Multiple sequence alignment - TraesCS7B01G005000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G005000 chr7B 100.000 4790 0 0 1542 6331 2790721 2785932 0.000000e+00 8846.0
1 TraesCS7B01G005000 chr7B 100.000 1209 0 0 1 1209 2792262 2791054 0.000000e+00 2233.0
2 TraesCS7B01G005000 chr7B 80.328 122 20 2 2053 2174 585490572 585490689 8.740000e-14 89.8
3 TraesCS7B01G005000 chr7B 100.000 28 0 0 4802 4829 2787434 2787461 1.100000e-02 52.8
4 TraesCS7B01G005000 chr7A 90.676 2499 164 36 3105 5581 64613678 64611227 0.000000e+00 3260.0
5 TraesCS7B01G005000 chr7A 90.835 1604 91 18 1545 3115 64615286 64613706 0.000000e+00 2097.0
6 TraesCS7B01G005000 chr7A 90.685 730 48 12 7 735 64616565 64615855 0.000000e+00 953.0
7 TraesCS7B01G005000 chr7A 95.833 360 10 3 854 1209 64615695 64615337 1.530000e-160 577.0
8 TraesCS7B01G005000 chr7A 88.372 301 19 2 5974 6274 64610451 64610167 1.310000e-91 348.0
9 TraesCS7B01G005000 chr7A 92.143 140 11 0 6192 6331 64610105 64609966 1.390000e-46 198.0
10 TraesCS7B01G005000 chr7D 92.190 1575 99 12 3105 4670 60286406 60284847 0.000000e+00 2206.0
11 TraesCS7B01G005000 chr7D 88.447 1610 92 35 1542 3115 60287985 60286434 0.000000e+00 1857.0
12 TraesCS7B01G005000 chr7D 93.786 869 46 7 4653 5517 60284835 60283971 0.000000e+00 1299.0
13 TraesCS7B01G005000 chr7D 92.027 740 43 12 1 731 60289378 60288646 0.000000e+00 1026.0
14 TraesCS7B01G005000 chr7D 94.809 366 11 5 852 1209 60288401 60288036 1.190000e-156 564.0
15 TraesCS7B01G005000 chr7D 90.236 297 27 2 5978 6274 60281087 60280793 2.770000e-103 387.0
16 TraesCS7B01G005000 chr7D 89.683 126 13 0 6206 6331 60280699 60280574 1.830000e-35 161.0
17 TraesCS7B01G005000 chr7D 91.579 95 7 1 5758 5852 60282655 60282562 5.150000e-26 130.0
18 TraesCS7B01G005000 chr7D 91.667 72 5 1 5510 5581 60282726 60282656 1.450000e-16 99.0
19 TraesCS7B01G005000 chr1B 93.889 180 11 0 5582 5761 619195131 619195310 8.090000e-69 272.0
20 TraesCS7B01G005000 chr1B 93.333 180 12 0 5582 5761 461440321 461440142 3.760000e-67 267.0
21 TraesCS7B01G005000 chr6D 93.333 180 12 0 5582 5761 108485408 108485229 3.760000e-67 267.0
22 TraesCS7B01G005000 chr6D 93.333 180 12 0 5582 5761 458941153 458941332 3.760000e-67 267.0
23 TraesCS7B01G005000 chr6D 91.071 56 5 0 2119 2174 299890652 299890597 6.810000e-10 76.8
24 TraesCS7B01G005000 chr6A 93.333 180 12 0 5582 5761 597252793 597252972 3.760000e-67 267.0
25 TraesCS7B01G005000 chr4D 93.333 180 12 0 5582 5761 123448786 123448965 3.760000e-67 267.0
26 TraesCS7B01G005000 chr4B 89.952 209 18 3 5556 5761 495479483 495479691 3.760000e-67 267.0
27 TraesCS7B01G005000 chr1D 93.333 180 12 0 5582 5761 351029126 351028947 3.760000e-67 267.0
28 TraesCS7B01G005000 chr1A 93.333 180 12 0 5582 5761 278521394 278521215 3.760000e-67 267.0
29 TraesCS7B01G005000 chr5D 92.857 70 5 0 665 734 443360417 443360348 1.120000e-17 102.0
30 TraesCS7B01G005000 chr5B 91.781 73 6 0 662 734 50346820 50346892 1.120000e-17 102.0
31 TraesCS7B01G005000 chr6B 93.478 46 3 0 2129 2174 464910427 464910382 1.140000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G005000 chr7B 2785932 2792262 6330 True 5539.500000 8846 100.000000 1 6331 2 chr7B.!!$R1 6330
1 TraesCS7B01G005000 chr7A 64609966 64616565 6599 True 1238.833333 3260 91.424000 7 6331 6 chr7A.!!$R1 6324
2 TraesCS7B01G005000 chr7D 60280574 60289378 8804 True 858.777778 2206 91.602667 1 6331 9 chr7D.!!$R1 6330

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
646 656 0.378962 TGTCGCACCGTTTTCTTTGG 59.621 50.000 0.00 0.00 0.00 3.28 F
671 681 1.626825 AGAAAGTTAGCCTGCGGGTTA 59.373 47.619 14.55 9.09 34.28 2.85 F
1579 1740 0.109412 AGTCGAACTAAACCCTCGCG 60.109 55.000 0.00 0.00 32.66 5.87 F
2096 2265 0.179045 GACCTATGGCGAGCACCAAT 60.179 55.000 0.00 0.00 44.65 3.16 F
2097 2266 0.464373 ACCTATGGCGAGCACCAATG 60.464 55.000 0.00 0.00 44.65 2.82 F
3026 3224 0.684535 TAGCAAGCCACTGTAGTGCA 59.315 50.000 6.50 0.00 44.34 4.57 F
4265 4509 0.248458 CCGTGCAGTGTTCGCTTTTT 60.248 50.000 0.00 0.00 0.00 1.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1561 1722 0.387750 ACGCGAGGGTTTAGTTCGAC 60.388 55.0 15.93 0.00 36.49 4.20 R
2162 2332 0.613260 AAGGCATCGACACTTAGGCA 59.387 50.0 0.00 0.00 0.00 4.75 R
3492 3736 0.399075 AACCTTTGGTCCGTGGGTAG 59.601 55.0 0.77 0.00 33.12 3.18 R
3809 4053 0.670162 ACATGCACAACTGGTTGCTC 59.330 50.0 12.65 6.11 44.03 4.26 R
4076 4320 0.947660 AGCATGTGCACTGTCTCACG 60.948 55.0 19.41 0.00 45.16 4.35 R
4617 4861 0.243907 AGACAGATCAACCGTCCACG 59.756 55.0 0.00 0.00 39.44 4.94 R
5856 7413 0.035317 GTGAGTGATGTGACCAGCCA 59.965 55.0 0.00 0.00 0.00 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 117 8.239998 GGATCTCTGTTTCAAAGGAGTATTTTG 58.760 37.037 0.00 0.00 36.98 2.44
298 301 2.610859 CCCTGGGCACAGTAGGGT 60.611 66.667 16.38 0.00 45.00 4.34
308 311 3.319198 AGTAGGGTGCGTGTGGGG 61.319 66.667 0.00 0.00 0.00 4.96
335 344 1.006813 TGCCCCTCTCTCTCTCTCTT 58.993 55.000 0.00 0.00 0.00 2.85
352 361 9.527157 TCTCTCTCTTTCTCTCTCAATTTTCTA 57.473 33.333 0.00 0.00 0.00 2.10
434 443 5.571784 AGGATGCAGTTGTTCAATACATG 57.428 39.130 0.00 0.00 36.44 3.21
445 454 7.882791 AGTTGTTCAATACATGTATCCAGTTGA 59.117 33.333 18.52 15.17 36.44 3.18
527 536 8.329346 TCTTTTGAGGATAGATTTCAGAGGAT 57.671 34.615 0.00 0.00 0.00 3.24
600 609 6.391227 TCTTTCAAGAATTTTGGTCCTGTC 57.609 37.500 0.00 0.00 30.73 3.51
614 623 4.706476 TGGTCCTGTCCATTCATTTCATTC 59.294 41.667 0.00 0.00 31.96 2.67
646 656 0.378962 TGTCGCACCGTTTTCTTTGG 59.621 50.000 0.00 0.00 0.00 3.28
663 673 3.895704 TTGGGGAAAGAAAGTTAGCCT 57.104 42.857 0.00 0.00 0.00 4.58
671 681 1.626825 AGAAAGTTAGCCTGCGGGTTA 59.373 47.619 14.55 9.09 34.28 2.85
677 687 4.476410 GCCTGCGGGTTAAAGCGC 62.476 66.667 14.55 0.00 35.87 5.92
703 713 4.765339 TCTGACTCTCTAACGGTGATCAAA 59.235 41.667 0.00 0.00 0.00 2.69
706 716 4.184629 ACTCTCTAACGGTGATCAAATGC 58.815 43.478 0.00 0.00 0.00 3.56
742 862 1.635487 ACTTGGTGGGACATGTGCTAT 59.365 47.619 17.44 0.00 44.52 2.97
751 871 6.346096 GTGGGACATGTGCTATCTAGTTTTA 58.654 40.000 17.44 0.00 44.52 1.52
755 875 7.553044 GGGACATGTGCTATCTAGTTTTAGTTT 59.447 37.037 17.44 0.00 0.00 2.66
757 877 9.760660 GACATGTGCTATCTAGTTTTAGTTTTG 57.239 33.333 1.15 0.00 0.00 2.44
759 879 8.730680 CATGTGCTATCTAGTTTTAGTTTTGGT 58.269 33.333 0.00 0.00 0.00 3.67
761 881 9.781633 TGTGCTATCTAGTTTTAGTTTTGGTAA 57.218 29.630 0.00 0.00 0.00 2.85
793 913 3.952931 TCTAGTTAGACTGACGAGCCTT 58.047 45.455 3.04 0.00 0.00 4.35
804 924 4.021016 ACTGACGAGCCTTTAGATTGTCTT 60.021 41.667 0.00 0.00 0.00 3.01
805 925 5.185249 ACTGACGAGCCTTTAGATTGTCTTA 59.815 40.000 0.00 0.00 0.00 2.10
817 937 7.525688 TTAGATTGTCTTATGAGCAAACTCG 57.474 36.000 7.36 0.00 46.69 4.18
820 951 6.754209 AGATTGTCTTATGAGCAAACTCGTAG 59.246 38.462 0.00 0.00 46.69 3.51
821 952 5.638596 TGTCTTATGAGCAAACTCGTAGA 57.361 39.130 0.00 0.00 46.69 2.59
883 1033 2.363038 GCTGAAAAACCGGGGTTAAACT 59.637 45.455 6.32 0.00 37.35 2.66
922 1073 1.739196 GTCTAAACCGGTCCGTGGC 60.739 63.158 8.04 0.00 0.00 5.01
1564 1725 4.020617 TGCCCTGCCCTTCAGTCG 62.021 66.667 0.00 0.00 41.25 4.18
1565 1726 3.706373 GCCCTGCCCTTCAGTCGA 61.706 66.667 0.00 0.00 41.25 4.20
1579 1740 0.109412 AGTCGAACTAAACCCTCGCG 60.109 55.000 0.00 0.00 32.66 5.87
1580 1741 0.387750 GTCGAACTAAACCCTCGCGT 60.388 55.000 5.77 0.00 32.66 6.01
1599 1760 3.527427 GCGTAGGCATTTGGGGGC 61.527 66.667 1.75 0.00 39.62 5.80
1633 1794 2.254350 GCCGTTTCGTCTTTGCCC 59.746 61.111 0.00 0.00 0.00 5.36
1642 1803 2.093106 TCGTCTTTGCCCTCTAGACTC 58.907 52.381 0.00 0.00 36.90 3.36
1654 1815 4.202274 CCCTCTAGACTCGACTCTGTATGA 60.202 50.000 4.99 0.00 0.00 2.15
1684 1847 9.036671 GTGTAGACTAATCCAATTTTCTCTAGC 57.963 37.037 0.00 0.00 0.00 3.42
1691 1854 1.009829 AATTTTCTCTAGCAGGCGCG 58.990 50.000 0.00 0.00 45.49 6.86
1710 1873 2.864968 CGGTAGCGGCAAGATAGATAC 58.135 52.381 6.39 0.00 0.00 2.24
1823 1990 0.311790 AGGCTGTTGCATTTGTGTCG 59.688 50.000 0.00 0.00 41.91 4.35
1841 2008 0.670546 CGTTCTTCACCCATCACGCT 60.671 55.000 0.00 0.00 0.00 5.07
1845 2012 2.809861 CTTCACCCATCACGCTGCCT 62.810 60.000 0.00 0.00 0.00 4.75
1904 2073 2.872858 GAGTCAAGTTCCTTCTGCGTTT 59.127 45.455 0.00 0.00 0.00 3.60
1954 2123 6.283694 TCTCTGTGCTAATGTGGATATGAAC 58.716 40.000 0.00 0.00 0.00 3.18
1956 2125 7.287696 TCTCTGTGCTAATGTGGATATGAACTA 59.712 37.037 0.00 0.00 0.00 2.24
1957 2126 7.436933 TCTGTGCTAATGTGGATATGAACTAG 58.563 38.462 0.00 0.00 0.00 2.57
1959 2128 6.326323 TGTGCTAATGTGGATATGAACTAGGA 59.674 38.462 0.00 0.00 0.00 2.94
1960 2129 7.147567 TGTGCTAATGTGGATATGAACTAGGAA 60.148 37.037 0.00 0.00 0.00 3.36
1963 2132 9.289782 GCTAATGTGGATATGAACTAGGAAAAT 57.710 33.333 0.00 0.00 0.00 1.82
1985 2154 7.506328 AATTCGTTATACTTAATTCCCTGCC 57.494 36.000 0.00 0.00 0.00 4.85
1992 2161 9.350951 GTTATACTTAATTCCCTGCCAAGTATT 57.649 33.333 11.03 0.00 40.82 1.89
2014 2183 3.197790 CGTTGCCGGCATCCTCAG 61.198 66.667 33.25 12.79 0.00 3.35
2022 2191 1.407299 CCGGCATCCTCAGTTCAATCA 60.407 52.381 0.00 0.00 0.00 2.57
2031 2200 8.288208 GCATCCTCAGTTCAATCATTGTATTAG 58.712 37.037 0.00 0.00 0.00 1.73
2051 2220 2.818432 AGAAATTCAGCAGCAGGTCTTG 59.182 45.455 0.00 0.00 0.00 3.02
2083 2252 7.567622 TGTTTATAAGGCTGTAAGGAGACCTAT 59.432 37.037 0.00 0.00 31.13 2.57
2096 2265 0.179045 GACCTATGGCGAGCACCAAT 60.179 55.000 0.00 0.00 44.65 3.16
2097 2266 0.464373 ACCTATGGCGAGCACCAATG 60.464 55.000 0.00 0.00 44.65 2.82
2114 2283 3.541713 GGCCCTGACGCCTAGGAG 61.542 72.222 14.75 12.99 46.10 3.69
2117 2286 2.042843 CCTGACGCCTAGGAGGGT 60.043 66.667 14.75 6.61 37.52 4.34
2118 2287 2.427245 CCTGACGCCTAGGAGGGTG 61.427 68.421 14.75 3.45 42.11 4.61
2119 2288 3.075005 TGACGCCTAGGAGGGTGC 61.075 66.667 14.75 1.43 40.24 5.01
2122 2291 2.831742 CGCCTAGGAGGGTGCGTA 60.832 66.667 14.75 0.00 41.95 4.42
2123 2292 2.420568 CGCCTAGGAGGGTGCGTAA 61.421 63.158 14.75 0.00 41.95 3.18
2124 2293 1.442148 GCCTAGGAGGGTGCGTAAG 59.558 63.158 14.75 0.00 35.37 2.34
2144 2314 2.024464 AGGTGGGCATAATTGTAAGGCA 60.024 45.455 0.00 0.00 0.00 4.75
2170 2340 2.747855 GCGCCTTGCTGCCTAAGT 60.748 61.111 0.00 0.00 41.73 2.24
2174 2344 1.639298 GCCTTGCTGCCTAAGTGTCG 61.639 60.000 0.00 0.00 0.00 4.35
2176 2346 1.406069 CCTTGCTGCCTAAGTGTCGAT 60.406 52.381 0.00 0.00 0.00 3.59
2187 2357 5.050295 GCCTAAGTGTCGATGCCTTATAAAC 60.050 44.000 0.00 0.00 0.00 2.01
2276 2462 3.380004 TCTGTTGTGTAAAAGGTGCTTGG 59.620 43.478 0.00 0.00 0.00 3.61
2282 2468 2.124122 GTAAAAGGTGCTTGGTTTGCG 58.876 47.619 0.00 0.00 0.00 4.85
2285 2471 1.034838 AAGGTGCTTGGTTTGCGTCA 61.035 50.000 0.00 0.00 0.00 4.35
2286 2472 1.008538 GGTGCTTGGTTTGCGTCAG 60.009 57.895 0.00 0.00 0.00 3.51
2336 2522 3.679980 GTGCCACTTCACAGTAGTACATG 59.320 47.826 2.52 0.72 36.97 3.21
2355 2541 5.717119 ACATGAAGCCAATGAGAATTGTTC 58.283 37.500 0.00 0.00 0.00 3.18
2356 2542 4.789012 TGAAGCCAATGAGAATTGTTCC 57.211 40.909 0.00 0.00 0.00 3.62
2413 2600 5.890985 TCAAAACTCAAAGACTGGATTTCCA 59.109 36.000 0.00 0.00 45.30 3.53
2420 2607 9.178758 ACTCAAAGACTGGATTTCCATAAATAC 57.821 33.333 0.00 0.00 46.46 1.89
2489 2676 3.326588 TGAGTAGGCCAAAAGCTCTACAA 59.673 43.478 5.01 0.00 42.79 2.41
2540 2727 5.049612 TCGATGTATGCGGTAGTAGAAAGAG 60.050 44.000 0.00 0.00 0.00 2.85
2574 2771 4.574674 ATCTTGTGTTCTGGCCTCATAA 57.425 40.909 3.32 2.39 0.00 1.90
2587 2784 6.014242 TCTGGCCTCATAACTGTATCAATAGG 60.014 42.308 3.32 0.00 0.00 2.57
2736 2933 4.131596 TGGAGGTACTTTTTGTGCACTAC 58.868 43.478 19.41 10.54 41.55 2.73
2737 2934 4.141574 TGGAGGTACTTTTTGTGCACTACT 60.142 41.667 19.41 1.56 41.55 2.57
2738 2935 5.070714 TGGAGGTACTTTTTGTGCACTACTA 59.929 40.000 19.41 0.00 41.55 1.82
2745 2942 7.687941 ACTTTTTGTGCACTACTATTGCTAT 57.312 32.000 19.41 0.00 40.86 2.97
2857 3055 5.958380 TGGTGAGGTCTACAGAGTAATTGAT 59.042 40.000 0.00 0.00 0.00 2.57
2952 3150 6.379133 GGCAATGATGATGGTAATGGTCATAT 59.621 38.462 0.00 0.00 33.03 1.78
3026 3224 0.684535 TAGCAAGCCACTGTAGTGCA 59.315 50.000 6.50 0.00 44.34 4.57
3031 3229 2.105006 AGCCACTGTAGTGCAATCTG 57.895 50.000 6.50 0.00 44.34 2.90
3037 3235 5.215160 CCACTGTAGTGCAATCTGAAAAAC 58.785 41.667 6.50 0.00 44.34 2.43
3040 3238 2.422276 AGTGCAATCTGAAAAACCGC 57.578 45.000 0.00 0.00 0.00 5.68
3057 3255 1.135859 CCGCATTCAGACTGAACTTGC 60.136 52.381 24.54 24.54 39.45 4.01
3241 3477 9.853177 ATAAAATAACTAGCAAGAGTATTGGCT 57.147 29.630 0.00 0.21 40.26 4.75
3274 3510 5.642063 GCAGTAAGAGTTTGCACTTGGTATA 59.358 40.000 0.00 0.00 37.75 1.47
3281 3517 0.916086 TGCACTTGGTATACCCCCAG 59.084 55.000 19.42 14.07 32.49 4.45
3295 3531 6.661740 ATACCCCCAGTAGGAAACAATTTA 57.338 37.500 0.00 0.00 38.24 1.40
3301 3537 4.457949 CCAGTAGGAAACAATTTAGCGGTT 59.542 41.667 0.00 0.00 36.89 4.44
3314 3550 1.154225 GCGGTTGGATGACTTTGCG 60.154 57.895 0.00 0.00 0.00 4.85
3377 3621 5.324784 TCTCAACGCACTATCACTACAAT 57.675 39.130 0.00 0.00 0.00 2.71
3416 3660 2.535166 CACATTCTTGTTGTTGTTGGCG 59.465 45.455 0.00 0.00 32.34 5.69
3436 3680 2.549992 CGACCAAACATTCAGGACAGGA 60.550 50.000 0.00 0.00 0.00 3.86
3492 3736 0.944311 TTCCAGCGACAAGAACGAGC 60.944 55.000 0.00 0.00 0.00 5.03
3518 3762 1.133915 ACGGACCAAAGGTTGACATGT 60.134 47.619 0.00 0.00 35.25 3.21
3523 3767 4.215613 GGACCAAAGGTTGACATGTAGTTC 59.784 45.833 0.00 0.00 35.25 3.01
3535 3779 5.519927 TGACATGTAGTTCGCATTACTCATG 59.480 40.000 0.00 0.00 37.28 3.07
3549 3793 8.875803 CGCATTACTCATGGTTTAAGTTAGTTA 58.124 33.333 0.00 0.00 32.81 2.24
3733 3977 6.321717 TCTTCAAATGTGAGTTTTGTGTCAC 58.678 36.000 0.00 0.00 42.93 3.67
3821 4065 2.423185 TGTGAAACAGAGCAACCAGTTG 59.577 45.455 6.15 6.15 45.67 3.16
3923 4167 7.584122 TTAACGACTATTAGAAGAGGCTGAT 57.416 36.000 0.00 0.00 0.00 2.90
3926 4170 5.772672 ACGACTATTAGAAGAGGCTGATCAT 59.227 40.000 0.00 0.00 0.00 2.45
3960 4204 5.172934 CAATGTAGATTTTGCATGCCTTGT 58.827 37.500 16.68 0.00 32.01 3.16
3991 4235 6.814506 TGTAGTAGCTCGATTTATCTACCC 57.185 41.667 0.00 0.00 33.70 3.69
4001 4245 7.226720 GCTCGATTTATCTACCCATCTGAAAAA 59.773 37.037 0.00 0.00 0.00 1.94
4042 4286 6.941857 ACTGGGTTACTTTGAACATGTTTTT 58.058 32.000 13.36 0.00 0.00 1.94
4080 4324 7.830940 AAATACGAATATGGTTTGTACGTGA 57.169 32.000 0.00 0.00 34.52 4.35
4103 4347 4.155462 AGACAGTGCACATGCTTTTATCAG 59.845 41.667 21.04 0.00 42.66 2.90
4126 4370 7.042051 TCAGGTTTCTTCATGTCTTCTTTAACG 60.042 37.037 0.00 0.00 0.00 3.18
4155 4399 9.459640 ACATATTGTGACACGTTCTGTATATAC 57.540 33.333 5.89 5.89 31.03 1.47
4223 4467 9.531158 TGATGGATGCATATCAATTTATAACCA 57.469 29.630 9.28 3.88 34.90 3.67
4248 4492 9.677567 CATATAAAACTGTATTTGATTTCCCCG 57.322 33.333 0.00 0.00 0.00 5.73
4258 4502 0.521735 GATTTCCCCGTGCAGTGTTC 59.478 55.000 0.00 0.00 0.00 3.18
4259 4503 1.234615 ATTTCCCCGTGCAGTGTTCG 61.235 55.000 0.00 0.00 0.00 3.95
4261 4505 4.988598 CCCCGTGCAGTGTTCGCT 62.989 66.667 0.00 0.00 0.00 4.93
4265 4509 0.248458 CCGTGCAGTGTTCGCTTTTT 60.248 50.000 0.00 0.00 0.00 1.94
4407 4651 9.930693 CTAGAGGAACTTTTGTCTAAGTATGTT 57.069 33.333 0.00 0.00 41.55 2.71
4455 4699 9.120538 TCACTAAAGTTAAGTTGCAGAAGAAAT 57.879 29.630 10.43 0.00 0.00 2.17
4540 4784 2.125512 GGTGGACTACCTGCAGCG 60.126 66.667 8.66 4.27 46.51 5.18
4617 4861 2.777832 ACCTGTTCTTCAGAGATGCC 57.222 50.000 0.00 0.00 46.27 4.40
4618 4862 1.066573 ACCTGTTCTTCAGAGATGCCG 60.067 52.381 0.00 0.00 46.27 5.69
4619 4863 1.066573 CCTGTTCTTCAGAGATGCCGT 60.067 52.381 0.00 0.00 46.27 5.68
4620 4864 1.998315 CTGTTCTTCAGAGATGCCGTG 59.002 52.381 0.00 0.00 46.27 4.94
4623 4867 0.532573 TCTTCAGAGATGCCGTGGAC 59.467 55.000 0.00 0.00 0.00 4.02
4809 5112 7.398024 AGAGATGCCATACTTTCTTGTACTTT 58.602 34.615 0.00 0.00 0.00 2.66
4909 5212 7.042321 TGGTGTATATTAGCGCTTCATGTTTAC 60.042 37.037 18.68 12.11 0.00 2.01
4912 5215 8.332464 TGTATATTAGCGCTTCATGTTTACAAC 58.668 33.333 18.68 2.40 0.00 3.32
4989 5292 2.489722 GCTTCTTCATCCCTGTTTCCAC 59.510 50.000 0.00 0.00 0.00 4.02
5041 5344 1.541588 TGCAGGATATCGAGTCATCCG 59.458 52.381 14.47 11.56 44.62 4.18
5076 5379 0.329596 ACCTCAAAGGCACCATCCTC 59.670 55.000 0.00 0.00 39.63 3.71
5098 5401 0.033504 TTCTTCCGATAGCGATGGCC 59.966 55.000 0.00 0.00 41.24 5.36
5141 5444 4.935702 TCTTTTGCTGTTCAAGACATTGG 58.064 39.130 0.00 0.00 37.69 3.16
5143 5446 1.689984 TGCTGTTCAAGACATTGGCA 58.310 45.000 0.00 0.00 37.69 4.92
5145 5448 1.610522 GCTGTTCAAGACATTGGCAGT 59.389 47.619 0.00 0.00 39.64 4.40
5158 5461 9.515226 AAGACATTGGCAGTTCTACTTTAAATA 57.485 29.630 0.00 0.00 0.00 1.40
5201 5504 1.668751 TGCTTGTCGGTTTGTTGACTC 59.331 47.619 0.00 0.00 36.10 3.36
5213 5516 6.128769 CGGTTTGTTGACTCGTGTTCATAATA 60.129 38.462 0.00 0.00 0.00 0.98
5441 5746 6.428159 AGCATCTGGAGTTTTAGTTTGTACTG 59.572 38.462 0.00 0.00 35.78 2.74
5442 5747 6.204882 GCATCTGGAGTTTTAGTTTGTACTGT 59.795 38.462 0.00 0.00 35.78 3.55
5443 5748 7.386848 GCATCTGGAGTTTTAGTTTGTACTGTA 59.613 37.037 0.00 0.00 35.78 2.74
5444 5749 9.436957 CATCTGGAGTTTTAGTTTGTACTGTAT 57.563 33.333 0.00 0.00 35.78 2.29
5506 5811 1.681166 CCTGTGCCAGAGGATTTGGAG 60.681 57.143 0.52 0.00 37.96 3.86
5525 7082 5.310451 TGGAGTATTTATTTACCCATCGCC 58.690 41.667 0.00 0.00 0.00 5.54
5535 7092 0.831307 ACCCATCGCCTAGGAAACTC 59.169 55.000 14.75 0.00 43.67 3.01
5584 7141 1.810455 TCTCAGATGATGGGATGGCA 58.190 50.000 0.00 0.00 31.63 4.92
5585 7142 1.697982 TCTCAGATGATGGGATGGCAG 59.302 52.381 0.00 0.00 31.63 4.85
5586 7143 1.697982 CTCAGATGATGGGATGGCAGA 59.302 52.381 0.00 0.00 0.00 4.26
5587 7144 2.306219 CTCAGATGATGGGATGGCAGAT 59.694 50.000 0.00 0.00 0.00 2.90
5588 7145 2.305052 TCAGATGATGGGATGGCAGATC 59.695 50.000 0.00 0.00 0.00 2.75
5589 7146 2.306219 CAGATGATGGGATGGCAGATCT 59.694 50.000 0.00 0.00 0.00 2.75
5590 7147 2.987437 AGATGATGGGATGGCAGATCTT 59.013 45.455 0.00 0.00 0.00 2.40
5591 7148 2.651382 TGATGGGATGGCAGATCTTG 57.349 50.000 0.00 0.00 0.00 3.02
5592 7149 1.848388 TGATGGGATGGCAGATCTTGT 59.152 47.619 0.00 0.00 0.00 3.16
5593 7150 2.228059 GATGGGATGGCAGATCTTGTG 58.772 52.381 0.00 0.00 0.00 3.33
5594 7151 0.394762 TGGGATGGCAGATCTTGTGC 60.395 55.000 0.00 0.00 40.42 4.57
5599 7156 2.482374 GCAGATCTTGTGCCACGC 59.518 61.111 0.00 0.00 34.67 5.34
5600 7157 3.044059 GCAGATCTTGTGCCACGCC 62.044 63.158 0.00 0.00 34.67 5.68
5601 7158 1.672030 CAGATCTTGTGCCACGCCA 60.672 57.895 0.00 0.00 0.00 5.69
5602 7159 1.672356 AGATCTTGTGCCACGCCAC 60.672 57.895 0.00 0.00 36.28 5.01
5603 7160 2.672996 ATCTTGTGCCACGCCACC 60.673 61.111 0.00 0.00 34.85 4.61
5604 7161 3.490031 ATCTTGTGCCACGCCACCA 62.490 57.895 0.00 0.00 34.85 4.17
5605 7162 3.663176 CTTGTGCCACGCCACCAG 61.663 66.667 0.00 0.00 34.85 4.00
5611 7168 3.687102 CCACGCCACCAGGTCGTA 61.687 66.667 6.03 0.00 42.77 3.43
5612 7169 2.577059 CACGCCACCAGGTCGTAT 59.423 61.111 6.03 0.00 42.77 3.06
5613 7170 1.809619 CACGCCACCAGGTCGTATG 60.810 63.158 6.03 0.00 42.77 2.39
5614 7171 1.980232 ACGCCACCAGGTCGTATGA 60.980 57.895 4.53 0.00 42.81 2.15
5615 7172 1.216977 CGCCACCAGGTCGTATGAA 59.783 57.895 0.00 0.00 37.19 2.57
5616 7173 0.390603 CGCCACCAGGTCGTATGAAA 60.391 55.000 0.00 0.00 37.19 2.69
5617 7174 1.084289 GCCACCAGGTCGTATGAAAC 58.916 55.000 0.00 0.00 37.19 2.78
5618 7175 1.338769 GCCACCAGGTCGTATGAAACT 60.339 52.381 0.00 0.00 37.19 2.66
5619 7176 2.346803 CCACCAGGTCGTATGAAACTG 58.653 52.381 9.78 9.78 33.45 3.16
5621 7178 1.369625 CCAGGTCGTATGAAACTGGC 58.630 55.000 18.76 0.00 41.67 4.85
5622 7179 1.338674 CCAGGTCGTATGAAACTGGCA 60.339 52.381 18.76 0.00 41.67 4.92
5623 7180 2.632377 CAGGTCGTATGAAACTGGCAT 58.368 47.619 9.12 0.00 31.29 4.40
5624 7181 2.352651 CAGGTCGTATGAAACTGGCATG 59.647 50.000 9.12 0.00 31.29 4.06
5625 7182 1.064060 GGTCGTATGAAACTGGCATGC 59.936 52.381 9.90 9.90 0.00 4.06
5626 7183 1.737236 GTCGTATGAAACTGGCATGCA 59.263 47.619 21.36 4.79 0.00 3.96
5627 7184 2.355756 GTCGTATGAAACTGGCATGCAT 59.644 45.455 21.36 4.77 0.00 3.96
5628 7185 2.613595 TCGTATGAAACTGGCATGCATC 59.386 45.455 21.36 9.57 0.00 3.91
5629 7186 2.287188 CGTATGAAACTGGCATGCATCC 60.287 50.000 21.36 2.31 0.00 3.51
5630 7187 2.154567 ATGAAACTGGCATGCATCCT 57.845 45.000 21.36 0.00 0.00 3.24
5631 7188 1.179152 TGAAACTGGCATGCATCCTG 58.821 50.000 21.36 8.79 0.00 3.86
5632 7189 0.458669 GAAACTGGCATGCATCCTGG 59.541 55.000 21.36 4.77 0.00 4.45
5633 7190 1.610554 AAACTGGCATGCATCCTGGC 61.611 55.000 21.36 13.73 39.47 4.85
5634 7191 2.123854 CTGGCATGCATCCTGGCT 60.124 61.111 21.36 0.00 39.72 4.75
5635 7192 2.124024 TGGCATGCATCCTGGCTC 60.124 61.111 21.36 0.00 39.72 4.70
5636 7193 2.910994 GGCATGCATCCTGGCTCC 60.911 66.667 21.36 0.00 36.34 4.70
5637 7194 2.910994 GCATGCATCCTGGCTCCC 60.911 66.667 14.21 0.00 34.04 4.30
5638 7195 2.593725 CATGCATCCTGGCTCCCG 60.594 66.667 0.00 0.00 34.04 5.14
5639 7196 3.882326 ATGCATCCTGGCTCCCGG 61.882 66.667 0.00 0.00 34.04 5.73
5646 7203 3.971894 CTGGCTCCCGGGACTATT 58.028 61.111 22.63 0.00 0.00 1.73
5647 7204 2.221918 CTGGCTCCCGGGACTATTT 58.778 57.895 22.63 0.00 0.00 1.40
5648 7205 0.106894 CTGGCTCCCGGGACTATTTC 59.893 60.000 22.63 6.07 0.00 2.17
5649 7206 0.619255 TGGCTCCCGGGACTATTTCA 60.619 55.000 22.63 8.76 0.00 2.69
5650 7207 0.765510 GGCTCCCGGGACTATTTCAT 59.234 55.000 22.63 0.00 0.00 2.57
5651 7208 1.975680 GGCTCCCGGGACTATTTCATA 59.024 52.381 22.63 0.00 0.00 2.15
5652 7209 2.028020 GGCTCCCGGGACTATTTCATAG 60.028 54.545 22.63 6.92 38.81 2.23
5654 7211 3.830755 GCTCCCGGGACTATTTCATAGTA 59.169 47.826 22.63 0.00 45.64 1.82
5655 7212 4.466726 GCTCCCGGGACTATTTCATAGTAT 59.533 45.833 22.63 0.00 45.64 2.12
5656 7213 5.046520 GCTCCCGGGACTATTTCATAGTATT 60.047 44.000 22.63 0.00 45.64 1.89
5657 7214 6.354794 TCCCGGGACTATTTCATAGTATTG 57.645 41.667 22.63 0.00 45.64 1.90
5658 7215 4.935808 CCCGGGACTATTTCATAGTATTGC 59.064 45.833 18.48 0.00 45.64 3.56
5659 7216 5.512404 CCCGGGACTATTTCATAGTATTGCA 60.512 44.000 18.48 0.00 45.64 4.08
5660 7217 5.995282 CCGGGACTATTTCATAGTATTGCAA 59.005 40.000 0.00 0.00 45.64 4.08
5661 7218 6.073222 CCGGGACTATTTCATAGTATTGCAAC 60.073 42.308 0.00 0.00 45.64 4.17
5662 7219 6.481976 CGGGACTATTTCATAGTATTGCAACA 59.518 38.462 0.00 0.00 45.64 3.33
5663 7220 7.011950 CGGGACTATTTCATAGTATTGCAACAA 59.988 37.037 0.00 0.00 45.64 2.83
5664 7221 8.850156 GGGACTATTTCATAGTATTGCAACAAT 58.150 33.333 0.00 0.00 45.64 2.71
5670 7227 9.807649 ATTTCATAGTATTGCAACAATTTCTCC 57.192 29.630 0.00 0.00 0.00 3.71
5671 7228 7.333528 TCATAGTATTGCAACAATTTCTCCC 57.666 36.000 0.00 0.00 0.00 4.30
5672 7229 6.889177 TCATAGTATTGCAACAATTTCTCCCA 59.111 34.615 0.00 0.00 0.00 4.37
5673 7230 5.391312 AGTATTGCAACAATTTCTCCCAC 57.609 39.130 0.00 0.00 0.00 4.61
5674 7231 5.079643 AGTATTGCAACAATTTCTCCCACT 58.920 37.500 0.00 0.00 0.00 4.00
5675 7232 4.525912 ATTGCAACAATTTCTCCCACTC 57.474 40.909 0.00 0.00 0.00 3.51
5676 7233 2.238521 TGCAACAATTTCTCCCACTCC 58.761 47.619 0.00 0.00 0.00 3.85
5677 7234 2.158475 TGCAACAATTTCTCCCACTCCT 60.158 45.455 0.00 0.00 0.00 3.69
5678 7235 2.489722 GCAACAATTTCTCCCACTCCTC 59.510 50.000 0.00 0.00 0.00 3.71
5679 7236 3.754965 CAACAATTTCTCCCACTCCTCA 58.245 45.455 0.00 0.00 0.00 3.86
5680 7237 4.144297 CAACAATTTCTCCCACTCCTCAA 58.856 43.478 0.00 0.00 0.00 3.02
5681 7238 4.453480 ACAATTTCTCCCACTCCTCAAA 57.547 40.909 0.00 0.00 0.00 2.69
5682 7239 4.803452 ACAATTTCTCCCACTCCTCAAAA 58.197 39.130 0.00 0.00 0.00 2.44
5683 7240 4.584743 ACAATTTCTCCCACTCCTCAAAAC 59.415 41.667 0.00 0.00 0.00 2.43
5684 7241 2.951229 TTCTCCCACTCCTCAAAACC 57.049 50.000 0.00 0.00 0.00 3.27
5685 7242 1.064825 TCTCCCACTCCTCAAAACCC 58.935 55.000 0.00 0.00 0.00 4.11
5686 7243 1.068121 CTCCCACTCCTCAAAACCCT 58.932 55.000 0.00 0.00 0.00 4.34
5687 7244 2.158066 TCTCCCACTCCTCAAAACCCTA 60.158 50.000 0.00 0.00 0.00 3.53
5688 7245 2.642807 CTCCCACTCCTCAAAACCCTAA 59.357 50.000 0.00 0.00 0.00 2.69
5689 7246 3.057586 TCCCACTCCTCAAAACCCTAAA 58.942 45.455 0.00 0.00 0.00 1.85
5690 7247 3.073946 TCCCACTCCTCAAAACCCTAAAG 59.926 47.826 0.00 0.00 0.00 1.85
5691 7248 3.421844 CCACTCCTCAAAACCCTAAAGG 58.578 50.000 0.00 0.00 43.78 3.11
5692 7249 3.073946 CCACTCCTCAAAACCCTAAAGGA 59.926 47.826 0.00 0.00 39.89 3.36
5693 7250 4.447180 CCACTCCTCAAAACCCTAAAGGAA 60.447 45.833 0.00 0.00 39.89 3.36
5694 7251 4.519350 CACTCCTCAAAACCCTAAAGGAAC 59.481 45.833 0.00 0.00 39.89 3.62
5695 7252 4.079970 CTCCTCAAAACCCTAAAGGAACC 58.920 47.826 0.00 0.00 39.89 3.62
5696 7253 2.817844 CCTCAAAACCCTAAAGGAACCG 59.182 50.000 0.00 0.00 39.89 4.44
5697 7254 3.497227 CCTCAAAACCCTAAAGGAACCGA 60.497 47.826 0.00 0.00 39.89 4.69
5698 7255 3.746940 TCAAAACCCTAAAGGAACCGAG 58.253 45.455 0.00 0.00 39.89 4.63
5699 7256 3.136992 TCAAAACCCTAAAGGAACCGAGT 59.863 43.478 0.00 0.00 39.89 4.18
5700 7257 3.870538 AAACCCTAAAGGAACCGAGTT 57.129 42.857 0.00 0.00 39.89 3.01
5701 7258 2.853235 ACCCTAAAGGAACCGAGTTG 57.147 50.000 0.00 0.00 39.89 3.16
5702 7259 2.332117 ACCCTAAAGGAACCGAGTTGA 58.668 47.619 0.00 0.00 39.89 3.18
5703 7260 2.038164 ACCCTAAAGGAACCGAGTTGAC 59.962 50.000 0.00 0.00 39.89 3.18
5704 7261 2.334838 CCTAAAGGAACCGAGTTGACG 58.665 52.381 0.00 0.00 37.39 4.35
5705 7262 1.725164 CTAAAGGAACCGAGTTGACGC 59.275 52.381 0.00 0.00 0.00 5.19
5706 7263 0.106149 AAAGGAACCGAGTTGACGCT 59.894 50.000 0.00 0.00 0.00 5.07
5707 7264 0.319641 AAGGAACCGAGTTGACGCTC 60.320 55.000 0.00 0.00 0.00 5.03
5708 7265 1.737008 GGAACCGAGTTGACGCTCC 60.737 63.158 0.00 0.00 32.11 4.70
5709 7266 1.737008 GAACCGAGTTGACGCTCCC 60.737 63.158 0.00 0.00 32.11 4.30
5710 7267 3.569049 AACCGAGTTGACGCTCCCG 62.569 63.158 0.00 0.00 41.14 5.14
5712 7269 4.717629 CGAGTTGACGCTCCCGCA 62.718 66.667 0.00 0.00 38.22 5.69
5713 7270 2.125512 GAGTTGACGCTCCCGCAT 60.126 61.111 0.00 0.00 38.22 4.73
5714 7271 2.125512 AGTTGACGCTCCCGCATC 60.126 61.111 0.00 0.00 38.22 3.91
5715 7272 2.434185 GTTGACGCTCCCGCATCA 60.434 61.111 0.00 0.00 38.22 3.07
5716 7273 2.032634 GTTGACGCTCCCGCATCAA 61.033 57.895 0.00 0.00 38.22 2.57
5717 7274 1.078497 TTGACGCTCCCGCATCAAT 60.078 52.632 0.00 0.00 38.22 2.57
5718 7275 0.176910 TTGACGCTCCCGCATCAATA 59.823 50.000 0.00 0.00 38.22 1.90
5719 7276 0.249447 TGACGCTCCCGCATCAATAG 60.249 55.000 0.00 0.00 38.22 1.73
5720 7277 1.560860 GACGCTCCCGCATCAATAGC 61.561 60.000 0.00 0.00 38.22 2.97
5721 7278 1.595109 CGCTCCCGCATCAATAGCA 60.595 57.895 0.00 0.00 35.30 3.49
5722 7279 0.952497 CGCTCCCGCATCAATAGCAT 60.952 55.000 0.00 0.00 35.30 3.79
5723 7280 0.520404 GCTCCCGCATCAATAGCATG 59.480 55.000 0.00 0.00 35.78 4.06
5724 7281 1.879372 GCTCCCGCATCAATAGCATGA 60.879 52.381 0.00 0.00 35.78 3.07
5725 7282 2.074576 CTCCCGCATCAATAGCATGAG 58.925 52.381 0.00 0.00 31.76 2.90
5726 7283 1.417517 TCCCGCATCAATAGCATGAGT 59.582 47.619 0.00 0.00 31.76 3.41
5727 7284 2.632512 TCCCGCATCAATAGCATGAGTA 59.367 45.455 0.00 0.00 31.76 2.59
5728 7285 2.998670 CCCGCATCAATAGCATGAGTAG 59.001 50.000 0.00 0.00 31.76 2.57
5729 7286 3.555795 CCCGCATCAATAGCATGAGTAGT 60.556 47.826 0.00 0.00 31.76 2.73
5730 7287 4.060900 CCGCATCAATAGCATGAGTAGTT 58.939 43.478 0.00 0.00 31.76 2.24
5731 7288 4.084171 CCGCATCAATAGCATGAGTAGTTG 60.084 45.833 0.00 0.00 31.76 3.16
5732 7289 4.746611 CGCATCAATAGCATGAGTAGTTGA 59.253 41.667 0.00 0.00 31.76 3.18
5733 7290 5.234972 CGCATCAATAGCATGAGTAGTTGAA 59.765 40.000 0.00 0.00 31.76 2.69
5734 7291 6.563567 CGCATCAATAGCATGAGTAGTTGAAG 60.564 42.308 0.00 0.00 31.76 3.02
5735 7292 6.656945 CATCAATAGCATGAGTAGTTGAAGC 58.343 40.000 0.00 0.00 31.76 3.86
5736 7293 5.733676 TCAATAGCATGAGTAGTTGAAGCA 58.266 37.500 0.00 0.00 0.00 3.91
5737 7294 6.172630 TCAATAGCATGAGTAGTTGAAGCAA 58.827 36.000 0.00 0.00 0.00 3.91
5738 7295 6.314648 TCAATAGCATGAGTAGTTGAAGCAAG 59.685 38.462 0.00 0.00 0.00 4.01
5739 7296 4.013267 AGCATGAGTAGTTGAAGCAAGT 57.987 40.909 0.00 0.00 0.00 3.16
5740 7297 3.750130 AGCATGAGTAGTTGAAGCAAGTG 59.250 43.478 0.00 0.00 0.00 3.16
5741 7298 3.748048 GCATGAGTAGTTGAAGCAAGTGA 59.252 43.478 0.00 0.00 0.00 3.41
5742 7299 4.214119 GCATGAGTAGTTGAAGCAAGTGAA 59.786 41.667 0.00 0.00 0.00 3.18
5743 7300 5.106396 GCATGAGTAGTTGAAGCAAGTGAAT 60.106 40.000 0.00 0.00 0.00 2.57
5744 7301 5.929697 TGAGTAGTTGAAGCAAGTGAATG 57.070 39.130 0.00 0.00 0.00 2.67
5745 7302 5.610398 TGAGTAGTTGAAGCAAGTGAATGA 58.390 37.500 0.00 0.00 0.00 2.57
5746 7303 6.233434 TGAGTAGTTGAAGCAAGTGAATGAT 58.767 36.000 0.00 0.00 0.00 2.45
5747 7304 6.712095 TGAGTAGTTGAAGCAAGTGAATGATT 59.288 34.615 0.00 0.00 0.00 2.57
5748 7305 7.229306 TGAGTAGTTGAAGCAAGTGAATGATTT 59.771 33.333 0.00 0.00 0.00 2.17
5749 7306 7.365741 AGTAGTTGAAGCAAGTGAATGATTTG 58.634 34.615 0.00 0.00 0.00 2.32
5750 7307 6.395426 AGTTGAAGCAAGTGAATGATTTGA 57.605 33.333 0.00 0.00 0.00 2.69
5751 7308 6.808829 AGTTGAAGCAAGTGAATGATTTGAA 58.191 32.000 0.00 0.00 0.00 2.69
5752 7309 7.267128 AGTTGAAGCAAGTGAATGATTTGAAA 58.733 30.769 0.00 0.00 0.00 2.69
5753 7310 7.929785 AGTTGAAGCAAGTGAATGATTTGAAAT 59.070 29.630 0.00 0.00 0.00 2.17
5754 7311 8.553696 GTTGAAGCAAGTGAATGATTTGAAATT 58.446 29.630 0.00 0.00 0.00 1.82
5755 7312 8.301730 TGAAGCAAGTGAATGATTTGAAATTC 57.698 30.769 0.00 0.00 34.11 2.17
5756 7313 7.927092 TGAAGCAAGTGAATGATTTGAAATTCA 59.073 29.630 0.00 0.00 39.79 2.57
5764 7321 9.654417 GTGAATGATTTGAAATTCAAGTTTTGG 57.346 29.630 8.51 0.00 42.72 3.28
5775 7332 2.834549 TCAAGTTTTGGGCTTTTGGACA 59.165 40.909 0.00 0.00 0.00 4.02
5820 7377 1.134189 GGAAAACAGCTACCGCCCTAT 60.134 52.381 0.00 0.00 36.60 2.57
5824 7381 1.146041 CAGCTACCGCCCTATTGCA 59.854 57.895 0.00 0.00 36.60 4.08
5852 7409 2.178783 CTGTTTCGGCGAAAACGTTTT 58.821 42.857 33.66 25.46 41.12 2.43
5853 7410 3.181512 ACTGTTTCGGCGAAAACGTTTTA 60.182 39.130 33.66 9.49 41.12 1.52
5854 7411 3.352652 TGTTTCGGCGAAAACGTTTTAG 58.647 40.909 33.66 24.67 41.12 1.85
5855 7412 3.063180 TGTTTCGGCGAAAACGTTTTAGA 59.937 39.130 33.66 21.14 41.12 2.10
5856 7413 4.213674 GTTTCGGCGAAAACGTTTTAGAT 58.786 39.130 33.66 10.11 33.14 1.98
5857 7414 3.443054 TCGGCGAAAACGTTTTAGATG 57.557 42.857 30.16 21.96 0.00 2.90
5858 7415 2.158058 TCGGCGAAAACGTTTTAGATGG 59.842 45.455 30.16 19.59 0.00 3.51
5861 7418 2.908626 GCGAAAACGTTTTAGATGGCTG 59.091 45.455 30.16 13.54 0.00 4.85
5863 7420 3.058501 CGAAAACGTTTTAGATGGCTGGT 60.059 43.478 25.26 0.00 0.00 4.00
5865 7422 2.851263 ACGTTTTAGATGGCTGGTCA 57.149 45.000 0.00 0.00 0.00 4.02
5866 7423 2.423577 ACGTTTTAGATGGCTGGTCAC 58.576 47.619 0.00 0.00 0.00 3.67
5867 7424 2.224426 ACGTTTTAGATGGCTGGTCACA 60.224 45.455 0.00 0.00 0.00 3.58
5868 7425 3.009723 CGTTTTAGATGGCTGGTCACAT 58.990 45.455 0.00 0.00 0.00 3.21
5869 7426 3.063997 CGTTTTAGATGGCTGGTCACATC 59.936 47.826 0.00 0.00 42.87 3.06
5870 7427 3.998913 TTTAGATGGCTGGTCACATCA 57.001 42.857 7.32 0.00 44.50 3.07
5873 7430 1.209019 AGATGGCTGGTCACATCACTC 59.791 52.381 7.32 0.00 44.50 3.51
5875 7432 0.035317 TGGCTGGTCACATCACTCAC 59.965 55.000 0.00 0.00 0.00 3.51
5880 7437 3.674682 GCTGGTCACATCACTCACTCTAC 60.675 52.174 0.00 0.00 0.00 2.59
5882 7439 2.488545 GGTCACATCACTCACTCTACGT 59.511 50.000 0.00 0.00 0.00 3.57
5884 7441 3.914966 GTCACATCACTCACTCTACGTTG 59.085 47.826 0.00 0.00 0.00 4.10
5885 7442 3.818773 TCACATCACTCACTCTACGTTGA 59.181 43.478 0.00 0.00 0.00 3.18
5887 7444 4.383052 CACATCACTCACTCTACGTTGAAC 59.617 45.833 0.00 0.00 0.00 3.18
5889 7446 2.874086 TCACTCACTCTACGTTGAACGA 59.126 45.455 25.62 7.18 46.05 3.85
5890 7447 3.313249 TCACTCACTCTACGTTGAACGAA 59.687 43.478 25.62 8.26 46.05 3.85
5891 7448 4.039703 CACTCACTCTACGTTGAACGAAA 58.960 43.478 25.62 10.78 46.05 3.46
5893 7450 4.738740 ACTCACTCTACGTTGAACGAAAAG 59.261 41.667 25.62 18.11 46.05 2.27
5894 7451 4.923893 TCACTCTACGTTGAACGAAAAGA 58.076 39.130 25.62 19.91 46.05 2.52
5895 7452 5.526115 TCACTCTACGTTGAACGAAAAGAT 58.474 37.500 25.62 2.89 46.05 2.40
5896 7453 6.671190 TCACTCTACGTTGAACGAAAAGATA 58.329 36.000 25.62 4.03 46.05 1.98
5897 7454 7.140705 TCACTCTACGTTGAACGAAAAGATAA 58.859 34.615 25.62 8.88 46.05 1.75
5898 7455 7.325338 TCACTCTACGTTGAACGAAAAGATAAG 59.675 37.037 25.62 13.11 46.05 1.73
5899 7456 6.089150 ACTCTACGTTGAACGAAAAGATAAGC 59.911 38.462 25.62 0.00 46.05 3.09
5900 7457 6.154445 TCTACGTTGAACGAAAAGATAAGCT 58.846 36.000 25.62 0.00 46.05 3.74
5901 7458 5.018695 ACGTTGAACGAAAAGATAAGCTG 57.981 39.130 25.62 0.00 46.05 4.24
5903 7460 5.235616 ACGTTGAACGAAAAGATAAGCTGAA 59.764 36.000 25.62 0.00 46.05 3.02
5904 7461 6.133392 CGTTGAACGAAAAGATAAGCTGAAA 58.867 36.000 13.13 0.00 46.05 2.69
5905 7462 6.300902 CGTTGAACGAAAAGATAAGCTGAAAG 59.699 38.462 13.13 0.00 46.05 2.62
5906 7463 6.241207 TGAACGAAAAGATAAGCTGAAAGG 57.759 37.500 0.00 0.00 0.00 3.11
5917 7474 0.447801 GCTGAAAGGTGCATGGTACG 59.552 55.000 0.00 0.00 0.00 3.67
5919 7476 2.422597 CTGAAAGGTGCATGGTACGAA 58.577 47.619 0.00 0.00 0.00 3.85
5921 7478 2.147958 GAAAGGTGCATGGTACGAACA 58.852 47.619 0.00 0.00 0.00 3.18
5922 7479 1.808411 AAGGTGCATGGTACGAACAG 58.192 50.000 0.00 0.00 0.00 3.16
5923 7480 0.685097 AGGTGCATGGTACGAACAGT 59.315 50.000 0.00 0.00 0.00 3.55
5924 7481 0.796312 GGTGCATGGTACGAACAGTG 59.204 55.000 0.00 0.00 0.00 3.66
5928 8837 2.147958 GCATGGTACGAACAGTGGAAA 58.852 47.619 0.00 0.00 0.00 3.13
5940 8849 5.559035 CGAACAGTGGAAACAGATGAACTTC 60.559 44.000 0.00 0.00 44.46 3.01
5941 8850 4.780815 ACAGTGGAAACAGATGAACTTCA 58.219 39.130 0.00 0.00 44.46 3.02
5944 8853 5.973565 CAGTGGAAACAGATGAACTTCAAAC 59.026 40.000 0.00 0.00 44.46 2.93
5945 8854 5.888161 AGTGGAAACAGATGAACTTCAAACT 59.112 36.000 0.00 0.00 44.46 2.66
5946 8855 7.012327 CAGTGGAAACAGATGAACTTCAAACTA 59.988 37.037 0.00 0.00 44.46 2.24
5947 8856 7.721399 AGTGGAAACAGATGAACTTCAAACTAT 59.279 33.333 0.00 0.00 44.46 2.12
5948 8857 8.999431 GTGGAAACAGATGAACTTCAAACTATA 58.001 33.333 0.00 0.00 44.46 1.31
5949 8858 9.739276 TGGAAACAGATGAACTTCAAACTATAT 57.261 29.630 0.00 0.00 35.01 0.86
5983 8907 5.620738 ATCCCATATGAATATGTCTCCGG 57.379 43.478 3.65 0.00 38.73 5.14
5985 8909 5.280499 TCCCATATGAATATGTCTCCGGAT 58.720 41.667 3.57 0.00 38.73 4.18
5996 8920 8.437274 AATATGTCTCCGGATAATCCTAAAGT 57.563 34.615 3.57 0.00 33.30 2.66
5997 8921 5.531122 TGTCTCCGGATAATCCTAAAGTG 57.469 43.478 3.57 0.00 33.30 3.16
6002 8926 7.446625 GTCTCCGGATAATCCTAAAGTGTACTA 59.553 40.741 3.57 0.00 33.30 1.82
6079 9003 3.244665 TGCTGCAAGTCATATATCCCCTG 60.245 47.826 0.00 0.00 35.30 4.45
6089 9013 5.485353 GTCATATATCCCCTGACCATCTGAA 59.515 44.000 0.00 0.00 34.55 3.02
6111 9035 8.783660 TGAAAAATCTATTCTCTAGGCTCCTA 57.216 34.615 0.00 0.00 0.00 2.94
6115 9039 1.623163 ATTCTCTAGGCTCCTACCGC 58.377 55.000 0.00 0.00 33.69 5.68
6185 9109 3.457625 CTGCTCATCGCTCCCCTGG 62.458 68.421 0.00 0.00 40.11 4.45
6248 9334 5.362717 TGCAGCTGGTAAGTATATGTACTGT 59.637 40.000 17.12 0.00 40.24 3.55
6277 9363 1.106944 CCAACTTGTTGGTTCCGGCT 61.107 55.000 20.87 0.00 37.32 5.52
6279 9365 1.106944 AACTTGTTGGTTCCGGCTGG 61.107 55.000 4.71 4.71 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 133 8.527810 ACAACCGATAAAATGGTGAAATGTATT 58.472 29.630 0.00 0.00 38.82 1.89
133 135 7.362229 GGACAACCGATAAAATGGTGAAATGTA 60.362 37.037 0.00 0.00 38.82 2.29
136 138 5.961272 GGACAACCGATAAAATGGTGAAAT 58.039 37.500 0.00 0.00 38.82 2.17
189 191 6.509418 TCACCCAAGTTATCAAAATGTAGC 57.491 37.500 0.00 0.00 0.00 3.58
308 311 1.772156 AGAGAGGGGCAATAGGGGC 60.772 63.158 0.00 0.00 0.00 5.80
335 344 4.929808 GCCACGTAGAAAATTGAGAGAGAA 59.070 41.667 0.00 0.00 0.00 2.87
352 361 1.333177 GAGGGATCATAGAGCCACGT 58.667 55.000 3.53 0.00 40.28 4.49
587 596 5.543405 TGAAATGAATGGACAGGACCAAAAT 59.457 36.000 0.00 0.00 43.47 1.82
595 604 8.915057 ATAGTAGAATGAAATGAATGGACAGG 57.085 34.615 0.00 0.00 0.00 4.00
614 623 5.279384 ACGGTGCGACAGATTTTATAGTAG 58.721 41.667 0.00 0.00 0.00 2.57
646 656 1.468914 CGCAGGCTAACTTTCTTTCCC 59.531 52.381 0.00 0.00 0.00 3.97
671 681 2.758736 AGAGAGTCAGATTGCGCTTT 57.241 45.000 9.73 0.00 0.00 3.51
677 687 4.703645 TCACCGTTAGAGAGTCAGATTG 57.296 45.455 0.00 0.00 0.00 2.67
703 713 1.134965 GTACTCTGACCGAAGCAGCAT 60.135 52.381 0.00 0.00 33.45 3.79
706 716 2.600731 CAAGTACTCTGACCGAAGCAG 58.399 52.381 0.00 0.00 34.71 4.24
761 881 9.408069 CGTCAGTCTAACTAGAACAAACTTAAT 57.592 33.333 0.00 0.00 33.47 1.40
763 883 8.158169 TCGTCAGTCTAACTAGAACAAACTTA 57.842 34.615 0.00 0.00 33.47 2.24
770 890 3.690628 AGGCTCGTCAGTCTAACTAGAAC 59.309 47.826 0.00 0.00 30.42 3.01
773 893 4.705337 AAAGGCTCGTCAGTCTAACTAG 57.295 45.455 0.00 0.00 31.25 2.57
775 895 4.333690 TCTAAAGGCTCGTCAGTCTAACT 58.666 43.478 0.00 0.00 31.25 2.24
779 899 3.511934 ACAATCTAAAGGCTCGTCAGTCT 59.488 43.478 0.00 0.00 35.42 3.24
793 913 7.097192 ACGAGTTTGCTCATAAGACAATCTAA 58.903 34.615 0.00 0.00 41.71 2.10
804 924 6.519679 TTAACCTCTACGAGTTTGCTCATA 57.480 37.500 0.00 0.00 41.71 2.15
805 925 3.963428 AACCTCTACGAGTTTGCTCAT 57.037 42.857 0.00 0.00 41.71 2.90
845 976 3.257933 CACTTCTTGCTGTCCGGC 58.742 61.111 0.00 0.00 0.00 6.13
883 1033 0.039180 TCTCGTTGGGGCTCTGTCTA 59.961 55.000 0.00 0.00 0.00 2.59
922 1073 0.325933 TGGAGGTGCTGTGGAGATTG 59.674 55.000 0.00 0.00 0.00 2.67
935 1087 1.518903 GCGCTTTTTCTGCTGGAGGT 61.519 55.000 0.00 0.00 0.00 3.85
1561 1722 0.387750 ACGCGAGGGTTTAGTTCGAC 60.388 55.000 15.93 0.00 36.49 4.20
1564 1725 1.681025 GCGACGCGAGGGTTTAGTTC 61.681 60.000 15.93 0.00 0.00 3.01
1565 1726 1.735559 GCGACGCGAGGGTTTAGTT 60.736 57.895 15.93 0.00 0.00 2.24
1579 1740 2.469516 CCCCAAATGCCTACGCGAC 61.470 63.158 15.93 0.00 38.08 5.19
1580 1741 2.124901 CCCCAAATGCCTACGCGA 60.125 61.111 15.93 0.00 38.08 5.87
1599 1760 1.884926 GCCGAATCGAAGGGCTCTG 60.885 63.158 15.16 0.00 43.52 3.35
1691 1854 3.936372 TGTATCTATCTTGCCGCTACC 57.064 47.619 0.00 0.00 0.00 3.18
1701 1864 5.310857 GGGGAGGTGGAAATTGTATCTATCT 59.689 44.000 0.00 0.00 0.00 1.98
1702 1865 5.310857 AGGGGAGGTGGAAATTGTATCTATC 59.689 44.000 0.00 0.00 0.00 2.08
1703 1866 5.073691 CAGGGGAGGTGGAAATTGTATCTAT 59.926 44.000 0.00 0.00 0.00 1.98
1704 1867 4.412199 CAGGGGAGGTGGAAATTGTATCTA 59.588 45.833 0.00 0.00 0.00 1.98
1710 1873 2.299867 CAAACAGGGGAGGTGGAAATTG 59.700 50.000 0.00 0.00 0.00 2.32
1739 1902 5.818136 TGCTCAAATCTAGGTAATGCAAC 57.182 39.130 0.00 0.00 0.00 4.17
1741 1904 5.997746 GGTATGCTCAAATCTAGGTAATGCA 59.002 40.000 0.00 0.00 0.00 3.96
1742 1905 5.412904 GGGTATGCTCAAATCTAGGTAATGC 59.587 44.000 0.00 0.00 0.00 3.56
1823 1990 0.798776 CAGCGTGATGGGTGAAGAAC 59.201 55.000 0.00 0.00 37.61 3.01
1904 2073 2.435372 ACACAGGACAAGCAGGAAAA 57.565 45.000 0.00 0.00 0.00 2.29
1956 2125 9.916360 AGGGAATTAAGTATAACGAATTTTCCT 57.084 29.630 0.00 0.00 0.00 3.36
1957 2126 9.946165 CAGGGAATTAAGTATAACGAATTTTCC 57.054 33.333 0.00 0.00 0.00 3.13
1959 2128 8.410912 GGCAGGGAATTAAGTATAACGAATTTT 58.589 33.333 0.00 0.00 0.00 1.82
1960 2129 7.558444 TGGCAGGGAATTAAGTATAACGAATTT 59.442 33.333 0.00 0.00 0.00 1.82
1963 2132 5.991861 TGGCAGGGAATTAAGTATAACGAA 58.008 37.500 0.00 0.00 0.00 3.85
1964 2133 5.617528 TGGCAGGGAATTAAGTATAACGA 57.382 39.130 0.00 0.00 0.00 3.85
1985 2154 3.399879 GGCAACGGCACAATACTTG 57.600 52.632 0.00 0.00 43.71 3.16
2022 2191 6.604795 ACCTGCTGCTGAATTTCTAATACAAT 59.395 34.615 8.20 0.00 0.00 2.71
2031 2200 2.816087 TCAAGACCTGCTGCTGAATTTC 59.184 45.455 8.20 0.00 0.00 2.17
2051 2220 8.677148 TCCTTACAGCCTTATAAACAATGATC 57.323 34.615 0.00 0.00 0.00 2.92
2111 2280 2.267961 CCACCTTACGCACCCTCC 59.732 66.667 0.00 0.00 0.00 4.30
2113 2282 4.029809 GCCCACCTTACGCACCCT 62.030 66.667 0.00 0.00 0.00 4.34
2114 2283 2.260088 TATGCCCACCTTACGCACCC 62.260 60.000 0.00 0.00 34.87 4.61
2117 2286 2.020720 CAATTATGCCCACCTTACGCA 58.979 47.619 0.00 0.00 36.84 5.24
2118 2287 2.021457 ACAATTATGCCCACCTTACGC 58.979 47.619 0.00 0.00 0.00 4.42
2119 2288 4.274950 CCTTACAATTATGCCCACCTTACG 59.725 45.833 0.00 0.00 0.00 3.18
2120 2289 4.037565 GCCTTACAATTATGCCCACCTTAC 59.962 45.833 0.00 0.00 0.00 2.34
2121 2290 4.211920 GCCTTACAATTATGCCCACCTTA 58.788 43.478 0.00 0.00 0.00 2.69
2122 2291 3.031013 GCCTTACAATTATGCCCACCTT 58.969 45.455 0.00 0.00 0.00 3.50
2123 2292 2.024464 TGCCTTACAATTATGCCCACCT 60.024 45.455 0.00 0.00 0.00 4.00
2124 2293 2.100749 GTGCCTTACAATTATGCCCACC 59.899 50.000 0.00 0.00 0.00 4.61
2162 2332 0.613260 AAGGCATCGACACTTAGGCA 59.387 50.000 0.00 0.00 0.00 4.75
2170 2340 5.189928 ACCATTGTTTATAAGGCATCGACA 58.810 37.500 0.00 0.00 0.00 4.35
2174 2344 9.683069 CATTAAGACCATTGTTTATAAGGCATC 57.317 33.333 0.00 0.00 0.00 3.91
2176 2346 7.123397 TGCATTAAGACCATTGTTTATAAGGCA 59.877 33.333 0.00 0.00 34.53 4.75
2187 2357 5.824904 AAGCTACTGCATTAAGACCATTG 57.175 39.130 0.00 0.00 42.74 2.82
2276 2462 5.350365 TCAATATCAACCTACTGACGCAAAC 59.650 40.000 0.00 0.00 0.00 2.93
2282 2468 8.893219 TCATCATTCAATATCAACCTACTGAC 57.107 34.615 0.00 0.00 0.00 3.51
2336 2522 3.440173 TCGGAACAATTCTCATTGGCTTC 59.560 43.478 0.31 0.00 43.82 3.86
2355 2541 1.801178 GAGCAAGTCAAGTTTCCTCGG 59.199 52.381 0.00 0.00 0.00 4.63
2356 2542 2.760374 AGAGCAAGTCAAGTTTCCTCG 58.240 47.619 0.00 0.00 0.00 4.63
2463 2650 5.379706 AGAGCTTTTGGCCTACTCATATT 57.620 39.130 3.32 0.00 43.05 1.28
2489 2676 9.632638 AAATGTACTTTATACATCAGAGGCATT 57.367 29.630 0.27 0.00 37.18 3.56
2540 2727 7.278868 CCAGAACACAAGATTGAGTAGGTAATC 59.721 40.741 0.00 0.00 31.74 1.75
2558 2755 3.059352 ACAGTTATGAGGCCAGAACAC 57.941 47.619 5.01 0.00 44.52 3.32
2574 2771 6.814954 AGTGATCAACCCTATTGATACAGT 57.185 37.500 0.00 3.81 39.08 3.55
2587 2784 6.127925 TGCTAATGACAATCAAGTGATCAACC 60.128 38.462 0.00 0.00 32.75 3.77
2763 2960 9.972106 TTTCAATAGCATTTTAATTGGGGAAAT 57.028 25.926 0.00 0.00 32.63 2.17
2857 3055 2.156917 TCCTCTGTTCGAACTCGCTTA 58.843 47.619 27.32 6.71 39.60 3.09
2971 3169 4.264668 TGAGGACCAACTCCCTTACAGATA 60.265 45.833 0.00 0.00 40.53 1.98
3031 3229 3.896648 TCAGTCTGAATGCGGTTTTTC 57.103 42.857 0.00 0.00 0.00 2.29
3037 3235 1.135859 GCAAGTTCAGTCTGAATGCGG 60.136 52.381 20.05 11.66 38.79 5.69
3040 3238 7.978414 TCTCTTATAGCAAGTTCAGTCTGAATG 59.022 37.037 18.08 13.92 38.79 2.67
3057 3255 9.315363 TCTAGCCCTTCCTAATTTCTCTTATAG 57.685 37.037 0.00 0.00 0.00 1.31
3153 3389 5.853572 AGGTACCCCTCAAAGTAATCAAA 57.146 39.130 8.74 0.00 35.62 2.69
3217 3453 8.462016 CAAGCCAATACTCTTGCTAGTTATTTT 58.538 33.333 0.00 0.00 34.12 1.82
3241 3477 4.024048 GCAAACTCTTACTGCTGCTAACAA 60.024 41.667 0.00 0.00 33.20 2.83
3274 3510 3.915346 AAATTGTTTCCTACTGGGGGT 57.085 42.857 0.00 0.00 35.33 4.95
3281 3517 4.456566 TCCAACCGCTAAATTGTTTCCTAC 59.543 41.667 0.00 0.00 0.00 3.18
3295 3531 1.577328 CGCAAAGTCATCCAACCGCT 61.577 55.000 0.00 0.00 0.00 5.52
3301 3537 0.817229 TGTGTGCGCAAAGTCATCCA 60.817 50.000 14.00 0.00 0.00 3.41
3314 3550 7.253618 CGGCATTACTTTTATTTACATGTGTGC 60.254 37.037 9.11 0.00 0.00 4.57
3416 3660 3.140325 TCCTGTCCTGAATGTTTGGTC 57.860 47.619 0.00 0.00 0.00 4.02
3436 3680 1.627329 CCGATGGTCCATCAGATCCAT 59.373 52.381 27.69 2.35 40.54 3.41
3492 3736 0.399075 AACCTTTGGTCCGTGGGTAG 59.601 55.000 0.77 0.00 33.12 3.18
3518 3762 7.101054 ACTTAAACCATGAGTAATGCGAACTA 58.899 34.615 0.00 0.00 34.67 2.24
3523 3767 7.303634 ACTAACTTAAACCATGAGTAATGCG 57.696 36.000 0.00 0.00 34.67 4.73
3733 3977 4.274214 TCAAAGTGTGATGAAGTGAAGCTG 59.726 41.667 0.00 0.00 0.00 4.24
3809 4053 0.670162 ACATGCACAACTGGTTGCTC 59.330 50.000 12.65 6.11 44.03 4.26
3923 4167 7.728847 AATCTACATTGCAAGCGTAATATGA 57.271 32.000 4.94 3.55 0.00 2.15
3991 4235 6.036083 CGTACAGATACACCCTTTTTCAGATG 59.964 42.308 0.00 0.00 0.00 2.90
4001 4245 2.758979 CCAGTTCGTACAGATACACCCT 59.241 50.000 0.00 0.00 0.00 4.34
4070 4314 2.198406 GTGCACTGTCTCACGTACAAA 58.802 47.619 10.32 0.00 0.00 2.83
4076 4320 0.947660 AGCATGTGCACTGTCTCACG 60.948 55.000 19.41 0.00 45.16 4.35
4080 4324 4.074259 TGATAAAAGCATGTGCACTGTCT 58.926 39.130 19.41 8.83 45.16 3.41
4103 4347 6.371389 CCGTTAAAGAAGACATGAAGAAACC 58.629 40.000 0.00 0.00 0.00 3.27
4155 4399 5.290643 TGCACTTCAAAATTCTCCAAAAACG 59.709 36.000 0.00 0.00 0.00 3.60
4223 4467 9.416284 ACGGGGAAATCAAATACAGTTTTATAT 57.584 29.630 0.00 0.00 0.00 0.86
4224 4468 8.679100 CACGGGGAAATCAAATACAGTTTTATA 58.321 33.333 0.00 0.00 0.00 0.98
4225 4469 7.543756 CACGGGGAAATCAAATACAGTTTTAT 58.456 34.615 0.00 0.00 0.00 1.40
4231 4475 2.752354 TGCACGGGGAAATCAAATACAG 59.248 45.455 0.00 0.00 0.00 2.74
4233 4477 2.752903 ACTGCACGGGGAAATCAAATAC 59.247 45.455 0.00 0.00 0.00 1.89
4244 4488 4.988598 AGCGAACACTGCACGGGG 62.989 66.667 0.00 0.00 33.85 5.73
4265 4509 9.581289 TCAGGTTATAAGAAATTGACAAGGAAA 57.419 29.630 0.00 0.00 0.00 3.13
4268 4512 8.335532 TGTCAGGTTATAAGAAATTGACAAGG 57.664 34.615 11.74 0.00 40.07 3.61
4278 4522 9.952030 TGTACAATCAATGTCAGGTTATAAGAA 57.048 29.630 0.00 0.00 42.70 2.52
4279 4523 9.599866 CTGTACAATCAATGTCAGGTTATAAGA 57.400 33.333 0.00 0.00 42.70 2.10
4280 4524 8.830580 CCTGTACAATCAATGTCAGGTTATAAG 58.169 37.037 0.00 0.00 44.15 1.73
4281 4525 8.544622 TCCTGTACAATCAATGTCAGGTTATAA 58.455 33.333 18.12 0.00 46.45 0.98
4288 4532 5.007430 GCTGATCCTGTACAATCAATGTCAG 59.993 44.000 10.63 10.79 42.70 3.51
4289 4533 4.877823 GCTGATCCTGTACAATCAATGTCA 59.122 41.667 10.63 2.48 42.70 3.58
4363 4607 4.861196 TCTAGCTCCTTCTCTGTACATGT 58.139 43.478 2.69 2.69 0.00 3.21
4464 4708 5.118286 GCCTGCCAACAATAAGCAATAATT 58.882 37.500 0.00 0.00 35.79 1.40
4501 4745 1.125847 GGCGACGCATTTTAAGCACG 61.126 55.000 23.09 0.00 35.60 5.34
4540 4784 8.175716 GGTAGACATACTGTAAAATCAGCAAAC 58.824 37.037 0.00 0.00 38.84 2.93
4555 4799 5.867716 CGTAAACAGCAAAGGTAGACATACT 59.132 40.000 0.00 0.00 32.12 2.12
4596 4840 3.368427 CGGCATCTCTGAAGAACAGGTAA 60.368 47.826 0.00 0.00 45.76 2.85
4617 4861 0.243907 AGACAGATCAACCGTCCACG 59.756 55.000 0.00 0.00 39.44 4.94
4618 4862 2.288825 TGAAGACAGATCAACCGTCCAC 60.289 50.000 0.00 0.00 0.00 4.02
4619 4863 1.967779 TGAAGACAGATCAACCGTCCA 59.032 47.619 0.00 0.00 0.00 4.02
4620 4864 2.028930 AGTGAAGACAGATCAACCGTCC 60.029 50.000 0.00 0.00 0.00 4.79
4623 4867 3.032017 ACAGTGAAGACAGATCAACCG 57.968 47.619 0.00 0.00 0.00 4.44
4781 5084 4.225942 ACAAGAAAGTATGGCATCTCTCCA 59.774 41.667 1.65 0.00 38.09 3.86
4815 5118 5.637006 TGCGCCTGATTGTACTTTTAATT 57.363 34.783 4.18 0.00 0.00 1.40
4833 5136 2.225491 TGTTCCTACATTGAACTTGCGC 59.775 45.455 0.00 0.00 42.04 6.09
4909 5212 0.377554 TGCACGTAAACAACCCGTTG 59.622 50.000 6.03 6.03 45.58 4.10
4912 5215 1.533731 AGAATGCACGTAAACAACCCG 59.466 47.619 0.00 0.00 0.00 5.28
4954 5257 3.071023 TGAAGAAGCGATATTACCCCCTG 59.929 47.826 0.00 0.00 0.00 4.45
4989 5292 5.618640 GCCATGTCTCAGAAAAGTAAAGCTG 60.619 44.000 0.00 0.00 0.00 4.24
5041 5344 0.179936 AGGTTCTCCATAGCAGCTGC 59.820 55.000 31.53 31.53 37.49 5.25
5179 5482 1.131504 GTCAACAAACCGACAAGCACA 59.868 47.619 0.00 0.00 32.24 4.57
5218 5521 8.592809 TGCTGGGTTCATGTAAAAGAAAAATAT 58.407 29.630 0.00 0.00 0.00 1.28
5219 5522 7.957002 TGCTGGGTTCATGTAAAAGAAAAATA 58.043 30.769 0.00 0.00 0.00 1.40
5220 5523 6.825610 TGCTGGGTTCATGTAAAAGAAAAAT 58.174 32.000 0.00 0.00 0.00 1.82
5221 5524 6.227298 TGCTGGGTTCATGTAAAAGAAAAA 57.773 33.333 0.00 0.00 0.00 1.94
5224 5527 6.222389 CAATTGCTGGGTTCATGTAAAAGAA 58.778 36.000 0.00 0.00 0.00 2.52
5226 5529 4.931002 CCAATTGCTGGGTTCATGTAAAAG 59.069 41.667 0.00 0.00 42.17 2.27
5445 5750 9.929180 CCTGGTTCTCATATATTTCGATAAAGA 57.071 33.333 0.00 0.00 0.00 2.52
5456 5761 4.262808 GCACAGCTCCTGGTTCTCATATAT 60.263 45.833 0.00 0.00 35.51 0.86
5459 5764 1.208052 GCACAGCTCCTGGTTCTCATA 59.792 52.381 0.00 0.00 35.51 2.15
5506 5811 6.704310 TCCTAGGCGATGGGTAAATAAATAC 58.296 40.000 2.96 0.00 0.00 1.89
5535 7092 4.758674 TCCTGCTGAAATCTGAAAACAGAG 59.241 41.667 0.00 0.00 34.35 3.35
5545 7102 7.508636 TCTGAGATACTATTCCTGCTGAAATCT 59.491 37.037 0.00 0.00 36.33 2.40
5552 7109 6.154877 CCATCATCTGAGATACTATTCCTGCT 59.845 42.308 0.00 0.00 0.00 4.24
5582 7139 2.482374 GCGTGGCACAAGATCTGC 59.518 61.111 19.09 7.06 44.16 4.26
5583 7140 1.672030 TGGCGTGGCACAAGATCTG 60.672 57.895 19.09 0.00 44.16 2.90
5584 7141 1.672356 GTGGCGTGGCACAAGATCT 60.672 57.895 20.16 0.00 44.16 2.75
5585 7142 2.690778 GGTGGCGTGGCACAAGATC 61.691 63.158 25.10 6.46 44.16 2.75
5586 7143 2.672996 GGTGGCGTGGCACAAGAT 60.673 61.111 25.10 0.00 44.16 2.40
5587 7144 4.182433 TGGTGGCGTGGCACAAGA 62.182 61.111 25.10 8.20 44.16 3.02
5588 7145 3.663176 CTGGTGGCGTGGCACAAG 61.663 66.667 25.10 20.48 44.16 3.16
5594 7151 3.014085 ATACGACCTGGTGGCGTGG 62.014 63.158 20.03 0.00 42.64 4.94
5595 7152 1.809619 CATACGACCTGGTGGCGTG 60.810 63.158 20.03 10.70 42.64 5.34
5596 7153 1.537814 TTCATACGACCTGGTGGCGT 61.538 55.000 16.35 16.35 44.04 5.68
5597 7154 0.390603 TTTCATACGACCTGGTGGCG 60.391 55.000 2.82 5.04 38.30 5.69
5598 7155 1.084289 GTTTCATACGACCTGGTGGC 58.916 55.000 2.82 0.00 36.63 5.01
5599 7156 2.346803 CAGTTTCATACGACCTGGTGG 58.653 52.381 2.82 5.46 39.83 4.61
5600 7157 2.346803 CCAGTTTCATACGACCTGGTG 58.653 52.381 2.82 0.00 36.44 4.17
5601 7158 1.338769 GCCAGTTTCATACGACCTGGT 60.339 52.381 0.00 0.00 40.43 4.00
5602 7159 1.338674 TGCCAGTTTCATACGACCTGG 60.339 52.381 0.00 0.00 40.91 4.45
5603 7160 2.093306 TGCCAGTTTCATACGACCTG 57.907 50.000 0.00 0.00 0.00 4.00
5604 7161 2.632377 CATGCCAGTTTCATACGACCT 58.368 47.619 0.00 0.00 0.00 3.85
5605 7162 1.064060 GCATGCCAGTTTCATACGACC 59.936 52.381 6.36 0.00 0.00 4.79
5606 7163 1.737236 TGCATGCCAGTTTCATACGAC 59.263 47.619 16.68 0.00 0.00 4.34
5607 7164 2.106477 TGCATGCCAGTTTCATACGA 57.894 45.000 16.68 0.00 0.00 3.43
5608 7165 2.287188 GGATGCATGCCAGTTTCATACG 60.287 50.000 16.68 0.00 0.00 3.06
5609 7166 2.954318 AGGATGCATGCCAGTTTCATAC 59.046 45.455 16.68 0.03 0.00 2.39
5610 7167 2.953648 CAGGATGCATGCCAGTTTCATA 59.046 45.455 16.68 0.00 0.00 2.15
5611 7168 1.754803 CAGGATGCATGCCAGTTTCAT 59.245 47.619 16.68 0.00 0.00 2.57
5612 7169 1.179152 CAGGATGCATGCCAGTTTCA 58.821 50.000 16.68 0.00 0.00 2.69
5613 7170 0.458669 CCAGGATGCATGCCAGTTTC 59.541 55.000 16.68 4.30 31.97 2.78
5614 7171 1.610554 GCCAGGATGCATGCCAGTTT 61.611 55.000 16.68 0.00 31.97 2.66
5615 7172 2.056223 GCCAGGATGCATGCCAGTT 61.056 57.895 16.68 0.00 31.97 3.16
5616 7173 2.441532 GCCAGGATGCATGCCAGT 60.442 61.111 16.68 0.38 31.97 4.00
5617 7174 2.123854 AGCCAGGATGCATGCCAG 60.124 61.111 16.68 7.64 31.97 4.85
5618 7175 2.124024 GAGCCAGGATGCATGCCA 60.124 61.111 16.68 3.52 31.97 4.92
5619 7176 2.910994 GGAGCCAGGATGCATGCC 60.911 66.667 16.68 10.55 31.97 4.40
5620 7177 2.910994 GGGAGCCAGGATGCATGC 60.911 66.667 11.82 11.82 31.97 4.06
5621 7178 2.593725 CGGGAGCCAGGATGCATG 60.594 66.667 2.46 0.00 31.97 4.06
5622 7179 3.882326 CCGGGAGCCAGGATGCAT 61.882 66.667 0.00 0.00 31.97 3.96
5625 7182 2.946988 TAGTCCCGGGAGCCAGGATG 62.947 65.000 27.72 0.00 30.92 3.51
5626 7183 2.037304 ATAGTCCCGGGAGCCAGGAT 62.037 60.000 27.72 8.18 30.92 3.24
5627 7184 2.252012 AATAGTCCCGGGAGCCAGGA 62.252 60.000 27.72 5.85 0.00 3.86
5628 7185 1.345715 AAATAGTCCCGGGAGCCAGG 61.346 60.000 27.72 0.00 0.00 4.45
5629 7186 0.106894 GAAATAGTCCCGGGAGCCAG 59.893 60.000 27.72 0.00 0.00 4.85
5630 7187 0.619255 TGAAATAGTCCCGGGAGCCA 60.619 55.000 27.72 12.77 0.00 4.75
5631 7188 0.765510 ATGAAATAGTCCCGGGAGCC 59.234 55.000 27.72 14.18 0.00 4.70
5632 7189 3.320673 CTATGAAATAGTCCCGGGAGC 57.679 52.381 27.72 19.05 42.02 4.70
5644 7201 9.807649 GGAGAAATTGTTGCAATACTATGAAAT 57.192 29.630 0.59 0.00 0.00 2.17
5645 7202 8.250332 GGGAGAAATTGTTGCAATACTATGAAA 58.750 33.333 0.59 0.00 0.00 2.69
5646 7203 7.395772 TGGGAGAAATTGTTGCAATACTATGAA 59.604 33.333 0.59 0.00 0.00 2.57
5647 7204 6.889177 TGGGAGAAATTGTTGCAATACTATGA 59.111 34.615 0.59 0.00 0.00 2.15
5648 7205 6.974622 GTGGGAGAAATTGTTGCAATACTATG 59.025 38.462 0.59 0.00 0.00 2.23
5649 7206 6.891908 AGTGGGAGAAATTGTTGCAATACTAT 59.108 34.615 0.59 0.00 0.00 2.12
5650 7207 6.245408 AGTGGGAGAAATTGTTGCAATACTA 58.755 36.000 0.59 0.00 0.00 1.82
5651 7208 5.079643 AGTGGGAGAAATTGTTGCAATACT 58.920 37.500 0.59 0.00 0.00 2.12
5652 7209 5.391312 AGTGGGAGAAATTGTTGCAATAC 57.609 39.130 0.59 0.00 0.00 1.89
5653 7210 4.462483 GGAGTGGGAGAAATTGTTGCAATA 59.538 41.667 0.59 0.00 0.00 1.90
5654 7211 3.259123 GGAGTGGGAGAAATTGTTGCAAT 59.741 43.478 0.59 0.00 0.00 3.56
5655 7212 2.627699 GGAGTGGGAGAAATTGTTGCAA 59.372 45.455 0.00 0.00 0.00 4.08
5656 7213 2.158475 AGGAGTGGGAGAAATTGTTGCA 60.158 45.455 0.00 0.00 0.00 4.08
5657 7214 2.489722 GAGGAGTGGGAGAAATTGTTGC 59.510 50.000 0.00 0.00 0.00 4.17
5658 7215 3.754965 TGAGGAGTGGGAGAAATTGTTG 58.245 45.455 0.00 0.00 0.00 3.33
5659 7216 4.453480 TTGAGGAGTGGGAGAAATTGTT 57.547 40.909 0.00 0.00 0.00 2.83
5660 7217 4.453480 TTTGAGGAGTGGGAGAAATTGT 57.547 40.909 0.00 0.00 0.00 2.71
5661 7218 4.021981 GGTTTTGAGGAGTGGGAGAAATTG 60.022 45.833 0.00 0.00 0.00 2.32
5662 7219 4.152647 GGTTTTGAGGAGTGGGAGAAATT 58.847 43.478 0.00 0.00 0.00 1.82
5663 7220 3.500471 GGGTTTTGAGGAGTGGGAGAAAT 60.500 47.826 0.00 0.00 0.00 2.17
5664 7221 2.158519 GGGTTTTGAGGAGTGGGAGAAA 60.159 50.000 0.00 0.00 0.00 2.52
5665 7222 1.423921 GGGTTTTGAGGAGTGGGAGAA 59.576 52.381 0.00 0.00 0.00 2.87
5666 7223 1.064825 GGGTTTTGAGGAGTGGGAGA 58.935 55.000 0.00 0.00 0.00 3.71
5667 7224 1.068121 AGGGTTTTGAGGAGTGGGAG 58.932 55.000 0.00 0.00 0.00 4.30
5668 7225 2.426431 TAGGGTTTTGAGGAGTGGGA 57.574 50.000 0.00 0.00 0.00 4.37
5669 7226 3.421844 CTTTAGGGTTTTGAGGAGTGGG 58.578 50.000 0.00 0.00 0.00 4.61
5670 7227 3.073946 TCCTTTAGGGTTTTGAGGAGTGG 59.926 47.826 0.00 0.00 32.91 4.00
5671 7228 4.367039 TCCTTTAGGGTTTTGAGGAGTG 57.633 45.455 0.00 0.00 32.91 3.51
5672 7229 4.447325 GGTTCCTTTAGGGTTTTGAGGAGT 60.447 45.833 0.00 0.00 37.76 3.85
5673 7230 4.079970 GGTTCCTTTAGGGTTTTGAGGAG 58.920 47.826 0.00 0.00 37.76 3.69
5674 7231 3.497227 CGGTTCCTTTAGGGTTTTGAGGA 60.497 47.826 0.00 0.00 34.83 3.71
5675 7232 2.817844 CGGTTCCTTTAGGGTTTTGAGG 59.182 50.000 0.00 0.00 36.25 3.86
5676 7233 3.746940 TCGGTTCCTTTAGGGTTTTGAG 58.253 45.455 0.00 0.00 36.25 3.02
5677 7234 3.136992 ACTCGGTTCCTTTAGGGTTTTGA 59.863 43.478 0.00 0.00 36.25 2.69
5678 7235 3.483421 ACTCGGTTCCTTTAGGGTTTTG 58.517 45.455 0.00 0.00 36.25 2.44
5679 7236 3.870538 ACTCGGTTCCTTTAGGGTTTT 57.129 42.857 0.00 0.00 36.25 2.43
5680 7237 3.136992 TCAACTCGGTTCCTTTAGGGTTT 59.863 43.478 0.00 0.00 36.25 3.27
5681 7238 2.707257 TCAACTCGGTTCCTTTAGGGTT 59.293 45.455 0.00 0.00 36.25 4.11
5682 7239 2.038164 GTCAACTCGGTTCCTTTAGGGT 59.962 50.000 0.00 0.00 36.25 4.34
5683 7240 2.696506 GTCAACTCGGTTCCTTTAGGG 58.303 52.381 0.00 0.00 35.41 3.53
5684 7241 2.334838 CGTCAACTCGGTTCCTTTAGG 58.665 52.381 0.00 0.00 0.00 2.69
5685 7242 1.725164 GCGTCAACTCGGTTCCTTTAG 59.275 52.381 0.00 0.00 0.00 1.85
5686 7243 1.342174 AGCGTCAACTCGGTTCCTTTA 59.658 47.619 0.00 0.00 38.37 1.85
5687 7244 0.106149 AGCGTCAACTCGGTTCCTTT 59.894 50.000 0.00 0.00 38.37 3.11
5688 7245 0.319641 GAGCGTCAACTCGGTTCCTT 60.320 55.000 0.00 0.00 41.54 3.36
5689 7246 1.289380 GAGCGTCAACTCGGTTCCT 59.711 57.895 0.00 0.00 41.54 3.36
5690 7247 1.737008 GGAGCGTCAACTCGGTTCC 60.737 63.158 0.00 0.00 41.54 3.62
5691 7248 1.737008 GGGAGCGTCAACTCGGTTC 60.737 63.158 0.00 0.00 41.54 3.62
5692 7249 2.342648 GGGAGCGTCAACTCGGTT 59.657 61.111 0.00 0.00 41.54 4.44
5693 7250 4.052229 CGGGAGCGTCAACTCGGT 62.052 66.667 0.00 0.00 44.09 4.69
5705 7262 2.074576 CTCATGCTATTGATGCGGGAG 58.925 52.381 0.00 0.00 0.00 4.30
5706 7263 1.417517 ACTCATGCTATTGATGCGGGA 59.582 47.619 0.00 0.00 0.00 5.14
5707 7264 1.888215 ACTCATGCTATTGATGCGGG 58.112 50.000 0.00 0.00 0.00 6.13
5708 7265 3.657634 ACTACTCATGCTATTGATGCGG 58.342 45.455 0.00 0.00 0.00 5.69
5709 7266 4.746611 TCAACTACTCATGCTATTGATGCG 59.253 41.667 0.00 0.00 0.00 4.73
5710 7267 6.609237 TTCAACTACTCATGCTATTGATGC 57.391 37.500 0.00 0.00 0.00 3.91
5711 7268 6.259387 TGCTTCAACTACTCATGCTATTGATG 59.741 38.462 0.00 0.00 0.00 3.07
5712 7269 6.351711 TGCTTCAACTACTCATGCTATTGAT 58.648 36.000 0.00 0.00 0.00 2.57
5713 7270 5.733676 TGCTTCAACTACTCATGCTATTGA 58.266 37.500 0.00 0.00 0.00 2.57
5714 7271 6.093219 ACTTGCTTCAACTACTCATGCTATTG 59.907 38.462 0.00 0.00 0.00 1.90
5715 7272 6.093219 CACTTGCTTCAACTACTCATGCTATT 59.907 38.462 0.00 0.00 0.00 1.73
5716 7273 5.583854 CACTTGCTTCAACTACTCATGCTAT 59.416 40.000 0.00 0.00 0.00 2.97
5717 7274 4.931601 CACTTGCTTCAACTACTCATGCTA 59.068 41.667 0.00 0.00 0.00 3.49
5718 7275 3.750130 CACTTGCTTCAACTACTCATGCT 59.250 43.478 0.00 0.00 0.00 3.79
5719 7276 3.748048 TCACTTGCTTCAACTACTCATGC 59.252 43.478 0.00 0.00 0.00 4.06
5720 7277 5.929697 TTCACTTGCTTCAACTACTCATG 57.070 39.130 0.00 0.00 0.00 3.07
5721 7278 6.233434 TCATTCACTTGCTTCAACTACTCAT 58.767 36.000 0.00 0.00 0.00 2.90
5722 7279 5.610398 TCATTCACTTGCTTCAACTACTCA 58.390 37.500 0.00 0.00 0.00 3.41
5723 7280 6.734104 ATCATTCACTTGCTTCAACTACTC 57.266 37.500 0.00 0.00 0.00 2.59
5724 7281 7.229306 TCAAATCATTCACTTGCTTCAACTACT 59.771 33.333 0.00 0.00 0.00 2.57
5725 7282 7.362662 TCAAATCATTCACTTGCTTCAACTAC 58.637 34.615 0.00 0.00 0.00 2.73
5726 7283 7.509141 TCAAATCATTCACTTGCTTCAACTA 57.491 32.000 0.00 0.00 0.00 2.24
5727 7284 6.395426 TCAAATCATTCACTTGCTTCAACT 57.605 33.333 0.00 0.00 0.00 3.16
5728 7285 7.467557 TTTCAAATCATTCACTTGCTTCAAC 57.532 32.000 0.00 0.00 0.00 3.18
5729 7286 8.665643 AATTTCAAATCATTCACTTGCTTCAA 57.334 26.923 0.00 0.00 0.00 2.69
5730 7287 7.927092 TGAATTTCAAATCATTCACTTGCTTCA 59.073 29.630 0.00 0.00 35.02 3.02
5731 7288 8.301730 TGAATTTCAAATCATTCACTTGCTTC 57.698 30.769 0.00 0.00 35.02 3.86
5732 7289 8.665643 TTGAATTTCAAATCATTCACTTGCTT 57.334 26.923 9.36 0.00 38.78 3.91
5733 7290 7.929785 ACTTGAATTTCAAATCATTCACTTGCT 59.070 29.630 12.62 0.00 38.78 3.91
5734 7291 8.080083 ACTTGAATTTCAAATCATTCACTTGC 57.920 30.769 12.62 0.00 38.78 4.01
5738 7295 9.654417 CCAAAACTTGAATTTCAAATCATTCAC 57.346 29.630 12.62 0.00 38.78 3.18
5739 7296 8.838365 CCCAAAACTTGAATTTCAAATCATTCA 58.162 29.630 12.62 0.00 35.73 2.57
5740 7297 7.804600 GCCCAAAACTTGAATTTCAAATCATTC 59.195 33.333 12.62 0.00 35.73 2.67
5741 7298 7.503230 AGCCCAAAACTTGAATTTCAAATCATT 59.497 29.630 12.62 4.00 35.73 2.57
5742 7299 6.999871 AGCCCAAAACTTGAATTTCAAATCAT 59.000 30.769 12.62 0.00 35.73 2.45
5743 7300 6.355747 AGCCCAAAACTTGAATTTCAAATCA 58.644 32.000 12.62 0.00 35.73 2.57
5744 7301 6.866010 AGCCCAAAACTTGAATTTCAAATC 57.134 33.333 12.62 0.00 35.73 2.17
5745 7302 7.643569 AAAGCCCAAAACTTGAATTTCAAAT 57.356 28.000 12.62 0.11 35.73 2.32
5746 7303 7.311408 CAAAAGCCCAAAACTTGAATTTCAAA 58.689 30.769 12.62 0.00 35.73 2.69
5747 7304 6.127786 CCAAAAGCCCAAAACTTGAATTTCAA 60.128 34.615 11.19 11.19 34.79 2.69
5748 7305 5.356470 CCAAAAGCCCAAAACTTGAATTTCA 59.644 36.000 0.00 0.00 0.00 2.69
5749 7306 5.588246 TCCAAAAGCCCAAAACTTGAATTTC 59.412 36.000 0.00 0.00 0.00 2.17
5750 7307 5.356751 GTCCAAAAGCCCAAAACTTGAATTT 59.643 36.000 0.00 0.00 0.00 1.82
5751 7308 4.881273 GTCCAAAAGCCCAAAACTTGAATT 59.119 37.500 0.00 0.00 0.00 2.17
5752 7309 4.080638 TGTCCAAAAGCCCAAAACTTGAAT 60.081 37.500 0.00 0.00 0.00 2.57
5753 7310 3.261897 TGTCCAAAAGCCCAAAACTTGAA 59.738 39.130 0.00 0.00 0.00 2.69
5754 7311 2.834549 TGTCCAAAAGCCCAAAACTTGA 59.165 40.909 0.00 0.00 0.00 3.02
5755 7312 3.258971 TGTCCAAAAGCCCAAAACTTG 57.741 42.857 0.00 0.00 0.00 3.16
5756 7313 3.807553 CATGTCCAAAAGCCCAAAACTT 58.192 40.909 0.00 0.00 0.00 2.66
5775 7332 1.479323 AGAAAGATTGCGCAATGGCAT 59.521 42.857 38.34 21.29 43.52 4.40
5820 7377 1.879380 CCGAAACAGTCAGGATTGCAA 59.121 47.619 0.00 0.00 0.00 4.08
5824 7381 0.320374 TCGCCGAAACAGTCAGGATT 59.680 50.000 0.00 0.00 0.00 3.01
5852 7409 2.432146 GAGTGATGTGACCAGCCATCTA 59.568 50.000 0.00 0.00 38.59 1.98
5853 7410 1.209019 GAGTGATGTGACCAGCCATCT 59.791 52.381 0.00 0.00 38.59 2.90
5854 7411 1.065926 TGAGTGATGTGACCAGCCATC 60.066 52.381 0.00 0.00 38.34 3.51
5855 7412 0.986527 TGAGTGATGTGACCAGCCAT 59.013 50.000 0.00 0.00 0.00 4.40
5856 7413 0.035317 GTGAGTGATGTGACCAGCCA 59.965 55.000 0.00 0.00 0.00 4.75
5857 7414 0.322975 AGTGAGTGATGTGACCAGCC 59.677 55.000 0.00 0.00 0.00 4.85
5858 7415 1.274728 AGAGTGAGTGATGTGACCAGC 59.725 52.381 0.00 0.00 0.00 4.85
5861 7418 2.488545 ACGTAGAGTGAGTGATGTGACC 59.511 50.000 0.00 0.00 0.00 4.02
5863 7420 3.818773 TCAACGTAGAGTGAGTGATGTGA 59.181 43.478 0.00 0.00 0.00 3.58
5865 7422 4.547532 GTTCAACGTAGAGTGAGTGATGT 58.452 43.478 0.00 0.00 0.00 3.06
5866 7423 3.604198 CGTTCAACGTAGAGTGAGTGATG 59.396 47.826 0.39 0.00 36.74 3.07
5867 7424 3.501062 TCGTTCAACGTAGAGTGAGTGAT 59.499 43.478 10.31 0.00 43.14 3.06
5868 7425 2.874086 TCGTTCAACGTAGAGTGAGTGA 59.126 45.455 10.31 0.00 43.14 3.41
5869 7426 3.263602 TCGTTCAACGTAGAGTGAGTG 57.736 47.619 10.31 0.00 43.14 3.51
5870 7427 3.976793 TTCGTTCAACGTAGAGTGAGT 57.023 42.857 10.31 0.00 43.14 3.41
5873 7430 5.824243 ATCTTTTCGTTCAACGTAGAGTG 57.176 39.130 10.31 0.00 43.14 3.51
5875 7432 6.308282 AGCTTATCTTTTCGTTCAACGTAGAG 59.692 38.462 10.31 5.26 43.14 2.43
5880 7437 5.264060 TCAGCTTATCTTTTCGTTCAACG 57.736 39.130 2.64 2.64 44.19 4.10
5882 7439 6.262273 ACCTTTCAGCTTATCTTTTCGTTCAA 59.738 34.615 0.00 0.00 0.00 2.69
5884 7441 6.080406 CACCTTTCAGCTTATCTTTTCGTTC 58.920 40.000 0.00 0.00 0.00 3.95
5885 7442 5.562890 GCACCTTTCAGCTTATCTTTTCGTT 60.563 40.000 0.00 0.00 0.00 3.85
5887 7444 4.083324 TGCACCTTTCAGCTTATCTTTTCG 60.083 41.667 0.00 0.00 0.00 3.46
5889 7446 5.337009 CCATGCACCTTTCAGCTTATCTTTT 60.337 40.000 0.00 0.00 0.00 2.27
5890 7447 4.159135 CCATGCACCTTTCAGCTTATCTTT 59.841 41.667 0.00 0.00 0.00 2.52
5891 7448 3.698040 CCATGCACCTTTCAGCTTATCTT 59.302 43.478 0.00 0.00 0.00 2.40
5893 7450 3.019564 ACCATGCACCTTTCAGCTTATC 58.980 45.455 0.00 0.00 0.00 1.75
5894 7451 3.091633 ACCATGCACCTTTCAGCTTAT 57.908 42.857 0.00 0.00 0.00 1.73
5895 7452 2.584835 ACCATGCACCTTTCAGCTTA 57.415 45.000 0.00 0.00 0.00 3.09
5896 7453 2.162681 GTACCATGCACCTTTCAGCTT 58.837 47.619 0.00 0.00 0.00 3.74
5897 7454 1.826385 GTACCATGCACCTTTCAGCT 58.174 50.000 0.00 0.00 0.00 4.24
5898 7455 0.447801 CGTACCATGCACCTTTCAGC 59.552 55.000 0.00 0.00 0.00 4.26
5899 7456 2.093306 TCGTACCATGCACCTTTCAG 57.907 50.000 0.00 0.00 0.00 3.02
5900 7457 2.147958 GTTCGTACCATGCACCTTTCA 58.852 47.619 0.00 0.00 0.00 2.69
5901 7458 2.147958 TGTTCGTACCATGCACCTTTC 58.852 47.619 0.00 0.00 0.00 2.62
5903 7460 1.071699 ACTGTTCGTACCATGCACCTT 59.928 47.619 0.00 0.00 0.00 3.50
5904 7461 0.685097 ACTGTTCGTACCATGCACCT 59.315 50.000 0.00 0.00 0.00 4.00
5905 7462 0.796312 CACTGTTCGTACCATGCACC 59.204 55.000 0.00 0.00 0.00 5.01
5906 7463 0.796312 CCACTGTTCGTACCATGCAC 59.204 55.000 0.00 0.00 0.00 4.57
5908 7465 1.803334 TTCCACTGTTCGTACCATGC 58.197 50.000 0.00 0.00 0.00 4.06
5910 7467 3.070446 TCTGTTTCCACTGTTCGTACCAT 59.930 43.478 0.00 0.00 0.00 3.55
5912 7469 3.102052 TCTGTTTCCACTGTTCGTACC 57.898 47.619 0.00 0.00 0.00 3.34
5914 7471 4.594123 TCATCTGTTTCCACTGTTCGTA 57.406 40.909 0.00 0.00 0.00 3.43
5915 7472 3.469008 TCATCTGTTTCCACTGTTCGT 57.531 42.857 0.00 0.00 0.00 3.85
5917 7474 5.296780 TGAAGTTCATCTGTTTCCACTGTTC 59.703 40.000 0.08 0.00 0.00 3.18
5919 7476 4.780815 TGAAGTTCATCTGTTTCCACTGT 58.219 39.130 0.08 0.00 0.00 3.55
5921 7478 5.888161 AGTTTGAAGTTCATCTGTTTCCACT 59.112 36.000 6.36 0.00 0.00 4.00
5922 7479 6.136541 AGTTTGAAGTTCATCTGTTTCCAC 57.863 37.500 6.36 0.00 0.00 4.02
5923 7480 9.739276 ATATAGTTTGAAGTTCATCTGTTTCCA 57.261 29.630 6.36 0.00 0.00 3.53
5956 8865 9.083422 CGGAGACATATTCATATGGGATATAGT 57.917 37.037 10.83 8.20 43.38 2.12
5957 8866 8.526978 CCGGAGACATATTCATATGGGATATAG 58.473 40.741 0.00 5.73 43.38 1.31
5958 8867 8.231709 TCCGGAGACATATTCATATGGGATATA 58.768 37.037 0.00 0.00 43.38 0.86
5959 8868 7.075797 TCCGGAGACATATTCATATGGGATAT 58.924 38.462 0.00 5.01 43.38 1.63
5960 8869 6.440354 TCCGGAGACATATTCATATGGGATA 58.560 40.000 0.00 2.84 43.38 2.59
5961 8870 5.280499 TCCGGAGACATATTCATATGGGAT 58.720 41.667 0.00 0.57 43.38 3.85
5996 8920 9.039165 AGGGCAAGTATTAGTAGTTTTAGTACA 57.961 33.333 0.00 0.00 0.00 2.90
6002 8926 6.820152 CCGTTAGGGCAAGTATTAGTAGTTTT 59.180 38.462 0.00 0.00 0.00 2.43
6079 9003 9.487790 CCTAGAGAATAGATTTTTCAGATGGTC 57.512 37.037 0.00 0.00 0.00 4.02
6089 9013 6.209788 CGGTAGGAGCCTAGAGAATAGATTTT 59.790 42.308 0.00 0.00 0.00 1.82
6115 9039 0.681564 AGGTAGAGCTGTGAGACCCG 60.682 60.000 0.00 0.00 0.00 5.28
6185 9109 4.011046 CAACAAGTTGGCGTTGGC 57.989 55.556 7.96 0.00 39.05 4.52
6248 9334 2.523902 CAAGTTGGCCCCCAGCAA 60.524 61.111 0.00 0.00 46.50 3.91
6277 9363 2.270257 GCAGCAGCATTCACACCCA 61.270 57.895 0.00 0.00 41.58 4.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.