCTAGAGCTGT 59.734 61.111 0.00 0.00 40.20 4.40
307 308 3.249799 GCACTATTTTGGTTTTGGGCAAC 59.750 43.478 0.00 0.00 0.00 4.17
308 309 3.471680 GCACTATTTTGGTTTTGGGCAA 58.528 40.909 0.00 0.00 0.00 4.52
309 310 2.546795 CGCACTATTTTGGTTTTGGGCA 60.547 45.455 0.00 0.00 0.00 5.36
310 311 2.065512 CGCACTATTTTGGTTTTGGGC 58.934 47.619 0.00 0.00 0.00 5.36
311 312 2.611722 CCCGCACTATTTTGGTTTTGGG 60.612 50.000 0.00 0.00 0.00 4.12
312 313 2.682836 CCCGCACTATTTTGGTTTTGG 58.317 47.619 0.00 0.00 0.00 3.28
313 314 2.065512 GCCCGCACTATTTTGGTTTTG 58.934 47.619 0.00 0.00 0.00 2.44
314 315 1.336424 CGCCCGCACTATTTTGGTTTT 60.336 47.619 0.00 0.00 0.00 2.43
315 316 0.242555 CGCCCGCACTATTTTGGTTT 59.757 50.000 0.00 0.00 0.00 3.27
316 317 1.591504 CCGCCCGCACTATTTTGGTT 61.592 55.000 0.00 0.00 0.00 3.67
317 318 2.043980 CCGCCCGCACTATTTTGGT 61.044 57.895 0.00 0.00 0.00 3.67
318 319 2.770589 CCCGCCCGCACTATTTTGG 61.771 63.158 0.00 0.00 0.00 3.28
319 320 1.309499 TTCCCGCCCGCACTATTTTG 61.309 55.000 0.00 0.00 0.00 2.44
320 321 1.001887 TTCCCGCCCGCACTATTTT 60.002 52.632 0.00 0.00 0.00 1.82
321 322 1.747745 GTTCCCGCCCGCACTATTT 60.748 57.895 0.00 0.00 0.00 1.40
322 323 2.124860 GTTCCCGCCCGCACTATT 60.125 61.111 0.00 0.00 0.00 1.73
323 324 4.171103 GGTTCCCGCCCGCACTAT 62.171 66.667 0.00 0.00 0.00 2.12
333 334 2.675075 ATGGCGTTTGGGTTCCCG 60.675 61.111 3.27 0.00 0.00 5.14
334 335 2.969827 CATGGCGTTTGGGTTCCC 59.030 61.111 0.12 0.12 0.00 3.97
335 336 2.261361 GCATGGCGTTTGGGTTCC 59.739 61.111 0.00 0.00 0.00 3.62
336 337 1.080569 CAGCATGGCGTTTGGGTTC 60.081 57.895 0.00 0.00 0.00 3.62
337 338 1.112315 TTCAGCATGGCGTTTGGGTT 61.112 50.000 0.00 0.00 36.16 4.11
338 339 1.112315 TTTCAGCATGGCGTTTGGGT 61.112 50.000 0.00 0.00 36.16 4.51
339 340 0.667184 GTTTCAGCATGGCGTTTGGG 60.667 55.000 0.00 0.00 36.16 4.12
340 341 0.314935 AGTTTCAGCATGGCGTTTGG 59.685 50.000 0.00 0.00 36.16 3.28
341 342 2.138596 AAGTTTCAGCATGGCGTTTG 57.861 45.000 0.00 0.00 36.16 2.93
342 343 2.100584 TGAAAGTTTCAGCATGGCGTTT 59.899 40.909 14.35 0.00 36.16 3.60
343 344 1.680735 TGAAAGTTTCAGCATGGCGTT 59.319 42.857 14.35 0.00 36.16 4.84
344 345 1.001378 GTGAAAGTTTCAGCATGGCGT 60.001 47.619 18.56 0.00 41.01 5.68
345 346 1.689959 GTGAAAGTTTCAGCATGGCG 58.310 50.000 18.56 0.00 41.01 5.69
346 347 1.689959 CGTGAAAGTTTCAGCATGGC 58.310 50.000 18.56 5.19 41.01 4.40
347 348 1.666888 GGCGTGAAAGTTTCAGCATGG 60.667 52.381 26.73 14.54 41.01 3.66
348 349 1.689959 GGCGTGAAAGTTTCAGCATG 58.310 50.000 26.73 16.66 41.01 4.06
349 350 0.238289 CGGCGTGAAAGTTTCAGCAT 59.762 50.000 26.73 0.00 41.01 3.79
350 351 1.092921 ACGGCGTGAAAGTTTCAGCA 61.093 50.000 26.73 6.82 41.01 4.41
351 352 0.028902 AACGGCGTGAAAGTTTCAGC 59.971 50.000 18.56 20.58 41.01 4.26
352 353 1.329292 TGAACGGCGTGAAAGTTTCAG 59.671 47.619 18.56 13.15 41.01 3.02
353 354 1.370609 TGAACGGCGTGAAAGTTTCA 58.629 45.000 15.70 14.35 37.33 2.69
354 355 2.461897 TTGAACGGCGTGAAAGTTTC 57.538 45.000 15.70 8.75 0.00 2.78
355 356 2.356382 TGATTGAACGGCGTGAAAGTTT 59.644 40.909 15.70 0.00 0.00 2.66
356 357 1.944024 TGATTGAACGGCGTGAAAGTT 59.056 42.857 15.70 0.00 0.00 2.66
357 358 1.263217 GTGATTGAACGGCGTGAAAGT 59.737 47.619 15.70 0.00 0.00 2.66
358 359 1.399727 GGTGATTGAACGGCGTGAAAG 60.400 52.381 15.70 0.00 0.00 2.62
359 360 0.589223 GGTGATTGAACGGCGTGAAA 59.411 50.000 15.70 12.02 0.00 2.69
360 361 1.561717 CGGTGATTGAACGGCGTGAA 61.562 55.000 15.70 10.54 0.00 3.18
361 362 2.024868 CGGTGATTGAACGGCGTGA 61.025 57.895 15.70 2.91 0.00 4.35
362 363 1.837538 AACGGTGATTGAACGGCGTG 61.838 55.000 15.70 0.00 0.00 5.34
363 364 1.562575 GAACGGTGATTGAACGGCGT 61.563 55.000 6.77 6.77 0.00 5.68
364 365 1.131826 GAACGGTGATTGAACGGCG 59.868 57.895 4.80 4.80 0.00 6.46
365 366 1.131826 CGAACGGTGATTGAACGGC 59.868 57.895 0.00 0.00 0.00 5.68
366 367 0.437295 GTCGAACGGTGATTGAACGG 59.563 55.000 0.00 0.00 0.00 4.44
367 368 0.437295 GGTCGAACGGTGATTGAACG 59.563 55.000 0.00 0.00 0.00 3.95
368 369 1.459592 CTGGTCGAACGGTGATTGAAC 59.540 52.381 0.00 0.00 0.00 3.18
369 370 1.341852 TCTGGTCGAACGGTGATTGAA 59.658 47.619 9.59 0.00 0.00 2.69
370 371 0.963225 TCTGGTCGAACGGTGATTGA 59.037 50.000 9.59 0.00 0.00 2.57
371 372 1.068474 GTCTGGTCGAACGGTGATTG 58.932 55.000 9.59 0.00 0.00 2.67
372 373 0.677288 TGTCTGGTCGAACGGTGATT 59.323 50.000 9.59 0.00 0.00 2.57
373 374 0.895530 ATGTCTGGTCGAACGGTGAT 59.104 50.000 9.59 0.00 0.00 3.06
374 375 0.677288 AATGTCTGGTCGAACGGTGA 59.323 50.000 9.59 0.00 0.00 4.02
375 376 1.068474 GAATGTCTGGTCGAACGGTG 58.932 55.000 9.59 0.00 0.00 4.94
376 377 0.966920 AGAATGTCTGGTCGAACGGT 59.033 50.000 9.59 0.00 0.00 4.83
377 378 1.630148 GAGAATGTCTGGTCGAACGG 58.370 55.000 1.75 1.75 0.00 4.44
378 379 1.260206 CGAGAATGTCTGGTCGAACG 58.740 55.000 0.00 0.00 34.28 3.95
379 380 0.992802 GCGAGAATGTCTGGTCGAAC 59.007 55.000 0.00 0.00 34.28 3.95
380 381 0.108804 GGCGAGAATGTCTGGTCGAA 60.109 55.000 0.00 0.00 34.28 3.71
381 382 1.248101 TGGCGAGAATGTCTGGTCGA 61.248 55.000 0.00 0.00 28.87 4.20
382 383 1.078759 GTGGCGAGAATGTCTGGTCG 61.079 60.000 0.00 0.00 28.87 4.79
383 384 0.741221 GGTGGCGAGAATGTCTGGTC 60.741 60.000 0.00 0.00 0.00 4.02
384 385 1.296715 GGTGGCGAGAATGTCTGGT 59.703 57.895 0.00 0.00 0.00 4.00
385 386 0.321564 TTGGTGGCGAGAATGTCTGG 60.322 55.000 0.00 0.00 0.00 3.86
386 387 0.798776 GTTGGTGGCGAGAATGTCTG 59.201 55.000 0.00 0.00 0.00 3.51
387 388 0.687354 AGTTGGTGGCGAGAATGTCT 59.313 50.000 0.00 0.00 0.00 3.41
388 389 0.798776 CAGTTGGTGGCGAGAATGTC 59.201 55.000 0.00 0.00 0.00 3.06
389 390 1.237285 GCAGTTGGTGGCGAGAATGT 61.237 55.000 0.00 0.00 0.00 2.71
390 391 1.503542 GCAGTTGGTGGCGAGAATG 59.496 57.895 0.00 0.00 0.00 2.67
391 392 1.675641 GGCAGTTGGTGGCGAGAAT 60.676 57.895 0.00 0.00 42.77 2.40
392 393 2.281484 GGCAGTTGGTGGCGAGAA 60.281 61.111 0.00 0.00 42.77 2.87
407 408 3.885521 GAGAGCGGCTGCAATGGC 61.886 66.667 21.93 3.25 46.23 4.40
408 409 3.570638 CGAGAGCGGCTGCAATGG 61.571 66.667 21.93 4.87 46.23 3.16
425 426 4.699522 AAGGTTGGGAGCGGTCGC 62.700 66.667 23.15 23.15 42.33 5.19
426 427 2.742372 CAAGGTTGGGAGCGGTCG 60.742 66.667 8.77 0.00 0.00 4.79
427 428 3.056328 GCAAGGTTGGGAGCGGTC 61.056 66.667 5.93 5.93 0.00 4.79
428 429 4.660938 GGCAAGGTTGGGAGCGGT 62.661 66.667 0.00 0.00 0.00 5.68
432 433 2.747855 GAGCGGCAAGGTTGGGAG 60.748 66.667 1.45 0.00 0.00 4.30
433 434 4.697756 CGAGCGGCAAGGTTGGGA 62.698 66.667 1.45 0.00 0.00 4.37
435 436 2.966309 GAACGAGCGGCAAGGTTGG 61.966 63.158 1.45 0.00 36.07 3.77
436 437 1.577328 ATGAACGAGCGGCAAGGTTG 61.577 55.000 1.45 0.00 37.73 3.77
437 438 1.302511 ATGAACGAGCGGCAAGGTT 60.303 52.632 1.45 2.71 0.00 3.50
438 439 2.034879 CATGAACGAGCGGCAAGGT 61.035 57.895 1.45 0.00 0.00 3.50
439 440 1.970917 GACATGAACGAGCGGCAAGG 61.971 60.000 0.00 0.00 0.00 3.61
440 441 1.421485 GACATGAACGAGCGGCAAG 59.579 57.895 0.00 0.00 0.00 4.01
441 442 2.379634 CGACATGAACGAGCGGCAA 61.380 57.895 0.00 0.00 0.00 4.52
442 443 2.809174 CGACATGAACGAGCGGCA 60.809 61.111 0.00 0.00 0.00 5.69
443 444 3.554692 CCGACATGAACGAGCGGC 61.555 66.667 15.70 0.00 35.17 6.53
444 445 3.554692 GCCGACATGAACGAGCGG 61.555 66.667 15.70 11.27 44.47 5.52
445 446 3.554692 GGCCGACATGAACGAGCG 61.555 66.667 15.70 0.00 0.00 5.03
446 447 1.970917 CTTGGCCGACATGAACGAGC 61.971 60.000 15.70 15.46 0.00 5.03
447 448 0.389817 TCTTGGCCGACATGAACGAG 60.390 55.000 15.70 7.52 31.07 4.18
448 449 0.249120 ATCTTGGCCGACATGAACGA 59.751 50.000 15.70 0.00 36.90 3.85
449 450 1.934589 TATCTTGGCCGACATGAACG 58.065 50.000 0.00 4.84 36.90 3.95
450 451 3.059597 CGATTATCTTGGCCGACATGAAC 60.060 47.826 0.00 0.00 36.90 3.18
451 452 3.130633 CGATTATCTTGGCCGACATGAA 58.869 45.455 0.00 0.00 36.90 2.57
452 453 2.754472 CGATTATCTTGGCCGACATGA 58.246 47.619 0.00 0.00 37.61 3.07
453 454 1.195448 GCGATTATCTTGGCCGACATG 59.805 52.381 0.00 0.00 0.00 3.21
454 455 1.512926 GCGATTATCTTGGCCGACAT 58.487 50.000 0.00 0.00 0.00 3.06
455 456 0.531974 GGCGATTATCTTGGCCGACA 60.532 55.000 0.00 0.00 35.59 4.35
456 457 2.235546 GGCGATTATCTTGGCCGAC 58.764 57.895 0.00 0.00 35.59 4.79
457 458 4.771127 GGCGATTATCTTGGCCGA 57.229 55.556 0.00 0.00 35.59 5.54
459 460 0.108585 TCCTGGCGATTATCTTGGCC 59.891 55.000 0.00 0.00 45.76 5.36
460 461 1.230324 GTCCTGGCGATTATCTTGGC 58.770 55.000 0.00 0.00 0.00 4.52
461 462 1.543429 GGGTCCTGGCGATTATCTTGG 60.543 57.143 0.00 0.00 0.00 3.61
462 463 1.543429 GGGGTCCTGGCGATTATCTTG 60.543 57.143 0.00 0.00 0.00 3.02
463 464 0.765510 GGGGTCCTGGCGATTATCTT 59.234 55.000 0.00 0.00 0.00 2.40
464 465 1.472662 CGGGGTCCTGGCGATTATCT 61.473 60.000 0.00 0.00 0.00 1.98
465 466 1.004918 CGGGGTCCTGGCGATTATC 60.005 63.158 0.00 0.00 0.00 1.75
466 467 1.755393 GACGGGGTCCTGGCGATTAT 61.755 60.000 0.48 0.00 0.00 1.28
467 468 2.364579 ACGGGGTCCTGGCGATTA 60.365 61.111 0.48 0.00 0.00 1.75
468 469 3.782443 GACGGGGTCCTGGCGATT 61.782 66.667 0.48 0.00 0.00 3.34
480 481 4.124351 TTCTACGGCAGCGACGGG 62.124 66.667 8.57 1.69 39.02 5.28
481 482 2.579787 CTTCTACGGCAGCGACGG 60.580 66.667 8.57 0.00 39.02 4.79
482 483 3.248171 GCTTCTACGGCAGCGACG 61.248 66.667 2.24 2.24 41.40 5.12
483 484 2.886124 GGCTTCTACGGCAGCGAC 60.886 66.667 0.00 0.00 36.85 5.19
484 485 4.143333 GGGCTTCTACGGCAGCGA 62.143 66.667 0.00 0.00 36.85 4.93
491 492 1.381928 TAGCACTCCGGGCTTCTACG 61.382 60.000 9.06 0.00 42.62 3.51
492 493 0.102663 GTAGCACTCCGGGCTTCTAC 59.897 60.000 9.06 8.65 42.62 2.59
493 494 1.041447 GGTAGCACTCCGGGCTTCTA 61.041 60.000 9.06 0.14 42.62 2.10
494 495 2.359967 GGTAGCACTCCGGGCTTCT 61.360 63.158 9.06 1.08 42.62 2.85
495 496 2.187163 GGTAGCACTCCGGGCTTC 59.813 66.667 9.06 4.27 42.62 3.86
496 497 3.771160 CGGTAGCACTCCGGGCTT 61.771 66.667 9.06 0.00 43.68 4.35
502 503 1.557651 GAAATCGACGGTAGCACTCC 58.442 55.000 0.00 0.00 0.00 3.85
503 504 1.189403 CGAAATCGACGGTAGCACTC 58.811 55.000 0.00 0.00 43.02 3.51
504 505 0.524862 ACGAAATCGACGGTAGCACT 59.475 50.000 10.16 0.00 43.02 4.40
505 506 0.912528 GACGAAATCGACGGTAGCAC 59.087 55.000 10.16 0.00 43.02 4.40
506 507 0.179156 GGACGAAATCGACGGTAGCA 60.179 55.000 10.16 0.00 43.02 3.49
507 508 0.179156 TGGACGAAATCGACGGTAGC 60.179 55.000 10.16 0.00 43.02 3.58
508 509 2.486951 ATGGACGAAATCGACGGTAG 57.513 50.000 10.16 0.00 43.02 3.18
509 510 2.480073 GGAATGGACGAAATCGACGGTA 60.480 50.000 10.16 0.00 43.02 4.02
510 511 1.636988 GAATGGACGAAATCGACGGT 58.363 50.000 10.16 0.00 43.02 4.83
511 512 0.928229 GGAATGGACGAAATCGACGG 59.072 55.000 10.16 0.00 43.02 4.79
512 513 0.928229 GGGAATGGACGAAATCGACG 59.072 55.000 10.16 0.00 43.02 5.12
513 514 0.928229 CGGGAATGGACGAAATCGAC 59.072 55.000 10.16 3.09 43.02 4.20
514 515 0.808453 GCGGGAATGGACGAAATCGA 60.808 55.000 10.16 0.00 43.02 3.59
515 516 1.641677 GCGGGAATGGACGAAATCG 59.358 57.895 0.48 0.48 46.33 3.34
516 517 0.746563 TGGCGGGAATGGACGAAATC 60.747 55.000 0.00 0.00 0.00 2.17
517 518 1.029947 GTGGCGGGAATGGACGAAAT 61.030 55.000 0.00 0.00 0.00 2.17
518 519 1.673009 GTGGCGGGAATGGACGAAA 60.673 57.895 0.00 0.00 0.00 3.46
519 520 2.046700 GTGGCGGGAATGGACGAA 60.047 61.111 0.00 0.00 0.00 3.85
520 521 4.090588 GGTGGCGGGAATGGACGA 62.091 66.667 0.00 0.00 0.00 4.20
521 522 4.096003 AGGTGGCGGGAATGGACG 62.096 66.667 0.00 0.00 0.00 4.79
522 523 2.124695 GAGGTGGCGGGAATGGAC 60.125 66.667 0.00 0.00 0.00 4.02
523 524 3.407967 GGAGGTGGCGGGAATGGA 61.408 66.667 0.00 0.00 0.00 3.41
524 525 3.727258 TGGAGGTGGCGGGAATGG 61.727 66.667 0.00 0.00 0.00 3.16
525 526 2.438434 GTGGAGGTGGCGGGAATG 60.438 66.667 0.00 0.00 0.00 2.67
526 527 3.728373 GGTGGAGGTGGCGGGAAT 61.728 66.667 0.00 0.00 0.00 3.01
530 531 3.953775 AAGTGGTGGAGGTGGCGG 61.954 66.667 0.00 0.00 0.00 6.13
531 532 2.669569 CAAGTGGTGGAGGTGGCG 60.670 66.667 0.00 0.00 0.00 5.69
540 541 2.993899 GTGACGACTATTCCAAGTGGTG 59.006 50.000 0.00 0.00 38.38 4.17
541 542 2.897969 AGTGACGACTATTCCAAGTGGT 59.102 45.455 0.00 0.00 40.60 4.16
542 543 3.254060 CAGTGACGACTATTCCAAGTGG 58.746 50.000 0.00 0.00 0.00 4.00
543 544 3.056821 TCCAGTGACGACTATTCCAAGTG 60.057 47.826 0.00 0.00 0.00 3.16
544 545 3.162666 TCCAGTGACGACTATTCCAAGT 58.837 45.455 0.00 0.00 0.00 3.16
545 546 3.868757 TCCAGTGACGACTATTCCAAG 57.131 47.619 0.00 0.00 0.00 3.61
546 547 3.767131 TGATCCAGTGACGACTATTCCAA 59.233 43.478 0.00 0.00 0.00 3.53
547 548 3.130516 GTGATCCAGTGACGACTATTCCA 59.869 47.826 0.00 0.00 0.00 3.53
548 549 3.491104 GGTGATCCAGTGACGACTATTCC 60.491 52.174 0.00 0.00 0.00 3.01
549 550 3.130516 TGGTGATCCAGTGACGACTATTC 59.869 47.826 0.00 0.00 39.03 1.75
550 551 3.096852 TGGTGATCCAGTGACGACTATT 58.903 45.455 0.00 0.00 39.03 1.73
551 552 2.735151 TGGTGATCCAGTGACGACTAT 58.265 47.619 0.00 0.00 39.03 2.12
552 553 2.209690 TGGTGATCCAGTGACGACTA 57.790 50.000 0.00 0.00 39.03 2.59
553 554 3.051617 TGGTGATCCAGTGACGACT 57.948 52.632 0.00 0.00 39.03 4.18
563 564 2.544685 CTCAGTGTTCGATGGTGATCC 58.455 52.381 0.00 0.00 0.00 3.36
564 565 2.093973 ACCTCAGTGTTCGATGGTGATC 60.094 50.000 0.00 0.00 0.00 2.92
565 566 1.902508 ACCTCAGTGTTCGATGGTGAT 59.097 47.619 0.00 0.00 0.00 3.06
566 567 1.272490 GACCTCAGTGTTCGATGGTGA 59.728 52.381 0.00 0.00 0.00 4.02
567 568 1.000843 TGACCTCAGTGTTCGATGGTG 59.999 52.381 0.00 0.00 0.00 4.17
568 569 1.338107 TGACCTCAGTGTTCGATGGT 58.662 50.000 0.00 0.00 0.00 3.55
569 570 2.455674 TTGACCTCAGTGTTCGATGG 57.544 50.000 0.00 0.00 0.00 3.51
570 571 4.033358 GCTAATTGACCTCAGTGTTCGATG 59.967 45.833 0.00 0.00 0.00 3.84
571 572 4.184629 GCTAATTGACCTCAGTGTTCGAT 58.815 43.478 0.00 0.00 0.00 3.59
572 573 3.585862 GCTAATTGACCTCAGTGTTCGA 58.414 45.455 0.00 0.00 0.00 3.71
573 574 2.345641 CGCTAATTGACCTCAGTGTTCG 59.654 50.000 0.00 0.00 0.00 3.95
574 575 2.673368 CCGCTAATTGACCTCAGTGTTC 59.327 50.000 0.00 0.00 0.00 3.18
575 576 2.699954 CCGCTAATTGACCTCAGTGTT 58.300 47.619 0.00 0.00 0.00 3.32
576 577 1.676014 GCCGCTAATTGACCTCAGTGT 60.676 52.381 0.00 0.00 0.00 3.55
577 578 1.009829 GCCGCTAATTGACCTCAGTG 58.990 55.000 0.00 0.00 0.00 3.66
578 579 0.107654 GGCCGCTAATTGACCTCAGT 60.108 55.000 0.00 0.00 0.00 3.41
579 580 1.154205 CGGCCGCTAATTGACCTCAG 61.154 60.000 14.67 0.00 0.00 3.35
580 581 1.153449 CGGCCGCTAATTGACCTCA 60.153 57.895 14.67 0.00 0.00 3.86
581 582 1.887707 CCGGCCGCTAATTGACCTC 60.888 63.158 22.85 0.00 0.00 3.85
582 583 2.189521 CCGGCCGCTAATTGACCT 59.810 61.111 22.85 0.00 0.00 3.85
583 584 3.583086 GCCGGCCGCTAATTGACC 61.583 66.667 22.85 0.00 0.00 4.02
584 585 3.937062 CGCCGGCCGCTAATTGAC 61.937 66.667 22.85 0.46 34.21 3.18
585 586 4.150203 TCGCCGGCCGCTAATTGA 62.150 61.111 22.85 6.57 36.73 2.57
586 587 3.937062 GTCGCCGGCCGCTAATTG 61.937 66.667 22.85 5.95 36.73 2.32
610 611 3.958147 AATGAGTGGTGGCGGCTCG 62.958 63.158 11.43 0.00 32.32 5.03
611 612 2.045926 AATGAGTGGTGGCGGCTC 60.046 61.111 11.43 6.49 0.00 4.70
612 613 2.045926 GAATGAGTGGTGGCGGCT 60.046 61.111 11.43 0.00 0.00 5.52
613 614 3.499737 CGAATGAGTGGTGGCGGC 61.500 66.667 0.00 0.00 0.00 6.53
614 615 2.100631 GTCGAATGAGTGGTGGCGG 61.101 63.158 0.00 0.00 0.00 6.13
615 616 2.444624 CGTCGAATGAGTGGTGGCG 61.445 63.158 0.00 0.00 0.00 5.69
616 617 2.740714 GCGTCGAATGAGTGGTGGC 61.741 63.158 0.00 0.00 0.00 5.01
617 618 1.374125 TGCGTCGAATGAGTGGTGG 60.374 57.895 0.00 0.00 0.00 4.61
618 619 1.781555 GTGCGTCGAATGAGTGGTG 59.218 57.895 0.00 0.00 0.00 4.17
619 620 1.733041 CGTGCGTCGAATGAGTGGT 60.733 57.895 0.00 0.00 42.86 4.16
620 621 2.444624 CCGTGCGTCGAATGAGTGG 61.445 63.158 0.00 0.00 42.86 4.00
621 622 2.444624 CCCGTGCGTCGAATGAGTG 61.445 63.158 0.00 0.00 42.86 3.51
622 623 2.126071 CCCGTGCGTCGAATGAGT 60.126 61.111 0.00 0.00 42.86 3.41
623 624 2.885644 CCCCGTGCGTCGAATGAG 60.886 66.667 0.00 0.00 42.86 2.90
624 625 3.687102 ACCCCGTGCGTCGAATGA 61.687 61.111 0.00 0.00 42.86 2.57
625 626 3.487202 CACCCCGTGCGTCGAATG 61.487 66.667 0.00 0.00 42.86 2.67
626 627 4.752879 CCACCCCGTGCGTCGAAT 62.753 66.667 0.00 0.00 42.86 3.34
644 645 2.590575 AACTTCCACCGTGGCACG 60.591 61.111 31.78 31.78 42.11 5.34
645 646 2.551912 CCAACTTCCACCGTGGCAC 61.552 63.158 13.19 7.79 37.47 5.01
646 647 2.063015 ATCCAACTTCCACCGTGGCA 62.063 55.000 13.19 0.39 37.47 4.92
647 648 1.303317 ATCCAACTTCCACCGTGGC 60.303 57.895 13.19 0.00 37.47 5.01
648 649 1.586154 GCATCCAACTTCCACCGTGG 61.586 60.000 11.73 11.73 39.43 4.94
649 650 0.888736 TGCATCCAACTTCCACCGTG 60.889 55.000 0.00 0.00 0.00 4.94
650 651 0.889186 GTGCATCCAACTTCCACCGT 60.889 55.000 0.00 0.00 0.00 4.83
651 652 1.586154 GGTGCATCCAACTTCCACCG 61.586 60.000 0.00 0.00 36.90 4.94
652 653 1.250840 GGGTGCATCCAACTTCCACC 61.251 60.000 12.38 0.00 43.95 4.61
653 654 1.250840 GGGGTGCATCCAACTTCCAC 61.251 60.000 20.00 0.00 38.11 4.02
654 655 1.076549 GGGGTGCATCCAACTTCCA 59.923 57.895 20.00 0.00 38.11 3.53
655 656 1.682344 GGGGGTGCATCCAACTTCC 60.682 63.158 20.00 5.27 38.11 3.46
656 657 2.046285 CGGGGGTGCATCCAACTTC 61.046 63.158 20.00 0.00 38.11 3.01
657 658 2.035626 CGGGGGTGCATCCAACTT 59.964 61.111 20.00 0.00 38.11 2.66
658 659 4.740822 GCGGGGGTGCATCCAACT 62.741 66.667 20.00 0.00 38.11 3.16
674 675 2.058595 TTAGAGCGGACCAGGAGGC 61.059 63.158 0.00 0.00 39.06 4.70
675 676 0.684805 AGTTAGAGCGGACCAGGAGG 60.685 60.000 0.00 0.00 42.21 4.30
676 677 0.457851 CAGTTAGAGCGGACCAGGAG 59.542 60.000 0.00 0.00 0.00 3.69
677 678 0.251653 ACAGTTAGAGCGGACCAGGA 60.252 55.000 0.00 0.00 0.00 3.86
678 679 0.608640 AACAGTTAGAGCGGACCAGG 59.391 55.000 0.00 0.00 0.00 4.45
679 680 1.000955 ACAACAGTTAGAGCGGACCAG 59.999 52.381 0.00 0.00 0.00 4.00
680 681 1.000506 GACAACAGTTAGAGCGGACCA 59.999 52.381 0.00 0.00 0.00 4.02
681 682 1.672145 GGACAACAGTTAGAGCGGACC 60.672 57.143 0.00 0.00 0.00 4.46
682 683 1.272769 AGGACAACAGTTAGAGCGGAC 59.727 52.381 0.00 0.00 0.00 4.79
683 684 1.629043 AGGACAACAGTTAGAGCGGA 58.371 50.000 0.00 0.00 0.00 5.54
684 685 2.159226 CCTAGGACAACAGTTAGAGCGG 60.159 54.545 1.05 0.00 0.00 5.52
685 686 2.735762 GCCTAGGACAACAGTTAGAGCG 60.736 54.545 14.75 0.00 0.00 5.03
686 687 2.735762 CGCCTAGGACAACAGTTAGAGC 60.736 54.545 14.75 0.00 0.00 4.09
687 688 2.159226 CCGCCTAGGACAACAGTTAGAG 60.159 54.545 14.75 0.00 45.00 2.43
688 689 1.822990 CCGCCTAGGACAACAGTTAGA 59.177 52.381 14.75 0.00 45.00 2.10
689 690 1.739371 GCCGCCTAGGACAACAGTTAG 60.739 57.143 14.75 0.00 45.00 2.34
690 691 0.248289 GCCGCCTAGGACAACAGTTA 59.752 55.000 14.75 0.00 45.00 2.24
691 692 1.003718 GCCGCCTAGGACAACAGTT 60.004 57.895 14.75 0.00 45.00 3.16
692 693 2.663196 GCCGCCTAGGACAACAGT 59.337 61.111 14.75 0.00 45.00 3.55
700 701 4.832608 GTCGTTGGGCCGCCTAGG 62.833 72.222 9.86 3.67 44.97 3.02
706 707 3.695022 CTAGACCGTCGTTGGGCCG 62.695 68.421 0.00 0.00 38.01 6.13
707 708 2.183555 CTAGACCGTCGTTGGGCC 59.816 66.667 0.00 0.00 38.01 5.80
708 709 2.183555 CCTAGACCGTCGTTGGGC 59.816 66.667 0.00 0.00 37.26 5.36
709 710 2.890371 CCCTAGACCGTCGTTGGG 59.110 66.667 10.63 10.63 0.00 4.12
710 711 2.183555 GCCCTAGACCGTCGTTGG 59.816 66.667 0.00 0.00 0.00 3.77
711 712 2.183555 GGCCCTAGACCGTCGTTG 59.816 66.667 0.00 0.00 0.00 4.10
712 713 2.283388 TGGCCCTAGACCGTCGTT 60.283 61.111 0.00 0.00 0.00 3.85
713 714 2.754658 CTGGCCCTAGACCGTCGT 60.755 66.667 0.00 0.00 0.00 4.34
714 715 3.528370 CCTGGCCCTAGACCGTCG 61.528 72.222 0.00 0.00 0.00 5.12
715 716 3.851128 GCCTGGCCCTAGACCGTC 61.851 72.222 7.66 0.00 0.00 4.79
716 717 4.400251 AGCCTGGCCCTAGACCGT 62.400 66.667 16.57 0.00 0.00 4.83
717 718 3.541713 GAGCCTGGCCCTAGACCG 61.542 72.222 16.57 0.00 0.00 4.79
718 719 3.164977 GGAGCCTGGCCCTAGACC 61.165 72.222 16.57 6.01 0.00 3.85
719 720 3.164977 GGGAGCCTGGCCCTAGAC 61.165 72.222 16.57 0.07 42.56 2.59
720 721 3.694697 TGGGAGCCTGGCCCTAGA 61.695 66.667 16.57 2.54 46.19 2.43
721 722 3.483869 GTGGGAGCCTGGCCCTAG 61.484 72.222 16.57 0.00 46.19 3.02
731 732 0.539986 TTAGATCCAACGGTGGGAGC 59.460 55.000 21.90 11.95 46.01 4.70
740 741 8.538409 AAAGCAATTGAAACATTAGATCCAAC 57.462 30.769 10.34 0.00 0.00 3.77
749 751 6.536447 AGAATGGGAAAGCAATTGAAACATT 58.464 32.000 10.34 9.73 0.00 2.71
768 770 4.508461 TGCATTCAGGTGTCAAAGAATG 57.492 40.909 14.30 14.30 46.16 2.67
772 774 7.894376 ATTTTATTGCATTCAGGTGTCAAAG 57.106 32.000 0.00 0.00 0.00 2.77
823 825 9.829507 AAACTTGGTGATGTGAAAATGATTAAA 57.170 25.926 0.00 0.00 0.00 1.52
824 826 9.829507 AAAACTTGGTGATGTGAAAATGATTAA 57.170 25.926 0.00 0.00 0.00 1.40
835 837 4.215399 ACGGATGTAAAACTTGGTGATGTG 59.785 41.667 0.00 0.00 0.00 3.21
846 848 3.181500 GCATCTCCCAACGGATGTAAAAC 60.181 47.826 0.00 0.00 40.76 2.43
886 888 1.982226 CCGGGAGATCTAGAGGAGAGA 59.018 57.143 0.00 0.00 37.70 3.10
1126 1182 0.035343 GGGAGGATTATTAGGGGCGC 60.035 60.000 0.00 0.00 0.00 6.53
1150 1206 1.623542 AAAATCGACGAGGGAGGGGG 61.624 60.000 3.01 0.00 0.00 5.40
1218 1287 1.472376 CCCCGATCTGCTCACTCTTTC 60.472 57.143 0.00 0.00 0.00 2.62
1307 1376 3.954258 CCTAAAAATGCAGAACCCTAGGG 59.046 47.826 27.36 27.36 42.03 3.53
1387 1513 7.360101 CGAAACCTGTTAACTATTCCAAGACAG 60.360 40.741 7.22 0.00 34.38 3.51
1412 1540 8.470040 TCCTTAATTTTAGCTTACTGTACACG 57.530 34.615 0.00 0.00 0.00 4.49
1413 1541 8.880750 CCTCCTTAATTTTAGCTTACTGTACAC 58.119 37.037 0.00 0.00 0.00 2.90
1448 1576 9.988815 AAAGAGTGATCTACAATCCATACATAC 57.011 33.333 0.00 0.00 43.50 2.39
1449 1577 9.987272 CAAAGAGTGATCTACAATCCATACATA 57.013 33.333 0.00 0.00 43.50 2.29
1450 1578 7.935755 CCAAAGAGTGATCTACAATCCATACAT 59.064 37.037 0.00 0.00 43.50 2.29
1484 1612 8.842358 TTAGTATAAATAATTGGGAAGAGGCG 57.158 34.615 0.00 0.00 0.00 5.52
1529 1660 6.698008 ATTCGCCAATTTGACATATTCAGA 57.302 33.333 0.00 0.00 34.94 3.27
1547 1678 4.731961 CAGATGTTGTTGATAGCAATTCGC 59.268 41.667 0.00 0.00 42.91 4.70
1548 1679 5.872635 ACAGATGTTGTTGATAGCAATTCG 58.127 37.500 0.00 0.00 36.31 3.34
1561 1692 6.947464 AGTACCTAATGCTAACAGATGTTGT 58.053 36.000 8.46 0.00 43.45 3.32
1574 1705 6.824305 ATCATGGCAAATAGTACCTAATGC 57.176 37.500 0.00 3.46 34.39 3.56
1582 1713 6.377996 GCATCCCAATATCATGGCAAATAGTA 59.622 38.462 0.00 0.00 39.26 1.82
1583 1714 5.186409 GCATCCCAATATCATGGCAAATAGT 59.814 40.000 0.00 0.00 39.26 2.12
1584 1715 5.421056 AGCATCCCAATATCATGGCAAATAG 59.579 40.000 0.00 0.00 39.26 1.73
1612 1743 7.620880 AGTGTTAATAGAACTACAGCCATTCA 58.379 34.615 0.00 0.00 0.00 2.57
1617 1748 7.321153 TCAAGAGTGTTAATAGAACTACAGCC 58.679 38.462 0.00 0.00 0.00 4.85
1720 1867 5.576447 AAACATTATTAAACTCCGGCCAG 57.424 39.130 2.24 0.00 0.00 4.85
1795 1942 5.839621 TGGCCGACTATCTGTAAAGATAAC 58.160 41.667 4.17 1.51 31.24 1.89
1830 1977 5.666969 TTACATCGTGTGAAACCTCAAAG 57.333 39.130 1.58 0.00 34.36 2.77
1863 2010 5.863935 TCAATCACGACACAAGATAACTGAG 59.136 40.000 0.00 0.00 0.00 3.35
1953 2612 4.277476 TGAAGGGTCTTCTGAAAGCAAAA 58.723 39.130 8.80 0.00 32.18 2.44
2037 2696 9.709495 ATGATGTGTTTATTGTGCAATTTACTT 57.291 25.926 2.56 0.00 32.50 2.24
2103 2762 4.989875 AGCAAGCCAGATCCAATACTAT 57.010 40.909 0.00 0.00 0.00 2.12
2169 2835 3.674955 CGAACCACATCAGATACGACCAA 60.675 47.826 0.00 0.00 0.00 3.67
2262 2928 4.836825 TCATGGACAAGGTTGAGAGATTC 58.163 43.478 0.00 0.00 0.00 2.52
2270 2936 1.475280 CATGGCTCATGGACAAGGTTG 59.525 52.381 7.15 0.00 38.11 3.77
2282 2948 1.948834 CAACAGTGTTGACATGGCTCA 59.051 47.619 28.44 0.00 0.00 4.26
2392 3063 3.758755 TCTGCCATAGTGCCATCTAAG 57.241 47.619 0.00 0.00 0.00 2.18
2694 3461 7.874016 AGATGTGCAATCAAAATGTTAACACAT 59.126 29.630 11.22 5.10 46.34 3.21
2702 3469 4.768448 TCAGGAGATGTGCAATCAAAATGT 59.232 37.500 10.26 0.00 0.00 2.71
2755 3524 9.809096 GTGATCAAAGAAGATAGAGTCAATGTA 57.191 33.333 0.00 0.00 0.00 2.29
2789 3592 8.192774 GGAATACAAATTCATGAGCTTGATCAA 58.807 33.333 19.98 8.12 42.88 2.57
2870 3674 6.485984 ACAGAAAGCTAATATGCAGATGAAGG 59.514 38.462 0.00 0.00 34.99 3.46
2965 3777 5.395682 AATTAGATGCAGTGCACAACATT 57.604 34.783 22.44 13.56 43.04 2.71
2994 3814 6.811253 ACGTATGTCAACATAAAACATGGT 57.189 33.333 4.48 0.00 40.18 3.55
3097 3917 1.064060 GTTCATAAGTGTGCGATGCCC 59.936 52.381 0.00 0.00 0.00 5.36
3239 4059 1.876156 CTCACTGGAAAACTGAGCACC 59.124 52.381 0.00 0.00 0.00 5.01
3273 4093 9.846248 AATCAAGTATGTTGATTTAGCAAAGAC 57.154 29.630 10.56 0.00 44.16 3.01
3305 4125 4.621034 CCAACTTGAACGTTATTTGCATCC 59.379 41.667 0.00 0.00 0.00 3.51
3481 4301 2.095853 ACAATTAAACATCGCGAGGCTG 59.904 45.455 22.18 13.91 0.00 4.85
3539 4368 6.513393 GCACCCCGATAAAGATCAATAACAAG 60.513 42.308 0.00 0.00 31.78 3.16
3587 4416 5.971895 TTACGGCTCCAATAACGAAATAC 57.028 39.130 0.00 0.00 0.00 1.89
3606 4435 7.042389 GCTTACAGTCCAGAGAGCATAATTTAC 60.042 40.741 0.00 0.00 0.00 2.01
3635 4467 4.342862 ACATGGTATCTGTCTGGTATGC 57.657 45.455 0.00 0.00 0.00 3.14
3679 4522 5.615984 GCTCAAACCGTGTTCGAAATTATCA 60.616 40.000 0.00 0.00 39.71 2.15
3692 4535 0.179215 GCTCGATTGCTCAAACCGTG 60.179 55.000 0.00 6.58 0.00 4.94
3695 4539 2.982470 CAAAAGCTCGATTGCTCAAACC 59.018 45.455 0.00 0.00 43.24 3.27
3944 7288 3.862267 TGCGAAACAAAGTTTGGAACATG 59.138 39.130 19.45 5.68 39.30 3.21
4239 7801 7.595819 AAATTGAACAGGGATAGTCAACAAA 57.404 32.000 0.00 0.00 0.00 2.83
4325 7887 1.065273 GGCAGCTGATTCCGCAATG 59.935 57.895 20.43 0.00 0.00 2.82
4433 7995 1.000843 TGTTCCTCGTCATGGTGAGTG 59.999 52.381 12.25 6.06 0.00 3.51
4434 7996 1.000955 GTGTTCCTCGTCATGGTGAGT 59.999 52.381 12.25 0.00 0.00 3.41
4442 8004 0.963225 TGGAATCGTGTTCCTCGTCA 59.037 50.000 18.44 1.30 39.31 4.35
4599 8165 2.422597 CCAAACTCACCGCACAGATAA 58.577 47.619 0.00 0.00 0.00 1.75
4609 8175 2.583143 AGGTAAACTGCCAAACTCACC 58.417 47.619 0.00 0.00 0.00 4.02
4628 8194 7.062255 GCTCGACCCAAAATTATTGAAAGAAAG 59.938 37.037 0.00 0.00 0.00 2.62
4632 8198 5.708948 TGCTCGACCCAAAATTATTGAAAG 58.291 37.500 0.00 0.00 0.00 2.62
4659 8225 5.724328 TGAACTACATGGTCAGCTTTAGAG 58.276 41.667 0.00 0.00 37.49 2.43
4762 8328 4.760530 TCAGCCAGAGTAAACTATGCAT 57.239 40.909 3.79 3.79 34.08 3.96
4907 8474 7.730332 AGAGGGACTAACAAATCCAGAAATTTT 59.270 33.333 0.00 0.00 41.55 1.82
4915 8482 4.993705 ACAAGAGGGACTAACAAATCCA 57.006 40.909 0.00 0.00 41.55 3.41
4944 8511 5.828299 ACGATCCAAGTTTCACTCAAAAA 57.172 34.783 0.00 0.00 0.00 1.94
4945 8512 6.928979 TTACGATCCAAGTTTCACTCAAAA 57.071 33.333 0.00 0.00 0.00 2.44
4946 8513 6.928979 TTTACGATCCAAGTTTCACTCAAA 57.071 33.333 0.00 0.00 0.00 2.69
4947 8514 7.504924 AATTTACGATCCAAGTTTCACTCAA 57.495 32.000 0.00 0.00 0.00 3.02
4948 8515 7.227711 TCAAATTTACGATCCAAGTTTCACTCA 59.772 33.333 0.00 0.00 0.00 3.41
4949 8516 7.534239 GTCAAATTTACGATCCAAGTTTCACTC 59.466 37.037 0.00 0.00 0.00 3.51
4950 8517 7.012894 TGTCAAATTTACGATCCAAGTTTCACT 59.987 33.333 0.00 0.00 0.00 3.41
5061 8637 9.273016 CCTCTTGTATTTTCAGTTCAACTTAGA 57.727 33.333 0.00 0.00 0.00 2.10
5062 8638 8.507249 CCCTCTTGTATTTTCAGTTCAACTTAG 58.493 37.037 0.00 0.00 0.00 2.18
5069 8646 4.336280 AGCCCCTCTTGTATTTTCAGTTC 58.664 43.478 0.00 0.00 0.00 3.01
5100 8677 4.478206 TTGCTTCTACTCTCTCCATTGG 57.522 45.455 0.00 0.00 0.00 3.16
5101 8678 5.220815 GCAATTGCTTCTACTCTCTCCATTG 60.221 44.000 23.21 0.00 38.21 2.82
5102 8679 4.880696 GCAATTGCTTCTACTCTCTCCATT 59.119 41.667 23.21 0.00 38.21 3.16
5104 8681 3.261643 TGCAATTGCTTCTACTCTCTCCA 59.738 43.478 29.37 2.61 42.66 3.86
5119 8696 9.053840 AGACTGAACTCAATATAGATGCAATTG 57.946 33.333 0.00 0.00 32.96 2.32
5128 8705 6.375377 GTCGCCTAGACTGAACTCAATATAG 58.625 44.000 0.00 0.00 46.13 1.31
5164 8741 6.526566 AATATTACTGAAAATCGAGCGACC 57.473 37.500 0.00 0.00 0.00 4.79
5185 8762 7.867305 AAAAACCGGTAAACCAAATGAAAAT 57.133 28.000 8.00 0.00 35.14 1.82
5191 8768 5.537295 AGCTCTAAAAACCGGTAAACCAAAT 59.463 36.000 8.00 0.00 35.14 2.32
5211 8788 5.960105 GCAGTGTTCGATGTATTTTAAGCTC 59.040 40.000 0.00 0.00 0.00 4.09
5223 8800 2.938451 ACATGTATGGCAGTGTTCGATG 59.062 45.455 0.00 0.00 0.00 3.84
5224 8801 3.266510 ACATGTATGGCAGTGTTCGAT 57.733 42.857 0.00 0.00 0.00 3.59
5226 8803 3.063452 GGTAACATGTATGGCAGTGTTCG 59.937 47.826 0.00 0.00 36.34 3.95
5243 8820 7.215085 AGATGTAGGAACATATTTCCGGTAAC 58.785 38.462 0.00 8.17 46.49 2.50
5253 8830 3.259374 CCGCCTGAGATGTAGGAACATAT 59.741 47.826 0.00 0.00 46.49 1.78
5257 8834 0.824759 ACCGCCTGAGATGTAGGAAC 59.175 55.000 0.00 0.00 37.52 3.62
5269 8846 1.540267 TTCAATAAACCCACCGCCTG 58.460 50.000 0.00 0.00 0.00 4.85
5304 8881 4.182339 GACGAAGAATTCCACTTCTACCC 58.818 47.826 0.65 0.00 43.81 3.69
5311 8888 0.249398 CCCGGACGAAGAATTCCACT 59.751 55.000 0.73 0.00 43.81 4.00
5364 8948 9.449719 AGAACTACTTTCAAATACGAATCCAAT 57.550 29.630 0.00 0.00 36.57 3.16
5467 9051 4.925836 TCTGTTTGGGTTTATAAGTCCCC 58.074 43.478 18.87 14.24 40.41 4.81
5471 9055 6.293698 ACGTTCTCTGTTTGGGTTTATAAGT 58.706 36.000 0.00 0.00 0.00 2.24
5493 9077 8.120465 GGAATCACAATTACCTACAAATGTACG 58.880 37.037 0.00 0.00 0.00 3.67



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.