Multiple sequence alignment - TraesCS7A01G569900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G569900 chr7A 100.000 5716 0 0 1 5716 736693725 736688010 0.000000e+00 10556.0
1 TraesCS7A01G569900 chr7A 98.413 126 2 0 5591 5716 736680627 736680502 7.450000e-54 222.0
2 TraesCS7A01G569900 chr7A 90.400 125 11 1 5591 5714 629890717 629890593 4.580000e-36 163.0
3 TraesCS7A01G569900 chr7D 94.803 5580 180 42 110 5590 631683992 631689560 0.000000e+00 8597.0
4 TraesCS7A01G569900 chr7D 80.057 707 134 7 1820 2522 631685452 631686155 8.490000e-143 518.0
5 TraesCS7A01G569900 chr7D 79.774 707 136 7 1532 2235 631685740 631686442 1.840000e-139 507.0
6 TraesCS7A01G569900 chr7D 93.578 109 6 1 5354 5462 631662674 631662781 1.650000e-35 161.0
7 TraesCS7A01G569900 chr7D 98.507 67 1 0 1 67 631683927 631683993 1.010000e-22 119.0
8 TraesCS7A01G569900 chr2B 78.877 2902 565 33 1833 4709 6058626 6055748 0.000000e+00 1919.0
9 TraesCS7A01G569900 chr2B 78.279 2219 444 32 2023 4224 6039620 6037423 0.000000e+00 1393.0
10 TraesCS7A01G569900 chr2B 78.315 2172 433 35 2070 4224 6139235 6137085 0.000000e+00 1367.0
11 TraesCS7A01G569900 chr2B 75.393 764 163 21 1328 2080 6139542 6138793 4.240000e-91 346.0
12 TraesCS7A01G569900 chr2B 75.758 594 132 12 1781 2368 6139380 6138793 7.250000e-74 289.0
13 TraesCS7A01G569900 chr2B 72.163 467 105 18 1638 2092 6058389 6057936 1.010000e-22 119.0
14 TraesCS7A01G569900 chr4B 79.331 2482 468 43 1763 4223 6039629 6042086 0.000000e+00 1700.0
15 TraesCS7A01G569900 chr4B 78.724 2383 460 39 1864 4225 6056546 6058902 0.000000e+00 1548.0
16 TraesCS7A01G569900 chr4B 74.807 1294 294 29 1088 2368 6055919 6057193 6.470000e-154 555.0
17 TraesCS7A01G569900 chr4B 72.961 662 162 15 1576 2229 6056546 6057198 1.250000e-51 215.0
18 TraesCS7A01G569900 chr2D 79.027 2508 465 51 2315 4797 2342127 2344598 0.000000e+00 1661.0
19 TraesCS7A01G569900 chr2D 75.405 3212 685 84 1623 4797 12774501 12771358 0.000000e+00 1458.0
20 TraesCS7A01G569900 chr2D 78.131 2172 437 36 2070 4224 5389491 5391641 0.000000e+00 1345.0
21 TraesCS7A01G569900 chr2D 94.444 126 7 0 5591 5716 215818992 215818867 1.630000e-45 195.0
22 TraesCS7A01G569900 chr2D 74.021 485 114 12 1618 2097 5395262 5395739 2.720000e-43 187.0
23 TraesCS7A01G569900 chr2D 85.616 146 15 5 5571 5714 207155254 207155113 1.280000e-31 148.0
24 TraesCS7A01G569900 chr3B 79.221 2464 453 48 2315 4750 52892617 52890185 0.000000e+00 1659.0
25 TraesCS7A01G569900 chr3B 95.238 126 6 0 5591 5716 404843747 404843872 3.490000e-47 200.0
26 TraesCS7A01G569900 chr2A 79.025 2503 463 51 2315 4797 2334736 2337196 0.000000e+00 1657.0
27 TraesCS7A01G569900 chr2A 76.508 2950 619 62 1819 4742 3975551 3978452 0.000000e+00 1541.0
28 TraesCS7A01G569900 chr2A 75.589 3056 671 63 1623 4647 14921345 14918334 0.000000e+00 1441.0
29 TraesCS7A01G569900 chr2A 78.845 2113 413 32 2127 4224 4038516 4040609 0.000000e+00 1395.0
30 TraesCS7A01G569900 chr2A 74.967 759 175 13 1328 2080 4038152 4038901 9.180000e-88 335.0
31 TraesCS7A01G569900 chrUn 97.589 871 19 2 2056 2926 93444326 93443458 0.000000e+00 1491.0
32 TraesCS7A01G569900 chrUn 95.378 649 24 4 4134 4778 93440015 93439369 0.000000e+00 1027.0
33 TraesCS7A01G569900 chrUn 87.786 131 14 2 5585 5713 108625519 108625649 9.920000e-33 152.0
34 TraesCS7A01G569900 chr1D 89.600 125 12 1 5591 5714 472025216 472025340 2.130000e-34 158.0
35 TraesCS7A01G569900 chr5D 88.976 127 13 1 5591 5716 365707655 365707781 7.670000e-34 156.0
36 TraesCS7A01G569900 chr5D 94.595 37 2 0 679 715 285543087 285543123 2.220000e-04 58.4
37 TraesCS7A01G569900 chr1B 87.970 133 10 5 5587 5716 225900643 225900514 9.920000e-33 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G569900 chr7A 736688010 736693725 5715 True 10556.000000 10556 100.000000 1 5716 1 chr7A.!!$R3 5715
1 TraesCS7A01G569900 chr7D 631683927 631689560 5633 False 4358.000000 8597 96.655000 1 5590 2 chr7D.!!$F2 5589
2 TraesCS7A01G569900 chr7D 631685452 631686442 990 False 512.500000 518 79.915500 1532 2522 2 chr7D.!!$F3 990
3 TraesCS7A01G569900 chr2B 6037423 6039620 2197 True 1393.000000 1393 78.279000 2023 4224 1 chr2B.!!$R1 2201
4 TraesCS7A01G569900 chr2B 6055748 6058626 2878 True 1019.000000 1919 75.520000 1638 4709 2 chr2B.!!$R2 3071
5 TraesCS7A01G569900 chr2B 6137085 6139542 2457 True 667.333333 1367 76.488667 1328 4224 3 chr2B.!!$R3 2896
6 TraesCS7A01G569900 chr4B 6039629 6042086 2457 False 1700.000000 1700 79.331000 1763 4223 1 chr4B.!!$F1 2460
7 TraesCS7A01G569900 chr4B 6055919 6058902 2983 False 772.666667 1548 75.497333 1088 4225 3 chr4B.!!$F2 3137
8 TraesCS7A01G569900 chr2D 2342127 2344598 2471 False 1661.000000 1661 79.027000 2315 4797 1 chr2D.!!$F1 2482
9 TraesCS7A01G569900 chr2D 12771358 12774501 3143 True 1458.000000 1458 75.405000 1623 4797 1 chr2D.!!$R1 3174
10 TraesCS7A01G569900 chr2D 5389491 5395739 6248 False 766.000000 1345 76.076000 1618 4224 2 chr2D.!!$F2 2606
11 TraesCS7A01G569900 chr3B 52890185 52892617 2432 True 1659.000000 1659 79.221000 2315 4750 1 chr3B.!!$R1 2435
12 TraesCS7A01G569900 chr2A 2334736 2337196 2460 False 1657.000000 1657 79.025000 2315 4797 1 chr2A.!!$F1 2482
13 TraesCS7A01G569900 chr2A 3975551 3978452 2901 False 1541.000000 1541 76.508000 1819 4742 1 chr2A.!!$F2 2923
14 TraesCS7A01G569900 chr2A 14918334 14921345 3011 True 1441.000000 1441 75.589000 1623 4647 1 chr2A.!!$R1 3024
15 TraesCS7A01G569900 chr2A 4038152 4040609 2457 False 865.000000 1395 76.906000 1328 4224 2 chr2A.!!$F3 2896
16 TraesCS7A01G569900 chrUn 93439369 93444326 4957 True 1259.000000 1491 96.483500 2056 4778 2 chrUn.!!$R1 2722

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
829 860 0.038744 ACTTGGAGCTGATTGGTGGG 59.961 55.000 0.00 0.0 0.00 4.61 F
1562 1608 0.033601 AACAACAACCTCACAGGCCA 60.034 50.000 5.01 0.0 39.63 5.36 F
1731 1777 0.179045 CGGCTACCTTGGGGAGATTG 60.179 60.000 0.00 0.0 36.25 2.67 F
1732 1778 0.183731 GGCTACCTTGGGGAGATTGG 59.816 60.000 0.00 0.0 36.25 3.16 F
1733 1779 0.919710 GCTACCTTGGGGAGATTGGT 59.080 55.000 0.00 0.0 36.25 3.67 F
1734 1780 1.285078 GCTACCTTGGGGAGATTGGTT 59.715 52.381 0.00 0.0 36.25 3.67 F
4188 8115 1.396653 ATATCACAAGGCTTGCTGGC 58.603 50.000 26.45 0.0 42.15 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1712 1758 0.179045 CAATCTCCCCAAGGTAGCCG 60.179 60.000 0.00 0.0 0.00 5.52 R
2461 3658 0.907486 CCATCCAGGTGCAAGAGAGA 59.093 55.000 0.00 0.0 0.00 3.10 R
3693 6999 1.064505 CCAATGCAATGTACCTCGCTG 59.935 52.381 0.21 0.0 0.00 5.18 R
4054 7360 3.513912 TCTCGGTGAACTATTGGTGATGT 59.486 43.478 0.00 0.0 0.00 3.06 R
4188 8115 3.084039 TGGAGCAAGATAGCCTTTTGTG 58.916 45.455 0.00 0.0 31.42 3.33 R
4304 8312 9.157259 GTTGCAATTAATTTTCATTGTTCACAC 57.843 29.630 0.59 0.0 33.58 3.82 R
5641 12742 0.034337 GGCAACAGTAACCGAGGTGA 59.966 55.000 0.00 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 2.653726 TGTGCATTATTGGTAGGGCAG 58.346 47.619 0.00 0.00 31.10 4.85
68 69 2.025416 TGTGCATTATTGGTAGGGCAGT 60.025 45.455 0.00 0.00 31.10 4.40
69 70 3.201045 TGTGCATTATTGGTAGGGCAGTA 59.799 43.478 0.00 0.00 31.10 2.74
70 71 3.815401 GTGCATTATTGGTAGGGCAGTAG 59.185 47.826 0.00 0.00 31.10 2.57
71 72 3.181445 TGCATTATTGGTAGGGCAGTAGG 60.181 47.826 0.00 0.00 0.00 3.18
72 73 3.181443 GCATTATTGGTAGGGCAGTAGGT 60.181 47.826 0.00 0.00 0.00 3.08
73 74 4.389374 CATTATTGGTAGGGCAGTAGGTG 58.611 47.826 0.00 0.00 0.00 4.00
74 75 1.213296 ATTGGTAGGGCAGTAGGTGG 58.787 55.000 0.00 0.00 0.00 4.61
80 81 3.077907 GGCAGTAGGTGGCCTCAA 58.922 61.111 3.32 0.00 46.23 3.02
81 82 1.609783 GGCAGTAGGTGGCCTCAAT 59.390 57.895 3.32 0.00 46.23 2.57
82 83 0.749454 GGCAGTAGGTGGCCTCAATG 60.749 60.000 3.32 0.00 46.23 2.82
83 84 0.253044 GCAGTAGGTGGCCTCAATGA 59.747 55.000 3.32 0.00 34.61 2.57
84 85 1.133976 GCAGTAGGTGGCCTCAATGAT 60.134 52.381 3.32 0.00 34.61 2.45
85 86 2.684927 GCAGTAGGTGGCCTCAATGATT 60.685 50.000 3.32 0.00 34.61 2.57
86 87 2.947652 CAGTAGGTGGCCTCAATGATTG 59.052 50.000 3.32 0.00 34.61 2.67
87 88 2.578021 AGTAGGTGGCCTCAATGATTGT 59.422 45.455 3.32 0.00 34.61 2.71
88 89 1.843368 AGGTGGCCTCAATGATTGTG 58.157 50.000 3.32 2.58 0.00 3.33
89 90 0.174162 GGTGGCCTCAATGATTGTGC 59.826 55.000 3.32 9.11 0.00 4.57
90 91 1.180029 GTGGCCTCAATGATTGTGCT 58.820 50.000 17.13 0.00 32.71 4.40
91 92 1.135199 GTGGCCTCAATGATTGTGCTG 60.135 52.381 17.13 2.17 32.71 4.41
92 93 1.180029 GGCCTCAATGATTGTGCTGT 58.820 50.000 17.13 0.00 32.71 4.40
93 94 1.547372 GGCCTCAATGATTGTGCTGTT 59.453 47.619 17.13 0.00 32.71 3.16
94 95 2.602878 GCCTCAATGATTGTGCTGTTG 58.397 47.619 4.93 0.00 0.00 3.33
95 96 2.673043 GCCTCAATGATTGTGCTGTTGG 60.673 50.000 4.93 0.00 0.00 3.77
96 97 2.559668 CCTCAATGATTGTGCTGTTGGT 59.440 45.455 4.93 0.00 0.00 3.67
97 98 3.366679 CCTCAATGATTGTGCTGTTGGTC 60.367 47.826 4.93 0.00 0.00 4.02
98 99 3.220940 TCAATGATTGTGCTGTTGGTCA 58.779 40.909 4.93 0.00 0.00 4.02
99 100 3.004629 TCAATGATTGTGCTGTTGGTCAC 59.995 43.478 4.93 0.00 0.00 3.67
100 101 2.049888 TGATTGTGCTGTTGGTCACA 57.950 45.000 0.00 0.00 40.98 3.58
101 102 1.675483 TGATTGTGCTGTTGGTCACAC 59.325 47.619 0.00 0.00 42.21 3.82
102 103 1.675483 GATTGTGCTGTTGGTCACACA 59.325 47.619 0.00 0.00 42.21 3.72
103 104 0.808125 TTGTGCTGTTGGTCACACAC 59.192 50.000 0.00 0.00 42.21 3.82
104 105 0.322008 TGTGCTGTTGGTCACACACA 60.322 50.000 0.00 0.00 41.31 3.72
105 106 0.098728 GTGCTGTTGGTCACACACAC 59.901 55.000 0.00 0.00 37.36 3.82
106 107 0.322008 TGCTGTTGGTCACACACACA 60.322 50.000 0.00 0.00 0.00 3.72
107 108 0.098728 GCTGTTGGTCACACACACAC 59.901 55.000 0.00 0.00 0.00 3.82
108 109 1.447945 CTGTTGGTCACACACACACA 58.552 50.000 0.00 0.00 0.00 3.72
109 110 1.130373 CTGTTGGTCACACACACACAC 59.870 52.381 0.00 0.00 0.00 3.82
110 111 1.160989 GTTGGTCACACACACACACA 58.839 50.000 0.00 0.00 0.00 3.72
161 162 1.612442 AGTACATGGCCCGTGGACT 60.612 57.895 15.49 15.49 39.48 3.85
169 170 2.584391 GCCCGTGGACTGAAGGAGT 61.584 63.158 0.00 0.00 37.76 3.85
209 210 1.358759 CGCAGTCCCACCAAAACAC 59.641 57.895 0.00 0.00 0.00 3.32
301 303 7.130917 TCATTTTGCAAAATTGTCGGAATTTG 58.869 30.769 30.13 17.90 36.52 2.32
400 403 4.010349 GGGCAGCAACTAGTAAGATTTGT 58.990 43.478 0.00 0.00 0.00 2.83
401 404 4.459337 GGGCAGCAACTAGTAAGATTTGTT 59.541 41.667 0.00 0.00 0.00 2.83
431 434 3.061965 TCATGTACGTTGCGTCAATCATG 59.938 43.478 0.00 15.33 41.54 3.07
432 435 2.409012 TGTACGTTGCGTCAATCATGT 58.591 42.857 0.00 0.00 41.54 3.21
480 483 4.422073 AGTTGGAAGTTGTGTGATGAGA 57.578 40.909 0.00 0.00 0.00 3.27
484 487 4.522114 TGGAAGTTGTGTGATGAGAACAA 58.478 39.130 0.00 0.00 0.00 2.83
509 512 0.107263 TGCCTGCTGTTTCTCACACA 60.107 50.000 0.00 0.00 0.00 3.72
510 513 0.308993 GCCTGCTGTTTCTCACACAC 59.691 55.000 0.00 0.00 0.00 3.82
551 554 9.419297 TGATATTTTATGGATGTTACGAGTAGC 57.581 33.333 0.00 0.00 0.00 3.58
553 556 2.795175 ATGGATGTTACGAGTAGCGG 57.205 50.000 0.00 0.00 46.49 5.52
554 557 1.753930 TGGATGTTACGAGTAGCGGA 58.246 50.000 0.00 0.00 46.49 5.54
555 558 2.093890 TGGATGTTACGAGTAGCGGAA 58.906 47.619 0.00 0.00 46.49 4.30
556 559 2.492881 TGGATGTTACGAGTAGCGGAAA 59.507 45.455 0.00 0.00 46.01 3.13
557 560 3.114065 GGATGTTACGAGTAGCGGAAAG 58.886 50.000 0.00 0.00 46.01 2.62
558 561 1.986698 TGTTACGAGTAGCGGAAAGC 58.013 50.000 0.00 0.00 46.01 3.51
618 639 1.429463 CGTGTCCCAGACAAACTAGC 58.571 55.000 0.00 0.00 44.49 3.42
758 789 3.344215 GGGCAGATCGCAGCATCG 61.344 66.667 10.82 0.00 45.17 3.84
803 834 2.425312 TGTGGCTTGAAAAACACACGAT 59.575 40.909 0.00 0.00 38.38 3.73
829 860 0.038744 ACTTGGAGCTGATTGGTGGG 59.961 55.000 0.00 0.00 0.00 4.61
945 976 4.142359 TGACTAGTCAAAGTGCTAGCTAGC 60.142 45.833 34.20 34.20 42.15 3.42
946 977 6.555152 TGACTAGTCAAAGTGCTAGCTAGCA 61.555 44.000 38.34 38.34 45.72 3.49
962 993 8.362860 CTAGCTAGCATGCATGTATATTAAGG 57.637 38.462 26.79 9.80 34.99 2.69
963 994 6.715280 AGCTAGCATGCATGTATATTAAGGT 58.285 36.000 26.79 15.34 34.99 3.50
964 995 6.596888 AGCTAGCATGCATGTATATTAAGGTG 59.403 38.462 26.79 8.62 34.99 4.00
966 997 6.808008 AGCATGCATGTATATTAAGGTGAC 57.192 37.500 26.79 5.87 0.00 3.67
967 998 6.298361 AGCATGCATGTATATTAAGGTGACA 58.702 36.000 26.79 0.00 0.00 3.58
968 999 6.205464 AGCATGCATGTATATTAAGGTGACAC 59.795 38.462 26.79 4.87 0.00 3.67
969 1000 6.568462 GCATGCATGTATATTAAGGTGACACC 60.568 42.308 26.79 17.43 38.99 4.16
970 1001 5.995446 TGCATGTATATTAAGGTGACACCA 58.005 37.500 26.30 6.49 41.95 4.17
971 1002 6.418946 TGCATGTATATTAAGGTGACACCAA 58.581 36.000 26.30 13.25 41.95 3.67
972 1003 6.542005 TGCATGTATATTAAGGTGACACCAAG 59.458 38.462 26.30 0.80 41.95 3.61
973 1004 6.542370 GCATGTATATTAAGGTGACACCAAGT 59.458 38.462 26.30 13.24 41.95 3.16
975 1006 8.956426 CATGTATATTAAGGTGACACCAAGTTT 58.044 33.333 26.30 13.91 41.95 2.66
976 1007 8.330466 TGTATATTAAGGTGACACCAAGTTTG 57.670 34.615 26.30 0.00 41.95 2.93
978 1009 5.767816 ATTAAGGTGACACCAAGTTTGAC 57.232 39.130 26.30 0.00 41.95 3.18
979 1010 2.799126 AGGTGACACCAAGTTTGACA 57.201 45.000 26.30 0.00 41.95 3.58
1071 1108 0.827925 TCCTACTAGCCTCGGCCATG 60.828 60.000 2.24 0.00 43.17 3.66
1133 1170 3.077359 CCTGGAAAGCCACACTAGAAAG 58.923 50.000 0.00 0.00 39.92 2.62
1251 1297 2.733945 GGGATCTCTCTGCGAGGC 59.266 66.667 5.87 0.00 40.30 4.70
1317 1363 1.471676 GCAACCCTGACGAGTATCCAG 60.472 57.143 0.00 0.00 0.00 3.86
1357 1403 0.542333 GGGCTCCTTACCACCTTCTC 59.458 60.000 0.00 0.00 0.00 2.87
1380 1426 1.135721 GCATCATCCTTGCCAAACCTC 59.864 52.381 0.00 0.00 33.95 3.85
1449 1495 2.683362 GCATGTAAAACACCTAGAGGGC 59.317 50.000 0.00 0.00 40.27 5.19
1528 1574 1.927895 CTACCTAAGGAAGCTGCGTG 58.072 55.000 0.00 0.00 0.00 5.34
1529 1575 0.108329 TACCTAAGGAAGCTGCGTGC 60.108 55.000 0.00 0.00 43.29 5.34
1562 1608 0.033601 AACAACAACCTCACAGGCCA 60.034 50.000 5.01 0.00 39.63 5.36
1574 1620 0.706433 ACAGGCCATGTCCCAAGAAT 59.294 50.000 5.01 0.00 37.75 2.40
1597 1643 5.890424 TTTAGGGAATTTAACCAAGCTCG 57.110 39.130 0.00 0.00 0.00 5.03
1611 1657 0.247736 AGCTCGCTAACTTGTCCCTG 59.752 55.000 0.00 0.00 0.00 4.45
1614 1660 1.192146 TCGCTAACTTGTCCCTGGCT 61.192 55.000 0.00 0.00 0.00 4.75
1615 1661 1.021390 CGCTAACTTGTCCCTGGCTG 61.021 60.000 0.00 0.00 0.00 4.85
1616 1662 0.324943 GCTAACTTGTCCCTGGCTGA 59.675 55.000 0.00 0.00 0.00 4.26
1617 1663 1.065126 GCTAACTTGTCCCTGGCTGAT 60.065 52.381 0.00 0.00 0.00 2.90
1618 1664 2.170607 GCTAACTTGTCCCTGGCTGATA 59.829 50.000 0.00 0.00 0.00 2.15
1619 1665 3.370527 GCTAACTTGTCCCTGGCTGATAA 60.371 47.826 0.00 0.00 0.00 1.75
1620 1666 2.789409 ACTTGTCCCTGGCTGATAAC 57.211 50.000 0.00 0.00 0.00 1.89
1621 1667 1.282157 ACTTGTCCCTGGCTGATAACC 59.718 52.381 0.00 0.00 0.00 2.85
1643 1689 7.264294 ACCAATTATCTGGATATCTTCCTCC 57.736 40.000 2.05 0.00 45.68 4.30
1653 1699 5.103043 TGGATATCTTCCTCCAGAACTAGGT 60.103 44.000 2.05 0.00 45.68 3.08
1654 1700 5.841783 GGATATCTTCCTCCAGAACTAGGTT 59.158 44.000 2.05 0.00 41.78 3.50
1659 1705 3.978610 TCCTCCAGAACTAGGTTACCTC 58.021 50.000 7.39 0.00 34.61 3.85
1660 1706 2.688958 CCTCCAGAACTAGGTTACCTCG 59.311 54.545 7.39 3.83 34.61 4.63
1661 1707 3.354467 CTCCAGAACTAGGTTACCTCGT 58.646 50.000 7.39 4.64 34.61 4.18
1662 1708 3.087031 TCCAGAACTAGGTTACCTCGTG 58.913 50.000 7.39 2.17 34.61 4.35
1666 1712 5.337330 CCAGAACTAGGTTACCTCGTGAATT 60.337 44.000 7.39 0.00 34.61 2.17
1668 1714 7.318141 CAGAACTAGGTTACCTCGTGAATTTA 58.682 38.462 7.39 0.00 34.61 1.40
1669 1715 7.275123 CAGAACTAGGTTACCTCGTGAATTTAC 59.725 40.741 7.39 0.00 34.61 2.01
1670 1716 5.644644 ACTAGGTTACCTCGTGAATTTACG 58.355 41.667 15.96 15.96 44.98 3.18
1679 1725 3.666274 TCGTGAATTTACGATGGTTGGT 58.334 40.909 20.12 0.00 46.94 3.67
1680 1726 4.066490 TCGTGAATTTACGATGGTTGGTT 58.934 39.130 20.12 0.00 46.94 3.67
1681 1727 4.152759 TCGTGAATTTACGATGGTTGGTTC 59.847 41.667 20.12 0.00 46.94 3.62
1682 1728 4.153475 CGTGAATTTACGATGGTTGGTTCT 59.847 41.667 17.02 0.00 46.46 3.01
1683 1729 5.334569 CGTGAATTTACGATGGTTGGTTCTT 60.335 40.000 17.02 0.00 46.46 2.52
1684 1730 6.128499 CGTGAATTTACGATGGTTGGTTCTTA 60.128 38.462 17.02 0.00 46.46 2.10
1685 1731 7.241376 GTGAATTTACGATGGTTGGTTCTTAG 58.759 38.462 0.00 0.00 0.00 2.18
1686 1732 6.938030 TGAATTTACGATGGTTGGTTCTTAGT 59.062 34.615 0.00 0.00 0.00 2.24
1687 1733 6.980051 ATTTACGATGGTTGGTTCTTAGTC 57.020 37.500 0.00 0.00 0.00 2.59
1688 1734 5.471556 TTACGATGGTTGGTTCTTAGTCA 57.528 39.130 0.00 0.00 0.00 3.41
1689 1735 4.345859 ACGATGGTTGGTTCTTAGTCAA 57.654 40.909 0.00 0.00 0.00 3.18
1690 1736 4.710324 ACGATGGTTGGTTCTTAGTCAAA 58.290 39.130 0.00 0.00 0.00 2.69
1691 1737 5.127491 ACGATGGTTGGTTCTTAGTCAAAA 58.873 37.500 0.00 0.00 0.00 2.44
1692 1738 5.008316 ACGATGGTTGGTTCTTAGTCAAAAC 59.992 40.000 0.00 0.00 0.00 2.43
1693 1739 5.008217 CGATGGTTGGTTCTTAGTCAAAACA 59.992 40.000 0.00 0.00 0.00 2.83
1694 1740 6.459024 CGATGGTTGGTTCTTAGTCAAAACAA 60.459 38.462 0.00 0.00 29.93 2.83
1695 1741 6.591750 TGGTTGGTTCTTAGTCAAAACAAA 57.408 33.333 0.00 0.00 34.11 2.83
1696 1742 6.391537 TGGTTGGTTCTTAGTCAAAACAAAC 58.608 36.000 0.00 0.00 39.65 2.93
1697 1743 6.209788 TGGTTGGTTCTTAGTCAAAACAAACT 59.790 34.615 2.98 0.00 39.85 2.66
1698 1744 6.750501 GGTTGGTTCTTAGTCAAAACAAACTC 59.249 38.462 5.10 0.00 36.93 3.01
1699 1745 7.309920 GTTGGTTCTTAGTCAAAACAAACTCA 58.690 34.615 0.00 0.00 34.11 3.41
1700 1746 7.639113 TGGTTCTTAGTCAAAACAAACTCAT 57.361 32.000 0.00 0.00 0.00 2.90
1701 1747 7.479980 TGGTTCTTAGTCAAAACAAACTCATG 58.520 34.615 0.00 0.00 0.00 3.07
1702 1748 6.918022 GGTTCTTAGTCAAAACAAACTCATGG 59.082 38.462 0.00 0.00 0.00 3.66
1703 1749 6.633500 TCTTAGTCAAAACAAACTCATGGG 57.367 37.500 0.00 0.00 0.00 4.00
1704 1750 6.126409 TCTTAGTCAAAACAAACTCATGGGT 58.874 36.000 0.00 0.00 0.00 4.51
1705 1751 6.605594 TCTTAGTCAAAACAAACTCATGGGTT 59.394 34.615 4.73 4.73 0.00 4.11
1706 1752 5.262588 AGTCAAAACAAACTCATGGGTTC 57.737 39.130 12.34 0.00 0.00 3.62
1707 1753 4.956075 AGTCAAAACAAACTCATGGGTTCT 59.044 37.500 12.34 0.00 0.00 3.01
1708 1754 6.126409 AGTCAAAACAAACTCATGGGTTCTA 58.874 36.000 12.34 0.00 0.00 2.10
1709 1755 6.777580 AGTCAAAACAAACTCATGGGTTCTAT 59.222 34.615 12.34 0.00 0.00 1.98
1710 1756 7.040409 AGTCAAAACAAACTCATGGGTTCTATC 60.040 37.037 12.34 0.00 0.00 2.08
1711 1757 6.208599 TCAAAACAAACTCATGGGTTCTATCC 59.791 38.462 12.34 0.00 0.00 2.59
1719 1765 2.056141 GGGTTCTATCCCGGCTACC 58.944 63.158 0.00 0.00 37.93 3.18
1720 1766 0.471401 GGGTTCTATCCCGGCTACCT 60.471 60.000 0.00 0.00 37.93 3.08
1721 1767 1.421480 GGTTCTATCCCGGCTACCTT 58.579 55.000 0.00 0.00 0.00 3.50
1722 1768 1.070289 GGTTCTATCCCGGCTACCTTG 59.930 57.143 0.00 0.00 0.00 3.61
1723 1769 1.070289 GTTCTATCCCGGCTACCTTGG 59.930 57.143 0.00 0.00 0.00 3.61
1724 1770 0.471211 TCTATCCCGGCTACCTTGGG 60.471 60.000 0.00 0.00 44.75 4.12
1725 1771 1.460689 TATCCCGGCTACCTTGGGG 60.461 63.158 0.00 0.00 43.50 4.96
1726 1772 4.014075 TCCCGGCTACCTTGGGGA 62.014 66.667 0.00 0.00 46.31 4.81
1727 1773 3.480133 CCCGGCTACCTTGGGGAG 61.480 72.222 0.00 0.00 42.59 4.30
1728 1774 2.365105 CCGGCTACCTTGGGGAGA 60.365 66.667 0.00 0.00 36.25 3.71
1729 1775 1.766461 CCGGCTACCTTGGGGAGAT 60.766 63.158 0.00 0.00 36.25 2.75
1730 1776 1.345715 CCGGCTACCTTGGGGAGATT 61.346 60.000 0.00 0.00 36.25 2.40
1731 1777 0.179045 CGGCTACCTTGGGGAGATTG 60.179 60.000 0.00 0.00 36.25 2.67
1732 1778 0.183731 GGCTACCTTGGGGAGATTGG 59.816 60.000 0.00 0.00 36.25 3.16
1733 1779 0.919710 GCTACCTTGGGGAGATTGGT 59.080 55.000 0.00 0.00 36.25 3.67
1734 1780 1.285078 GCTACCTTGGGGAGATTGGTT 59.715 52.381 0.00 0.00 36.25 3.67
1735 1781 2.508300 GCTACCTTGGGGAGATTGGTTA 59.492 50.000 0.00 0.00 36.25 2.85
1736 1782 3.053917 GCTACCTTGGGGAGATTGGTTAA 60.054 47.826 0.00 0.00 36.25 2.01
1737 1783 4.386424 GCTACCTTGGGGAGATTGGTTAAT 60.386 45.833 0.00 0.00 36.25 1.40
1738 1784 4.251103 ACCTTGGGGAGATTGGTTAATC 57.749 45.455 0.00 0.00 38.48 1.75
1752 1798 7.907214 ATTGGTTAATCTCACTGTCTTGTAC 57.093 36.000 0.00 0.00 0.00 2.90
1753 1799 5.790593 TGGTTAATCTCACTGTCTTGTACC 58.209 41.667 0.00 0.00 0.00 3.34
1754 1800 5.542635 TGGTTAATCTCACTGTCTTGTACCT 59.457 40.000 0.00 0.00 0.00 3.08
1755 1801 6.722590 TGGTTAATCTCACTGTCTTGTACCTA 59.277 38.462 0.00 0.00 0.00 3.08
1756 1802 7.399191 TGGTTAATCTCACTGTCTTGTACCTAT 59.601 37.037 0.00 0.00 0.00 2.57
1757 1803 8.910944 GGTTAATCTCACTGTCTTGTACCTATA 58.089 37.037 0.00 0.00 0.00 1.31
1785 1831 3.852578 ACCAACTTTCTGGACATATCCCT 59.147 43.478 0.00 0.00 45.59 4.20
1786 1832 4.080299 ACCAACTTTCTGGACATATCCCTC 60.080 45.833 0.00 0.00 45.59 4.30
1787 1833 4.080356 CCAACTTTCTGGACATATCCCTCA 60.080 45.833 0.00 0.00 45.59 3.86
1788 1834 5.121811 CAACTTTCTGGACATATCCCTCAG 58.878 45.833 0.00 0.00 45.59 3.35
1803 1849 3.032459 CCCTCAGGAACTAGGTTACCTC 58.968 54.545 7.39 0.00 36.02 3.85
1804 1850 2.688958 CCTCAGGAACTAGGTTACCTCG 59.311 54.545 7.39 3.83 36.02 4.63
1805 1851 3.354467 CTCAGGAACTAGGTTACCTCGT 58.646 50.000 7.39 4.64 36.02 4.18
1809 1855 3.509184 AGGAACTAGGTTACCTCGTGAAC 59.491 47.826 7.39 2.16 36.02 3.18
1810 1856 3.509184 GGAACTAGGTTACCTCGTGAACT 59.491 47.826 7.39 0.00 34.61 3.01
1812 1858 5.183904 GGAACTAGGTTACCTCGTGAACTTA 59.816 44.000 7.39 0.00 34.61 2.24
1813 1859 5.635417 ACTAGGTTACCTCGTGAACTTAC 57.365 43.478 7.39 0.00 34.61 2.34
1814 1860 5.072741 ACTAGGTTACCTCGTGAACTTACA 58.927 41.667 7.39 0.00 34.61 2.41
1815 1861 4.942761 AGGTTACCTCGTGAACTTACAA 57.057 40.909 0.00 0.00 0.00 2.41
1816 1862 4.879598 AGGTTACCTCGTGAACTTACAAG 58.120 43.478 0.00 0.00 0.00 3.16
1831 1877 9.199982 TGAACTTACAAGAGTTAGATTTTACCG 57.800 33.333 0.00 0.00 39.84 4.02
1851 1897 2.526873 AACGACCTCACAGGCCCT 60.527 61.111 0.00 0.00 39.63 5.19
1878 1924 8.141298 TCCCAAGAAATTTAGGGAATTTAACC 57.859 34.615 18.38 0.00 46.94 2.85
1972 2018 3.677156 ATTTAGGAGGGCTGCATCTTT 57.323 42.857 0.50 0.00 0.00 2.52
2044 2234 6.614694 TTAATCTCACCAGCTTGTACCTAA 57.385 37.500 0.00 0.00 0.00 2.69
2067 2401 3.442625 GGTATAACCAACTTTCTGGGCAC 59.557 47.826 0.00 0.00 41.16 5.01
2091 2425 3.883669 TCCTCGAGAACTAGGTTACCTC 58.116 50.000 15.71 0.00 34.61 3.85
2097 2431 4.437121 CGAGAACTAGGTTACCTCGTGAAG 60.437 50.000 7.39 1.31 36.13 3.02
2461 3658 4.405358 TGTTTGGAAATTTGACCAAGCTCT 59.595 37.500 19.44 0.00 45.08 4.09
3085 4282 7.593825 CCTAAGTGGTTCAATAAAAGGTTCAG 58.406 38.462 0.00 0.00 0.00 3.02
3198 4395 2.562738 ACAAGGCCTGTTGGATTTAAGC 59.437 45.455 5.69 0.00 32.99 3.09
4188 8115 1.396653 ATATCACAAGGCTTGCTGGC 58.603 50.000 26.45 0.00 42.15 4.85
4304 8312 6.757947 TGCATATGTCATATGTGATGTATCCG 59.242 38.462 26.39 4.88 43.52 4.18
4385 8409 1.334779 GCGTACACAGAGAACGTGACT 60.335 52.381 0.00 0.00 38.81 3.41
4752 8785 4.703897 ACGGATGATGAATTGGTATCGTT 58.296 39.130 0.00 0.00 0.00 3.85
4824 8857 7.584987 TGTTTAACTGATAAGAAAAGCAGAGC 58.415 34.615 0.00 0.00 32.86 4.09
4830 8863 0.398318 AAGAAAAGCAGAGCTCCGGT 59.602 50.000 10.93 2.08 38.25 5.28
4837 8870 0.737715 GCAGAGCTCCGGTGTTACAG 60.738 60.000 10.93 0.00 0.00 2.74
4896 8930 4.584327 ACTGGCGCTTCTTTTGTTAAAT 57.416 36.364 7.64 0.00 0.00 1.40
4947 8981 9.269415 GATTGTAATAAACGGTGTGATGTAAAC 57.731 33.333 0.00 0.00 0.00 2.01
4965 8999 9.099454 GATGTAAACCGATCTTGTTTATCTCTT 57.901 33.333 15.96 6.43 39.56 2.85
5016 10424 0.539518 TTAGCACTTAGGCATGCCGA 59.460 50.000 30.50 23.88 43.12 5.54
5034 10442 4.766404 CCGAAGTAAAGGCATTGTTTCT 57.234 40.909 0.00 0.00 0.00 2.52
5065 10473 8.100164 ACCTACCTAGTCTTCTTATACGGTATC 58.900 40.741 3.47 0.00 0.00 2.24
5095 10503 0.249615 CTCGCCGACACATCCATGAT 60.250 55.000 0.00 0.00 0.00 2.45
5096 10504 1.000274 CTCGCCGACACATCCATGATA 60.000 52.381 0.00 0.00 0.00 2.15
5105 10513 2.027377 CACATCCATGATAGGCTCCTCC 60.027 54.545 0.00 0.00 0.00 4.30
5149 10557 1.972872 CCCTTCACCCATGCTATCAC 58.027 55.000 0.00 0.00 0.00 3.06
5161 10569 1.135199 TGCTATCACCGAGAAACCGAC 60.135 52.381 0.00 0.00 0.00 4.79
5162 10570 1.135199 GCTATCACCGAGAAACCGACA 60.135 52.381 0.00 0.00 0.00 4.35
5167 10575 0.250166 ACCGAGAAACCGACAAAGGG 60.250 55.000 0.00 0.00 35.02 3.95
5275 10683 2.757099 CTGCAAGGATGGTGGCCC 60.757 66.667 0.00 0.00 0.00 5.80
5351 12423 2.047830 GGTGTGGGTAAGCTAGCCTAT 58.952 52.381 12.13 0.26 46.32 2.57
5352 12424 2.037381 GGTGTGGGTAAGCTAGCCTATC 59.963 54.545 12.13 2.51 46.32 2.08
5353 12425 2.698797 GTGTGGGTAAGCTAGCCTATCA 59.301 50.000 12.13 3.33 46.32 2.15
5354 12426 2.965831 TGTGGGTAAGCTAGCCTATCAG 59.034 50.000 12.13 0.00 46.32 2.90
5359 12431 2.831859 AGCTAGCCTATCAGCTGCA 58.168 52.632 12.13 0.00 46.21 4.41
5404 12505 2.074576 CCATCGAGCAATAGCATCCTG 58.925 52.381 0.00 0.00 45.49 3.86
5405 12506 2.549563 CCATCGAGCAATAGCATCCTGT 60.550 50.000 0.00 0.00 45.49 4.00
5412 12513 2.408050 CAATAGCATCCTGTAGACCGC 58.592 52.381 0.00 0.00 0.00 5.68
5462 12563 4.317444 CCGGCGGGTGGTGTAACA 62.317 66.667 20.56 0.00 39.98 2.41
5481 12582 1.201429 ATGGGGCTCTTTCTCACCGT 61.201 55.000 0.00 0.00 0.00 4.83
5562 12663 1.148310 GTAGCGTGCTCTGCTGAAAA 58.852 50.000 12.97 0.00 43.85 2.29
5563 12664 1.127582 GTAGCGTGCTCTGCTGAAAAG 59.872 52.381 12.97 0.00 43.85 2.27
5564 12665 1.441682 GCGTGCTCTGCTGAAAAGC 60.442 57.895 0.00 0.00 36.56 3.51
5565 12666 1.849976 GCGTGCTCTGCTGAAAAGCT 61.850 55.000 0.00 0.00 36.96 3.74
5566 12667 0.110328 CGTGCTCTGCTGAAAAGCTG 60.110 55.000 0.00 0.00 36.96 4.24
5567 12668 0.240411 GTGCTCTGCTGAAAAGCTGG 59.760 55.000 5.00 0.00 36.96 4.85
5568 12669 0.109153 TGCTCTGCTGAAAAGCTGGA 59.891 50.000 5.00 0.72 36.96 3.86
5569 12670 1.271762 TGCTCTGCTGAAAAGCTGGAT 60.272 47.619 5.00 0.00 36.96 3.41
5570 12671 1.132643 GCTCTGCTGAAAAGCTGGATG 59.867 52.381 5.00 0.00 35.00 3.51
5571 12672 1.132643 CTCTGCTGAAAAGCTGGATGC 59.867 52.381 5.00 0.00 43.29 3.91
5590 12691 2.365293 TGCTATCGTGGTGTGCATCTAT 59.635 45.455 0.00 0.00 0.00 1.98
5591 12692 2.733552 GCTATCGTGGTGTGCATCTATG 59.266 50.000 0.00 0.00 0.00 2.23
5592 12693 2.988010 ATCGTGGTGTGCATCTATGT 57.012 45.000 0.00 0.00 0.00 2.29
5593 12694 2.008752 TCGTGGTGTGCATCTATGTG 57.991 50.000 0.00 0.00 0.00 3.21
5594 12695 1.548269 TCGTGGTGTGCATCTATGTGA 59.452 47.619 0.00 0.00 0.00 3.58
5595 12696 1.660607 CGTGGTGTGCATCTATGTGAC 59.339 52.381 0.00 0.00 0.00 3.67
5596 12697 1.660607 GTGGTGTGCATCTATGTGACG 59.339 52.381 0.00 0.00 0.00 4.35
5597 12698 0.652592 GGTGTGCATCTATGTGACGC 59.347 55.000 0.00 0.00 34.02 5.19
5598 12699 0.652592 GTGTGCATCTATGTGACGCC 59.347 55.000 0.00 0.00 32.15 5.68
5599 12700 0.536724 TGTGCATCTATGTGACGCCT 59.463 50.000 0.00 0.00 32.15 5.52
5600 12701 0.933097 GTGCATCTATGTGACGCCTG 59.067 55.000 0.00 0.00 32.15 4.85
5601 12702 0.179076 TGCATCTATGTGACGCCTGG 60.179 55.000 0.00 0.00 32.15 4.45
5602 12703 0.179073 GCATCTATGTGACGCCTGGT 60.179 55.000 0.00 0.00 0.00 4.00
5603 12704 1.743772 GCATCTATGTGACGCCTGGTT 60.744 52.381 0.00 0.00 0.00 3.67
5604 12705 2.483013 GCATCTATGTGACGCCTGGTTA 60.483 50.000 0.00 0.00 0.00 2.85
5605 12706 3.792401 CATCTATGTGACGCCTGGTTAA 58.208 45.455 0.00 0.00 0.00 2.01
5606 12707 4.380531 CATCTATGTGACGCCTGGTTAAT 58.619 43.478 0.00 0.00 0.00 1.40
5607 12708 4.481368 TCTATGTGACGCCTGGTTAATT 57.519 40.909 0.00 0.00 0.00 1.40
5608 12709 5.601583 TCTATGTGACGCCTGGTTAATTA 57.398 39.130 0.00 0.00 0.00 1.40
5609 12710 5.979993 TCTATGTGACGCCTGGTTAATTAA 58.020 37.500 0.00 0.00 0.00 1.40
5610 12711 6.046593 TCTATGTGACGCCTGGTTAATTAAG 58.953 40.000 0.00 0.00 0.00 1.85
5611 12712 2.745281 TGTGACGCCTGGTTAATTAAGC 59.255 45.455 18.37 18.37 0.00 3.09
5612 12713 2.745281 GTGACGCCTGGTTAATTAAGCA 59.255 45.455 24.41 24.41 40.91 3.91
5613 12714 3.189702 GTGACGCCTGGTTAATTAAGCAA 59.810 43.478 25.52 11.18 42.33 3.91
5614 12715 4.013728 TGACGCCTGGTTAATTAAGCAAT 58.986 39.130 25.52 14.34 42.33 3.56
5615 12716 4.095782 TGACGCCTGGTTAATTAAGCAATC 59.904 41.667 25.52 20.19 42.33 2.67
5616 12717 3.064820 ACGCCTGGTTAATTAAGCAATCG 59.935 43.478 29.24 29.24 42.33 3.34
5617 12718 3.064820 CGCCTGGTTAATTAAGCAATCGT 59.935 43.478 25.52 0.00 42.33 3.73
5618 12719 4.271533 CGCCTGGTTAATTAAGCAATCGTA 59.728 41.667 25.52 7.02 42.33 3.43
5619 12720 5.220700 CGCCTGGTTAATTAAGCAATCGTAA 60.221 40.000 25.52 6.41 42.33 3.18
5620 12721 6.557110 GCCTGGTTAATTAAGCAATCGTAAA 58.443 36.000 25.52 5.79 42.33 2.01
5621 12722 6.471198 GCCTGGTTAATTAAGCAATCGTAAAC 59.529 38.462 25.52 9.48 42.33 2.01
5622 12723 6.970613 CCTGGTTAATTAAGCAATCGTAAACC 59.029 38.462 25.52 10.55 42.33 3.27
5623 12724 7.148137 CCTGGTTAATTAAGCAATCGTAAACCT 60.148 37.037 25.52 0.00 42.33 3.50
5624 12725 7.754625 TGGTTAATTAAGCAATCGTAAACCTC 58.245 34.615 23.99 0.00 40.31 3.85
5625 12726 7.608761 TGGTTAATTAAGCAATCGTAAACCTCT 59.391 33.333 23.99 0.00 40.31 3.69
5626 12727 7.908601 GGTTAATTAAGCAATCGTAAACCTCTG 59.091 37.037 19.87 0.00 34.08 3.35
5627 12728 4.939509 TTAAGCAATCGTAAACCTCTGC 57.060 40.909 0.00 0.00 0.00 4.26
5628 12729 2.770164 AGCAATCGTAAACCTCTGCT 57.230 45.000 0.00 0.00 35.38 4.24
5629 12730 3.887621 AGCAATCGTAAACCTCTGCTA 57.112 42.857 0.00 0.00 38.32 3.49
5630 12731 4.202245 AGCAATCGTAAACCTCTGCTAA 57.798 40.909 0.00 0.00 38.32 3.09
5631 12732 4.770795 AGCAATCGTAAACCTCTGCTAAT 58.229 39.130 0.00 0.00 38.32 1.73
5632 12733 4.572389 AGCAATCGTAAACCTCTGCTAATG 59.428 41.667 0.00 0.00 38.32 1.90
5633 12734 4.570772 GCAATCGTAAACCTCTGCTAATGA 59.429 41.667 0.00 0.00 0.00 2.57
5634 12735 5.237344 GCAATCGTAAACCTCTGCTAATGAT 59.763 40.000 0.00 0.00 0.00 2.45
5635 12736 6.653183 CAATCGTAAACCTCTGCTAATGATG 58.347 40.000 0.00 0.00 0.00 3.07
5636 12737 4.119862 TCGTAAACCTCTGCTAATGATGC 58.880 43.478 0.00 0.00 0.00 3.91
5637 12738 3.248602 CGTAAACCTCTGCTAATGATGCC 59.751 47.826 0.00 0.00 0.00 4.40
5638 12739 3.370840 AAACCTCTGCTAATGATGCCA 57.629 42.857 0.00 0.00 0.00 4.92
5639 12740 2.338577 ACCTCTGCTAATGATGCCAC 57.661 50.000 0.00 0.00 0.00 5.01
5640 12741 1.561076 ACCTCTGCTAATGATGCCACA 59.439 47.619 0.00 0.00 0.00 4.17
5641 12742 2.174210 ACCTCTGCTAATGATGCCACAT 59.826 45.455 0.00 0.00 0.00 3.21
5642 12743 2.812591 CCTCTGCTAATGATGCCACATC 59.187 50.000 0.55 0.55 0.00 3.06
5643 12744 3.473625 CTCTGCTAATGATGCCACATCA 58.526 45.455 12.30 12.30 0.00 3.07
5644 12745 3.208594 TCTGCTAATGATGCCACATCAC 58.791 45.455 12.18 1.37 0.00 3.06
5645 12746 2.292569 CTGCTAATGATGCCACATCACC 59.707 50.000 12.18 3.24 0.00 4.02
5646 12747 2.092267 TGCTAATGATGCCACATCACCT 60.092 45.455 12.18 5.95 0.00 4.00
5647 12748 2.551459 GCTAATGATGCCACATCACCTC 59.449 50.000 12.18 0.10 0.00 3.85
5648 12749 1.671979 AATGATGCCACATCACCTCG 58.328 50.000 12.18 0.00 0.00 4.63
5649 12750 0.179037 ATGATGCCACATCACCTCGG 60.179 55.000 12.18 0.00 0.00 4.63
5650 12751 1.221840 GATGCCACATCACCTCGGT 59.778 57.895 2.74 0.00 0.00 4.69
5651 12752 0.392998 GATGCCACATCACCTCGGTT 60.393 55.000 2.74 0.00 0.00 4.44
5652 12753 0.908910 ATGCCACATCACCTCGGTTA 59.091 50.000 0.00 0.00 0.00 2.85
5653 12754 0.036765 TGCCACATCACCTCGGTTAC 60.037 55.000 0.00 0.00 0.00 2.50
5654 12755 0.249398 GCCACATCACCTCGGTTACT 59.751 55.000 0.00 0.00 0.00 2.24
5655 12756 2.007049 GCCACATCACCTCGGTTACTG 61.007 57.143 0.00 0.00 0.00 2.74
5656 12757 1.275291 CCACATCACCTCGGTTACTGT 59.725 52.381 0.00 0.00 0.00 3.55
5657 12758 2.289444 CCACATCACCTCGGTTACTGTT 60.289 50.000 0.00 0.00 0.00 3.16
5658 12759 2.736721 CACATCACCTCGGTTACTGTTG 59.263 50.000 0.00 0.00 0.00 3.33
5659 12760 1.732259 CATCACCTCGGTTACTGTTGC 59.268 52.381 0.00 0.00 0.00 4.17
5660 12761 0.034337 TCACCTCGGTTACTGTTGCC 59.966 55.000 0.00 0.00 0.00 4.52
5661 12762 0.250124 CACCTCGGTTACTGTTGCCA 60.250 55.000 0.00 0.00 0.00 4.92
5662 12763 0.470766 ACCTCGGTTACTGTTGCCAA 59.529 50.000 0.00 0.00 0.00 4.52
5663 12764 1.073284 ACCTCGGTTACTGTTGCCAAT 59.927 47.619 0.00 0.00 0.00 3.16
5664 12765 1.737793 CCTCGGTTACTGTTGCCAATC 59.262 52.381 0.00 0.00 0.00 2.67
5665 12766 2.615493 CCTCGGTTACTGTTGCCAATCT 60.615 50.000 0.00 0.00 0.00 2.40
5666 12767 2.673368 CTCGGTTACTGTTGCCAATCTC 59.327 50.000 0.00 0.00 0.00 2.75
5667 12768 1.393539 CGGTTACTGTTGCCAATCTCG 59.606 52.381 0.00 0.00 0.00 4.04
5668 12769 1.130561 GGTTACTGTTGCCAATCTCGC 59.869 52.381 0.00 0.00 0.00 5.03
5669 12770 1.075542 TTACTGTTGCCAATCTCGCG 58.924 50.000 0.00 0.00 0.00 5.87
5670 12771 0.037697 TACTGTTGCCAATCTCGCGT 60.038 50.000 5.77 0.00 0.00 6.01
5671 12772 0.884704 ACTGTTGCCAATCTCGCGTT 60.885 50.000 5.77 0.00 0.00 4.84
5672 12773 1.075542 CTGTTGCCAATCTCGCGTTA 58.924 50.000 5.77 0.00 0.00 3.18
5673 12774 1.061131 CTGTTGCCAATCTCGCGTTAG 59.939 52.381 5.77 0.00 0.00 2.34
5674 12775 1.076332 GTTGCCAATCTCGCGTTAGT 58.924 50.000 5.77 0.00 0.00 2.24
5675 12776 1.463444 GTTGCCAATCTCGCGTTAGTT 59.537 47.619 5.77 0.00 0.00 2.24
5676 12777 1.355971 TGCCAATCTCGCGTTAGTTC 58.644 50.000 5.77 0.00 0.00 3.01
5677 12778 1.337354 TGCCAATCTCGCGTTAGTTCA 60.337 47.619 5.77 0.00 0.00 3.18
5678 12779 1.730064 GCCAATCTCGCGTTAGTTCAA 59.270 47.619 5.77 0.00 0.00 2.69
5679 12780 2.158841 GCCAATCTCGCGTTAGTTCAAA 59.841 45.455 5.77 0.00 0.00 2.69
5680 12781 3.364565 GCCAATCTCGCGTTAGTTCAAAA 60.365 43.478 5.77 0.00 0.00 2.44
5681 12782 4.148891 CCAATCTCGCGTTAGTTCAAAAC 58.851 43.478 5.77 0.00 0.00 2.43
5682 12783 4.148891 CAATCTCGCGTTAGTTCAAAACC 58.851 43.478 5.77 0.00 0.00 3.27
5683 12784 1.788308 TCTCGCGTTAGTTCAAAACCG 59.212 47.619 5.77 0.00 0.00 4.44
5684 12785 1.788308 CTCGCGTTAGTTCAAAACCGA 59.212 47.619 5.77 0.00 32.53 4.69
5685 12786 2.406130 TCGCGTTAGTTCAAAACCGAT 58.594 42.857 5.77 0.00 30.22 4.18
5686 12787 2.801679 TCGCGTTAGTTCAAAACCGATT 59.198 40.909 5.77 0.00 30.22 3.34
5687 12788 3.120923 TCGCGTTAGTTCAAAACCGATTC 60.121 43.478 5.77 0.00 30.22 2.52
5688 12789 3.363182 CGCGTTAGTTCAAAACCGATTCA 60.363 43.478 0.00 0.00 0.00 2.57
5689 12790 4.529446 GCGTTAGTTCAAAACCGATTCAA 58.471 39.130 0.00 0.00 0.00 2.69
5690 12791 4.971220 GCGTTAGTTCAAAACCGATTCAAA 59.029 37.500 0.00 0.00 0.00 2.69
5691 12792 5.627780 GCGTTAGTTCAAAACCGATTCAAAT 59.372 36.000 0.00 0.00 0.00 2.32
5692 12793 6.143278 GCGTTAGTTCAAAACCGATTCAAATT 59.857 34.615 0.00 0.00 0.00 1.82
5693 12794 7.616514 GCGTTAGTTCAAAACCGATTCAAATTC 60.617 37.037 0.00 0.00 0.00 2.17
5694 12795 7.377397 CGTTAGTTCAAAACCGATTCAAATTCA 59.623 33.333 0.00 0.00 0.00 2.57
5695 12796 9.026074 GTTAGTTCAAAACCGATTCAAATTCAA 57.974 29.630 0.00 0.00 0.00 2.69
5696 12797 9.587772 TTAGTTCAAAACCGATTCAAATTCAAA 57.412 25.926 0.00 0.00 0.00 2.69
5697 12798 8.661352 AGTTCAAAACCGATTCAAATTCAAAT 57.339 26.923 0.00 0.00 0.00 2.32
5698 12799 8.764287 AGTTCAAAACCGATTCAAATTCAAATC 58.236 29.630 0.00 3.70 0.00 2.17
5699 12800 8.764287 GTTCAAAACCGATTCAAATTCAAATCT 58.236 29.630 9.71 0.00 31.15 2.40
5700 12801 8.296799 TCAAAACCGATTCAAATTCAAATCTG 57.703 30.769 9.71 6.81 31.15 2.90
5701 12802 8.140628 TCAAAACCGATTCAAATTCAAATCTGA 58.859 29.630 9.61 5.18 31.15 3.27
5702 12803 8.763356 CAAAACCGATTCAAATTCAAATCTGAA 58.237 29.630 9.61 0.00 45.53 3.02
5715 12816 6.567687 TCAAATCTGAATTAAGGCAAACGA 57.432 33.333 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 2.684881 CACAATCATTGAGGCCACCTAC 59.315 50.000 5.01 0.00 31.76 3.18
68 69 2.945440 GCACAATCATTGAGGCCACCTA 60.945 50.000 5.01 0.00 31.76 3.08
69 70 1.843368 CACAATCATTGAGGCCACCT 58.157 50.000 5.01 0.00 36.03 4.00
70 71 0.174162 GCACAATCATTGAGGCCACC 59.826 55.000 5.01 0.00 0.00 4.61
71 72 1.135199 CAGCACAATCATTGAGGCCAC 60.135 52.381 5.01 0.00 35.95 5.01
72 73 1.179152 CAGCACAATCATTGAGGCCA 58.821 50.000 5.01 0.00 35.95 5.36
73 74 1.180029 ACAGCACAATCATTGAGGCC 58.820 50.000 3.79 0.00 35.95 5.19
74 75 2.602878 CAACAGCACAATCATTGAGGC 58.397 47.619 3.79 7.50 35.71 4.70
75 76 2.559668 ACCAACAGCACAATCATTGAGG 59.440 45.455 3.79 0.00 0.00 3.86
76 77 3.253921 TGACCAACAGCACAATCATTGAG 59.746 43.478 3.79 0.00 0.00 3.02
77 78 3.004629 GTGACCAACAGCACAATCATTGA 59.995 43.478 3.79 0.00 35.19 2.57
78 79 3.243468 TGTGACCAACAGCACAATCATTG 60.243 43.478 0.00 0.00 41.61 2.82
79 80 2.957680 TGTGACCAACAGCACAATCATT 59.042 40.909 0.00 0.00 41.61 2.57
80 81 2.294233 GTGTGACCAACAGCACAATCAT 59.706 45.455 0.00 0.00 45.53 2.45
81 82 1.675483 GTGTGACCAACAGCACAATCA 59.325 47.619 0.00 0.00 45.53 2.57
82 83 1.675483 TGTGTGACCAACAGCACAATC 59.325 47.619 0.00 0.00 45.53 2.67
83 84 1.405105 GTGTGTGACCAACAGCACAAT 59.595 47.619 0.00 0.00 45.53 2.71
84 85 0.808125 GTGTGTGACCAACAGCACAA 59.192 50.000 0.00 0.00 45.53 3.33
85 86 0.322008 TGTGTGTGACCAACAGCACA 60.322 50.000 0.00 0.00 42.88 4.57
86 87 0.098728 GTGTGTGTGACCAACAGCAC 59.901 55.000 0.00 0.00 40.26 4.40
87 88 0.322008 TGTGTGTGTGACCAACAGCA 60.322 50.000 0.00 0.00 40.26 4.41
88 89 0.098728 GTGTGTGTGTGACCAACAGC 59.901 55.000 0.00 0.00 40.26 4.40
89 90 1.130373 GTGTGTGTGTGTGACCAACAG 59.870 52.381 0.00 0.00 40.26 3.16
90 91 1.160989 GTGTGTGTGTGTGACCAACA 58.839 50.000 0.00 0.00 36.04 3.33
91 92 1.135803 GTGTGTGTGTGTGTGACCAAC 60.136 52.381 0.00 0.00 0.00 3.77
92 93 1.160989 GTGTGTGTGTGTGTGACCAA 58.839 50.000 0.00 0.00 0.00 3.67
93 94 0.035458 TGTGTGTGTGTGTGTGACCA 59.965 50.000 0.00 0.00 0.00 4.02
94 95 0.446222 GTGTGTGTGTGTGTGTGACC 59.554 55.000 0.00 0.00 0.00 4.02
95 96 1.136085 GTGTGTGTGTGTGTGTGTGAC 60.136 52.381 0.00 0.00 0.00 3.67
96 97 1.152510 GTGTGTGTGTGTGTGTGTGA 58.847 50.000 0.00 0.00 0.00 3.58
97 98 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
98 99 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
99 100 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
100 101 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
101 102 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
102 103 1.819928 ATGTGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
103 104 2.917701 AATGTGTGTGTGTGTGTGTG 57.082 45.000 0.00 0.00 0.00 3.82
104 105 3.753797 TGTTAATGTGTGTGTGTGTGTGT 59.246 39.130 0.00 0.00 0.00 3.72
105 106 4.348198 TGTTAATGTGTGTGTGTGTGTG 57.652 40.909 0.00 0.00 0.00 3.82
106 107 5.574891 AATGTTAATGTGTGTGTGTGTGT 57.425 34.783 0.00 0.00 0.00 3.72
107 108 7.647318 ACAATAATGTTAATGTGTGTGTGTGTG 59.353 33.333 0.00 0.00 35.91 3.82
108 109 7.711846 ACAATAATGTTAATGTGTGTGTGTGT 58.288 30.769 0.00 0.00 35.91 3.72
109 110 7.059374 CGACAATAATGTTAATGTGTGTGTGTG 59.941 37.037 0.00 0.00 40.74 3.82
110 111 7.075121 CGACAATAATGTTAATGTGTGTGTGT 58.925 34.615 0.00 0.00 40.74 3.72
161 162 1.345741 CTCTCACCAGCAACTCCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
227 229 4.445718 CGATCTACCGATTCCACTGATTTG 59.554 45.833 0.00 0.00 0.00 2.32
301 303 1.834188 TTTTCTTCGATTCCAGCCCC 58.166 50.000 0.00 0.00 0.00 5.80
378 381 4.010349 ACAAATCTTACTAGTTGCTGCCC 58.990 43.478 0.00 0.00 0.00 5.36
400 403 2.611971 GCAACGTACATGAGGAGACCAA 60.612 50.000 0.00 0.00 0.00 3.67
401 404 1.067142 GCAACGTACATGAGGAGACCA 60.067 52.381 0.00 0.00 0.00 4.02
431 434 9.287373 GCCCACTGGAGTAGAGTATATATATAC 57.713 40.741 20.81 20.81 39.01 1.47
432 435 9.010767 TGCCCACTGGAGTAGAGTATATATATA 57.989 37.037 0.00 0.00 0.00 0.86
480 483 0.471617 ACAGCAGGCAGAGTCTTGTT 59.528 50.000 0.00 0.00 0.00 2.83
484 487 1.001860 GAGAAACAGCAGGCAGAGTCT 59.998 52.381 0.00 0.00 0.00 3.24
551 554 1.515736 GTCGTCGGGTAGCTTTCCG 60.516 63.158 17.89 17.89 46.89 4.30
552 555 1.515736 CGTCGTCGGGTAGCTTTCC 60.516 63.158 0.00 0.00 0.00 3.13
553 556 0.796113 GTCGTCGTCGGGTAGCTTTC 60.796 60.000 1.55 0.00 37.69 2.62
554 557 1.211190 GTCGTCGTCGGGTAGCTTT 59.789 57.895 1.55 0.00 37.69 3.51
555 558 2.873288 GTCGTCGTCGGGTAGCTT 59.127 61.111 1.55 0.00 37.69 3.74
556 559 3.494336 CGTCGTCGTCGGGTAGCT 61.494 66.667 3.90 0.00 37.69 3.32
557 560 3.490759 TCGTCGTCGTCGGGTAGC 61.491 66.667 11.74 0.00 38.33 3.58
558 561 2.018582 GAGTCGTCGTCGTCGGGTAG 62.019 65.000 11.74 0.00 38.33 3.18
559 562 2.048222 AGTCGTCGTCGTCGGGTA 60.048 61.111 11.74 0.00 38.33 3.69
560 563 3.418068 GAGTCGTCGTCGTCGGGT 61.418 66.667 11.74 0.00 38.33 5.28
561 564 2.249557 ATTGAGTCGTCGTCGTCGGG 62.250 60.000 11.74 0.00 38.33 5.14
562 565 0.856490 GATTGAGTCGTCGTCGTCGG 60.856 60.000 11.74 0.00 38.33 4.79
563 566 0.856490 GGATTGAGTCGTCGTCGTCG 60.856 60.000 5.50 5.50 38.33 5.12
607 628 3.780626 ACTCCTACCTGCTAGTTTGTCT 58.219 45.455 0.00 0.00 0.00 3.41
638 659 6.879276 CATTGATGCTCACCAGAGAAATAT 57.121 37.500 0.00 0.00 44.98 1.28
803 834 1.557099 ATCAGCTCCAAGTACGTGGA 58.443 50.000 26.07 26.07 45.72 4.02
829 860 8.411683 CCAAACTATATATGTCCCGTAGTATCC 58.588 40.741 0.00 0.00 0.00 2.59
873 904 1.615107 GACTAGCACGCAACGTCCAC 61.615 60.000 0.00 0.00 38.32 4.02
945 976 6.486320 TGGTGTCACCTTAATATACATGCATG 59.514 38.462 25.09 25.09 39.58 4.06
946 977 6.600388 TGGTGTCACCTTAATATACATGCAT 58.400 36.000 22.56 0.00 39.58 3.96
948 979 6.542370 ACTTGGTGTCACCTTAATATACATGC 59.458 38.462 22.56 0.00 39.58 4.06
949 980 8.506168 AACTTGGTGTCACCTTAATATACATG 57.494 34.615 22.56 4.40 39.58 3.21
950 981 8.956426 CAAACTTGGTGTCACCTTAATATACAT 58.044 33.333 22.56 0.00 39.58 2.29
951 982 8.158132 TCAAACTTGGTGTCACCTTAATATACA 58.842 33.333 22.56 0.00 39.58 2.29
952 983 8.448615 GTCAAACTTGGTGTCACCTTAATATAC 58.551 37.037 22.56 9.96 39.58 1.47
953 984 8.158132 TGTCAAACTTGGTGTCACCTTAATATA 58.842 33.333 22.56 0.00 39.58 0.86
954 985 7.001674 TGTCAAACTTGGTGTCACCTTAATAT 58.998 34.615 22.56 2.63 39.58 1.28
956 987 5.197451 TGTCAAACTTGGTGTCACCTTAAT 58.803 37.500 22.56 4.52 39.58 1.40
957 988 4.590918 TGTCAAACTTGGTGTCACCTTAA 58.409 39.130 22.56 8.91 39.58 1.85
958 989 4.080807 TCTGTCAAACTTGGTGTCACCTTA 60.081 41.667 22.56 9.97 39.58 2.69
959 990 3.016736 CTGTCAAACTTGGTGTCACCTT 58.983 45.455 22.56 6.37 39.58 3.50
960 991 2.238646 TCTGTCAAACTTGGTGTCACCT 59.761 45.455 22.56 0.00 39.58 4.00
961 992 2.354821 GTCTGTCAAACTTGGTGTCACC 59.645 50.000 15.64 15.64 39.22 4.02
962 993 3.006940 TGTCTGTCAAACTTGGTGTCAC 58.993 45.455 0.00 0.00 0.00 3.67
963 994 3.006940 GTGTCTGTCAAACTTGGTGTCA 58.993 45.455 0.00 0.00 0.00 3.58
964 995 3.006940 TGTGTCTGTCAAACTTGGTGTC 58.993 45.455 0.00 0.00 0.00 3.67
966 997 3.181497 CCTTGTGTCTGTCAAACTTGGTG 60.181 47.826 0.00 0.00 0.00 4.17
967 998 3.016736 CCTTGTGTCTGTCAAACTTGGT 58.983 45.455 0.00 0.00 0.00 3.67
968 999 2.223572 GCCTTGTGTCTGTCAAACTTGG 60.224 50.000 0.00 0.00 0.00 3.61
969 1000 2.423185 TGCCTTGTGTCTGTCAAACTTG 59.577 45.455 0.00 0.00 0.00 3.16
970 1001 2.722094 TGCCTTGTGTCTGTCAAACTT 58.278 42.857 0.00 0.00 0.00 2.66
971 1002 2.418368 TGCCTTGTGTCTGTCAAACT 57.582 45.000 0.00 0.00 0.00 2.66
972 1003 3.563808 TGTATGCCTTGTGTCTGTCAAAC 59.436 43.478 0.00 0.00 0.00 2.93
973 1004 3.563808 GTGTATGCCTTGTGTCTGTCAAA 59.436 43.478 0.00 0.00 0.00 2.69
975 1006 2.368548 AGTGTATGCCTTGTGTCTGTCA 59.631 45.455 0.00 0.00 0.00 3.58
976 1007 3.045601 AGTGTATGCCTTGTGTCTGTC 57.954 47.619 0.00 0.00 0.00 3.51
978 1009 7.182361 CATAATAGTGTATGCCTTGTGTCTG 57.818 40.000 0.00 0.00 0.00 3.51
1081 1118 0.401738 CCTGCCTGTTCCTCCAAAGA 59.598 55.000 0.00 0.00 0.00 2.52
1133 1170 3.994853 GCAGTTGGGCTGGTTGGC 61.995 66.667 0.00 0.00 45.14 4.52
1251 1297 2.285668 TCCCCTCTGAGCCCCAAG 60.286 66.667 0.00 0.00 0.00 3.61
1357 1403 2.360165 GGTTTGGCAAGGATGATGCTAG 59.640 50.000 0.00 0.00 43.34 3.42
1432 1478 3.244805 ACAAGGCCCTCTAGGTGTTTTAC 60.245 47.826 0.00 0.00 38.26 2.01
1449 1495 1.213537 CAAATCCAGCGCCACAAGG 59.786 57.895 2.29 0.00 38.23 3.61
1528 1574 6.705825 AGGTTGTTGTTGGAAAAATCTAATGC 59.294 34.615 0.00 0.00 0.00 3.56
1529 1575 7.925483 TGAGGTTGTTGTTGGAAAAATCTAATG 59.075 33.333 0.00 0.00 0.00 1.90
1574 1620 5.336134 GCGAGCTTGGTTAAATTCCCTAAAA 60.336 40.000 2.37 0.00 0.00 1.52
1597 1643 0.324943 TCAGCCAGGGACAAGTTAGC 59.675 55.000 0.00 0.00 0.00 3.09
1611 1657 8.270744 AGATATCCAGATAATTGGTTATCAGCC 58.729 37.037 18.31 0.00 45.64 4.85
1643 1689 4.778534 TTCACGAGGTAACCTAGTTCTG 57.221 45.455 0.00 0.00 37.38 3.02
1659 1705 4.153475 AGAACCAACCATCGTAAATTCACG 59.847 41.667 0.00 0.00 43.28 4.35
1660 1706 5.622770 AGAACCAACCATCGTAAATTCAC 57.377 39.130 0.00 0.00 0.00 3.18
1661 1707 6.938030 ACTAAGAACCAACCATCGTAAATTCA 59.062 34.615 0.00 0.00 0.00 2.57
1662 1708 7.118680 TGACTAAGAACCAACCATCGTAAATTC 59.881 37.037 0.00 0.00 0.00 2.17
1666 1712 5.471556 TGACTAAGAACCAACCATCGTAA 57.528 39.130 0.00 0.00 0.00 3.18
1668 1714 4.345859 TTGACTAAGAACCAACCATCGT 57.654 40.909 0.00 0.00 0.00 3.73
1669 1715 5.008217 TGTTTTGACTAAGAACCAACCATCG 59.992 40.000 0.00 0.00 0.00 3.84
1670 1716 6.385649 TGTTTTGACTAAGAACCAACCATC 57.614 37.500 0.00 0.00 0.00 3.51
1673 1719 6.627243 AGTTTGTTTTGACTAAGAACCAACC 58.373 36.000 0.00 0.00 32.47 3.77
1674 1720 7.309920 TGAGTTTGTTTTGACTAAGAACCAAC 58.690 34.615 0.00 0.00 32.32 3.77
1675 1721 7.455641 TGAGTTTGTTTTGACTAAGAACCAA 57.544 32.000 0.00 0.00 0.00 3.67
1676 1722 7.416213 CCATGAGTTTGTTTTGACTAAGAACCA 60.416 37.037 0.00 0.00 0.00 3.67
1677 1723 6.918022 CCATGAGTTTGTTTTGACTAAGAACC 59.082 38.462 0.00 0.00 0.00 3.62
1678 1724 6.918022 CCCATGAGTTTGTTTTGACTAAGAAC 59.082 38.462 0.00 0.00 0.00 3.01
1679 1725 6.605594 ACCCATGAGTTTGTTTTGACTAAGAA 59.394 34.615 0.00 0.00 0.00 2.52
1680 1726 6.126409 ACCCATGAGTTTGTTTTGACTAAGA 58.874 36.000 0.00 0.00 0.00 2.10
1681 1727 6.391227 ACCCATGAGTTTGTTTTGACTAAG 57.609 37.500 0.00 0.00 0.00 2.18
1682 1728 6.605594 AGAACCCATGAGTTTGTTTTGACTAA 59.394 34.615 0.00 0.00 0.00 2.24
1683 1729 6.126409 AGAACCCATGAGTTTGTTTTGACTA 58.874 36.000 0.00 0.00 0.00 2.59
1684 1730 4.956075 AGAACCCATGAGTTTGTTTTGACT 59.044 37.500 0.00 0.00 0.00 3.41
1685 1731 5.262588 AGAACCCATGAGTTTGTTTTGAC 57.737 39.130 0.00 0.00 0.00 3.18
1686 1732 6.208599 GGATAGAACCCATGAGTTTGTTTTGA 59.791 38.462 0.00 0.00 0.00 2.69
1687 1733 6.389906 GGATAGAACCCATGAGTTTGTTTTG 58.610 40.000 0.00 0.00 0.00 2.44
1688 1734 6.590234 GGATAGAACCCATGAGTTTGTTTT 57.410 37.500 0.00 0.00 0.00 2.43
1701 1747 0.471401 AGGTAGCCGGGATAGAACCC 60.471 60.000 2.18 0.00 45.92 4.11
1702 1748 1.070289 CAAGGTAGCCGGGATAGAACC 59.930 57.143 2.18 0.00 0.00 3.62
1703 1749 1.070289 CCAAGGTAGCCGGGATAGAAC 59.930 57.143 2.18 0.00 0.00 3.01
1704 1750 1.420430 CCAAGGTAGCCGGGATAGAA 58.580 55.000 2.18 0.00 0.00 2.10
1705 1751 0.471211 CCCAAGGTAGCCGGGATAGA 60.471 60.000 10.87 0.00 43.21 1.98
1706 1752 1.481056 CCCCAAGGTAGCCGGGATAG 61.481 65.000 16.76 0.00 43.21 2.08
1707 1753 1.460689 CCCCAAGGTAGCCGGGATA 60.461 63.158 16.76 0.00 43.21 2.59
1708 1754 2.772622 CCCCAAGGTAGCCGGGAT 60.773 66.667 16.76 0.00 43.21 3.85
1709 1755 3.995809 CTCCCCAAGGTAGCCGGGA 62.996 68.421 16.76 13.56 43.21 5.14
1710 1756 3.480133 CTCCCCAAGGTAGCCGGG 61.480 72.222 2.18 9.60 39.92 5.73
1711 1757 1.345715 AATCTCCCCAAGGTAGCCGG 61.346 60.000 0.00 0.00 0.00 6.13
1712 1758 0.179045 CAATCTCCCCAAGGTAGCCG 60.179 60.000 0.00 0.00 0.00 5.52
1713 1759 0.183731 CCAATCTCCCCAAGGTAGCC 59.816 60.000 0.00 0.00 0.00 3.93
1714 1760 0.919710 ACCAATCTCCCCAAGGTAGC 59.080 55.000 0.00 0.00 0.00 3.58
1715 1761 4.855298 TTAACCAATCTCCCCAAGGTAG 57.145 45.455 0.00 0.00 31.10 3.18
1716 1762 5.043762 AGATTAACCAATCTCCCCAAGGTA 58.956 41.667 0.00 0.00 46.50 3.08
1717 1763 3.858638 AGATTAACCAATCTCCCCAAGGT 59.141 43.478 0.00 0.00 46.50 3.50
1718 1764 4.526438 AGATTAACCAATCTCCCCAAGG 57.474 45.455 0.00 0.00 46.50 3.61
1727 1773 7.064728 GGTACAAGACAGTGAGATTAACCAATC 59.935 40.741 0.00 0.00 40.85 2.67
1728 1774 6.879458 GGTACAAGACAGTGAGATTAACCAAT 59.121 38.462 0.00 0.00 0.00 3.16
1729 1775 6.042781 AGGTACAAGACAGTGAGATTAACCAA 59.957 38.462 0.00 0.00 0.00 3.67
1730 1776 5.542635 AGGTACAAGACAGTGAGATTAACCA 59.457 40.000 0.00 0.00 0.00 3.67
1731 1777 6.038997 AGGTACAAGACAGTGAGATTAACC 57.961 41.667 0.00 0.00 0.00 2.85
1757 1803 9.574516 GGATATGTCCAGAAAGTTGGTTATAAT 57.425 33.333 3.16 0.00 44.42 1.28
1758 1804 8.974060 GGATATGTCCAGAAAGTTGGTTATAA 57.026 34.615 3.16 0.00 44.42 0.98
1776 1822 4.561254 ACCTAGTTCCTGAGGGATATGT 57.439 45.455 0.00 0.00 41.87 2.29
1779 1825 4.485021 AGGTAACCTAGTTCCTGAGGGATA 59.515 45.833 0.00 0.00 34.89 2.59
1785 1831 3.087031 CACGAGGTAACCTAGTTCCTGA 58.913 50.000 0.00 0.00 37.38 3.86
1786 1832 3.087031 TCACGAGGTAACCTAGTTCCTG 58.913 50.000 0.00 0.00 37.38 3.86
1787 1833 3.446442 TCACGAGGTAACCTAGTTCCT 57.554 47.619 0.00 0.00 37.38 3.36
1788 1834 3.509184 AGTTCACGAGGTAACCTAGTTCC 59.491 47.826 0.00 0.00 37.38 3.62
1792 1838 5.633830 TGTAAGTTCACGAGGTAACCTAG 57.366 43.478 0.00 0.00 31.76 3.02
1797 1843 5.779529 ACTCTTGTAAGTTCACGAGGTAA 57.220 39.130 0.00 0.00 37.81 2.85
1805 1851 9.199982 CGGTAAAATCTAACTCTTGTAAGTTCA 57.800 33.333 0.00 0.00 40.01 3.18
1809 1855 6.592607 TGCCGGTAAAATCTAACTCTTGTAAG 59.407 38.462 1.90 0.00 0.00 2.34
1810 1856 6.465948 TGCCGGTAAAATCTAACTCTTGTAA 58.534 36.000 1.90 0.00 0.00 2.41
1812 1858 4.901868 TGCCGGTAAAATCTAACTCTTGT 58.098 39.130 1.90 0.00 0.00 3.16
1813 1859 5.628134 GTTGCCGGTAAAATCTAACTCTTG 58.372 41.667 6.53 0.00 0.00 3.02
1814 1860 4.390909 CGTTGCCGGTAAAATCTAACTCTT 59.609 41.667 6.53 0.00 0.00 2.85
1815 1861 3.930848 CGTTGCCGGTAAAATCTAACTCT 59.069 43.478 6.53 0.00 0.00 3.24
1816 1862 3.928375 TCGTTGCCGGTAAAATCTAACTC 59.072 43.478 6.53 0.00 33.95 3.01
1831 1877 3.050275 GCCTGTGAGGTCGTTGCC 61.050 66.667 0.00 0.00 37.80 4.52
1837 1883 1.411651 GGGATAGGGCCTGTGAGGTC 61.412 65.000 18.53 4.44 39.92 3.85
1878 1924 7.973388 TCACCAAGAAACAAGTTATTGAGTTTG 59.027 33.333 10.61 0.00 38.83 2.93
1972 2018 2.114616 ACCCATGAGTTTGTTTTGCCA 58.885 42.857 0.00 0.00 0.00 4.92
2044 2234 3.332485 TGCCCAGAAAGTTGGTTATACCT 59.668 43.478 0.00 0.00 39.58 3.08
2067 2401 4.645588 AGGTAACCTAGTTCTCGAGGAATG 59.354 45.833 13.56 0.00 38.48 2.67
2097 2431 9.997482 TTGTGTTGAAGTTCTAACTCAAATAAC 57.003 29.630 20.63 9.32 38.57 1.89
2461 3658 0.907486 CCATCCAGGTGCAAGAGAGA 59.093 55.000 0.00 0.00 0.00 3.10
2876 4073 4.127171 GAGCACCTTTAACTGAGACAACA 58.873 43.478 0.00 0.00 0.00 3.33
2878 4075 3.069016 TCGAGCACCTTTAACTGAGACAA 59.931 43.478 0.00 0.00 0.00 3.18
3085 4282 3.311966 GAAGCTTGAGGCAATGTTCAAC 58.688 45.455 2.10 0.00 44.79 3.18
3693 6999 1.064505 CCAATGCAATGTACCTCGCTG 59.935 52.381 0.21 0.00 0.00 5.18
4054 7360 3.513912 TCTCGGTGAACTATTGGTGATGT 59.486 43.478 0.00 0.00 0.00 3.06
4188 8115 3.084039 TGGAGCAAGATAGCCTTTTGTG 58.916 45.455 0.00 0.00 31.42 3.33
4304 8312 9.157259 GTTGCAATTAATTTTCATTGTTCACAC 57.843 29.630 0.59 0.00 33.58 3.82
4354 8378 0.171231 TGTGTACGCTAGCTCTGCAG 59.829 55.000 13.93 7.63 0.00 4.41
4385 8409 9.476202 CCGAAACTATATACATCACATTTCTCA 57.524 33.333 0.00 0.00 0.00 3.27
4752 8785 7.386848 GGTAGCATAGAAGAAACTACACACAAA 59.613 37.037 0.00 0.00 35.91 2.83
4809 8842 2.237392 ACCGGAGCTCTGCTTTTCTTAT 59.763 45.455 17.68 0.00 39.88 1.73
4824 8857 2.444421 AGTAGTCCTGTAACACCGGAG 58.556 52.381 9.46 1.26 31.99 4.63
4925 8959 6.242829 CGGTTTACATCACACCGTTTATTAC 58.757 40.000 1.74 0.00 46.90 1.89
5004 10412 2.639065 CCTTTACTTCGGCATGCCTAA 58.361 47.619 33.07 27.02 0.00 2.69
5016 10424 7.451566 AGGTTGATAGAAACAATGCCTTTACTT 59.548 33.333 0.00 0.00 0.00 2.24
5034 10442 9.499479 CGTATAAGAAGACTAGGTAGGTTGATA 57.501 37.037 0.00 0.00 0.00 2.15
5065 10473 1.820056 TCGGCGAGGTCTAGCTCTG 60.820 63.158 4.99 2.96 0.00 3.35
5129 10537 0.183492 TGATAGCATGGGTGAAGGGC 59.817 55.000 0.00 0.00 0.00 5.19
5149 10557 0.953960 CCCCTTTGTCGGTTTCTCGG 60.954 60.000 0.00 0.00 0.00 4.63
5161 10569 2.297033 CACAAGATGTGGTTCCCCTTTG 59.703 50.000 2.56 0.00 44.27 2.77
5162 10570 2.597455 CACAAGATGTGGTTCCCCTTT 58.403 47.619 2.56 0.00 44.27 3.11
5219 10627 4.557205 GTCAGGAGTCATACAACGAGTTT 58.443 43.478 0.00 0.00 0.00 2.66
5252 10660 1.471119 CACCATCCTTGCAGCTGATT 58.529 50.000 20.43 0.00 0.00 2.57
5298 10706 0.102120 CAGGAGGCGACAGTGAGATC 59.898 60.000 0.00 0.00 0.00 2.75
5351 12423 2.685017 AGGGGATCGTGCAGCTGA 60.685 61.111 20.43 0.00 0.00 4.26
5352 12424 2.513204 CAGGGGATCGTGCAGCTG 60.513 66.667 10.11 10.11 0.00 4.24
5353 12425 3.005539 ACAGGGGATCGTGCAGCT 61.006 61.111 0.00 0.00 32.46 4.24
5354 12426 2.599645 ATCACAGGGGATCGTGCAGC 62.600 60.000 0.00 0.00 33.03 5.25
5356 12428 1.264045 TGATCACAGGGGATCGTGCA 61.264 55.000 7.01 0.00 45.31 4.57
5359 12431 0.689080 AGCTGATCACAGGGGATCGT 60.689 55.000 7.01 0.00 45.31 3.73
5404 12505 2.092882 GGAGTGCAACGCGGTCTAC 61.093 63.158 12.47 4.93 45.86 2.59
5405 12506 1.884075 ATGGAGTGCAACGCGGTCTA 61.884 55.000 12.47 0.00 45.86 2.59
5412 12513 0.884259 TGTCACCATGGAGTGCAACG 60.884 55.000 21.47 0.00 45.86 4.10
5450 12551 1.680989 GCCCCATGTTACACCACCC 60.681 63.158 0.00 0.00 0.00 4.61
5453 12554 1.072266 AAGAGCCCCATGTTACACCA 58.928 50.000 0.00 0.00 0.00 4.17
5462 12563 1.201429 ACGGTGAGAAAGAGCCCCAT 61.201 55.000 0.00 0.00 0.00 4.00
5481 12582 2.363711 AAAGCCGTGCGTGAGACAGA 62.364 55.000 0.00 0.00 0.00 3.41
5527 12628 1.336887 GCTACTCGTGGTGTGTGACAT 60.337 52.381 0.00 0.00 0.00 3.06
5563 12664 0.179073 ACACCACGATAGCATCCAGC 60.179 55.000 0.00 0.00 46.19 4.85
5564 12665 1.575244 CACACCACGATAGCATCCAG 58.425 55.000 0.00 0.00 42.67 3.86
5565 12666 0.461870 GCACACCACGATAGCATCCA 60.462 55.000 0.00 0.00 42.67 3.41
5566 12667 0.461870 TGCACACCACGATAGCATCC 60.462 55.000 0.00 0.00 42.67 3.51
5567 12668 1.586422 ATGCACACCACGATAGCATC 58.414 50.000 0.00 0.00 41.70 3.91
5568 12669 3.786656 ATGCACACCACGATAGCAT 57.213 47.368 0.00 0.00 40.77 3.79
5569 12670 0.536724 AGATGCACACCACGATAGCA 59.463 50.000 0.00 0.00 42.67 3.49
5570 12671 2.509052 TAGATGCACACCACGATAGC 57.491 50.000 0.00 0.00 42.67 2.97
5571 12672 3.737774 CACATAGATGCACACCACGATAG 59.262 47.826 0.00 0.00 46.19 2.08
5572 12673 3.383185 TCACATAGATGCACACCACGATA 59.617 43.478 0.00 0.00 0.00 2.92
5573 12674 2.168313 TCACATAGATGCACACCACGAT 59.832 45.455 0.00 0.00 0.00 3.73
5574 12675 1.548269 TCACATAGATGCACACCACGA 59.452 47.619 0.00 0.00 0.00 4.35
5590 12691 2.745281 GCTTAATTAACCAGGCGTCACA 59.255 45.455 0.00 0.00 0.00 3.58
5591 12692 2.745281 TGCTTAATTAACCAGGCGTCAC 59.255 45.455 0.00 0.00 0.00 3.67
5592 12693 3.060736 TGCTTAATTAACCAGGCGTCA 57.939 42.857 0.00 0.00 0.00 4.35
5593 12694 4.598062 GATTGCTTAATTAACCAGGCGTC 58.402 43.478 0.00 0.00 0.00 5.19
5594 12695 3.064820 CGATTGCTTAATTAACCAGGCGT 59.935 43.478 0.00 0.00 0.00 5.68
5595 12696 3.064820 ACGATTGCTTAATTAACCAGGCG 59.935 43.478 12.00 12.00 0.00 5.52
5596 12697 4.632538 ACGATTGCTTAATTAACCAGGC 57.367 40.909 0.00 0.00 0.00 4.85
5597 12698 6.970613 GGTTTACGATTGCTTAATTAACCAGG 59.029 38.462 0.00 0.00 0.00 4.45
5598 12699 7.758495 AGGTTTACGATTGCTTAATTAACCAG 58.242 34.615 0.00 0.00 0.00 4.00
5599 12700 7.608761 AGAGGTTTACGATTGCTTAATTAACCA 59.391 33.333 0.00 0.00 0.00 3.67
5600 12701 7.908601 CAGAGGTTTACGATTGCTTAATTAACC 59.091 37.037 0.00 0.00 0.00 2.85
5601 12702 7.428472 GCAGAGGTTTACGATTGCTTAATTAAC 59.572 37.037 0.00 0.00 0.00 2.01
5602 12703 7.335924 AGCAGAGGTTTACGATTGCTTAATTAA 59.664 33.333 0.00 0.00 38.64 1.40
5603 12704 6.821665 AGCAGAGGTTTACGATTGCTTAATTA 59.178 34.615 0.00 0.00 38.64 1.40
5604 12705 5.648092 AGCAGAGGTTTACGATTGCTTAATT 59.352 36.000 0.00 0.00 38.64 1.40
5605 12706 5.186198 AGCAGAGGTTTACGATTGCTTAAT 58.814 37.500 0.00 0.00 38.64 1.40
5606 12707 4.575885 AGCAGAGGTTTACGATTGCTTAA 58.424 39.130 0.00 0.00 38.64 1.85
5607 12708 4.202245 AGCAGAGGTTTACGATTGCTTA 57.798 40.909 0.00 0.00 38.64 3.09
5608 12709 3.059352 AGCAGAGGTTTACGATTGCTT 57.941 42.857 0.00 0.00 38.64 3.91
5609 12710 2.770164 AGCAGAGGTTTACGATTGCT 57.230 45.000 0.00 0.00 37.09 3.91
5610 12711 4.570772 TCATTAGCAGAGGTTTACGATTGC 59.429 41.667 0.00 0.00 0.00 3.56
5611 12712 6.653183 CATCATTAGCAGAGGTTTACGATTG 58.347 40.000 0.00 0.00 0.00 2.67
5612 12713 5.237344 GCATCATTAGCAGAGGTTTACGATT 59.763 40.000 0.00 0.00 0.00 3.34
5613 12714 4.752101 GCATCATTAGCAGAGGTTTACGAT 59.248 41.667 0.00 0.00 0.00 3.73
5614 12715 4.119862 GCATCATTAGCAGAGGTTTACGA 58.880 43.478 0.00 0.00 0.00 3.43
5615 12716 3.248602 GGCATCATTAGCAGAGGTTTACG 59.751 47.826 0.00 0.00 0.00 3.18
5616 12717 4.035675 GTGGCATCATTAGCAGAGGTTTAC 59.964 45.833 0.00 0.00 0.00 2.01
5617 12718 4.199310 GTGGCATCATTAGCAGAGGTTTA 58.801 43.478 0.00 0.00 0.00 2.01
5618 12719 3.019564 GTGGCATCATTAGCAGAGGTTT 58.980 45.455 0.00 0.00 0.00 3.27
5619 12720 2.025981 TGTGGCATCATTAGCAGAGGTT 60.026 45.455 0.00 0.00 0.00 3.50
5620 12721 1.561076 TGTGGCATCATTAGCAGAGGT 59.439 47.619 0.00 0.00 0.00 3.85
5621 12722 2.336945 TGTGGCATCATTAGCAGAGG 57.663 50.000 0.00 0.00 0.00 3.69
5622 12723 3.250280 GTGATGTGGCATCATTAGCAGAG 59.750 47.826 13.88 0.00 0.00 3.35
5623 12724 3.208594 GTGATGTGGCATCATTAGCAGA 58.791 45.455 13.88 0.00 0.00 4.26
5624 12725 2.292569 GGTGATGTGGCATCATTAGCAG 59.707 50.000 13.88 0.00 33.88 4.24
5625 12726 2.092267 AGGTGATGTGGCATCATTAGCA 60.092 45.455 13.88 1.64 35.35 3.49
5626 12727 2.551459 GAGGTGATGTGGCATCATTAGC 59.449 50.000 13.88 12.57 33.88 3.09
5627 12728 2.804527 CGAGGTGATGTGGCATCATTAG 59.195 50.000 13.88 4.43 0.00 1.73
5628 12729 2.485302 CCGAGGTGATGTGGCATCATTA 60.485 50.000 13.88 0.00 0.00 1.90
5629 12730 1.671979 CGAGGTGATGTGGCATCATT 58.328 50.000 13.88 6.87 0.00 2.57
5630 12731 0.179037 CCGAGGTGATGTGGCATCAT 60.179 55.000 13.88 0.00 0.00 2.45
5631 12732 1.221566 CCGAGGTGATGTGGCATCA 59.778 57.895 7.63 7.63 0.00 3.07
5632 12733 0.392998 AACCGAGGTGATGTGGCATC 60.393 55.000 0.00 2.44 0.00 3.91
5633 12734 0.908910 TAACCGAGGTGATGTGGCAT 59.091 50.000 0.00 0.00 0.00 4.40
5634 12735 0.036765 GTAACCGAGGTGATGTGGCA 60.037 55.000 0.00 0.00 0.00 4.92
5635 12736 0.249398 AGTAACCGAGGTGATGTGGC 59.751 55.000 0.00 0.00 0.00 5.01
5636 12737 1.275291 ACAGTAACCGAGGTGATGTGG 59.725 52.381 0.00 0.00 0.00 4.17
5637 12738 2.736721 CAACAGTAACCGAGGTGATGTG 59.263 50.000 0.00 0.00 0.00 3.21
5638 12739 2.870435 GCAACAGTAACCGAGGTGATGT 60.870 50.000 0.00 0.00 0.00 3.06
5639 12740 1.732259 GCAACAGTAACCGAGGTGATG 59.268 52.381 0.00 0.00 0.00 3.07
5640 12741 1.338769 GGCAACAGTAACCGAGGTGAT 60.339 52.381 0.00 0.00 0.00 3.06
5641 12742 0.034337 GGCAACAGTAACCGAGGTGA 59.966 55.000 0.00 0.00 0.00 4.02
5642 12743 0.250124 TGGCAACAGTAACCGAGGTG 60.250 55.000 0.00 0.00 46.17 4.00
5643 12744 2.138595 TGGCAACAGTAACCGAGGT 58.861 52.632 0.00 0.00 46.17 3.85
5655 12756 1.076332 ACTAACGCGAGATTGGCAAC 58.924 50.000 15.93 0.00 0.00 4.17
5656 12757 1.730064 GAACTAACGCGAGATTGGCAA 59.270 47.619 15.93 0.68 0.00 4.52
5657 12758 1.337354 TGAACTAACGCGAGATTGGCA 60.337 47.619 15.93 0.00 0.00 4.92
5658 12759 1.355971 TGAACTAACGCGAGATTGGC 58.644 50.000 15.93 0.00 0.00 4.52
5659 12760 4.148891 GTTTTGAACTAACGCGAGATTGG 58.851 43.478 15.93 0.43 0.00 3.16
5660 12761 4.148891 GGTTTTGAACTAACGCGAGATTG 58.851 43.478 15.93 1.91 0.00 2.67
5661 12762 3.120786 CGGTTTTGAACTAACGCGAGATT 60.121 43.478 15.93 0.00 0.00 2.40
5662 12763 2.410730 CGGTTTTGAACTAACGCGAGAT 59.589 45.455 15.93 0.13 0.00 2.75
5663 12764 1.788308 CGGTTTTGAACTAACGCGAGA 59.212 47.619 15.93 0.00 0.00 4.04
5664 12765 1.788308 TCGGTTTTGAACTAACGCGAG 59.212 47.619 15.93 2.26 0.00 5.03
5665 12766 1.850377 TCGGTTTTGAACTAACGCGA 58.150 45.000 15.93 0.00 0.00 5.87
5666 12767 2.867456 ATCGGTTTTGAACTAACGCG 57.133 45.000 3.53 3.53 0.00 6.01
5667 12768 4.136517 TGAATCGGTTTTGAACTAACGC 57.863 40.909 0.00 0.00 0.00 4.84
5668 12769 7.377397 TGAATTTGAATCGGTTTTGAACTAACG 59.623 33.333 0.00 0.00 0.00 3.18
5669 12770 8.568732 TGAATTTGAATCGGTTTTGAACTAAC 57.431 30.769 0.00 0.00 0.00 2.34
5670 12771 9.587772 TTTGAATTTGAATCGGTTTTGAACTAA 57.412 25.926 0.00 0.00 0.00 2.24
5671 12772 9.757227 ATTTGAATTTGAATCGGTTTTGAACTA 57.243 25.926 0.00 0.00 0.00 2.24
5672 12773 8.661352 ATTTGAATTTGAATCGGTTTTGAACT 57.339 26.923 0.00 0.00 0.00 3.01
5673 12774 8.764287 AGATTTGAATTTGAATCGGTTTTGAAC 58.236 29.630 8.29 0.00 37.35 3.18
5674 12775 8.763356 CAGATTTGAATTTGAATCGGTTTTGAA 58.237 29.630 8.29 0.00 37.35 2.69
5675 12776 8.140628 TCAGATTTGAATTTGAATCGGTTTTGA 58.859 29.630 11.59 6.93 37.35 2.69
5676 12777 8.296799 TCAGATTTGAATTTGAATCGGTTTTG 57.703 30.769 11.59 5.42 37.35 2.44
5677 12778 8.885494 TTCAGATTTGAATTTGAATCGGTTTT 57.115 26.923 5.80 0.00 38.37 2.43
5691 12792 6.976088 TCGTTTGCCTTAATTCAGATTTGAA 58.024 32.000 0.54 0.54 46.67 2.69
5692 12793 6.567687 TCGTTTGCCTTAATTCAGATTTGA 57.432 33.333 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.